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Genes within 1Mb (chr12:114244846:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089060 SLC8B1 885353 sc-eQTL 7.13e-01 0.0276 0.0748 0.609 B L1
ENSG00000122965 RBM19 278521 sc-eQTL 8.07e-01 -0.0152 0.0621 0.609 B L1
ENSG00000151176 PLBD2 886280 sc-eQTL 8.56e-01 -0.0127 0.0696 0.609 B L1
ENSG00000089060 SLC8B1 885353 sc-eQTL 7.21e-01 -0.0181 0.0507 0.609 CD4T L1
ENSG00000122965 RBM19 278521 sc-eQTL 1.55e-01 0.0724 0.0507 0.609 CD4T L1
ENSG00000151176 PLBD2 886280 sc-eQTL 9.72e-01 -0.00245 0.0692 0.609 CD4T L1
ENSG00000089060 SLC8B1 885353 sc-eQTL 5.43e-02 0.091 0.047 0.609 CD8T L1
ENSG00000122965 RBM19 278521 sc-eQTL 3.40e-01 0.055 0.0576 0.609 CD8T L1
ENSG00000151176 PLBD2 886280 sc-eQTL 6.40e-01 0.0336 0.0719 0.609 CD8T L1
ENSG00000089060 SLC8B1 885353 sc-eQTL 9.36e-01 -0.00671 0.0835 0.604 DC L1
ENSG00000122965 RBM19 278521 sc-eQTL 9.69e-01 -0.00335 0.0875 0.604 DC L1
ENSG00000135094 SDS 818545 sc-eQTL 8.70e-02 -0.131 0.0764 0.604 DC L1
ENSG00000139410 SDSL 822466 sc-eQTL 6.98e-01 0.0308 0.0793 0.604 DC L1
ENSG00000151176 PLBD2 886280 sc-eQTL 3.78e-01 0.0719 0.0814 0.604 DC L1
ENSG00000089060 SLC8B1 885353 sc-eQTL 9.11e-01 0.00854 0.0762 0.609 Mono L1
ENSG00000122965 RBM19 278521 sc-eQTL 5.30e-01 0.0411 0.0653 0.609 Mono L1
ENSG00000139410 SDSL 822466 sc-eQTL 6.06e-01 0.0381 0.0737 0.609 Mono L1
ENSG00000151176 PLBD2 886280 sc-eQTL 2.64e-01 0.0708 0.0632 0.609 Mono L1
ENSG00000089060 SLC8B1 885353 sc-eQTL 3.61e-01 0.0725 0.0792 0.609 NK L1
ENSG00000122965 RBM19 278521 sc-eQTL 6.10e-01 0.0323 0.0632 0.609 NK L1
ENSG00000151176 PLBD2 886280 sc-eQTL 1.55e-01 0.111 0.0777 0.609 NK L1
ENSG00000089060 SLC8B1 885353 sc-eQTL 4.33e-01 -0.0701 0.0893 0.609 Other_T L1
ENSG00000122965 RBM19 278521 sc-eQTL 7.31e-01 0.0274 0.0798 0.609 Other_T L1
ENSG00000151176 PLBD2 886280 sc-eQTL 9.24e-01 0.00868 0.0906 0.609 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089060 SLC8B1 885353 sc-eQTL 1.44e-01 -0.134 0.0913 0.592 B_Activated L2
ENSG00000122965 RBM19 278521 sc-eQTL 4.68e-01 -0.0755 0.104 0.592 B_Activated L2
ENSG00000151176 PLBD2 886280 sc-eQTL 2.09e-01 -0.124 0.0983 0.592 B_Activated L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 9.27e-01 -0.00847 0.0919 0.609 B_Intermediate L2
ENSG00000122965 RBM19 278521 sc-eQTL 9.71e-02 0.132 0.0792 0.609 B_Intermediate L2
ENSG00000151176 PLBD2 886280 sc-eQTL 5.36e-01 -0.0535 0.0864 0.609 B_Intermediate L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 3.82e-01 0.0764 0.0872 0.608 B_Memory L2
ENSG00000122965 RBM19 278521 sc-eQTL 6.70e-01 0.0344 0.0805 0.608 B_Memory L2
ENSG00000151176 PLBD2 886280 sc-eQTL 1.29e-01 0.134 0.0881 0.608 B_Memory L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 8.94e-01 0.0108 0.0813 0.609 B_Naive1 L2
