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Genes within 1Mb (chr12:89057463:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070961 ATP2B1 -651837 sc-eQTL 3.08e-01 0.0983 0.0962 0.938 B L1
ENSG00000139318 DUSP6 -295038 sc-eQTL 6.83e-01 0.0535 0.131 0.938 B L1
ENSG00000139323 POC1B -468584 sc-eQTL 8.60e-01 0.0238 0.135 0.938 B L1
ENSG00000139324 TMTC3 915167 sc-eQTL 8.23e-02 -0.309 0.177 0.938 B L1
ENSG00000198707 CEP290 915375 sc-eQTL 1.57e-01 -0.189 0.133 0.938 B L1
ENSG00000257594 GALNT4 -467333 sc-eQTL 7.23e-01 0.0498 0.14 0.938 B L1
ENSG00000258216 AC009522.1 -654585 sc-eQTL 8.69e-01 -0.0249 0.15 0.938 B L1
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 7.70e-01 0.0499 0.17 0.938 B L1
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 5.19e-01 0.0823 0.127 0.938 B L1
ENSG00000070961 ATP2B1 -651837 sc-eQTL 3.20e-01 0.0951 0.0954 0.938 CD4T L1
ENSG00000139318 DUSP6 -295038 sc-eQTL 9.91e-01 0.00164 0.144 0.938 CD4T L1
ENSG00000139323 POC1B -468584 sc-eQTL 3.32e-02 -0.264 0.123 0.938 CD4T L1
ENSG00000139324 TMTC3 915167 sc-eQTL 7.81e-02 -0.233 0.131 0.938 CD4T L1
ENSG00000198707 CEP290 915375 sc-eQTL 7.52e-01 -0.0393 0.124 0.938 CD4T L1
ENSG00000257594 GALNT4 -467333 sc-eQTL 5.33e-01 -0.0861 0.138 0.938 CD4T L1
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 2.54e-01 0.18 0.157 0.938 CD4T L1
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 2.22e-01 -0.178 0.146 0.938 CD4T L1
ENSG00000070961 ATP2B1 -651837 sc-eQTL 1.14e-01 0.183 0.115 0.938 CD8T L1
ENSG00000139318 DUSP6 -295038 sc-eQTL 4.34e-01 0.107 0.137 0.938 CD8T L1
ENSG00000139323 POC1B -468584 sc-eQTL 9.32e-01 -0.0126 0.147 0.938 CD8T L1
ENSG00000139324 TMTC3 915167 sc-eQTL 4.22e-01 0.141 0.175 0.938 CD8T L1
ENSG00000198707 CEP290 915375 sc-eQTL 7.23e-01 -0.044 0.124 0.938 CD8T L1
ENSG00000257594 GALNT4 -467333 sc-eQTL 7.70e-01 0.0445 0.152 0.938 CD8T L1
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 8.60e-01 -0.0303 0.171 0.938 CD8T L1
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 9.22e-01 -0.0147 0.15 0.938 CD8T L1
ENSG00000070961 ATP2B1 -651837 sc-eQTL 3.68e-01 0.112 0.125 0.935 DC L1
ENSG00000139318 DUSP6 -295038 sc-eQTL 7.45e-01 0.0369 0.113 0.935 DC L1
ENSG00000139323 POC1B -468584 sc-eQTL 1.77e-01 0.243 0.18 0.935 DC L1
ENSG00000139324 TMTC3 915167 sc-eQTL 5.40e-01 0.0993 0.162 0.935 DC L1
ENSG00000198707 CEP290 915375 sc-eQTL 2.26e-01 0.209 0.172 0.935 DC L1
ENSG00000257594 GALNT4 -467333 sc-eQTL 6.78e-01 -0.0728 0.175 0.935 DC L1
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 4.36e-01 0.125 0.16 0.935 DC L1
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 8.45e-01 0.0235 0.12 0.935 DC L1
ENSG00000274021 AC024909.1 -293552 sc-eQTL 8.36e-01 -0.0302 0.146 0.935 DC L1
ENSG00000070961 ATP2B1 -651837 sc-eQTL 1.63e-01 0.0983 0.0703 0.938 Mono L1
ENSG00000139318 DUSP6 -295038 sc-eQTL 9.76e-01 -0.00354 0.12 0.938 Mono L1
ENSG00000139323 POC1B -468584 sc-eQTL 6.94e-01 -0.0631 0.16 0.938 Mono L1
ENSG00000198707 CEP290 915375 sc-eQTL 6.14e-01 -0.0738 0.146 0.938 Mono L1
ENSG00000257594 GALNT4 -467333 sc-eQTL 4.56e-01 0.107 0.143 0.938 Mono L1
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 3.98e-01 -0.104 0.122 0.938 Mono L1
ENSG00000274021 AC024909.1 -293552 sc-eQTL 2.97e-02 0.264 0.121 0.938 Mono L1
ENSG00000070961 ATP2B1 -651837 sc-eQTL 3.34e-01 0.12 0.124 0.938 NK L1
ENSG00000139318 DUSP6 -295038 sc-eQTL 7.73e-01 0.034 0.118 0.938 NK L1
ENSG00000139323 POC1B -468584 sc-eQTL 9.87e-01 -0.00245 0.149 0.938 NK L1
ENSG00000139324 TMTC3 915167 sc-eQTL 4.02e-01 -0.144 0.172 0.938 NK L1
ENSG00000198707 CEP290 915375 sc-eQTL 7.32e-01 0.0478 0.14 0.938 NK L1
