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Genes within 1Mb (chr12:89130345:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070961 ATP2B1 -578955 sc-eQTL 3.05e-01 0.0515 0.0501 0.306 B L1
ENSG00000139318 DUSP6 -222156 sc-eQTL 7.54e-01 -0.0214 0.068 0.306 B L1
ENSG00000139323 POC1B -395702 sc-eQTL 5.30e-01 -0.044 0.07 0.306 B L1
ENSG00000139324 TMTC3 988049 sc-eQTL 2.32e-01 0.111 0.0924 0.306 B L1
ENSG00000198707 CEP290 988257 sc-eQTL 1.29e-01 0.105 0.0691 0.306 B L1
ENSG00000257594 GALNT4 -394451 sc-eQTL 5.84e-01 0.0399 0.0729 0.306 B L1
ENSG00000258216 AC009522.1 -581703 sc-eQTL 7.48e-01 0.0252 0.0783 0.306 B L1
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 6.37e-02 -0.164 0.0879 0.306 B L1
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 1.55e-01 0.0944 0.0661 0.306 B L1
ENSG00000070961 ATP2B1 -578955 sc-eQTL 9.31e-01 0.00423 0.0489 0.306 CD4T L1
ENSG00000139318 DUSP6 -222156 sc-eQTL 6.15e-01 0.037 0.0735 0.306 CD4T L1
ENSG00000139323 POC1B -395702 sc-eQTL 3.71e-01 0.057 0.0635 0.306 CD4T L1
ENSG00000139324 TMTC3 988049 sc-eQTL 7.73e-01 -0.0196 0.0677 0.306 CD4T L1
ENSG00000198707 CEP290 988257 sc-eQTL 9.13e-01 0.00692 0.0635 0.306 CD4T L1
ENSG00000257594 GALNT4 -394451 sc-eQTL 5.79e-01 0.0391 0.0705 0.306 CD4T L1
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 5.77e-01 -0.045 0.0805 0.306 CD4T L1
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 2.49e-01 0.086 0.0744 0.306 CD4T L1
ENSG00000070961 ATP2B1 -578955 sc-eQTL 9.92e-01 -0.000614 0.0589 0.306 CD8T L1
ENSG00000139318 DUSP6 -222156 sc-eQTL 4.57e-01 -0.0516 0.0693 0.306 CD8T L1
ENSG00000139323 POC1B -395702 sc-eQTL 4.24e-01 0.0597 0.0745 0.306 CD8T L1
ENSG00000139324 TMTC3 988049 sc-eQTL 1.17e-01 0.139 0.0884 0.306 CD8T L1
ENSG00000198707 CEP290 988257 sc-eQTL 9.85e-01 0.00118 0.0629 0.306 CD8T L1
ENSG00000257594 GALNT4 -394451 sc-eQTL 9.19e-01 -0.00788 0.0771 0.306 CD8T L1
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 9.57e-01 0.00468 0.0869 0.306 CD8T L1
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 8.80e-01 0.0115 0.0762 0.306 CD8T L1
ENSG00000070961 ATP2B1 -578955 sc-eQTL 8.21e-01 -0.0157 0.0695 0.297 DC L1
ENSG00000139318 DUSP6 -222156 sc-eQTL 3.62e-02 0.132 0.0624 0.297 DC L1
ENSG00000139323 POC1B -395702 sc-eQTL 8.92e-01 -0.0137 0.1 0.297 DC L1
ENSG00000139324 TMTC3 988049 sc-eQTL 1.87e-01 0.119 0.0897 0.297 DC L1
ENSG00000198707 CEP290 988257 sc-eQTL 9.67e-01 0.00392 0.0961 0.297 DC L1
ENSG00000257594 GALNT4 -394451 sc-eQTL 1.28e-01 -0.148 0.0969 0.297 DC L1
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 3.58e-02 -0.187 0.0883 0.297 DC L1
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 5.68e-01 0.0381 0.0667 0.297 DC L1
ENSG00000274021 AC024909.1 -220670 sc-eQTL 7.03e-01 0.031 0.0813 0.297 DC L1
ENSG00000070961 ATP2B1 -578955 sc-eQTL 2.55e-01 0.0408 0.0358 0.306 Mono L1
ENSG00000139318 DUSP6 -222156 sc-eQTL 8.25e-04 0.201 0.0593 0.306 Mono L1
ENSG00000139323 POC1B -395702 sc-eQTL 1.05e-01 0.132 0.0809 0.306 Mono L1
ENSG00000198707 CEP290 988257 sc-eQTL 2.73e-01 -0.0814 0.0741 0.306 Mono L1
ENSG00000257594 GALNT4 -394451 sc-eQTL 6.51e-01 0.0331 0.0729 0.306 Mono L1
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 5.33e-01 0.0389 0.0623 0.306 Mono L1
ENSG00000274021 AC024909.1 -220670 sc-eQTL 2.26e-03 0.188 0.0607 0.306 Mono L1
ENSG00000070961 ATP2B1 -578955 sc-eQTL 4.34e-01 0.0497 0.0635 0.305 NK L1
ENSG00000139318 DUSP6 -222156 sc-eQTL 3.62e-01 0.0548 0.0599 0.305 NK L1
ENSG00000139323 POC1B -395702 sc-eQTL 2.41e-02 0.171 0.0751 0.305 NK L1
ENSG00000139324 TMTC3 988049 sc-eQTL 4.84e-01 -0.0616 0.0879 0.305 NK L1