ENSG00000122965 RBM19 278521 sc-eQTL 5.59e-01 -0.0418 0.0714 0.609 B_Naive1 L2
ENSG00000151176 PLBD2 886280 sc-eQTL 7.56e-01 0.0277 0.0891 0.609 B_Naive1 L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 4.71e-01 0.0604 0.0838 0.607 B_Naive2 L2
ENSG00000122965 RBM19 278521 sc-eQTL 9.86e-01 0.00136 0.0786 0.607 B_Naive2 L2
ENSG00000151176 PLBD2 886280 sc-eQTL 5.39e-01 0.0516 0.0838 0.607 B_Naive2 L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 1.92e-01 0.117 0.0892 0.602 CD4_CTL L2
ENSG00000122965 RBM19 278521 sc-eQTL 3.87e-01 0.0799 0.0921 0.602 CD4_CTL L2
ENSG00000151176 PLBD2 886280 sc-eQTL 1.56e-01 0.131 0.0921 0.602 CD4_CTL L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 9.64e-01 0.00272 0.0607 0.609 CD4_Naive L2
ENSG00000122965 RBM19 278521 sc-eQTL 2.15e-01 0.0694 0.0558 0.609 CD4_Naive L2
ENSG00000151176 PLBD2 886280 sc-eQTL 9.98e-01 -0.000204 0.072 0.609 CD4_Naive L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 1.85e-01 -0.0898 0.0675 0.609 CD4_TCM L2
ENSG00000122965 RBM19 278521 sc-eQTL 1.96e-01 0.092 0.071 0.609 CD4_TCM L2
ENSG00000151176 PLBD2 886280 sc-eQTL 8.52e-01 0.016 0.086 0.609 CD4_TCM L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 5.13e-01 -0.0543 0.0829 0.609 CD4_TEM L2
ENSG00000122965 RBM19 278521 sc-eQTL 4.00e-01 -0.067 0.0795 0.609 CD4_TEM L2
ENSG00000151176 PLBD2 886280 sc-eQTL 3.66e-01 -0.0831 0.0916 0.609 CD4_TEM L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 9.96e-01 0.000377 0.0851 0.609 CD8_CTL L2
ENSG00000122965 RBM19 278521 sc-eQTL 5.23e-01 0.0473 0.074 0.609 CD8_CTL L2
ENSG00000151176 PLBD2 886280 sc-eQTL 7.94e-01 0.0218 0.0835 0.609 CD8_CTL L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 6.38e-01 0.0334 0.0709 0.609 CD8_Naive L2
ENSG00000122965 RBM19 278521 sc-eQTL 7.83e-01 0.0176 0.0638 0.609 CD8_Naive L2
ENSG00000151176 PLBD2 886280 sc-eQTL 6.73e-01 0.0317 0.0749 0.609 CD8_Naive L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 3.76e-01 -0.0802 0.0903 0.604 CD8_TCM L2
ENSG00000122965 RBM19 278521 sc-eQTL 3.40e-01 0.0845 0.0883 0.604 CD8_TCM L2
ENSG00000151176 PLBD2 886280 sc-eQTL 3.83e-01 0.0837 0.0957 0.604 CD8_TCM L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 2.65e-02 0.202 0.0903 0.61 CD8_TEM L2
ENSG00000122965 RBM19 278521 sc-eQTL 2.27e-01 0.116 0.096 0.61 CD8_TEM L2
ENSG00000151176 PLBD2 886280 sc-eQTL 6.21e-01 0.0467 0.0943 0.61 CD8_TEM L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 2.20e-01 -0.106 0.0862 0.61 MAIT L2
ENSG00000122965 RBM19 278521 sc-eQTL 4.20e-01 -0.0682 0.0845 0.61 MAIT L2
ENSG00000151176 PLBD2 886280 sc-eQTL 2.94e-01 -0.0948 0.09 0.61 MAIT L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 3.33e-01 0.0864 0.089 0.604 NK_CD56bright L2
ENSG00000122965 RBM19 278521 sc-eQTL 7.08e-01 0.0337 0.0898 0.604 NK_CD56bright L2