ENSG00000257594 GALNT4 -467333 sc-eQTL 1.68e-03 0.482 0.152 0.938 NK L1
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 3.07e-01 0.179 0.174 0.938 NK L1
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 5.37e-01 0.105 0.169 0.938 NK L1
ENSG00000274021 AC024909.1 -293552 sc-eQTL 3.96e-01 0.126 0.149 0.938 NK L1
ENSG00000070961 ATP2B1 -651837 sc-eQTL 1.71e-01 0.201 0.146 0.938 Other_T L1
ENSG00000139318 DUSP6 -295038 sc-eQTL 2.09e-01 0.205 0.163 0.938 Other_T L1
ENSG00000139323 POC1B -468584 sc-eQTL 7.86e-01 0.04 0.147 0.938 Other_T L1
ENSG00000139324 TMTC3 915167 sc-eQTL 1.25e-01 -0.274 0.178 0.938 Other_T L1
ENSG00000198707 CEP290 915375 sc-eQTL 9.45e-01 0.0107 0.156 0.938 Other_T L1
ENSG00000257594 GALNT4 -467333 sc-eQTL 7.33e-01 -0.0622 0.182 0.938 Other_T L1
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 7.06e-01 -0.0641 0.169 0.938 Other_T L1
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 1.79e-01 -0.221 0.164 0.938 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070961 ATP2B1 -651837 sc-eQTL 3.04e-01 0.181 0.176 0.934 B_Activated L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 2.93e-01 0.181 0.172 0.934 B_Activated L2
ENSG00000139323 POC1B -468584 sc-eQTL 2.14e-01 0.25 0.2 0.934 B_Activated L2
ENSG00000139324 TMTC3 915167 sc-eQTL 9.53e-01 -0.00999 0.169 0.934 B_Activated L2
ENSG00000198707 CEP290 915375 sc-eQTL 5.11e-01 0.129 0.195 0.934 B_Activated L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 9.77e-01 -0.00526 0.179 0.934 B_Activated L2
ENSG00000258216 AC009522.1 -654585 sc-eQTL 4.26e-01 0.15 0.189 0.934 B_Activated L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 4.72e-01 -0.111 0.154 0.934 B_Activated L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 1.60e-01 0.292 0.207 0.934 B_Activated L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 4.31e-01 -0.123 0.156 0.938 B_Intermediate L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 5.78e-01 0.0928 0.167 0.938 B_Intermediate L2
ENSG00000139323 POC1B -468584 sc-eQTL 1.59e-01 0.249 0.176 0.938 B_Intermediate L2
ENSG00000139324 TMTC3 915167 sc-eQTL 3.73e-01 -0.16 0.179 0.938 B_Intermediate L2
ENSG00000198707 CEP290 915375 sc-eQTL 4.29e-01 -0.129 0.163 0.938 B_Intermediate L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 2.91e-01 -0.175 0.166 0.938 B_Intermediate L2
ENSG00000258216 AC009522.1 -654585 sc-eQTL 5.54e-01 -0.0939 0.159 0.938 B_Intermediate L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 8.71e-01 0.03 0.185 0.938 B_Intermediate L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 9.05e-01 0.0171 0.143 0.938 B_Intermediate L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 9.95e-01 -0.000789 0.129 0.938 B_Memory L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 3.08e-01 0.169 0.166 0.938 B_Memory L2
ENSG00000139323 POC1B -468584 sc-eQTL 8.67e-01 -0.029 0.173 0.938 B_Memory L2
ENSG00000139324 TMTC3 915167 sc-eQTL 9.41e-01 0.0131 0.176 0.938 B_Memory L2
ENSG00000198707 CEP290 915375 sc-eQTL 1.57e-01 -0.257 0.181 0.938 B_Memory L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 5.99e-01 0.0959 0.182 0.938 B_Memory L2
ENSG00000258216 AC009522.1 -654585 sc-eQTL 5.72e-01 -0.104 0.183 0.938 B_Memory L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 8.67e-01 0.0289 0.172 0.938 B_Memory L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 3.22e-01 -0.151 0.152 0.938 B_Memory L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 7.90e-01 -0.0314 0.118 0.938 B_Naive1 L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 9.86e-01 0.00253 0.143 0.938 B_Naive1 L2
ENSG00000139323 POC1B -468584 sc-eQTL 2.89e-01 -0.162 0.152 0.938 B_Naive1 L2
ENSG00000139324 TMTC3 915167 sc-eQTL 3.77e-01 -0.159 0.179 0.938 B_Naive1 L2
ENSG00000198707 CEP290 915375 sc-eQTL 7.21e-01 0.0574 0.16 0.938 B_Naive1 L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 7.58e-01 -0.0475 0.154 0.938 B_Naive1 L2
ENSG00000258216 AC009522.1 -654585 sc-eQTL 9.48e-01 0.0106 0.162 0.938 B_Naive1 L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 1.41e-01 0.249 0.169 0.938 B_Naive1 L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 3.74e-01 0.122 0.137 0.938 B_Naive1 L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 7.80e-01 -0.0372 0.133 0.938 B_Naive2 L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 2.79e-01 0.18 0.165 0.938 B_Naive2 L2
ENSG00000139323 POC1B -468584 sc-eQTL 7.28e-01 -0.0591 0.17 0.938 B_Naive2 L2
ENSG00000139324 TMTC3 915167 sc-eQTL 5.27e-02 -0.351 0.18 0.938 B_Naive2 L2
ENSG00000198707 CEP290 915375 sc-eQTL 1.71e-01 -0.236 0.172 0.938 B_Naive2 L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 9.58e-01 -0.00915 0.174 0.938 B_Naive2 L2
ENSG00000258216 AC009522.1 -654585 sc-eQTL 5.78e-01 -0.0993 0.178 0.938 B_Naive2 L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 4.49e-01 -0.133 0.176 0.938 B_Naive2 L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 6.26e-01 0.0814 0.167 0.938 B_Naive2 L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 5.84e-01 -0.094 0.172 0.936 CD4_CTL L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 6.66e-01 0.0724 0.168 0.936 CD4_CTL L2
ENSG00000139323 POC1B -468584 sc-eQTL 9.47e-01 0.0122 0.183 0.936 CD4_CTL L2
ENSG00000139324 TMTC3 915167 sc-eQTL 8.02e-01 -0.0435 0.173 0.936 CD4_CTL L2
ENSG00000198707 CEP290 915375 sc-eQTL 8.07e-01 0.045 0.183 0.936 CD4_CTL L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 3.16e-01 0.163 0.162 0.936 CD4_CTL L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 4.00e-01 0.14 0.166 0.936 CD4_CTL L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 6.42e-01 -0.0881 0.189 0.936 CD4_CTL L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 3.94e-01 0.0886 0.104 0.938 CD4_Naive L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 7.60e-01 -0.0487 0.159 0.938 CD4_Naive L2
ENSG00000139323 POC1B -468584 sc-eQTL 2.83e-02 -0.315 0.142 0.938 CD4_Naive L2
ENSG00000139324 TMTC3 915167 sc-eQTL 5.04e-01 -0.0988 0.148 0.938 CD4_Naive L2
ENSG00000198707 CEP290 915375 sc-eQTL 7.36e-01 0.0452 0.134 0.938 CD4_Naive L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 3.78e-01 -0.136 0.154 0.938 CD4_Naive L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 4.82e-02 0.316 0.159 0.938 CD4_Naive L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 2.76e-01 -0.15 0.138 0.938 CD4_Naive L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 6.33e-01 0.0539 0.113 0.938 CD4_TCM L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 4.11e-01 0.124 0.151 0.938 CD4_TCM L2
ENSG00000139323 POC1B -468584 sc-eQTL 9.69e-01 0.00642 0.167 0.938 CD4_TCM L2
ENSG00000139324 TMTC3 915167 sc-eQTL 6.87e-02 -0.316 0.172 0.938 CD4_TCM L2
ENSG00000198707 CEP290 915375 sc-eQTL 3.00e-01 -0.154 0.148 0.938 CD4_TCM L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 5.66e-01 0.0914 0.159 0.938 CD4_TCM L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 1.89e-02 -0.434 0.184 0.938 CD4_TCM L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 2.52e-01 -0.184 0.16 0.938 CD4_TCM L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 5.36e-02 0.27 0.139 0.938 CD4_TEM L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 4.88e-01 0.113 0.162 0.938 CD4_TEM L2
