Genes within 1Mb (chr12:113439313:G:A):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089060 SLC8B1 79820 sc-eQTL 6.18e-01 -0.121 0.242 0.051 pDC L2
ENSG00000089127 OAS1 532530 sc-eQTL 7.87e-01 0.0427 0.158 0.051 pDC L2
ENSG00000089169 RPH3A 868933 sc-eQTL 2.50e-01 -0.208 0.18 0.051 pDC L2
ENSG00000111331 OAS3 500869 sc-eQTL 8.05e-02 -0.331 0.188 0.051 pDC L2
ENSG00000111335 OAS2 460918 sc-eQTL 7.92e-01 0.0537 0.203 0.051 pDC L2
ENSG00000122965 RBM19 -527012 sc-eQTL 6.12e-01 -0.117 0.231 0.051 pDC L2
ENSG00000123064 DDX54 253834 sc-eQTL 7.40e-01 -0.0783 0.235 0.051 pDC L2
ENSG00000135094 SDS 13012 sc-eQTL 8.73e-01 -0.0274 0.17 0.051 pDC L2
ENSG00000139405 RITA1 253787 sc-eQTL 8.44e-01 0.0468 0.237 0.051 pDC L2
ENSG00000139410 SDSL 16933 sc-eQTL 1.70e-01 0.319 0.231 0.051 pDC L2
ENSG00000151176 PLBD2 80747 sc-eQTL 6.25e-01 -0.119 0.243 0.051 pDC L2
ENSG00000166578 IQCD 218219 sc-eQTL 4.22e-01 0.15 0.186 0.051 pDC L2
ENSG00000186815 TPCN1 218263 sc-eQTL 3.02e-01 0.228 0.22 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000135094 SDS 13012 eQTL 4.31e-06 -0.316 0.0684 0.0 0.0 0.0447
ENSG00000139410 SDSL 16933 eQTL 9.01e-18 0.43 0.0491 0.0 0.0 0.0447


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111335 \N 460918 6.33e-07 4.24e-07 7.72e-08 3.19e-07 1.07e-07 1.57e-07 4.25e-07 9.69e-08 2.81e-07 1.89e-07 4.13e-07 3.08e-07 4.34e-07 1.07e-07 1.68e-07 1.76e-07 1.35e-07 3.02e-07 1.51e-07 1.31e-07 1.68e-07 2.7e-07 2.77e-07 1.17e-07 5.15e-07 2.2e-07 2.23e-07 2.24e-07 2.19e-07 2.52e-07 1.93e-07 7.03e-08 5.86e-08 1.21e-07 1.76e-07 7.56e-08 1e-07 5.36e-08 5.98e-08 7.5e-08 2.84e-08 4.02e-07 2.28e-08 1.75e-08 8.24e-08 1.37e-08 9.83e-08 3.25e-09 5.54e-08
ENSG00000122965 \N -527012 3.92e-07 2.56e-07 6.86e-08 2.54e-07 1.05e-07 1.28e-07 3.25e-07 7.46e-08 2.12e-07 1.28e-07 2.47e-07 1.91e-07 2.94e-07 8.55e-08 1.07e-07 1.14e-07 7.3e-08 2.43e-07 8.68e-08 7.54e-08 1.35e-07 2.07e-07 2.04e-07 5.01e-08 3.27e-07 1.82e-07 1.48e-07 1.69e-07 1.48e-07 1.59e-07 1.39e-07 6.87e-08 4.76e-08 1.01e-07 7.44e-08 5.23e-08 6.48e-08 7.92e-08 5.27e-08 8.2e-08 5.39e-08 2.65e-07 3.65e-08 1.54e-08 5.32e-08 8.07e-09 9.1e-08 0.0 4.68e-08
ENSG00000135094 SDS 13012 2.13e-05 2.26e-05 4.26e-06 1.24e-05 3.7e-06 1.02e-05 2.88e-05 3.59e-06 1.97e-05 1.02e-05 2.66e-05 1.01e-05 3.59e-05 9.13e-06 5.36e-06 1.18e-05 1.1e-05 1.81e-05 6.06e-06 5.3e-06 9.96e-06 2.18e-05 2.15e-05 7.31e-06 3.13e-05 5.83e-06 8.36e-06 8.98e-06 2.16e-05 2.06e-05 1.33e-05 1.58e-06 2.04e-06 5.98e-06 8.83e-06 4.55e-06 2.62e-06 2.81e-06 3.71e-06 2.88e-06 1.67e-06 2.78e-05 2.64e-06 2.86e-07 2e-06 2.75e-06 3.42e-06 1.52e-06 1.32e-06
ENSG00000139410 SDSL 16933 1.67e-05 1.99e-05 3.46e-06 1.11e-05 3.08e-06 8.57e-06 2.37e-05 3.39e-06 1.73e-05 9.14e-06 2.29e-05 8.71e-06 3.17e-05 7.58e-06 5.15e-06 1.03e-05 9.2e-06 1.56e-05 5.04e-06 4.69e-06 8.78e-06 1.81e-05 1.8e-05 6.06e-06 2.78e-05 5.5e-06 8.02e-06 8.02e-06 1.8e-05 1.74e-05 1.24e-05 1.24e-06 1.68e-06 5.09e-06 7.79e-06 4.22e-06 2.18e-06 2.71e-06 3.33e-06 2.54e-06 1.48e-06 2.39e-05 2.72e-06 2.71e-07 1.85e-06 2.79e-06 3e-06 1.31e-06 1.04e-06
ENSG00000186710 \N 289455 1.34e-06 9.48e-07 2.81e-07 6.31e-07 2.43e-07 4.63e-07 1.13e-06 3.46e-07 1.15e-06 3.71e-07 1.41e-06 5.64e-07 1.57e-06 2.57e-07 4.55e-07 7.17e-07 7.96e-07 5.54e-07 4.95e-07 6.61e-07 3.87e-07 1.08e-06 7.52e-07 5.79e-07 1.94e-06 2.99e-07 6.91e-07 7.2e-07 9.32e-07 1e-06 5.39e-07 1.3e-07 1.78e-07 3.91e-07 4.2e-07 4.47e-07 3.96e-07 1.37e-07 1.49e-07 6.46e-08 1.92e-07 1.59e-06 7.66e-08 2.61e-08 1.61e-07 9.77e-08 1.9e-07 8.81e-08 8.37e-08