ENSG00000151176 PLBD2 886280 sc-eQTL 2.46e-01 0.106 0.091 0.604 NK_CD56bright L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 1.81e-01 0.117 0.0871 0.608 NK_CD56dim L2
ENSG00000122965 RBM19 278521 sc-eQTL 2.79e-01 0.0779 0.0719 0.608 NK_CD56dim L2
ENSG00000151176 PLBD2 886280 sc-eQTL 1.59e-01 0.119 0.0839 0.608 NK_CD56dim L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 7.50e-01 -0.0274 0.0858 0.605 NK_HLA L2
ENSG00000122965 RBM19 278521 sc-eQTL 9.59e-01 0.00451 0.088 0.605 NK_HLA L2
ENSG00000151176 PLBD2 886280 sc-eQTL 1.11e-01 0.142 0.0887 0.605 NK_HLA L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 3.51e-01 -0.0743 0.0795 0.608 NK_cytokine L2
ENSG00000122965 RBM19 278521 sc-eQTL 7.18e-01 0.0271 0.0749 0.608 NK_cytokine L2
ENSG00000151176 PLBD2 886280 sc-eQTL 7.33e-01 0.028 0.082 0.608 NK_cytokine L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 5.94e-01 -0.0623 0.116 0.615 PB L2
ENSG00000122965 RBM19 278521 sc-eQTL 5.15e-01 -0.0772 0.118 0.615 PB L2
ENSG00000151176 PLBD2 886280 sc-eQTL 7.02e-01 0.0427 0.111 0.615 PB L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 1.69e-01 -0.121 0.0881 0.604 Pro_T L2
ENSG00000122965 RBM19 278521 sc-eQTL 9.45e-01 0.00581 0.0847 0.604 Pro_T L2
ENSG00000151176 PLBD2 886280 sc-eQTL 9.87e-01 -0.00141 0.0872 0.604 Pro_T L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 8.65e-01 -0.0137 0.0803 0.609 Treg L2
ENSG00000122965 RBM19 278521 sc-eQTL 9.35e-01 -0.00612 0.0746 0.609 Treg L2
ENSG00000151176 PLBD2 886280 sc-eQTL 8.11e-01 -0.0208 0.0867 0.609 Treg L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 4.05e-01 0.0785 0.094 0.598 cDC L2
ENSG00000122965 RBM19 278521 sc-eQTL 2.53e-01 0.107 0.0938 0.598 cDC L2
ENSG00000135094 SDS 818545 sc-eQTL 4.04e-02 -0.161 0.078 0.598 cDC L2
ENSG00000139410 SDSL 822466 sc-eQTL 1.45e-01 0.122 0.0834 0.598 cDC L2
ENSG00000151176 PLBD2 886280 sc-eQTL 2.91e-01 0.0971 0.0916 0.598 cDC L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 9.54e-01 0.00477 0.0825 0.609 cMono_IL1B L2
ENSG00000122965 RBM19 278521 sc-eQTL 2.23e-01 0.0887 0.0726 0.609 cMono_IL1B L2
ENSG00000139410 SDSL 822466 sc-eQTL 4.93e-01 0.0516 0.0752 0.609 cMono_IL1B L2
ENSG00000151176 PLBD2 886280 sc-eQTL 3.20e-01 0.0701 0.0704 0.609 cMono_IL1B L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 3.67e-01 -0.0805 0.0889 0.609 cMono_S100A L2
ENSG00000122965 RBM19 278521 sc-eQTL 2.01e-01 -0.107 0.0833 0.609 cMono_S100A L2
ENSG00000139410 SDSL 822466 sc-eQTL 7.40e-01 0.0263 0.0792 0.609 cMono_S100A L2
ENSG00000151176 PLBD2 886280 sc-eQTL 3.99e-01 -0.0651 0.0771 0.609 cMono_S100A L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 9.66e-01 -0.00405 0.0937 0.591 gdT L2
ENSG00000122965 RBM19 278521 sc-eQTL 2.37e-01 0.118 0.0997 0.591 gdT L2
