Genes within 1Mb (chr12:113308084:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089060 SLC8B1 -51409 eQTL 5.81e-94 0.501 0.0217 0.139 0.124 0.246
ENSG00000089169 RPH3A 737704 eQTL 2.75e-02 0.075 0.034 0.0 0.0 0.246
ENSG00000111331 OAS3 369640 eQTL 2.61e-03 -0.0445 0.0147 0.0 0.0 0.246
ENSG00000111335 OAS2 329689 eQTL 1.26e-03 -0.0425 0.0131 0.0 0.0 0.246
ENSG00000111344 RASAL1 171845 eQTL 4.19e-37 0.539 0.0405 0.0 0.0 0.246
ENSG00000123064 DDX54 122605 eQTL 6.51e-18 -0.104 0.0118 0.0 0.0 0.246
ENSG00000135094 SDS -118217 eQTL 2.24e-02 -0.077 0.0337 0.0 0.0 0.246
ENSG00000139405 RITA1 122558 eQTL 5.40e-76 -0.374 0.0185 0.0 0.0 0.246
ENSG00000139410 SDSL -114296 eQTL 5.86e-04 -0.0855 0.0248 0.0 0.0 0.246
ENSG00000151176 PLBD2 -50482 eQTL 4.66e-09 0.0824 0.0139 0.0 0.0 0.246
ENSG00000186710 CFAP73 158226 eQTL 2.76e-07 0.188 0.0363 0.0 0.0 0.246


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089060 SLC8B1 -51409 9e-06 1.18e-05 1.36e-06 6.02e-06 2.18e-06 4.01e-06 1.04e-05 1.77e-06 8.81e-06 5.12e-06 1.24e-05 5.16e-06 1.47e-05 3.67e-06 2.33e-06 6.33e-06 4.17e-06 6.55e-06 2.58e-06 2.76e-06 4.97e-06 9.54e-06 7.62e-06 3.17e-06 1.49e-05 3.49e-06 5.04e-06 3.97e-06 9.57e-06 8e-06 5.42e-06 8.89e-07 1.09e-06 3.12e-06 3.88e-06 2.28e-06 1.71e-06 1.83e-06 1.82e-06 9.87e-07 8.43e-07 1.35e-05 1.29e-06 1.38e-07 6.94e-07 1.75e-06 1.21e-06 7.42e-07 4.78e-07
ENSG00000111344 RASAL1 171845 1.91e-06 2.67e-06 2.91e-07 1.53e-06 4.22e-07 6.47e-07 1.34e-06 4.32e-07 1.71e-06 7.04e-07 1.86e-06 1.28e-06 3.04e-06 9.92e-07 3.86e-07 1.24e-06 1.1e-06 1.21e-06 5.45e-07 5.67e-07 6.64e-07 2.02e-06 1.65e-06 7.85e-07 3.07e-06 9.36e-07 1.11e-06 1.07e-06 1.74e-06 1.61e-06 7.46e-07 2.56e-07 3.21e-07 8.91e-07 8.23e-07 6.14e-07 6.87e-07 3.58e-07 5.35e-07 2.99e-07 3.04e-07 3.06e-06 4.36e-07 1.99e-07 2.62e-07 2.95e-07 2.68e-07 1.16e-07 1.56e-07
ENSG00000123064 DDX54 122605 3.97e-06 4.55e-06 5.96e-07 1.79e-06 6.1e-07 7.26e-07 2.5e-06 8.51e-07 2.44e-06 1.4e-06 3.49e-06 1.95e-06 5.6e-06 1.49e-06 9.62e-07 2.21e-06 1.56e-06 2.17e-06 1.57e-06 1.39e-06 1.39e-06 3.65e-06 3.44e-06 1.46e-06 4.97e-06 1.28e-06 1.86e-06 1.69e-06 3.45e-06 2.94e-06 1.94e-06 3.8e-07 6.13e-07 1.65e-06 1.65e-06 9.75e-07 9.25e-07 4.18e-07 1.37e-06 3.55e-07 3.05e-07 4.9e-06 5.44e-07 1.87e-07 3.75e-07 3.38e-07 8.29e-07 2.32e-07 2.14e-07
ENSG00000139405 RITA1 122558 3.97e-06 4.55e-06 5.96e-07 1.79e-06 6.12e-07 7.26e-07 2.5e-06 8.51e-07 2.44e-06 1.4e-06 3.55e-06 1.95e-06 5.6e-06 1.49e-06 9.62e-07 2.21e-06 1.58e-06 2.17e-06 1.57e-06 1.39e-06 1.39e-06 3.74e-06 3.38e-06 1.46e-06 4.97e-06 1.28e-06 1.82e-06 1.69e-06 3.45e-06 2.94e-06 1.98e-06 3.8e-07 6.13e-07 1.65e-06 1.65e-06 9.75e-07 9.25e-07 4.18e-07 1.37e-06 3.55e-07 3.05e-07 4.9e-06 5.44e-07 1.87e-07 3.62e-07 3.38e-07 8.29e-07 2.32e-07 2.14e-07
ENSG00000139410 SDSL -114296 4.16e-06 4.91e-06 6.89e-07 2.44e-06 7.73e-07 9.66e-07 2.84e-06 8.79e-07 2.88e-06 1.67e-06 4.34e-06 2.52e-06 6.61e-06 2.04e-06 9.2e-07 2.56e-06 1.85e-06 2.12e-06 1.42e-06 1.26e-06 1.8e-06 4.26e-06 3.47e-06 1.8e-06 5.24e-06 1.14e-06 2.18e-06 1.46e-06 3.81e-06 3.39e-06 2.05e-06 4.52e-07 6.45e-07 1.74e-06 1.8e-06 9.52e-07 9.08e-07 3.97e-07 1.3e-06 3.8e-07 1.67e-07 5.71e-06 4.47e-07 1.68e-07 3.22e-07 3.93e-07 8.96e-07 2e-07 2.13e-07
ENSG00000151176 PLBD2 -50482 9.27e-06 1.18e-05 1.34e-06 6.11e-06 2.26e-06 4.22e-06 1.03e-05 1.79e-06 9.1e-06 4.96e-06 1.24e-05 5.26e-06 1.51e-05 3.65e-06 2.39e-06 6.51e-06 4.11e-06 6.67e-06 2.67e-06 2.8e-06 5.06e-06 9.57e-06 7.76e-06 3.3e-06 1.53e-05 3.68e-06 5.24e-06 4.05e-06 9.77e-06 8.12e-06 5.43e-06 9.58e-07 1.1e-06 3.06e-06 4.02e-06 2.28e-06 1.74e-06 1.84e-06 1.94e-06 1.03e-06 8.23e-07 1.37e-05 1.35e-06 1.47e-07 6.74e-07 1.82e-06 1.25e-06 7.66e-07 4.89e-07
ENSG00000186710 CFAP73 158226 2.22e-06 2.47e-06 2.31e-07 1.7e-06 4.89e-07 8.22e-07 1.48e-06 4.28e-07 1.66e-06 7.2e-07 2.1e-06 1.47e-06 3.58e-06 1.4e-06 4.36e-07 1.48e-06 1.05e-06 1.44e-06 6.34e-07 7.37e-07 6.7e-07 2.75e-06 1.95e-06 9.16e-07 3.59e-06 1.13e-06 1.21e-06 1.35e-06 1.76e-06 1.67e-06 1.08e-06 2.83e-07 3.75e-07 1.1e-06 8.8e-07 6.4e-07 7.01e-07 3.27e-07 6.97e-07 2.44e-07 2.58e-07 3.43e-06 4.81e-07 1.9e-07 2.84e-07 3.29e-07 3.78e-07 1.7e-07 1.93e-07