ENSG00000139323 POC1B -468584 sc-eQTL 7.44e-01 -0.0618 0.189 0.938 CD4_TEM L2
ENSG00000139324 TMTC3 915167 sc-eQTL 5.44e-01 -0.114 0.187 0.938 CD4_TEM L2
ENSG00000198707 CEP290 915375 sc-eQTL 7.59e-01 -0.0543 0.177 0.938 CD4_TEM L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 8.90e-01 0.0229 0.165 0.938 CD4_TEM L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 1.54e-01 0.257 0.18 0.938 CD4_TEM L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 5.01e-01 -0.116 0.173 0.938 CD4_TEM L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 5.46e-01 0.0846 0.14 0.938 CD8_CTL L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 4.87e-01 -0.118 0.169 0.938 CD8_CTL L2
ENSG00000139323 POC1B -468584 sc-eQTL 5.41e-01 -0.104 0.17 0.938 CD8_CTL L2
ENSG00000139324 TMTC3 915167 sc-eQTL 9.13e-01 -0.0191 0.176 0.938 CD8_CTL L2
ENSG00000198707 CEP290 915375 sc-eQTL 4.52e-01 0.121 0.161 0.938 CD8_CTL L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 8.49e-01 -0.0324 0.17 0.938 CD8_CTL L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 9.48e-01 -0.0112 0.171 0.938 CD8_CTL L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 1.29e-01 -0.257 0.169 0.938 CD8_CTL L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 8.04e-01 -0.0368 0.148 0.938 CD8_Naive L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 5.52e-02 0.303 0.157 0.938 CD8_Naive L2
ENSG00000139323 POC1B -468584 sc-eQTL 6.32e-01 -0.0838 0.175 0.938 CD8_Naive L2
ENSG00000139324 TMTC3 915167 sc-eQTL 9.64e-01 0.00833 0.182 0.938 CD8_Naive L2
ENSG00000198707 CEP290 915375 sc-eQTL 9.15e-01 -0.017 0.159 0.938 CD8_Naive L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 4.78e-01 0.124 0.174 0.938 CD8_Naive L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 3.85e-01 -0.155 0.178 0.938 CD8_Naive L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 7.81e-01 0.0414 0.149 0.938 CD8_Naive L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 8.37e-01 -0.0332 0.162 0.94 CD8_TCM L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 5.05e-01 0.125 0.187 0.94 CD8_TCM L2
ENSG00000139323 POC1B -468584 sc-eQTL 8.38e-01 -0.0403 0.197 0.94 CD8_TCM L2
ENSG00000139324 TMTC3 915167 sc-eQTL 4.42e-01 0.146 0.19 0.94 CD8_TCM L2
ENSG00000198707 CEP290 915375 sc-eQTL 1.62e-01 -0.262 0.187 0.94 CD8_TCM L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 7.87e-01 -0.047 0.174 0.94 CD8_TCM L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 1.10e-01 0.275 0.171 0.94 CD8_TCM L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 7.61e-01 0.0566 0.186 0.94 CD8_TCM L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 1.44e-01 0.268 0.183 0.938 CD8_TEM L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 9.31e-01 -0.0155 0.18 0.938 CD8_TEM L2
ENSG00000139323 POC1B -468584 sc-eQTL 2.56e-02 -0.408 0.181 0.938 CD8_TEM L2
ENSG00000139324 TMTC3 915167 sc-eQTL 2.09e-01 0.222 0.176 0.938 CD8_TEM L2
ENSG00000198707 CEP290 915375 sc-eQTL 3.00e-01 -0.194 0.186 0.938 CD8_TEM L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 7.85e-02 0.293 0.166 0.938 CD8_TEM L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 4.53e-01 -0.119 0.158 0.938 CD8_TEM L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 8.06e-01 -0.0452 0.184 0.938 CD8_TEM L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 2.57e-01 0.169 0.149 0.937 MAIT L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 3.30e-02 0.35 0.163 0.937 MAIT L2
ENSG00000139323 POC1B -468584 sc-eQTL 4.02e-01 -0.144 0.171 0.937 MAIT L2
ENSG00000139324 TMTC3 915167 sc-eQTL 2.67e-02 -0.383 0.172 0.937 MAIT L2
ENSG00000198707 CEP290 915375 sc-eQTL 7.47e-01 0.0536 0.166 0.937 MAIT L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 1.29e-01 -0.255 0.168 0.937 MAIT L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 4.33e-01 -0.132 0.168 0.937 MAIT L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 6.07e-01 -0.0847 0.165 0.937 MAIT L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 2.99e-01 0.162 0.155 0.938 NK_CD56bright L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 3.63e-01 0.149 0.164 0.938 NK_CD56bright L2
ENSG00000139323 POC1B -468584 sc-eQTL 5.34e-01 -0.111 0.179 0.938 NK_CD56bright L2
ENSG00000139324 TMTC3 915167 sc-eQTL 4.37e-01 -0.138 0.177 0.938 NK_CD56bright L2
ENSG00000198707 CEP290 915375 sc-eQTL 9.21e-01 -0.0178 0.178 0.938 NK_CD56bright L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 4.30e-02 0.372 0.183 0.938 NK_CD56bright L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 5.29e-01 0.11 0.174 0.938 NK_CD56bright L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 9.70e-01 -0.00672 0.179 0.938 NK_CD56bright L2
ENSG00000274021 AC024909.1 -293552 sc-eQTL 9.34e-01 0.0135 0.162 0.938 NK_CD56bright L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 9.53e-01 0.00819 0.14 0.938 NK_CD56dim L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 7.92e-01 0.0342 0.129 0.938 NK_CD56dim L2
ENSG00000139323 POC1B -468584 sc-eQTL 7.84e-01 0.0444 0.162 0.938 NK_CD56dim L2
ENSG00000139324 TMTC3 915167 sc-eQTL 8.49e-01 0.035 0.184 0.938 NK_CD56dim L2
ENSG00000198707 CEP290 915375 sc-eQTL 7.04e-01 0.0601 0.158 0.938 NK_CD56dim L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 8.41e-02 0.276 0.159 0.938 NK_CD56dim L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 9.34e-01 -0.0155 0.188 0.938 NK_CD56dim L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 4.31e-01 0.14 0.177 0.938 NK_CD56dim L2
ENSG00000274021 AC024909.1 -293552 sc-eQTL 7.49e-01 0.0505 0.158 0.938 NK_CD56dim L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 3.13e-02 0.368 0.17 0.936 NK_HLA L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 8.67e-01 0.0298 0.178 0.936 NK_HLA L2
ENSG00000139323 POC1B -468584 sc-eQTL 1.54e-01 -0.286 0.199 0.936 NK_HLA L2
ENSG00000139324 TMTC3 915167 sc-eQTL 4.31e-01 0.139 0.177 0.936 NK_HLA L2
ENSG00000198707 CEP290 915375 sc-eQTL 5.45e-01 -0.12 0.198 0.936 NK_HLA L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 3.16e-03 0.517 0.173 0.936 NK_HLA L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 6.75e-01 0.0725 0.172 0.936 NK_HLA L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 1.87e-01 0.259 0.195 0.936 NK_HLA L2
ENSG00000274021 AC024909.1 -293552 sc-eQTL 2.49e-01 0.175 0.152 0.936 NK_HLA L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 2.96e-01 0.153 0.146 0.938 NK_cytokine L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 2.88e-01 0.15 0.141 0.938 NK_cytokine L2
ENSG00000139323 POC1B -468584 sc-eQTL 8.98e-01 0.0216 0.169 0.938 NK_cytokine L2
ENSG00000139324 TMTC3 915167 sc-eQTL 1.10e-01 -0.28 0.175 0.938 NK_cytokine L2
ENSG00000198707 CEP290 915375 sc-eQTL 4.93e-01 0.11 0.161 0.938 NK_cytokine L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 1.73e-02 0.407 0.169 0.938 NK_cytokine L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 3.02e-01 0.174 0.168 0.938 NK_cytokine L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 7.91e-01 0.0467 0.176 0.938 NK_cytokine L2
ENSG00000274021 AC024909.1 -293552 sc-eQTL 3.90e-01 0.14 0.162 0.938 NK_cytokine L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 9.54e-01 -0.00975 0.167 0.937 PB L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 3.04e-01 0.211 0.204 0.937 PB L2
ENSG00000139323 POC1B -468584 sc-eQTL 3.43e-01 -0.218 0.228 0.937 PB L2
ENSG00000139324 TMTC3 915167 sc-eQTL 8.04e-01 0.057 0.229 0.937 PB L2
ENSG00000198707 CEP290 915375 sc-eQTL 2.09e-01 -0.246 0.195 0.937 PB L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 6.67e-01 0.0991 0.23 0.937 PB L2
ENSG00000258216 AC009522.1 -654585 sc-eQTL 8.14e-02 -0.36 0.205 0.937 PB L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 8.13e-01 0.0474 0.2 0.937 PB L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 7.23e-01 -0.0731 0.206 0.937 PB L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 5.83e-01 0.0982 0.179 0.941 Pro_T L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 6.28e-01 -0.0846 0.174 0.941 Pro_T L2
ENSG00000139323 POC1B -468584 sc-eQTL 3.20e-01 -0.188 0.189 0.941 Pro_T L2
ENSG00000139324 TMTC3 915167 sc-eQTL 8.06e-01 0.0439 0.178 0.941 Pro_T L2
ENSG00000198707 CEP290 915375 sc-eQTL 5.59e-01 -0.109 0.187 0.941 Pro_T L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 5.65e-01 0.104 0.18 0.941 Pro_T L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 4.50e-01 0.12 0.158 0.941 Pro_T L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 7.75e-01 0.0545 0.19 0.941 Pro_T L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 7.61e-01 0.0453 0.149 0.938 Treg L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 8.06e-01 0.0406 0.165 0.938 Treg L2
ENSG00000139323 POC1B -468584 sc-eQTL 2.08e-01 -0.236 0.187 0.938 Treg L2
ENSG00000139324 TMTC3 915167 sc-eQTL 9.36e-01 0.0147 0.184 0.938 Treg L2
ENSG00000198707 CEP290 915375 sc-eQTL 6.46e-01 -0.0813 0.177 0.938 Treg L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 1.98e-01 -0.224 0.173 0.938 Treg L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 5.05e-01 0.11 0.164 0.938 Treg L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 2.99e-01 -0.166 0.159 0.938 Treg L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 6.29e-01 -0.062 0.128 0.937 cDC L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 6.66e-01 0.0542 0.125 0.937 cDC L2
ENSG00000139323 POC1B -468584 sc-eQTL 3.54e-01 0.176 0.189 0.937 cDC L2
ENSG00000139324 TMTC3 915167 sc-eQTL 1.21e-01 0.251 0.161 0.937 cDC L2
ENSG00000198707 CEP290 915375 sc-eQTL 4.92e-01 0.129 0.187 0.937 cDC L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 5.63e-02 -0.334 0.174 0.937 cDC L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 2.48e-01 0.168 0.145 0.937 cDC L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 9.85e-01 0.00268 0.142 0.937 cDC L2
ENSG00000274021 AC024909.1 -293552 sc-eQTL 8.14e-01 -0.0365 0.155 0.937 cDC L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 4.59e-02 0.163 0.0811 0.938 cMono_IL1B L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 8.23e-01 0.0282 0.126 0.938 cMono_IL1B L2
ENSG00000139323 POC1B -468584 sc-eQTL 7.67e-01 -0.0499 0.168 0.938 cMono_IL1B L2
ENSG00000198707 CEP290 915375 sc-eQTL 5.92e-01 -0.0871 0.162 0.938 cMono_IL1B L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 3.01e-01 0.159 0.153 0.938 cMono_IL1B L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 3.07e-01 -0.151 0.148 0.938 cMono_IL1B L2
ENSG00000274021 AC024909.1 -293552 sc-eQTL 1.53e-02 0.315 0.129 0.938 cMono_IL1B L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 2.60e-02 0.21 0.0936 0.938 cMono_S100A L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 3.35e-01 0.135 0.14 0.938 cMono_S100A L2
ENSG00000139323 POC1B -468584 sc-eQTL 4.06e-01 0.152 0.182 0.938 cMono_S100A L2
ENSG00000198707 CEP290 915375 sc-eQTL 5.98e-01 -0.093 0.176 0.938 cMono_S100A L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 3.73e-01 -0.15 0.168 0.938 cMono_S100A L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 7.91e-01 -0.0321 0.121 0.938 cMono_S100A L2