ENSG00000151176 PLBD2 886280 sc-eQTL 3.49e-01 0.0885 0.0942 0.591 gdT L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 2.23e-01 0.111 0.0911 0.607 intMono L2
ENSG00000122965 RBM19 278521 sc-eQTL 1.95e-01 -0.109 0.0838 0.607 intMono L2
ENSG00000139410 SDSL 822466 sc-eQTL 7.70e-01 0.0257 0.088 0.607 intMono L2
ENSG00000151176 PLBD2 886280 sc-eQTL 8.81e-01 -0.0121 0.0811 0.607 intMono L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 2.46e-01 0.0887 0.0762 0.604 ncMono L2
ENSG00000122965 RBM19 278521 sc-eQTL 6.07e-01 0.045 0.0873 0.604 ncMono L2
ENSG00000139410 SDSL 822466 sc-eQTL 1.84e-01 -0.1 0.0751 0.604 ncMono L2
ENSG00000151176 PLBD2 886280 sc-eQTL 3.01e-02 0.171 0.0781 0.604 ncMono L2
ENSG00000089060 SLC8B1 885353 sc-eQTL 2.89e-01 -0.104 0.098 0.613 pDC L2
ENSG00000122965 RBM19 278521 sc-eQTL 7.94e-01 -0.0245 0.0939 0.613 pDC L2
ENSG00000135094 SDS 818545 sc-eQTL 6.82e-01 0.0284 0.0692 0.613 pDC L2
ENSG00000139410 SDSL 822466 sc-eQTL 4.50e-01 -0.0716 0.0944 0.613 pDC L2
ENSG00000151176 PLBD2 886280 sc-eQTL 5.06e-01 -0.0659 0.0988 0.613 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089060 SLC8B1 885353 sc-eQTL 6.95e-01 0.0359 0.0917 0.609 B_Memory LOneK1K
ENSG00000122965 RBM19 278521 sc-eQTL 1.37e-01 0.107 0.072 0.609 B_Memory LOneK1K
ENSG00000151176 PLBD2 886280 sc-eQTL 4.85e-01 0.0578 0.0825 0.609 B_Memory LOneK1K
ENSG00000089060 SLC8B1 885353 sc-eQTL 4.00e-01 0.0643 0.0762 0.609 B_Naive LOneK1K
ENSG00000122965 RBM19 278521 sc-eQTL 5.78e-01 -0.0377 0.0678 0.609 B_Naive LOneK1K
ENSG00000151176 PLBD2 886280 sc-eQTL 8.79e-01 0.0126 0.0828 0.609 B_Naive LOneK1K
ENSG00000089060 SLC8B1 885353 sc-eQTL 5.93e-01 -0.0431 0.0806 0.609 CD14_Mono LOneK1K
ENSG00000122965 RBM19 278521 sc-eQTL 6.20e-01 0.0349 0.0704 0.609 CD14_Mono LOneK1K
ENSG00000139410 SDSL 822466 sc-eQTL 4.67e-01 0.0528 0.0725 0.609 CD14_Mono LOneK1K
ENSG00000151176 PLBD2 886280 sc-eQTL 5.23e-01 0.0421 0.0658 0.609 CD14_Mono LOneK1K
ENSG00000089060 SLC8B1 885353 sc-eQTL 3.10e-01 0.0764 0.0751 0.608 CD16_Mono LOneK1K
ENSG00000122965 RBM19 278521 sc-eQTL 9.51e-01 -0.0047 0.0767 0.608 CD16_Mono LOneK1K
ENSG00000139410 SDSL 822466 sc-eQTL 5.20e-01 -0.0491 0.0761 0.608 CD16_Mono LOneK1K
ENSG00000151176 PLBD2 886280 sc-eQTL 2.78e-01 0.0711 0.0654 0.608 CD16_Mono LOneK1K
ENSG00000089060 SLC8B1 885353 sc-eQTL 8.10e-01 0.0197 0.0815 0.608 NK_CD56dim LOneK1K
ENSG00000122965 RBM19 278521 sc-eQTL 4.80e-01 0.0472 0.0667 0.608 NK_CD56dim LOneK1K
ENSG00000151176 PLBD2 886280 sc-eQTL 2.05e-01 0.0999 0.0786 0.608 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089060 SLC8B1 885353 eQTL 0.0363 0.0495 0.0236 0.0 0.0 0.354
ENSG00000122965 RBM19 278521 eQTL 0.0467 0.023 0.0116 0.0 0.0 0.354

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina