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Genes within 1Mb (chr12:114117905:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089060 SLC8B1 758412 sc-eQTL 1.76e-01 -0.269 0.198 0.052 DC L1
ENSG00000122965 RBM19 151580 sc-eQTL 3.49e-01 0.195 0.208 0.052 DC L1
ENSG00000123064 DDX54 932426 sc-eQTL 4.13e-01 0.153 0.186 0.052 DC L1
ENSG00000135094 SDS 691604 sc-eQTL 1.73e-02 0.434 0.181 0.052 DC L1
ENSG00000139405 RITA1 932379 sc-eQTL 3.18e-01 0.204 0.204 0.052 DC L1
ENSG00000139410 SDSL 695525 sc-eQTL 5.78e-01 -0.105 0.189 0.052 DC L1
ENSG00000151176 PLBD2 759339 sc-eQTL 4.35e-01 0.152 0.194 0.052 DC L1
ENSG00000166578 IQCD 896811 sc-eQTL 5.28e-01 0.111 0.175 0.052 DC L1
ENSG00000186815 TPCN1 896855 sc-eQTL 9.30e-01 0.0138 0.158 0.052 DC L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089060 SLC8B1 758412 sc-eQTL 3.36e-01 0.203 0.21 0.05 CD4_CTL L2
ENSG00000122965 RBM19 151580 sc-eQTL 8.96e-01 -0.0285 0.217 0.05 CD4_CTL L2
ENSG00000123064 DDX54 932426 sc-eQTL 2.87e-01 -0.227 0.212 0.05 CD4_CTL L2
ENSG00000139405 RITA1 932379 sc-eQTL 2.97e-01 -0.221 0.211 0.05 CD4_CTL L2
ENSG00000151176 PLBD2 759339 sc-eQTL 5.23e-02 -0.421 0.216 0.05 CD4_CTL L2
ENSG00000186815 TPCN1 896855 sc-eQTL 9.99e-01 0.000328 0.199 0.05 CD4_CTL L2
ENSG00000089060 SLC8B1 758412 sc-eQTL 5.70e-01 0.119 0.209 0.051 CD8_TCM L2
ENSG00000122965 RBM19 151580 sc-eQTL 1.89e-01 0.268 0.203 0.051 CD8_TCM L2
ENSG00000123064 DDX54 932426 sc-eQTL 3.56e-01 0.212 0.229 0.051 CD8_TCM L2
ENSG00000139405 RITA1 932379 sc-eQTL 2.17e-01 0.268 0.216 0.051 CD8_TCM L2
ENSG00000151176 PLBD2 759339 sc-eQTL 5.31e-01 0.139 0.221 0.051 CD8_TCM L2
ENSG00000186815 TPCN1 896855 sc-eQTL 5.56e-01 0.128 0.217 0.051 CD8_TCM L2
ENSG00000089060 SLC8B1 758412 sc-eQTL 2.14e-01 0.272 0.218 0.053 CD8_TEM L2
ENSG00000122965 RBM19 151580 sc-eQTL 5.61e-01 0.134 0.231 0.053 CD8_TEM L2
ENSG00000123064 DDX54 932426 sc-eQTL 5.57e-01 0.133 0.227 0.053 CD8_TEM L2
ENSG00000139405 RITA1 932379 sc-eQTL 7.31e-01 0.0711 0.207 0.053 CD8_TEM L2
ENSG00000151176 PLBD2 759339 sc-eQTL 7.91e-01 0.06 0.226 0.053 CD8_TEM L2
ENSG00000186815 TPCN1 896855 sc-eQTL 4.41e-01 -0.167 0.216 0.053 CD8_TEM L2
ENSG00000089060 SLC8B1 758412 sc-eQTL 1.11e-01 -0.352 0.22 0.05 Pro_T L2
ENSG00000122965 RBM19 151580 sc-eQTL 1.44e-01 0.309 0.211 0.05 Pro_T L2
ENSG00000123064 DDX54 932426 sc-eQTL 4.48e-01 0.145 0.19 0.05 Pro_T L2
ENSG00000139405 RITA1 932379 sc-eQTL 5.12e-01 0.131 0.2 0.05 Pro_T L2
ENSG00000151176 PLBD2 759339 sc-eQTL 6.06e-01 0.113 0.218 0.05 Pro_T L2
ENSG00000186815 TPCN1 896855 sc-eQTL 3.88e-02 0.408 0.196 0.05 Pro_T L2
ENSG00000089060 SLC8B1 758412 sc-eQTL 7.62e-01 -0.0676 0.223 0.054 cDC L2
ENSG00000122965 RBM19 151580 sc-eQTL 8.93e-01 0.0299 0.223 0.054 cDC L2
ENSG00000123064 DDX54 932426 sc-eQTL 7.47e-01 0.0691 0.213 0.054 cDC L2
ENSG00000135094 SDS 691604 sc-eQTL 1.75e-02 0.44 0.184 0.054 cDC L2
ENSG00000139405 RITA1 932379 sc-eQTL 5.92e-02 0.395 0.208 0.054 cDC L2
ENSG00000139410 SDSL 695525 sc-eQTL 9.98e-01 0.00051 0.198 0.054 cDC L2
ENSG00000151176 PLBD2 759339 sc-eQTL 4.18e-01 0.176 0.217 0.054 cDC L2
ENSG00000166578 IQCD 896811 sc-eQTL 6.09e-01 -0.0947 0.185 0.054 cDC L2
ENSG00000186815 TPCN1 896855 sc-eQTL 7.33e-01 0.0553 0.161 0.054 cDC L2
ENSG00000089060 SLC8B1 758412 sc-eQTL 3.08e-01 0.235 0.23 0.055 gdT L2
ENSG00000122965 RBM19 151580 sc-eQTL 7.54e-01 0.0774 0.247 0.055 gdT L2
ENSG00000123064 DDX54 932426 sc-eQTL 7.84e-01 -0.0709 0.258 0.055 gdT L2
ENSG00000139405 RITA1 932379 sc-eQTL 8.81e-01 -0.0394 0.262 0.055 gdT L2
ENSG00000151176 PLBD2 759339 sc-eQTL 9.04e-01 0.028 0.233 0.055 gdT L2
ENSG00000186815 TPCN1 896855 sc-eQTL 7.51e-01 0.0754 0.237 0.055 gdT L2
ENSG00000089060 SLC8B1 758412 sc-eQTL 1.07e-01 0.352 0.217 0.051 intMono L2
ENSG00000122965 RBM19 151580 sc-eQTL 6.56e-01 0.0897 0.201 0.051 intMono L2
ENSG00000123064 DDX54 932426 sc-eQTL 3.30e-01 0.188 0.193 0.051 intMono L2
ENSG00000139405 RITA1 932379 sc-eQTL 8.23e-01 0.048 0.215 0.051 intMono L2
ENSG00000139410 SDSL 695525 sc-eQTL 4.51e-01 -0.159 0.21 0.051 intMono L2
ENSG00000151176 PLBD2 759339 sc-eQTL 2.23e-01 0.236 0.193 0.051 intMono L2
ENSG00000186815 TPCN1 896855 sc-eQTL 5.81e-01 0.0945 0.171 0.051 intMono L2
ENSG00000089060 SLC8B1 758412 sc-eQTL 1.49e-02 -0.572 0.232 0.054 pDC L2
ENSG00000122965 RBM19 151580 sc-eQTL 6.84e-02 0.411 0.224 0.054 pDC L2
ENSG00000123064 DDX54 932426 sc-eQTL 5.13e-01 0.151 0.23 0.054 pDC L2
ENSG00000135094 SDS 691604 sc-eQTL 4.03e-01 0.14 0.166 0.054 pDC L2
ENSG00000139405 RITA1 932379 sc-eQTL 6.49e-01 0.106 0.232 0.054 pDC L2
ENSG00000139410 SDSL 695525 sc-eQTL 4.81e-01 -0.161 0.227 0.054 pDC L2
ENSG00000151176 PLBD2 759339 sc-eQTL 6.37e-01 0.112 0.238 0.054 pDC L2
ENSG00000166578 IQCD 896811 sc-eQTL 1.69e-01 0.251 0.181 0.054 pDC L2
ENSG00000186815 TPCN1 896855 sc-eQTL 5.14e-01 -0.141 0.216 0.054 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000122965 RBM19 151580 eQTL 0.00382 0.0725 0.025 0.0 0.0 0.0584

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000135094 \N 691604 3.14e-07 1.51e-07 6.26e-08 2.22e-07 1.05e-07 8.63e-08 2.1e-07 6.12e-08 1.71e-07 9.72e-08 1.69e-07 1.31e-07 2.38e-07 8.07e-08 5.36e-08 9.01e-08 4.35e-08 1.8e-07 7.09e-08 5.87e-08 1.18e-07 1.56e-07 1.58e-07 3.51e-08 2.09e-07 1.31e-07 1.2e-07 1.12e-07 1.31e-07 1.29e-07 1.26e-07 4.61e-08 3.29e-08 9.08e-08 3.36e-08 3.05e-08 4.41e-08 8.57e-08 6.28e-08 4.08e-08 5.54e-08 1.55e-07 5.27e-08 1.19e-08 3.07e-08 8.31e-09 8.46e-08 1.98e-09 4.85e-08