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Genes within 1Mb (chr12:114113516:G:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089060 SLC8B1 754023 sc-eQTL 1.76e-01 -0.269 0.198 0.052 DC L1
ENSG00000122965 RBM19 147191 sc-eQTL 3.49e-01 0.195 0.208 0.052 DC L1
ENSG00000123064 DDX54 928037 sc-eQTL 4.13e-01 0.153 0.186 0.052 DC L1
ENSG00000135094 SDS 687215 sc-eQTL 1.73e-02 0.434 0.181 0.052 DC L1
ENSG00000139405 RITA1 927990 sc-eQTL 3.18e-01 0.204 0.204 0.052 DC L1
ENSG00000139410 SDSL 691136 sc-eQTL 5.78e-01 -0.105 0.189 0.052 DC L1
ENSG00000151176 PLBD2 754950 sc-eQTL 4.35e-01 0.152 0.194 0.052 DC L1
ENSG00000166578 IQCD 892422 sc-eQTL 5.28e-01 0.111 0.175 0.052 DC L1
ENSG00000186815 TPCN1 892466 sc-eQTL 9.30e-01 0.0138 0.158 0.052 DC L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089060 SLC8B1 754023 sc-eQTL 3.36e-01 0.203 0.21 0.05 CD4_CTL L2
ENSG00000122965 RBM19 147191 sc-eQTL 8.96e-01 -0.0285 0.217 0.05 CD4_CTL L2
ENSG00000123064 DDX54 928037 sc-eQTL 2.87e-01 -0.227 0.212 0.05 CD4_CTL L2
ENSG00000139405 RITA1 927990 sc-eQTL 2.97e-01 -0.221 0.211 0.05 CD4_CTL L2
ENSG00000151176 PLBD2 754950 sc-eQTL 5.23e-02 -0.421 0.216 0.05 CD4_CTL L2
ENSG00000186815 TPCN1 892466 sc-eQTL 9.99e-01 0.000328 0.199 0.05 CD4_CTL L2
ENSG00000089060 SLC8B1 754023 sc-eQTL 5.70e-01 0.119 0.209 0.051 CD8_TCM L2
ENSG00000122965 RBM19 147191 sc-eQTL 1.89e-01 0.268 0.203 0.051 CD8_TCM L2
ENSG00000123064 DDX54 928037 sc-eQTL 3.56e-01 0.212 0.229 0.051 CD8_TCM L2
ENSG00000139405 RITA1 927990 sc-eQTL 2.17e-01 0.268 0.216 0.051 CD8_TCM L2
ENSG00000151176 PLBD2 754950 sc-eQTL 5.31e-01 0.139 0.221 0.051 CD8_TCM L2
ENSG00000186815 TPCN1 892466 sc-eQTL 5.56e-01 0.128 0.217 0.051 CD8_TCM L2
ENSG00000089060 SLC8B1 754023 sc-eQTL 2.14e-01 0.272 0.218 0.053 CD8_TEM L2
ENSG00000122965 RBM19 147191 sc-eQTL 5.61e-01 0.134 0.231 0.053 CD8_TEM L2
ENSG00000123064 DDX54 928037 sc-eQTL 5.57e-01 0.133 0.227 0.053 CD8_TEM L2
ENSG00000139405 RITA1 927990 sc-eQTL 7.31e-01 0.0711 0.207 0.053 CD8_TEM L2
ENSG00000151176 PLBD2 754950 sc-eQTL 7.91e-01 0.06 0.226 0.053 CD8_TEM L2
ENSG00000186815 TPCN1 892466 sc-eQTL 4.41e-01 -0.167 0.216 0.053 CD8_TEM L2
ENSG00000089060 SLC8B1 754023 sc-eQTL 1.11e-01 -0.352 0.22 0.05 Pro_T L2
ENSG00000122965 RBM19 147191 sc-eQTL 1.44e-01 0.309 0.211 0.05 Pro_T L2
ENSG00000123064 DDX54 928037 sc-eQTL 4.48e-01 0.145 0.19 0.05 Pro_T L2
ENSG00000139405 RITA1 927990 sc-eQTL 5.12e-01 0.131 0.2 0.05 Pro_T L2
ENSG00000151176 PLBD2 754950 sc-eQTL 6.06e-01 0.113 0.218 0.05 Pro_T L2
ENSG00000186815 TPCN1 892466 sc-eQTL 3.88e-02 0.408 0.196 0.05 Pro_T L2
ENSG00000089060 SLC8B1 754023 sc-eQTL 7.62e-01 -0.0676 0.223 0.054 cDC L2
ENSG00000122965 RBM19 147191 sc-eQTL 8.93e-01 0.0299 0.223 0.054 cDC L2
ENSG00000123064 DDX54 928037 sc-eQTL 7.47e-01 0.0691 0.213 0.054 cDC L2
ENSG00000135094 SDS 687215 sc-eQTL 1.75e-02 0.44 0.184 0.054 cDC L2
ENSG00000139405 RITA1 927990 sc-eQTL 5.92e-02 0.395 0.208 0.054 cDC L2
ENSG00000139410 SDSL 691136 sc-eQTL 9.98e-01 0.00051 0.198 0.054 cDC L2
ENSG00000151176 PLBD2 754950 sc-eQTL 4.18e-01 0.176 0.217 0.054 cDC L2
ENSG00000166578 IQCD 892422 sc-eQTL 6.09e-01 -0.0947 0.185 0.054 cDC L2
ENSG00000186815 TPCN1 892466 sc-eQTL 7.33e-01 0.0553 0.161 0.054 cDC L2
ENSG00000089060 SLC8B1 754023 sc-eQTL 3.08e-01 0.235 0.23 0.055 gdT L2
ENSG00000122965 RBM19 147191 sc-eQTL 7.54e-01 0.0774 0.247 0.055 gdT L2
ENSG00000123064 DDX54 928037 sc-eQTL 7.84e-01 -0.0709 0.258 0.055 gdT L2
ENSG00000139405 RITA1 927990 sc-eQTL 8.81e-01 -0.0394 0.262 0.055 gdT L2
ENSG00000151176 PLBD2 754950 sc-eQTL 9.04e-01 0.028 0.233 0.055 gdT L2
ENSG00000186815 TPCN1 892466 sc-eQTL 7.51e-01 0.0754 0.237 0.055 gdT L2
ENSG00000089060 SLC8B1 754023 sc-eQTL 1.07e-01 0.352 0.217 0.051 intMono L2
ENSG00000122965 RBM19 147191 sc-eQTL 6.56e-01 0.0897 0.201 0.051 intMono L2
ENSG00000123064 DDX54 928037 sc-eQTL 3.30e-01 0.188 0.193 0.051 intMono L2
ENSG00000139405 RITA1 927990 sc-eQTL 8.23e-01 0.048 0.215 0.051 intMono L2
ENSG00000139410 SDSL 691136 sc-eQTL 4.51e-01 -0.159 0.21 0.051 intMono L2
ENSG00000151176 PLBD2 754950 sc-eQTL 2.23e-01 0.236 0.193 0.051 intMono L2
ENSG00000186815 TPCN1 892466 sc-eQTL 5.81e-01 0.0945 0.171 0.051 intMono L2
ENSG00000089060 SLC8B1 754023 sc-eQTL 1.49e-02 -0.572 0.232 0.054 pDC L2
ENSG00000122965 RBM19 147191 sc-eQTL 6.84e-02 0.411 0.224 0.054 pDC L2
ENSG00000123064 DDX54 928037 sc-eQTL 5.13e-01 0.151 0.23 0.054 pDC L2
ENSG00000135094 SDS 687215 sc-eQTL 4.03e-01 0.14 0.166 0.054 pDC L2
ENSG00000139405 RITA1 927990 sc-eQTL 6.49e-01 0.106 0.232 0.054 pDC L2
ENSG00000139410 SDSL 691136 sc-eQTL 4.81e-01 -0.161 0.227 0.054 pDC L2
ENSG00000151176 PLBD2 754950 sc-eQTL 6.37e-01 0.112 0.238 0.054 pDC L2
ENSG00000166578 IQCD 892422 sc-eQTL 1.69e-01 0.251 0.181 0.054 pDC L2
ENSG00000186815 TPCN1 892466 sc-eQTL 5.14e-01 -0.141 0.216 0.054 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000122965 RBM19 147191 eQTL 0.00383 0.0724 0.025 0.0 0.0 0.0584

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000135094 \N 687215 3.14e-07 1.53e-07 6.45e-08 2.15e-07 1.05e-07 8.89e-08 2.16e-07 5.84e-08 1.85e-07 1.03e-07 1.69e-07 1.37e-07 2.24e-07 8.07e-08 5.62e-08 9.6e-08 5.27e-08 1.91e-07 7.36e-08 5.75e-08 1.24e-07 1.7e-07 1.68e-07 3.68e-08 2.09e-07 1.56e-07 1.29e-07 1.12e-07 1.37e-07 1.24e-07 1.14e-07 4.47e-08 3.65e-08 9.52e-08 4.04e-08 3.18e-08 3.91e-08 7.51e-08 6.62e-08 5.35e-08 6.14e-08 1.59e-07 3.4e-08 7.66e-09 3.36e-08 8.31e-09 7.12e-08 2.13e-09 4.67e-08