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Genes within 1Mb (chr12:114060365:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089060 SLC8B1 700872 sc-eQTL 5.91e-01 0.108 0.2 0.051 B_Activated L2
ENSG00000122965 RBM19 94040 sc-eQTL 4.51e-01 -0.171 0.226 0.051 B_Activated L2
ENSG00000123064 DDX54 874886 sc-eQTL 5.16e-01 -0.155 0.238 0.051 B_Activated L2
ENSG00000139405 RITA1 874839 sc-eQTL 3.65e-01 0.189 0.209 0.051 B_Activated L2
ENSG00000151176 PLBD2 701799 sc-eQTL 6.56e-01 -0.0959 0.215 0.051 B_Activated L2
ENSG00000186815 TPCN1 839315 sc-eQTL 1.60e-01 0.298 0.211 0.051 B_Activated L2
ENSG00000089060 SLC8B1 700872 sc-eQTL 2.81e-01 0.216 0.2 0.05 CD4_CTL L2
ENSG00000122965 RBM19 94040 sc-eQTL 4.85e-02 0.405 0.204 0.05 CD4_CTL L2
ENSG00000123064 DDX54 874886 sc-eQTL 1.95e-01 -0.262 0.202 0.05 CD4_CTL L2
ENSG00000139405 RITA1 874839 sc-eQTL 7.11e-02 0.362 0.2 0.05 CD4_CTL L2
ENSG00000151176 PLBD2 701799 sc-eQTL 8.55e-01 0.0379 0.207 0.05 CD4_CTL L2
ENSG00000186815 TPCN1 839315 sc-eQTL 9.59e-01 0.0097 0.189 0.05 CD4_CTL L2
ENSG00000089060 SLC8B1 700872 sc-eQTL 5.18e-01 -0.138 0.213 0.05 CD8_TEM L2
ENSG00000122965 RBM19 94040 sc-eQTL 3.34e-02 0.476 0.222 0.05 CD8_TEM L2
ENSG00000123064 DDX54 874886 sc-eQTL 9.69e-01 0.00872 0.221 0.05 CD8_TEM L2
ENSG00000139405 RITA1 874839 sc-eQTL 9.86e-01 -0.00362 0.202 0.05 CD8_TEM L2
ENSG00000151176 PLBD2 701799 sc-eQTL 1.77e-01 0.297 0.219 0.05 CD8_TEM L2
ENSG00000186815 TPCN1 839315 sc-eQTL 8.17e-01 0.0488 0.211 0.05 CD8_TEM L2
ENSG00000089060 SLC8B1 700872 sc-eQTL 1.07e-01 0.338 0.209 0.051 NK_CD56bright L2
ENSG00000122965 RBM19 94040 sc-eQTL 3.84e-02 -0.436 0.209 0.051 NK_CD56bright L2
ENSG00000123064 DDX54 874886 sc-eQTL 3.72e-01 0.191 0.214 0.051 NK_CD56bright L2
ENSG00000139405 RITA1 874839 sc-eQTL 2.15e-01 0.267 0.215 0.051 NK_CD56bright L2
ENSG00000151176 PLBD2 701799 sc-eQTL 1.29e-01 -0.326 0.214 0.051 NK_CD56bright L2
ENSG00000089060 SLC8B1 700872 sc-eQTL 5.86e-01 -0.106 0.195 0.053 NK_HLA L2
ENSG00000122965 RBM19 94040 sc-eQTL 8.20e-01 0.0456 0.2 0.053 NK_HLA L2
ENSG00000123064 DDX54 874886 sc-eQTL 9.24e-01 0.0204 0.213 0.053 NK_HLA L2
ENSG00000139405 RITA1 874839 sc-eQTL 7.33e-01 0.0701 0.205 0.053 NK_HLA L2
ENSG00000151176 PLBD2 701799 sc-eQTL 7.26e-01 -0.0712 0.203 0.053 NK_HLA L2
ENSG00000089060 SLC8B1 700872 sc-eQTL 1.46e-01 0.309 0.212 0.05 Pro_T L2
ENSG00000122965 RBM19 94040 sc-eQTL 7.52e-01 0.0643 0.203 0.05 Pro_T L2
ENSG00000123064 DDX54 874886 sc-eQTL 2.23e-02 -0.416 0.18 0.05 Pro_T L2
ENSG00000139405 RITA1 874839 sc-eQTL 5.23e-01 -0.123 0.192 0.05 Pro_T L2
ENSG00000151176 PLBD2 701799 sc-eQTL 8.30e-01 0.045 0.21 0.05 Pro_T L2
ENSG00000186815 TPCN1 839315 sc-eQTL 3.31e-01 0.185 0.19 0.05 Pro_T L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000122965 RBM19 94040 eQTL 0.0213 0.0675 0.0293 0.0 0.0 0.0397
ENSG00000139405 RITA1 874839 eQTL 0.0395 0.101 0.0489 0.0 0.0 0.0397

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina