Genes within 1Mb (chr12:113233336:C:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089060 SLC8B1 -126157 eQTL 1.64e-04 0.143 0.0378 0.0 0.0 0.105
ENSG00000089169 RPH3A 662956 eQTL 3.34e-03 0.14 0.0477 0.0 0.0 0.105
ENSG00000111331 OAS3 294892 eQTL 2.05e-02 -0.0481 0.0207 0.0 0.0 0.105
ENSG00000111335 OAS2 254941 eQTL 1.30e-02 -0.046 0.0185 0.0 0.0 0.105
ENSG00000111344 RASAL1 97097 eQTL 8.94e-11 0.398 0.0606 0.0 0.0 0.105
ENSG00000135094 SDS -192965 eQTL 2.31e-04 -0.174 0.0471 0.0 0.0 0.105
ENSG00000139405 RITA1 47810 eQTL 1.35e-20 -0.283 0.0297 0.0 0.0 0.105
ENSG00000151176 PLBD2 -125230 eQTL 2.64e-02 0.0442 0.0199 0.0 0.0 0.105
ENSG00000166578 IQCD 12242 eQTL 6.96e-03 0.157 0.0581 0.00213 0.0 0.105
ENSG00000186710 CFAP73 83478 eQTL 9.21e-07 0.253 0.0511 0.00103 0.00106 0.105
ENSG00000186815 TPCN1 12286 eQTL 1.42e-12 0.168 0.0233 0.0135 0.0131 0.105


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089060 SLC8B1 -126157 1.3e-05 9.37e-06 2.51e-06 4.01e-06 2.14e-06 4.1e-06 9.57e-06 9.93e-07 8.38e-06 3.02e-06 9.71e-06 4.74e-06 1.5e-05 2.7e-06 1.01e-06 4.76e-06 4.09e-06 3.71e-06 2.58e-06 2.65e-06 3.15e-06 7.94e-06 9.75e-06 2.68e-06 1.25e-05 3.98e-06 2.51e-06 1.75e-06 7.85e-06 8.12e-06 4.24e-06 3.45e-07 7.66e-07 3.29e-06 2.54e-06 2.85e-06 1.74e-06 1.56e-06 1.37e-06 7.42e-07 9.12e-07 1.3e-05 3.87e-06 1.59e-07 6.11e-07 1.29e-06 9.63e-07 7.44e-07 3.23e-07
ENSG00000111331 OAS3 294892 2.08e-06 1e-06 3.3e-07 5.92e-07 2.31e-07 6.01e-07 1.58e-06 5.56e-08 1.48e-06 2.28e-07 1.67e-06 5.73e-07 2.49e-06 2.57e-07 3.08e-07 5.7e-07 8.43e-07 5.67e-07 8.67e-07 6.39e-07 3.24e-07 1.38e-06 1.14e-06 6.33e-07 2.23e-06 2.7e-07 2.72e-07 4.06e-07 1.5e-06 1.64e-06 6.76e-07 2.93e-08 6.78e-08 6.83e-07 3.42e-07 6.02e-07 6.69e-07 1.14e-07 1.41e-07 2.28e-08 1.16e-07 1.47e-06 3.83e-07 1.05e-08 8.24e-08 7.91e-08 9.23e-08 0.0 4.94e-08
ENSG00000111335 OAS2 254941 3.31e-06 1.58e-06 6.04e-07 1.26e-06 3.48e-07 6.42e-07 1.25e-06 7.65e-08 1.72e-06 3.05e-07 2.06e-06 7.43e-07 3.11e-06 2.96e-07 4.12e-07 8.19e-07 9.41e-07 6.94e-07 5.6e-07 4.83e-07 7.16e-07 1.97e-06 1.87e-06 6.51e-07 2.5e-06 6.16e-07 4.97e-07 7.22e-07 1.66e-06 2e-06 8.46e-07 4.69e-08 2.29e-07 7.25e-07 5.9e-07 1.01e-06 7.89e-07 2.38e-07 4.99e-07 8.98e-08 2.85e-07 2.04e-06 7.19e-07 1.29e-08 1.67e-07 1.85e-07 8.84e-08 2.41e-08 4.83e-08
ENSG00000111344 RASAL1 97097 2.47e-05 1.46e-05 3.68e-06 5.99e-06 2.4e-06 5.6e-06 1.44e-05 1.15e-06 1.18e-05 5.03e-06 1.41e-05 6.14e-06 2.5e-05 3.65e-06 3.14e-06 6.66e-06 7.73e-06 7.55e-06 3.64e-06 2.99e-06 5.14e-06 1.18e-05 1.77e-05 3.39e-06 2e-05 5.11e-06 4.22e-06 3.74e-06 1.34e-05 1.16e-05 6.81e-06 4.03e-07 1.27e-06 3.7e-06 4.62e-06 4.06e-06 1.76e-06 1.93e-06 2.19e-06 1.04e-06 1.04e-06 2.31e-05 4.93e-06 1.7e-07 8.14e-07 1.71e-06 1.19e-06 8.29e-07 5.22e-07
ENSG00000135094 SDS -192965 5.1e-06 3.99e-06 6.33e-07 1.97e-06 6.17e-07 9.88e-07 2.48e-06 3.28e-07 3.32e-06 7.36e-07 3.32e-06 1.68e-06 7.24e-06 1.38e-06 4.72e-07 1.54e-06 1.56e-06 2.18e-06 1.33e-06 1.2e-06 1.16e-06 3.43e-06 3.78e-06 1.84e-06 4.77e-06 1.17e-06 1.02e-06 1.46e-06 3.87e-06 4.33e-06 1.98e-06 4.03e-08 4.74e-07 1.87e-06 1.26e-06 1.29e-06 1.11e-06 4.25e-07 1.23e-06 3.54e-07 2.54e-07 4.74e-06 1.68e-06 1.74e-07 3.26e-07 3.58e-07 2.36e-07 2.54e-07 6.32e-08
ENSG00000139405 RITA1 47810 6.76e-05 3.3e-05 6.45e-06 9.98e-06 5.23e-06 1.26e-05 3.36e-05 2.14e-06 1.97e-05 7.9e-06 2.96e-05 8.78e-06 4.49e-05 6.86e-06 5.08e-06 1.05e-05 1.56e-05 1.52e-05 4.98e-06 4.29e-06 8.49e-06 2.37e-05 3.46e-05 5.19e-06 3.26e-05 6.6e-06 7.69e-06 6.91e-06 2.61e-05 2.05e-05 1.29e-05 9.46e-07 1.55e-06 4.94e-06 7.96e-06 5.77e-06 1.72e-06 2.45e-06 2.8e-06 1.38e-06 9.92e-07 4.79e-05 6.45e-06 1.88e-07 1.97e-06 2.79e-06 2.95e-06 1.23e-06 6.07e-07
ENSG00000186710 CFAP73 83478 3.49e-05 1.9e-05 4.6e-06 6.7e-06 3.03e-06 6.32e-06 1.96e-05 1.25e-06 1.45e-05 5.73e-06 1.76e-05 6.6e-06 3.06e-05 4.21e-06 3.88e-06 8.18e-06 8.74e-06 9.51e-06 4.11e-06 3.27e-06 6.52e-06 1.39e-05 2.27e-05 3.81e-06 2.4e-05 5.41e-06 4.75e-06 4.61e-06 1.59e-05 1.36e-05 8.77e-06 4.88e-07 1.09e-06 4.02e-06 5.39e-06 4.5e-06 1.76e-06 1.99e-06 2.01e-06 9.79e-07 1.04e-06 3.1e-05 5.16e-06 1.33e-07 9.39e-07 2.35e-06 1.78e-06 1.14e-06 4.81e-07
ENSG00000186815 TPCN1 12286 0.000109 5.79e-05 8.32e-06 1.72e-05 6.55e-06 2.05e-05 6.25e-05 4.2e-06 3.76e-05 1.45e-05 5.14e-05 2.14e-05 7.6e-05 1.54e-05 7.32e-06 2.67e-05 2.85e-05 3.03e-05 8.86e-06 6.18e-06 1.84e-05 4.86e-05 5.2e-05 1.04e-05 5.4e-05 1.15e-05 1.56e-05 1.15e-05 4.84e-05 3.48e-05 2.74e-05 1.66e-06 3.02e-06 6.04e-06 1.3e-05 6.2e-06 2.83e-06 3.19e-06 3.6e-06 3.51e-06 1.67e-06 6.67e-05 6.76e-06 2.71e-07 2.66e-06 4.25e-06 4.68e-06 1.49e-06 1.47e-06