ENSG00000198707 CEP290 988257 sc-eQTL 8.91e-01 -0.00975 0.0712 0.305 NK L1
ENSG00000257594 GALNT4 -394451 sc-eQTL 7.77e-01 0.0224 0.0791 0.305 NK L1
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 6.69e-01 0.0382 0.0891 0.305 NK L1
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 2.22e-02 0.197 0.0854 0.305 NK L1
ENSG00000274021 AC024909.1 -220670 sc-eQTL 4.76e-01 -0.0542 0.0759 0.305 NK L1
ENSG00000070961 ATP2B1 -578955 sc-eQTL 3.77e-02 0.161 0.0771 0.306 Other_T L1
ENSG00000139318 DUSP6 -222156 sc-eQTL 5.03e-01 0.0581 0.0865 0.306 Other_T L1
ENSG00000139323 POC1B -395702 sc-eQTL 7.69e-01 -0.0229 0.0779 0.306 Other_T L1
ENSG00000139324 TMTC3 988049 sc-eQTL 6.21e-01 0.0469 0.0946 0.306 Other_T L1
ENSG00000198707 CEP290 988257 sc-eQTL 6.19e-01 -0.0411 0.0825 0.306 Other_T L1
ENSG00000257594 GALNT4 -394451 sc-eQTL 8.52e-01 0.018 0.0967 0.306 Other_T L1
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 8.98e-01 -0.0116 0.0897 0.306 Other_T L1
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 5.02e-01 0.0586 0.0871 0.306 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070961 ATP2B1 -578955 sc-eQTL 7.63e-01 -0.029 0.0962 0.298 B_Activated L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 8.53e-01 0.0175 0.0941 0.298 B_Activated L2
ENSG00000139323 POC1B -395702 sc-eQTL 4.94e-01 0.075 0.11 0.298 B_Activated L2
ENSG00000139324 TMTC3 988049 sc-eQTL 1.71e-01 0.126 0.0916 0.298 B_Activated L2
ENSG00000198707 CEP290 988257 sc-eQTL 4.11e-01 -0.0879 0.107 0.298 B_Activated L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 4.75e-01 0.0697 0.0974 0.298 B_Activated L2
ENSG00000258216 AC009522.1 -581703 sc-eQTL 4.75e-01 0.0738 0.103 0.298 B_Activated L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 8.71e-01 -0.0137 0.084 0.298 B_Activated L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 2.22e-01 -0.139 0.113 0.298 B_Activated L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 6.17e-01 -0.0415 0.083 0.303 B_Intermediate L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 7.56e-01 0.0276 0.0885 0.303 B_Intermediate L2
ENSG00000139323 POC1B -395702 sc-eQTL 7.87e-01 0.0254 0.0938 0.303 B_Intermediate L2
ENSG00000139324 TMTC3 988049 sc-eQTL 2.20e-01 0.117 0.0947 0.303 B_Intermediate L2
ENSG00000198707 CEP290 988257 sc-eQTL 4.41e-01 0.067 0.0868 0.303 B_Intermediate L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 8.04e-02 0.154 0.0875 0.303 B_Intermediate L2
ENSG00000258216 AC009522.1 -581703 sc-eQTL 6.95e-01 0.033 0.0842 0.303 B_Intermediate L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 3.84e-01 -0.0854 0.0978 0.303 B_Intermediate L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 1.24e-02 0.189 0.075 0.303 B_Intermediate L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 1.67e-01 0.0956 0.069 0.306 B_Memory L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 5.77e-01 -0.0499 0.0892 0.306 B_Memory L2
ENSG00000139323 POC1B -395702 sc-eQTL 3.27e-01 0.0911 0.0928 0.306 B_Memory L2
ENSG00000139324 TMTC3 988049 sc-eQTL 5.05e-01 0.0632 0.0948 0.306 B_Memory L2
ENSG00000198707 CEP290 988257 sc-eQTL 3.09e-01 0.0994 0.0974 0.306 B_Memory L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 6.07e-01 0.0505 0.098 0.306 B_Memory L2
ENSG00000258216 AC009522.1 -581703 sc-eQTL 2.65e-01 0.11 0.0982 0.306 B_Memory L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 9.15e-01 0.00997 0.0927 0.306 B_Memory L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 2.20e-01 0.1 0.0817 0.306 B_Memory L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 4.48e-01 0.0468 0.0616 0.306 B_Naive1 L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 7.41e-01 -0.0248 0.0748 0.306 B_Naive1 L2
ENSG00000139323 POC1B -395702 sc-eQTL 9.57e-01 -0.00436 0.0798 0.306 B_Naive1 L2
ENSG00000139324 TMTC3 988049 sc-eQTL 5.55e-01 0.0555 0.0938 0.306 B_Naive1 L2
ENSG00000198707 CEP290 988257 sc-eQTL 5.75e-01 0.0471 0.0838 0.306 B_Naive1 L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 4.46e-01 -0.0614 0.0804 0.306 B_Naive1 L2
ENSG00000258216 AC009522.1 -581703 sc-eQTL 5.56e-01 0.0497 0.0844 0.306 B_Naive1 L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 1.01e-01 -0.145 0.088 0.306 B_Naive1 L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 6.48e-02 0.132 0.0711 0.306 B_Naive1 L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 8.54e-01 0.013 0.0705 0.305 B_Naive2 L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 2.75e-01 0.0961 0.0878 0.305 B_Naive2 L2
ENSG00000139323 POC1B -395702 sc-eQTL 2.49e-02 -0.201 0.089 0.305 B_Naive2 L2
ENSG00000139324 TMTC3 988049 sc-eQTL 9.32e-01 -0.00828 0.0965 0.305 B_Naive2 L2
ENSG00000198707 CEP290 988257 sc-eQTL 8.08e-01 0.0224 0.0918 0.305 B_Naive2 L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 7.02e-01 0.0354 0.0925 0.305 B_Naive2 L2
ENSG00000258216 AC009522.1 -581703 sc-eQTL 8.87e-01 -0.0134 0.0948 0.305 B_Naive2 L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 3.06e-01 0.0957 0.0933 0.305 B_Naive2 L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 4.79e-01 0.0628 0.0885 0.305 B_Naive2 L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 6.45e-02 0.167 0.0899 0.314 CD4_CTL L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 3.10e-01 -0.0899 0.0884 0.314 CD4_CTL L2
ENSG00000139323 POC1B -395702 sc-eQTL 7.35e-01 -0.0328 0.0969 0.314 CD4_CTL L2
ENSG00000139324 TMTC3 988049 sc-eQTL 9.67e-01 0.00378 0.0915 0.314 CD4_CTL L2
ENSG00000198707 CEP290 988257 sc-eQTL 8.40e-01 -0.0195 0.097 0.314 CD4_CTL L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 8.15e-01 -0.0201 0.0858 0.314 CD4_CTL L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 9.23e-01 0.00849 0.0878 0.314 CD4_CTL L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 5.68e-01 0.0572 0.0999 0.314 CD4_CTL L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 6.46e-01 0.0246 0.0534 0.306 CD4_Naive L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 7.15e-01 0.0299 0.082 0.306 CD4_Naive L2
ENSG00000139323 POC1B -395702 sc-eQTL 2.01e-01 0.0946 0.0738 0.306 CD4_Naive L2
ENSG00000139324 TMTC3 988049 sc-eQTL 7.73e-01 -0.0219 0.076 0.306 CD4_Naive L2
ENSG00000198707 CEP290 988257 sc-eQTL 5.05e-01 -0.0461 0.069 0.306 CD4_Naive L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 3.63e-01 0.0723 0.0793 0.306 CD4_Naive L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 2.19e-01 -0.101 0.0823 0.306 CD4_Naive L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 1.50e-01 0.102 0.0706 0.306 CD4_Naive L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 8.39e-01 -0.0118 0.0579 0.306 CD4_TCM L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 2.48e-01 0.0895 0.0772 0.306 CD4_TCM L2
ENSG00000139323 POC1B -395702 sc-eQTL 2.18e-02 -0.196 0.0847 0.306 CD4_TCM L2
ENSG00000139324 TMTC3 988049 sc-eQTL 5.74e-01 0.0502 0.0891 0.306 CD4_TCM L2
ENSG00000198707 CEP290 988257 sc-eQTL 6.34e-01 0.0364 0.0763 0.306 CD4_TCM L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 4.08e-01 0.0675 0.0814 0.306 CD4_TCM L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 7.29e-02 0.171 0.0946 0.306 CD4_TCM L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 4.90e-02 0.161 0.0815 0.306 CD4_TCM L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 6.56e-01 -0.0322 0.0724 0.306 CD4_TEM L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 9.87e-01 0.0014 0.0838 0.306 CD4_TEM L2
