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Genes within 1Mb (chr12:113829450:G:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089060 SLC8B1 469957 sc-eQTL 4.69e-01 0.137 0.189 0.052 DC L1
ENSG00000089127 OAS1 922667 sc-eQTL 7.69e-01 0.0384 0.13 0.052 DC L1
ENSG00000111331 OAS3 891006 sc-eQTL 3.68e-02 0.315 0.15 0.052 DC L1
ENSG00000111335 OAS2 851055 sc-eQTL 3.74e-01 0.136 0.152 0.052 DC L1
ENSG00000122965 RBM19 -136875 sc-eQTL 9.20e-01 -0.0199 0.199 0.052 DC L1
ENSG00000123064 DDX54 643971 sc-eQTL 5.71e-01 0.101 0.178 0.052 DC L1
ENSG00000135094 SDS 403149 sc-eQTL 4.98e-02 0.342 0.173 0.052 DC L1
ENSG00000139405 RITA1 643924 sc-eQTL 7.91e-01 0.0518 0.195 0.052 DC L1
ENSG00000139410 SDSL 407070 sc-eQTL 1.26e-01 0.276 0.179 0.052 DC L1
ENSG00000151176 PLBD2 470884 sc-eQTL 2.43e-01 -0.216 0.184 0.052 DC L1
ENSG00000166578 IQCD 608356 sc-eQTL 1.77e-02 0.394 0.165 0.052 DC L1
ENSG00000186815 TPCN1 608400 sc-eQTL 5.24e-01 0.0958 0.15 0.052 DC L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089060 SLC8B1 469957 sc-eQTL 9.89e-01 0.0028 0.2 0.051 CD8_TCM L2
ENSG00000089127 OAS1 922667 sc-eQTL 1.77e-01 0.235 0.174 0.051 CD8_TCM L2
ENSG00000111331 OAS3 891006 sc-eQTL 1.77e-01 0.279 0.206 0.051 CD8_TCM L2
ENSG00000111335 OAS2 851055 sc-eQTL 3.15e-02 0.362 0.167 0.051 CD8_TCM L2
ENSG00000122965 RBM19 -136875 sc-eQTL 2.35e-01 -0.232 0.195 0.051 CD8_TCM L2
ENSG00000123064 DDX54 643971 sc-eQTL 7.18e-01 -0.0795 0.22 0.051 CD8_TCM L2
ENSG00000139405 RITA1 643924 sc-eQTL 9.25e-01 0.0195 0.208 0.051 CD8_TCM L2
ENSG00000151176 PLBD2 470884 sc-eQTL 8.30e-01 -0.0457 0.212 0.051 CD8_TCM L2
ENSG00000186815 TPCN1 608400 sc-eQTL 4.93e-01 0.143 0.208 0.051 CD8_TCM L2
ENSG00000089060 SLC8B1 469957 sc-eQTL 2.42e-01 0.236 0.201 0.051 NK_CD56bright L2
ENSG00000089127 OAS1 922667 sc-eQTL 4.29e-01 0.127 0.16 0.051 NK_CD56bright L2
ENSG00000111331 OAS3 891006 sc-eQTL 9.06e-01 -0.0202 0.17 0.051 NK_CD56bright L2
ENSG00000111335 OAS2 851055 sc-eQTL 7.77e-01 -0.0427 0.151 0.051 NK_CD56bright L2
ENSG00000122965 RBM19 -136875 sc-eQTL 6.59e-01 -0.0898 0.203 0.051 NK_CD56bright L2
ENSG00000123064 DDX54 643971 sc-eQTL 5.34e-01 -0.128 0.206 0.051 NK_CD56bright L2
ENSG00000139405 RITA1 643924 sc-eQTL 3.25e-02 0.441 0.205 0.051 NK_CD56bright L2
ENSG00000151176 PLBD2 470884 sc-eQTL 1.08e-02 -0.523 0.203 0.051 NK_CD56bright L2
ENSG00000089060 SLC8B1 469957 sc-eQTL 7.82e-01 0.0545 0.197 0.05 NK_HLA L2
ENSG00000089127 OAS1 922667 sc-eQTL 2.38e-01 0.205 0.173 0.05 NK_HLA L2
ENSG00000111331 OAS3 891006 sc-eQTL 5.47e-01 0.109 0.181 0.05 NK_HLA L2
ENSG00000111335 OAS2 851055 sc-eQTL 1.26e-01 -0.269 0.175 0.05 NK_HLA L2
ENSG00000122965 RBM19 -136875 sc-eQTL 7.62e-01 -0.0613 0.202 0.05 NK_HLA L2
ENSG00000123064 DDX54 643971 sc-eQTL 5.73e-01 -0.121 0.214 0.05 NK_HLA L2
ENSG00000139405 RITA1 643924 sc-eQTL 7.73e-01 0.0596 0.207 0.05 NK_HLA L2
ENSG00000151176 PLBD2 470884 sc-eQTL 4.57e-01 0.152 0.204 0.05 NK_HLA L2
ENSG00000089060 SLC8B1 469957 sc-eQTL 6.02e-01 0.119 0.228 0.059 PB L2
ENSG00000089127 OAS1 922667 sc-eQTL 9.53e-01 -0.00959 0.163 0.059 PB L2
ENSG00000111331 OAS3 891006 sc-eQTL 6.73e-01 -0.0814 0.192 0.059 PB L2
ENSG00000111335 OAS2 851055 sc-eQTL 6.47e-01 -0.0787 0.171 0.059 PB L2
ENSG00000122965 RBM19 -136875 sc-eQTL 1.55e-02 0.554 0.225 0.059 PB L2
ENSG00000123064 DDX54 643971 sc-eQTL 7.95e-01 -0.06 0.23 0.059 PB L2
ENSG00000135144 DTX1 772741 sc-eQTL 3.57e-01 -0.189 0.204 0.059 PB L2
ENSG00000139405 RITA1 643924 sc-eQTL 8.73e-01 0.0273 0.17 0.059 PB L2
ENSG00000151176 PLBD2 470884 sc-eQTL 4.97e-01 -0.148 0.217 0.059 PB L2
ENSG00000186815 TPCN1 608400 sc-eQTL 4.62e-01 0.165 0.223 0.059 PB L2
ENSG00000089060 SLC8B1 469957 sc-eQTL 6.62e-01 -0.0885 0.202 0.05 Pro_T L2
ENSG00000089127 OAS1 922667 sc-eQTL 2.57e-01 0.139 0.122 0.05 Pro_T L2
ENSG00000111331 OAS3 891006 sc-eQTL 7.23e-01 -0.0613 0.173 0.05 Pro_T L2
ENSG00000111335 OAS2 851055 sc-eQTL 7.12e-01 0.0544 0.147 0.05 Pro_T L2
ENSG00000122965 RBM19 -136875 sc-eQTL 9.33e-01 0.0163 0.193 0.05 Pro_T L2
ENSG00000123064 DDX54 643971 sc-eQTL 3.89e-01 -0.15 0.173 0.05 Pro_T L2
ENSG00000135144 DTX1 772741 sc-eQTL 4.11e-02 -0.313 0.152 0.05 Pro_T L2
ENSG00000139405 RITA1 643924 sc-eQTL 8.12e-01 -0.0434 0.182 0.05 Pro_T L2
ENSG00000151176 PLBD2 470884 sc-eQTL 8.41e-01 0.0401 0.199 0.05 Pro_T L2
ENSG00000186815 TPCN1 608400 sc-eQTL 8.08e-01 -0.0439 0.181 0.05 Pro_T L2
ENSG00000089060 SLC8B1 469957 sc-eQTL 3.96e-01 -0.18 0.211 0.051 intMono L2
ENSG00000089127 OAS1 922667 sc-eQTL 4.34e-01 -0.0907 0.116 0.051 intMono L2
ENSG00000111331 OAS3 891006 sc-eQTL 8.00e-01 -0.0379 0.15 0.051 intMono L2
ENSG00000111335 OAS2 851055 sc-eQTL 7.27e-01 0.0517 0.148 0.051 intMono L2
ENSG00000122965 RBM19 -136875 sc-eQTL 4.05e-01 0.162 0.194 0.051 intMono L2
ENSG00000123064 DDX54 643971 sc-eQTL 8.74e-01 0.0297 0.187 0.051 intMono L2
ENSG00000139405 RITA1 643924 sc-eQTL 9.28e-01 -0.0189 0.208 0.051 intMono L2
ENSG00000139410 SDSL 407070 sc-eQTL 6.80e-01 0.0843 0.204 0.051 intMono L2
ENSG00000151176 PLBD2 470884 sc-eQTL 1.74e-01 0.255 0.187 0.051 intMono L2
ENSG00000186815 TPCN1 608400 sc-eQTL 1.94e-01 0.215 0.165 0.051 intMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000122965 RBM19 -136875 eQTL 0.0043 0.0735 0.0257 0.0 0.0 0.052

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina