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Genes within 1Mb (chr12:113507851:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089060 SLC8B1 148358 sc-eQTL 7.73e-01 0.0598 0.207 0.051 CD8_TCM L2
ENSG00000089127 OAS1 601068 sc-eQTL 2.18e-01 -0.222 0.179 0.051 CD8_TCM L2
ENSG00000111331 OAS3 569407 sc-eQTL 2.88e-01 -0.227 0.213 0.051 CD8_TCM L2
ENSG00000111335 OAS2 529456 sc-eQTL 9.14e-01 -0.0189 0.174 0.051 CD8_TCM L2
ENSG00000122965 RBM19 -458474 sc-eQTL 8.94e-01 -0.0268 0.202 0.051 CD8_TCM L2
ENSG00000123064 DDX54 322372 sc-eQTL 8.21e-01 0.0516 0.227 0.051 CD8_TCM L2
ENSG00000139405 RITA1 322325 sc-eQTL 8.93e-01 0.0288 0.215 0.051 CD8_TCM L2
ENSG00000151176 PLBD2 149285 sc-eQTL 1.68e-01 -0.302 0.218 0.051 CD8_TCM L2
ENSG00000186815 TPCN1 286801 sc-eQTL 7.53e-01 0.0678 0.215 0.051 CD8_TCM L2
ENSG00000089060 SLC8B1 148358 sc-eQTL 5.77e-01 0.11 0.198 0.053 NK_HLA L2
ENSG00000089127 OAS1 601068 sc-eQTL 2.94e-01 -0.183 0.174 0.053 NK_HLA L2
ENSG00000111331 OAS3 569407 sc-eQTL 5.37e-01 -0.112 0.182 0.053 NK_HLA L2
ENSG00000111335 OAS2 529456 sc-eQTL 9.31e-01 0.0154 0.177 0.053 NK_HLA L2
ENSG00000122965 RBM19 -458474 sc-eQTL 2.11e-02 0.465 0.2 0.053 NK_HLA L2
ENSG00000123064 DDX54 322372 sc-eQTL 6.70e-01 0.0919 0.216 0.053 NK_HLA L2
ENSG00000139405 RITA1 322325 sc-eQTL 5.35e-01 0.129 0.208 0.053 NK_HLA L2
ENSG00000151176 PLBD2 149285 sc-eQTL 4.71e-01 0.148 0.206 0.053 NK_HLA L2
ENSG00000089060 SLC8B1 148358 sc-eQTL 1.34e-01 0.32 0.212 0.05 Pro_T L2
ENSG00000089127 OAS1 601068 sc-eQTL 6.88e-01 0.052 0.129 0.05 Pro_T L2
ENSG00000111331 OAS3 569407 sc-eQTL 8.55e-01 0.0334 0.183 0.05 Pro_T L2
ENSG00000111335 OAS2 529456 sc-eQTL 6.00e-01 0.0816 0.155 0.05 Pro_T L2
ENSG00000122965 RBM19 -458474 sc-eQTL 2.91e-01 0.216 0.204 0.05 Pro_T L2
ENSG00000123064 DDX54 322372 sc-eQTL 1.16e-01 0.288 0.182 0.05 Pro_T L2
ENSG00000135144 DTX1 451142 sc-eQTL 9.64e-01 -0.00742 0.163 0.05 Pro_T L2
ENSG00000139405 RITA1 322325 sc-eQTL 2.54e-01 0.22 0.192 0.05 Pro_T L2
ENSG00000151176 PLBD2 149285 sc-eQTL 6.04e-01 -0.109 0.21 0.05 Pro_T L2
ENSG00000186815 TPCN1 286801 sc-eQTL 7.45e-01 -0.0622 0.191 0.05 Pro_T L2
ENSG00000089060 SLC8B1 148358 sc-eQTL 2.19e-01 0.273 0.221 0.051 cDC L2
ENSG00000089127 OAS1 601068 sc-eQTL 2.81e-01 -0.167 0.154 0.051 cDC L2
ENSG00000089169 RPH3A 937471 sc-eQTL 2.29e-01 0.226 0.188 0.051 cDC L2
ENSG00000111331 OAS3 569407 sc-eQTL 5.19e-01 0.0996 0.154 0.051 cDC L2
ENSG00000111335 OAS2 529456 sc-eQTL 5.54e-01 0.104 0.175 0.051 cDC L2
ENSG00000122965 RBM19 -458474 sc-eQTL 1.45e-01 0.323 0.221 0.051 cDC L2
ENSG00000123064 DDX54 322372 sc-eQTL 8.94e-01 0.0284 0.213 0.051 cDC L2
ENSG00000135094 SDS 81550 sc-eQTL 9.14e-01 -0.0201 0.186 0.051 cDC L2
ENSG00000139405 RITA1 322325 sc-eQTL 1.84e-01 0.278 0.208 0.051 cDC L2
ENSG00000139410 SDSL 85471 sc-eQTL 2.99e-01 -0.205 0.197 0.051 cDC L2
ENSG00000151176 PLBD2 149285 sc-eQTL 6.65e-02 0.396 0.215 0.051 cDC L2
ENSG00000166578 IQCD 286757 sc-eQTL 9.68e-01 -0.00735 0.184 0.051 cDC L2
ENSG00000186815 TPCN1 286801 sc-eQTL 6.23e-01 0.0793 0.161 0.051 cDC L2
ENSG00000089060 SLC8B1 148358 sc-eQTL 9.45e-02 0.381 0.227 0.052 gdT L2
ENSG00000089127 OAS1 601068 sc-eQTL 8.66e-01 -0.0365 0.216 0.052 gdT L2
ENSG00000111331 OAS3 569407 sc-eQTL 8.10e-01 -0.0587 0.243 0.052 gdT L2
ENSG00000111335 OAS2 529456 sc-eQTL 5.90e-02 -0.372 0.196 0.052 gdT L2
ENSG00000122965 RBM19 -458474 sc-eQTL 2.99e-02 0.528 0.241 0.052 gdT L2
ENSG00000123064 DDX54 322372 sc-eQTL 1.88e-01 -0.337 0.254 0.052 gdT L2
ENSG00000135144 DTX1 451142 sc-eQTL 2.75e-01 0.221 0.202 0.052 gdT L2
ENSG00000139405 RITA1 322325 sc-eQTL 6.15e-01 0.131 0.26 0.052 gdT L2
ENSG00000151176 PLBD2 149285 sc-eQTL 7.07e-01 -0.0867 0.231 0.052 gdT L2
ENSG00000186815 TPCN1 286801 sc-eQTL 9.82e-01 0.00544 0.235 0.052 gdT L2
ENSG00000089060 SLC8B1 148358 sc-eQTL 9.09e-01 -0.0238 0.208 0.051 intMono L2
ENSG00000089127 OAS1 601068 sc-eQTL 7.88e-01 -0.0308 0.114 0.051 intMono L2
ENSG00000089169 RPH3A 937471 sc-eQTL 8.77e-01 -0.0296 0.191 0.051 intMono L2
ENSG00000111331 OAS3 569407 sc-eQTL 9.61e-01 0.00726 0.147 0.051 intMono L2
ENSG00000111335 OAS2 529456 sc-eQTL 8.84e-01 0.0213 0.145 0.051 intMono L2
ENSG00000122965 RBM19 -458474 sc-eQTL 4.22e-01 0.154 0.191 0.051 intMono L2
ENSG00000123064 DDX54 322372 sc-eQTL 3.97e-02 -0.377 0.182 0.051 intMono L2
ENSG00000139405 RITA1 322325 sc-eQTL 4.77e-01 -0.146 0.205 0.051 intMono L2
ENSG00000139410 SDSL 85471 sc-eQTL 2.50e-01 0.231 0.2 0.051 intMono L2
ENSG00000151176 PLBD2 149285 sc-eQTL 5.64e-02 -0.351 0.183 0.051 intMono L2
ENSG00000186815 TPCN1 286801 sc-eQTL 3.89e-01 -0.141 0.163 0.051 intMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089169 RPH3A 937471 eQTL 0.0498 0.163 0.0828 0.0 0.0 0.0334
ENSG00000135144 DTX1 451142 eQTL 0.0459 0.0906 0.0453 0.0 0.0 0.0334
ENSG00000186710 CFAP73 357993 eQTL 0.0232 0.204 0.0895 0.0 0.0 0.0334

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089060 \N 148358 4.24e-06 4.6e-06 8.24e-07 2e-06 1.06e-06 1.23e-06 2.95e-06 9.62e-07 3.32e-06 1.99e-06 4.34e-06 3.11e-06 6.49e-06 1.9e-06 1.2e-06 2.38e-06 2.02e-06 2.54e-06 1.36e-06 9.54e-07 2.28e-06 4.1e-06 3.49e-06 1.81e-06 4.89e-06 1.32e-06 2e-06 1.51e-06 4.15e-06 3.81e-06 1.89e-06 5.76e-07 8.13e-07 1.73e-06 1.94e-06 8.35e-07 9.82e-07 4.76e-07 1.23e-06 4.17e-07 3.61e-07 4.85e-06 4.35e-07 1.67e-07 4.33e-07 3.92e-07 7.44e-07 4.41e-07 3.35e-07