ENSG00000139323 POC1B -395702 sc-eQTL 2.05e-01 0.123 0.0971 0.306 CD4_TEM L2
ENSG00000139324 TMTC3 988049 sc-eQTL 4.64e-01 -0.0709 0.0966 0.306 CD4_TEM L2
ENSG00000198707 CEP290 988257 sc-eQTL 8.25e-01 -0.0203 0.0913 0.306 CD4_TEM L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 2.84e-02 -0.186 0.0843 0.306 CD4_TEM L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 7.63e-01 0.0281 0.0932 0.306 CD4_TEM L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 2.24e-01 0.108 0.0888 0.306 CD4_TEM L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 8.75e-01 0.0115 0.073 0.306 CD8_CTL L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 9.47e-02 -0.147 0.0877 0.306 CD8_CTL L2
ENSG00000139323 POC1B -395702 sc-eQTL 1.46e-01 0.129 0.0883 0.306 CD8_CTL L2
ENSG00000139324 TMTC3 988049 sc-eQTL 5.07e-01 -0.0609 0.0916 0.306 CD8_CTL L2
ENSG00000198707 CEP290 988257 sc-eQTL 2.48e-01 0.0969 0.0837 0.306 CD8_CTL L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 6.10e-01 0.0454 0.0889 0.306 CD8_CTL L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 9.52e-01 -0.00537 0.0894 0.306 CD8_CTL L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 3.54e-01 0.0821 0.0884 0.306 CD8_CTL L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 2.46e-01 -0.0879 0.0755 0.306 CD8_Naive L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 9.25e-01 0.0076 0.0811 0.306 CD8_Naive L2
ENSG00000139323 POC1B -395702 sc-eQTL 6.57e-01 0.0397 0.0893 0.306 CD8_Naive L2
ENSG00000139324 TMTC3 988049 sc-eQTL 7.96e-01 -0.0241 0.0932 0.306 CD8_Naive L2
ENSG00000198707 CEP290 988257 sc-eQTL 7.11e-01 -0.0301 0.0812 0.306 CD8_Naive L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 3.46e-01 -0.0841 0.089 0.306 CD8_Naive L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 4.21e-01 0.0733 0.091 0.306 CD8_Naive L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 7.91e-01 -0.0202 0.0761 0.306 CD8_Naive L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 9.48e-01 0.00531 0.0817 0.306 CD8_TCM L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 5.40e-01 0.0581 0.0947 0.306 CD8_TCM L2
ENSG00000139323 POC1B -395702 sc-eQTL 2.93e-01 0.105 0.0995 0.306 CD8_TCM L2
ENSG00000139324 TMTC3 988049 sc-eQTL 1.89e-02 0.225 0.0949 0.306 CD8_TCM L2
ENSG00000198707 CEP290 988257 sc-eQTL 4.55e-01 -0.071 0.0948 0.306 CD8_TCM L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 5.12e-01 -0.0577 0.0879 0.306 CD8_TCM L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 6.38e-01 0.0409 0.087 0.306 CD8_TCM L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 3.04e-01 0.0967 0.0939 0.306 CD8_TCM L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 5.47e-01 0.0594 0.0986 0.308 CD8_TEM L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 1.24e-01 -0.148 0.096 0.308 CD8_TEM L2
ENSG00000139323 POC1B -395702 sc-eQTL 7.73e-02 -0.174 0.0978 0.308 CD8_TEM L2
ENSG00000139324 TMTC3 988049 sc-eQTL 1.24e-01 0.146 0.0942 0.308 CD8_TEM L2
ENSG00000198707 CEP290 988257 sc-eQTL 7.01e-01 -0.0385 0.1 0.308 CD8_TEM L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 4.69e-01 -0.065 0.0896 0.308 CD8_TEM L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 9.22e-01 -0.00838 0.0852 0.308 CD8_TEM L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 4.87e-01 0.0687 0.0986 0.308 CD8_TEM L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 5.29e-02 0.155 0.0799 0.31 MAIT L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 8.74e-01 0.0141 0.089 0.31 MAIT L2
ENSG00000139323 POC1B -395702 sc-eQTL 5.53e-01 -0.055 0.0925 0.31 MAIT L2
ENSG00000139324 TMTC3 988049 sc-eQTL 8.09e-01 0.0226 0.0936 0.31 MAIT L2
ENSG00000198707 CEP290 988257 sc-eQTL 5.85e-01 -0.0489 0.0894 0.31 MAIT L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 7.14e-01 0.0333 0.0909 0.31 MAIT L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 7.82e-01 0.0251 0.0909 0.31 MAIT L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 9.30e-01 -0.0078 0.0888 0.31 MAIT L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 6.36e-01 -0.0392 0.0827 0.304 NK_CD56bright L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 4.20e-02 -0.177 0.0864 0.304 NK_CD56bright L2
ENSG00000139323 POC1B -395702 sc-eQTL 4.44e-01 0.0729 0.0951 0.304 NK_CD56bright L2
ENSG00000139324 TMTC3 988049 sc-eQTL 8.80e-01 0.0143 0.0944 0.304 NK_CD56bright L2
ENSG00000198707 CEP290 988257 sc-eQTL 3.21e-01 0.0939 0.0943 0.304 NK_CD56bright L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 1.12e-01 0.156 0.0975 0.304 NK_CD56bright L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 9.40e-01 -0.00696 0.0927 0.304 NK_CD56bright L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 3.88e-02 0.196 0.0942 0.304 NK_CD56bright L2
ENSG00000274021 AC024909.1 -220670 sc-eQTL 3.98e-01 -0.073 0.0862 0.304 NK_CD56bright L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 5.23e-01 0.0459 0.0717 0.306 NK_CD56dim L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 5.17e-01 0.043 0.0662 0.306 NK_CD56dim L2
ENSG00000139323 POC1B -395702 sc-eQTL 1.32e-02 0.204 0.0817 0.306 NK_CD56dim L2
ENSG00000139324 TMTC3 988049 sc-eQTL 7.31e-01 0.0324 0.0942 0.306 NK_CD56dim L2
ENSG00000198707 CEP290 988257 sc-eQTL 8.02e-01 0.0203 0.0808 0.306 NK_CD56dim L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 9.71e-01 0.00295 0.0821 0.306 NK_CD56dim L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 9.76e-01 0.00293 0.0961 0.306 NK_CD56dim L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 1.38e-01 0.135 0.0904 0.306 NK_CD56dim L2
ENSG00000274021 AC024909.1 -220670 sc-eQTL 4.63e-01 0.0592 0.0806 0.306 NK_CD56dim L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 1.34e-01 0.132 0.0876 0.306 NK_HLA L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 3.55e-01 0.0843 0.0908 0.306 NK_HLA L2
ENSG00000139323 POC1B -395702 sc-eQTL 1.87e-01 -0.135 0.102 0.306 NK_HLA L2
ENSG00000139324 TMTC3 988049 sc-eQTL 4.55e-01 -0.0678 0.0905 0.306 NK_HLA L2
ENSG00000198707 CEP290 988257 sc-eQTL 4.46e-01 0.0773 0.101 0.306 NK_HLA L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 9.07e-01 -0.0106 0.0907 0.306 NK_HLA L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 3.73e-02 0.183 0.0874 0.306 NK_HLA L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 1.25e-01 0.154 0.0998 0.306 NK_HLA L2
ENSG00000274021 AC024909.1 -220670 sc-eQTL 5.10e-01 -0.0514 0.0779 0.306 NK_HLA L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 2.34e-01 0.0903 0.0756 0.306 NK_cytokine L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 2.16e-01 0.0902 0.0727 0.306 NK_cytokine L2
ENSG00000139323 POC1B -395702 sc-eQTL 1.92e-02 0.204 0.0864 0.306 NK_cytokine L2
ENSG00000139324 TMTC3 988049 sc-eQTL 4.99e-01 -0.0614 0.0908 0.306 NK_cytokine L2
ENSG00000198707 CEP290 988257 sc-eQTL 4.27e-01 -0.0662 0.0832 0.306 NK_cytokine L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 7.76e-01 0.0253 0.0889 0.306 NK_cytokine L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 7.16e-01 -0.0317 0.0872 0.306 NK_cytokine L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 2.48e-02 0.203 0.09 0.306 NK_cytokine L2
ENSG00000274021 AC024909.1 -220670 sc-eQTL 6.89e-01 -0.0337 0.0841 0.306 NK_cytokine L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 1.87e-01 0.118 0.0887 0.296 PB L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 1.06e-01 -0.177 0.108 0.296 PB L2
ENSG00000139323 POC1B -395702 sc-eQTL 4.45e-01 0.0938 0.122 0.296 PB L2
ENSG00000139324 TMTC3 988049 sc-eQTL 5.62e-01 -0.0711 0.122 0.296 PB L2
ENSG00000198707 CEP290 988257 sc-eQTL 3.21e-01 -0.104 0.104 0.296 PB L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 4.71e-01 -0.0886 0.122 0.296 PB L2
ENSG00000258216 AC009522.1 -581703 sc-eQTL 7.34e-01 -0.0378 0.111 0.296 PB L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 1.13e-02 -0.267 0.104 0.296 PB L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 9.08e-01 0.0127 0.11 0.296 PB L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 1.84e-01 0.12 0.0903 0.307 Pro_T L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 4.19e-01 0.0715 0.0883 0.307 Pro_T L2
ENSG00000139323 POC1B -395702 sc-eQTL 2.48e-02 0.215 0.095 0.307 Pro_T L2
ENSG00000139324 TMTC3 988049 sc-eQTL 5.46e-01 0.0545 0.0902 0.307 Pro_T L2
ENSG00000198707 CEP290 988257 sc-eQTL 7.34e-02 0.169 0.0941 0.307 Pro_T L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 9.01e-01 -0.0114 0.0912 0.307 Pro_T L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 1.50e-01 -0.116 0.0801 0.307 Pro_T L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 7.46e-01 0.0312 0.0965 0.307 Pro_T L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 7.83e-01 0.0221 0.0803 0.306 Treg L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 3.46e-01 0.0838 0.0887 0.306 Treg L2
ENSG00000139323 POC1B -395702 sc-eQTL 5.10e-01 0.0664 0.101 0.306 Treg L2
ENSG00000139324 TMTC3 988049 sc-eQTL 8.99e-01 -0.0126 0.0988 0.306 Treg L2
ENSG00000198707 CEP290 988257 sc-eQTL 2.38e-02 0.214 0.0939 0.306 Treg L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 8.03e-01 -0.0234 0.0936 0.306 Treg L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 8.56e-01 0.0161 0.0884 0.306 Treg L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 5.96e-01 0.0457 0.0859 0.306 Treg L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 9.07e-01 -0.00853 0.0728 0.295 cDC L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 5.30e-02 0.137 0.0706 0.295 cDC L2
ENSG00000139323 POC1B -395702 sc-eQTL 8.21e-01 0.0244 0.108 0.295 cDC L2
ENSG00000139324 TMTC3 988049 sc-eQTL 6.96e-01 0.0361 0.0922 0.295 cDC L2
ENSG00000198707 CEP290 988257 sc-eQTL 3.53e-01 0.0988 0.106 0.295 cDC L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 1.27e-01 -0.152 0.0992 0.295 cDC L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 2.65e-01 -0.0919 0.0822 0.295 cDC L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 4.54e-01 -0.0604 0.0805 0.295 cDC L2
ENSG00000274021 AC024909.1 -220670 sc-eQTL 1.05e-01 0.142 0.0873 0.295 cDC L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 4.45e-01 0.0322 0.0421 0.306 cMono_IL1B L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 3.23e-02 0.138 0.064 0.306 cMono_IL1B L2
ENSG00000139323 POC1B -395702 sc-eQTL 1.46e-01 0.125 0.086 0.306 cMono_IL1B L2
ENSG00000198707 CEP290 988257 sc-eQTL 1.70e-01 -0.115 0.0832 0.306 cMono_IL1B L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 5.98e-01 0.0417 0.079 0.306 cMono_IL1B L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 9.07e-01 -0.00892 0.0762 0.306 cMono_IL1B L2
ENSG00000274021 AC024909.1 -220670 sc-eQTL 2.63e-02 0.149 0.0664 0.306 cMono_IL1B L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 3.60e-02 0.103 0.0486 0.306 cMono_S100A L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 2.24e-03 0.22 0.071 0.306 cMono_S100A L2
ENSG00000139323 POC1B -395702 sc-eQTL 3.76e-01 0.0838 0.0944 0.306 cMono_S100A L2
ENSG00000198707 CEP290 988257 sc-eQTL 8.43e-01 -0.0182 0.0914 0.306 cMono_S100A L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 6.87e-01 -0.0352 0.0871 0.306 cMono_S100A L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 5.63e-01 -0.0362 0.0626 0.306 cMono_S100A L2
ENSG00000274021 AC024909.1 -220670 sc-eQTL 1.11e-02 0.179 0.0699 0.306 cMono_S100A L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 2.70e-01 0.122 0.11 0.3 gdT L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 5.47e-01 0.0668 0.111 0.3 gdT L2
ENSG00000139323 POC1B -395702 sc-eQTL 9.71e-01 -0.00441 0.12 0.3 gdT L2
ENSG00000139324 TMTC3 988049 sc-eQTL 1.68e-01 0.153 0.11 0.3 gdT L2
ENSG00000198707 CEP290 988257 sc-eQTL 4.46e-02 -0.243 0.12 0.3 gdT L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 6.72e-01 -0.0486 0.115 0.3 gdT L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 2.37e-01 0.125 0.105 0.3 gdT L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 5.25e-01 0.0776 0.122 0.3 gdT L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 8.69e-01 0.00967 0.0584 0.302 intMono L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 1.99e-03 0.204 0.0653 0.302 intMono L2
ENSG00000139323 POC1B -395702 sc-eQTL 2.34e-01 0.119 0.0998 0.302 intMono L2
ENSG00000198707 CEP290 988257 sc-eQTL 4.70e-01 -0.0616 0.0851 0.302 intMono L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 1.33e-01 0.136 0.0905 0.302 intMono L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 8.18e-01 -0.0191 0.083 0.302 intMono L2
ENSG00000274021 AC024909.1 -220670 sc-eQTL 2.66e-01 0.0922 0.0826 0.302 intMono L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 5.83e-01 -0.0283 0.0515 0.303 ncMono L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 3.30e-03 0.213 0.0715 0.303 ncMono L2
ENSG00000139323 POC1B -395702 sc-eQTL 4.24e-01 -0.0731 0.0914 0.303 ncMono L2
ENSG00000198707 CEP290 988257 sc-eQTL 2.50e-01 -0.101 0.0879 0.303 ncMono L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 1.02e-01 0.157 0.0954 0.303 ncMono L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 2.66e-01 0.0848 0.076 0.303 ncMono L2
ENSG00000274021 AC024909.1 -220670 sc-eQTL 4.76e-01 0.0594 0.0831 0.303 ncMono L2
ENSG00000070961 ATP2B1 -578955 sc-eQTL 5.58e-01 -0.0502 0.0856 0.288 pDC L2
ENSG00000139318 DUSP6 -222156 sc-eQTL 1.28e-01 0.134 0.0875 0.288 pDC L2
ENSG00000139323 POC1B -395702 sc-eQTL 6.96e-01 0.0481 0.123 0.288 pDC L2
ENSG00000139324 TMTC3 988049 sc-eQTL 1.06e-01 0.158 0.0971 0.288 pDC L2
ENSG00000198707 CEP290 988257 sc-eQTL 8.92e-01 0.0156 0.114 0.288 pDC L2
ENSG00000257594 GALNT4 -394451 sc-eQTL 7.42e-01 -0.0361 0.11 0.288 pDC L2
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 7.22e-02 -0.176 0.0974 0.288 pDC L2
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 2.24e-01 0.0863 0.0706 0.288 pDC L2
ENSG00000274021 AC024909.1 -220670 sc-eQTL 3.38e-01 0.0838 0.0872 0.288 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070961 ATP2B1 -578955 sc-eQTL 5.81e-01 0.035 0.0634 0.306 B_Memory LOneK1K
ENSG00000139318 DUSP6 -222156 sc-eQTL 5.43e-01 0.0547 0.0898 0.306 B_Memory LOneK1K
ENSG00000139323 POC1B -395702 sc-eQTL 8.51e-01 -0.0164 0.0871 0.306 B_Memory LOneK1K
ENSG00000139324 TMTC3 988049 sc-eQTL 1.36e-02 0.238 0.0957 0.306 B_Memory LOneK1K
ENSG00000198707 CEP290 988257 sc-eQTL 2.73e-01 0.0891 0.0812 0.306 B_Memory LOneK1K
ENSG00000257594 GALNT4 -394451 sc-eQTL 1.14e-02 0.217 0.0848 0.306 B_Memory LOneK1K
ENSG00000258216 AC009522.1 -581703 sc-eQTL 7.10e-01 0.0324 0.0872 0.306 B_Memory LOneK1K
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 6.36e-01 -0.0466 0.0983 0.306 B_Memory LOneK1K
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 1.11e-01 0.108 0.0675 0.306 B_Memory LOneK1K
ENSG00000070961 ATP2B1 -578955 sc-eQTL 1.47e-01 0.0825 0.0566 0.306 B_Naive LOneK1K
ENSG00000139318 DUSP6 -222156 sc-eQTL 9.00e-01 -0.00892 0.0709 0.306 B_Naive LOneK1K
ENSG00000139323 POC1B -395702 sc-eQTL 1.42e-01 -0.109 0.0737 0.306 B_Naive LOneK1K
ENSG00000139324 TMTC3 988049 sc-eQTL 6.27e-01 0.0461 0.0948 0.306 B_Naive LOneK1K
ENSG00000198707 CEP290 988257 sc-eQTL 7.95e-01 0.0209 0.0803 0.306 B_Naive LOneK1K
ENSG00000257594 GALNT4 -394451 sc-eQTL 8.46e-01 -0.0153 0.0786 0.306 B_Naive LOneK1K
ENSG00000258216 AC009522.1 -581703 sc-eQTL 7.80e-01 0.0239 0.0854 0.306 B_Naive LOneK1K
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 1.14e-01 -0.142 0.0896 0.306 B_Naive LOneK1K
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 2.88e-02 0.149 0.0676 0.306 B_Naive LOneK1K
ENSG00000070961 ATP2B1 -578955 sc-eQTL 1.59e-01 0.0556 0.0394 0.306 CD14_Mono LOneK1K
ENSG00000139318 DUSP6 -222156 sc-eQTL 3.66e-03 0.185 0.0631 0.306 CD14_Mono LOneK1K
ENSG00000139323 POC1B -395702 sc-eQTL 1.24e-01 0.128 0.0827 0.306 CD14_Mono LOneK1K
ENSG00000198707 CEP290 988257 sc-eQTL 3.75e-01 -0.0731 0.0823 0.306 CD14_Mono LOneK1K
ENSG00000257594 GALNT4 -394451 sc-eQTL 8.62e-01 0.0132 0.0764 0.306 CD14_Mono LOneK1K
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 7.12e-01 0.0228 0.0616 0.306 CD14_Mono LOneK1K
ENSG00000274021 AC024909.1 -220670 sc-eQTL 2.02e-03 0.194 0.0619 0.306 CD14_Mono LOneK1K
ENSG00000070961 ATP2B1 -578955 sc-eQTL 8.55e-01 -0.00865 0.0474 0.302 CD16_Mono LOneK1K
ENSG00000139318 DUSP6 -222156 sc-eQTL 5.14e-04 0.206 0.0585 0.302 CD16_Mono LOneK1K
ENSG00000139323 POC1B -395702 sc-eQTL 8.83e-01 -0.0136 0.0921 0.302 CD16_Mono LOneK1K
ENSG00000198707 CEP290 988257 sc-eQTL 1.23e-01 -0.128 0.0827 0.302 CD16_Mono LOneK1K
ENSG00000257594 GALNT4 -394451 sc-eQTL 1.08e-02 0.226 0.0879 0.302 CD16_Mono LOneK1K
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 9.50e-01 0.00488 0.0783 0.302 CD16_Mono LOneK1K
ENSG00000274021 AC024909.1 -220670 sc-eQTL 3.44e-01 0.0723 0.0762 0.302 CD16_Mono LOneK1K
ENSG00000070961 ATP2B1 -578955 sc-eQTL 2.92e-01 0.0656 0.0621 0.306 NK_CD56dim LOneK1K
ENSG00000139318 DUSP6 -222156 sc-eQTL 2.66e-01 0.0672 0.0603 0.306 NK_CD56dim LOneK1K
ENSG00000139323 POC1B -395702 sc-eQTL 1.90e-02 0.183 0.0775 0.306 NK_CD56dim LOneK1K
ENSG00000139324 TMTC3 988049 sc-eQTL 5.75e-01 -0.0488 0.0868 0.306 NK_CD56dim LOneK1K
ENSG00000198707 CEP290 988257 sc-eQTL 7.35e-01 -0.0253 0.0748 0.306 NK_CD56dim LOneK1K
ENSG00000257594 GALNT4 -394451 sc-eQTL 8.04e-01 -0.0195 0.0785 0.306 NK_CD56dim LOneK1K
ENSG00000270344 POC1B-AS1 -394249 sc-eQTL 7.75e-01 0.0256 0.0896 0.306 NK_CD56dim LOneK1K
ENSG00000271614 ATP2B1-AS1 -578614 sc-eQTL 1.99e-02 0.199 0.0848 0.306 NK_CD56dim LOneK1K
ENSG00000274021 AC024909.1 -220670 sc-eQTL 7.61e-01 -0.0232 0.076 0.306 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139318 \N -222156 4.2e-06 4.6e-06 8.35e-07 2.94e-06 1.08e-06 1.33e-06 4.29e-06 9.93e-07 4.18e-06 2.01e-06 4.71e-06 2.94e-06 6.51e-06 1.88e-06 1.22e-06 2.66e-06 1.56e-06 2.94e-06 1.42e-06 9.89e-07 2.12e-06 3.79e-06 3.45e-06 1.63e-06 4.89e-06 1.28e-06 2.66e-06 1.44e-06 4.3e-06 3.53e-06 2.23e-06 5.58e-07 6.26e-07 1.76e-06 2.03e-06 9.61e-07 9.07e-07 4.24e-07 1.34e-06 4.18e-07 2.23e-07 4.74e-06 4.55e-07 1.64e-07 7.28e-07 4.11e-07 6.65e-07 5.05e-07 4.53e-07