ENSG00000274021 AC024909.1 -293552 sc-eQTL 9.52e-01 0.00824 0.137 0.938 cMono_S100A L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 4.14e-02 0.43 0.209 0.936 gdT L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 1.68e-02 0.505 0.209 0.936 gdT L2
ENSG00000139323 POC1B -468584 sc-eQTL 9.52e-01 -0.014 0.23 0.936 gdT L2
ENSG00000139324 TMTC3 915167 sc-eQTL 3.94e-01 0.182 0.213 0.936 gdT L2
ENSG00000198707 CEP290 915375 sc-eQTL 8.79e-01 0.0356 0.233 0.936 gdT L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 7.68e-02 0.388 0.218 0.936 gdT L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 6.99e-01 0.0785 0.202 0.936 gdT L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 7.52e-01 0.0743 0.234 0.936 gdT L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 7.55e-01 0.0354 0.113 0.938 intMono L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 8.52e-01 0.0241 0.129 0.938 intMono L2
ENSG00000139323 POC1B -468584 sc-eQTL 5.12e-01 -0.127 0.194 0.938 intMono L2
ENSG00000198707 CEP290 915375 sc-eQTL 6.22e-01 0.0813 0.165 0.938 intMono L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 8.24e-01 -0.0393 0.176 0.938 intMono L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 7.61e-01 0.0489 0.161 0.938 intMono L2
ENSG00000274021 AC024909.1 -293552 sc-eQTL 8.67e-01 0.0269 0.16 0.938 intMono L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 7.69e-01 0.0294 0.0998 0.939 ncMono L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 2.02e-02 -0.327 0.14 0.939 ncMono L2
ENSG00000139323 POC1B -468584 sc-eQTL 3.11e-01 -0.18 0.177 0.939 ncMono L2
ENSG00000198707 CEP290 915375 sc-eQTL 5.23e-01 -0.109 0.171 0.939 ncMono L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 2.87e-01 0.198 0.186 0.939 ncMono L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 4.56e-01 -0.11 0.147 0.939 ncMono L2
ENSG00000274021 AC024909.1 -293552 sc-eQTL 4.94e-01 0.11 0.161 0.939 ncMono L2
ENSG00000070961 ATP2B1 -651837 sc-eQTL 7.50e-02 0.259 0.145 0.932 pDC L2
ENSG00000139318 DUSP6 -295038 sc-eQTL 5.12e-01 0.0987 0.15 0.932 pDC L2
ENSG00000139323 POC1B -468584 sc-eQTL 2.64e-01 0.234 0.208 0.932 pDC L2
ENSG00000139324 TMTC3 915167 sc-eQTL 2.92e-01 -0.176 0.166 0.932 pDC L2
ENSG00000198707 CEP290 915375 sc-eQTL 1.79e-01 0.262 0.194 0.932 pDC L2
ENSG00000257594 GALNT4 -467333 sc-eQTL 7.34e-01 0.0637 0.187 0.932 pDC L2
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 9.11e-01 0.0189 0.168 0.932 pDC L2
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 7.38e-01 0.0405 0.121 0.932 pDC L2
ENSG00000274021 AC024909.1 -293552 sc-eQTL 5.88e-01 0.0808 0.149 0.932 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070961 ATP2B1 -651837 sc-eQTL 7.55e-01 -0.038 0.122 0.938 B_Memory LOneK1K
ENSG00000139318 DUSP6 -295038 sc-eQTL 1.25e-01 0.264 0.171 0.938 B_Memory LOneK1K
ENSG00000139323 POC1B -468584 sc-eQTL 1.92e-01 0.218 0.166 0.938 B_Memory LOneK1K
ENSG00000139324 TMTC3 915167 sc-eQTL 8.82e-01 -0.0276 0.186 0.938 B_Memory LOneK1K
ENSG00000198707 CEP290 915375 sc-eQTL 2.14e-01 -0.194 0.156 0.938 B_Memory LOneK1K
ENSG00000257594 GALNT4 -467333 sc-eQTL 9.35e-01 -0.0134 0.165 0.938 B_Memory LOneK1K
ENSG00000258216 AC009522.1 -654585 sc-eQTL 5.41e-01 -0.102 0.167 0.938 B_Memory LOneK1K
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 8.92e-01 0.0257 0.189 0.938 B_Memory LOneK1K
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 8.76e-01 -0.0204 0.13 0.938 B_Memory LOneK1K
ENSG00000070961 ATP2B1 -651837 sc-eQTL 5.11e-01 -0.0697 0.106 0.938 B_Naive LOneK1K
ENSG00000139318 DUSP6 -295038 sc-eQTL 7.28e-01 0.0461 0.132 0.938 B_Naive LOneK1K
ENSG00000139323 POC1B -468584 sc-eQTL 5.10e-01 -0.091 0.138 0.938 B_Naive LOneK1K
ENSG00000139324 TMTC3 915167 sc-eQTL 2.11e-02 -0.406 0.175 0.938 B_Naive LOneK1K
ENSG00000198707 CEP290 915375 sc-eQTL 2.05e-01 -0.19 0.149 0.938 B_Naive LOneK1K
ENSG00000257594 GALNT4 -467333 sc-eQTL 8.59e-01 -0.0261 0.147 0.938 B_Naive LOneK1K
ENSG00000258216 AC009522.1 -654585 sc-eQTL 9.58e-01 0.00847 0.159 0.938 B_Naive LOneK1K
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 7.80e-01 0.047 0.168 0.938 B_Naive LOneK1K
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 2.98e-01 0.133 0.127 0.938 B_Naive LOneK1K
ENSG00000070961 ATP2B1 -651837 sc-eQTL 2.06e-02 0.176 0.0756 0.938 CD14_Mono LOneK1K
ENSG00000139318 DUSP6 -295038 sc-eQTL 7.24e-01 0.044 0.125 0.938 CD14_Mono LOneK1K
ENSG00000139323 POC1B -468584 sc-eQTL 7.62e-01 0.0487 0.161 0.938 CD14_Mono LOneK1K
ENSG00000198707 CEP290 915375 sc-eQTL 5.13e-01 -0.104 0.159 0.938 CD14_Mono LOneK1K
ENSG00000257594 GALNT4 -467333 sc-eQTL 8.14e-01 0.0347 0.148 0.938 CD14_Mono LOneK1K
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 5.01e-01 -0.0804 0.119 0.938 CD14_Mono LOneK1K
ENSG00000274021 AC024909.1 -293552 sc-eQTL 8.93e-02 0.208 0.122 0.938 CD14_Mono LOneK1K
ENSG00000070961 ATP2B1 -651837 sc-eQTL 1.96e-01 -0.119 0.092 0.938 CD16_Mono LOneK1K
ENSG00000139318 DUSP6 -295038 sc-eQTL 4.21e-02 -0.237 0.116 0.938 CD16_Mono LOneK1K
ENSG00000139323 POC1B -468584 sc-eQTL 4.96e-01 -0.122 0.179 0.938 CD16_Mono LOneK1K
ENSG00000198707 CEP290 915375 sc-eQTL 9.18e-01 -0.0166 0.162 0.938 CD16_Mono LOneK1K
ENSG00000257594 GALNT4 -467333 sc-eQTL 8.61e-01 0.0305 0.174 0.938 CD16_Mono LOneK1K
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 5.73e-01 -0.0861 0.152 0.938 CD16_Mono LOneK1K
ENSG00000274021 AC024909.1 -293552 sc-eQTL 3.15e-01 0.149 0.148 0.938 CD16_Mono LOneK1K
ENSG00000070961 ATP2B1 -651837 sc-eQTL 3.65e-01 0.11 0.121 0.938 NK_CD56dim LOneK1K
ENSG00000139318 DUSP6 -295038 sc-eQTL 8.70e-01 0.0194 0.118 0.938 NK_CD56dim LOneK1K
ENSG00000139323 POC1B -468584 sc-eQTL 9.53e-01 0.00899 0.153 0.938 NK_CD56dim LOneK1K
ENSG00000139324 TMTC3 915167 sc-eQTL 7.37e-01 -0.057 0.17 0.938 NK_CD56dim LOneK1K
ENSG00000198707 CEP290 915375 sc-eQTL 7.68e-01 0.0431 0.146 0.938 NK_CD56dim LOneK1K
ENSG00000257594 GALNT4 -467333 sc-eQTL 1.60e-03 0.478 0.15 0.938 NK_CD56dim LOneK1K
ENSG00000270344 POC1B-AS1 -467131 sc-eQTL 3.83e-01 0.153 0.175 0.938 NK_CD56dim LOneK1K
ENSG00000271614 ATP2B1-AS1 -651496 sc-eQTL 4.79e-01 0.119 0.167 0.938 NK_CD56dim LOneK1K
ENSG00000274021 AC024909.1 -293552 sc-eQTL 3.80e-01 0.13 0.148 0.938 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139318 \N -295038 9.47e-07 5.74e-07 1.27e-07 4.04e-07 9.72e-08 1.74e-07 5.8e-07 1.59e-07 4.26e-07 2.43e-07 7.67e-07 3.73e-07 9.1e-07 1.49e-07 2.57e-07 2.36e-07 3.63e-07 4.11e-07 1.93e-07 1.69e-07 2.09e-07 3.92e-07 3.84e-07 2.27e-07 8.62e-07 2.55e-07 2.62e-07 2.7e-07 3.88e-07 6.81e-07 3.67e-07 6.31e-08 5.55e-08 1.52e-07 3.3e-07 1.83e-07 1.05e-07 9.58e-08 7.54e-08 5.77e-08 8.09e-08 5.96e-07 4.47e-08 1.53e-08 1.69e-07 1.59e-08 8.24e-08 1.77e-08 5.25e-08
ENSG00000274021 \N -293552 9.83e-07 6.09e-07 1.23e-07 4.08e-07 9.72e-08 1.74e-07 5.8e-07 1.62e-07 4.26e-07 2.43e-07 7.67e-07 3.84e-07 9.23e-07 1.49e-07 2.57e-07 2.36e-07 3.63e-07 4.11e-07 1.93e-07 1.71e-07 2.17e-07 3.95e-07 3.87e-07 2.29e-07 8.99e-07 2.55e-07 2.71e-07 2.71e-07 3.88e-07 6.81e-07 3.67e-07 6.31e-08 5.63e-08 1.54e-07 3.34e-07 1.83e-07 1.05e-07 9.58e-08 7.63e-08 5.25e-08 8.15e-08 6.11e-07 4.47e-08 1.54e-08 1.71e-07 1.61e-08 8.84e-08 1.79e-08 5.32e-08