Genes within 1Mb (chr12:113174051:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089060 SLC8B1 -185442 eQTL 2.68e-04 0.136 0.0372 0.0 0.0 0.108
ENSG00000089169 RPH3A 603671 eQTL 2.08e-03 0.145 0.0469 0.0 0.0 0.108
ENSG00000111331 OAS3 235607 eQTL 2.18e-02 -0.0469 0.0204 0.0 0.0 0.108
ENSG00000111335 OAS2 195656 eQTL 9.54e-03 -0.0472 0.0182 0.0 0.0 0.108
ENSG00000111344 RASAL1 37812 eQTL 1.64e-11 0.406 0.0596 0.0 0.0 0.108
ENSG00000135094 SDS -252250 eQTL 6.29e-04 -0.159 0.0464 0.0 0.0 0.108
ENSG00000139405 RITA1 -11475 eQTL 5.00e-21 -0.281 0.0292 0.0 0.0 0.108
ENSG00000151176 PLBD2 -184515 eQTL 4.96e-02 0.0385 0.0196 0.0 0.0 0.108
ENSG00000166578 IQCD -47043 eQTL 5.08e-03 0.16 0.0571 0.00243 0.00117 0.108
ENSG00000186710 CFAP73 24193 eQTL 7.88e-07 0.25 0.0503 0.00105 0.00116 0.108
ENSG00000186815 TPCN1 -46999 eQTL 2.16e-12 0.164 0.023 0.00697 0.00803 0.108


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089060 SLC8B1 -185442 1.29e-06 9.82e-07 3.22e-07 1.1e-06 2.43e-07 4.76e-07 1.34e-06 3.75e-07 1.41e-06 4.28e-07 1.65e-06 6.31e-07 2.46e-06 3e-07 4.61e-07 6.7e-07 7.74e-07 6.96e-07 7.14e-07 6.36e-07 5.61e-07 1.36e-06 7.76e-07 6.47e-07 1.96e-06 2.99e-07 7.97e-07 7.74e-07 1.04e-06 1.27e-06 6.96e-07 1.88e-07 1.88e-07 7.03e-07 5.39e-07 4.8e-07 6.89e-07 1.65e-07 3.52e-07 9.61e-09 9.91e-08 1.5e-06 4.11e-07 1.89e-07 2.01e-07 1.27e-07 1.9e-07 7.81e-08 2.82e-07
ENSG00000111331 OAS3 235607 1.26e-06 8.36e-07 1.58e-07 3.6e-07 1.11e-07 3.41e-07 7.1e-07 2.84e-07 8.29e-07 2.85e-07 1.12e-06 5.45e-07 1.57e-06 2.05e-07 3.72e-07 3.41e-07 5.64e-07 5.27e-07 5.7e-07 4.38e-07 2.82e-07 6.48e-07 4.74e-07 3.96e-07 1.39e-06 2.71e-07 4.97e-07 4.29e-07 5.43e-07 8.89e-07 4.65e-07 3.82e-08 1.7e-07 3.58e-07 3.28e-07 4.49e-07 5.32e-07 1.32e-07 1.24e-07 2.71e-08 3.46e-08 9.49e-07 2.9e-07 1.67e-07 1.89e-07 6.01e-08 1.08e-07 5.93e-08 1.98e-07
ENSG00000111335 OAS2 195656 1.2e-06 9.44e-07 2.81e-07 9.29e-07 1.96e-07 4.63e-07 1.16e-06 3.66e-07 1.2e-06 3.71e-07 1.39e-06 5.79e-07 2.19e-06 2.9e-07 4.36e-07 5.81e-07 7.77e-07 6.1e-07 8.19e-07 6.86e-07 4.39e-07 1.22e-06 7.39e-07 5.86e-07 1.94e-06 2.44e-07 7.06e-07 6.83e-07 9.15e-07 1.23e-06 6.18e-07 1.57e-07 2.13e-07 6.53e-07 4.49e-07 4.6e-07 7.49e-07 1.47e-07 2.9e-07 1.8e-08 8.42e-08 1.53e-06 4.42e-07 1.9e-07 1.81e-07 1.11e-07 1.77e-07 8.89e-08 2.62e-07
ENSG00000111344 RASAL1 37812 9.76e-06 1.08e-05 1.24e-06 5.17e-06 2.13e-06 4.19e-06 1.02e-05 1.8e-06 9.4e-06 4.2e-06 1.16e-05 5.14e-06 1.46e-05 3.77e-06 1.86e-06 5.65e-06 4.38e-06 6.43e-06 2.7e-06 2.85e-06 4.38e-06 8.17e-06 6.93e-06 2.87e-06 1.28e-05 3.09e-06 4.65e-06 3.34e-06 7.98e-06 7.9e-06 4.73e-06 5.87e-07 1.14e-06 2.54e-06 3.88e-06 2.09e-06 1.63e-06 1.06e-06 1.64e-06 8.46e-07 4.63e-07 1.27e-05 1.26e-06 1.9e-07 7.54e-07 9.48e-07 1e-06 7.43e-07 5.39e-07
ENSG00000135094 SDS -252250 1.25e-06 6.81e-07 1.48e-07 3.1e-07 1.1e-07 2.95e-07 6.23e-07 2.7e-07 6.92e-07 3.16e-07 1.1e-06 5.22e-07 1.48e-06 1.98e-07 3.13e-07 2.89e-07 4.87e-07 4.95e-07 4.7e-07 3.54e-07 2.26e-07 5.69e-07 4.13e-07 3.24e-07 1.14e-06 2.55e-07 4.25e-07 3.78e-07 4.39e-07 8.4e-07 4.61e-07 4.47e-08 1.28e-07 2.77e-07 3.8e-07 3.95e-07 4.92e-07 1.21e-07 7.56e-08 3.05e-08 3.68e-08 7.53e-07 1.68e-07 1.74e-07 1.99e-07 4.23e-08 1.18e-07 3.79e-08 1.68e-07
ENSG00000139405 RITA1 -11475 2.47e-05 2.67e-05 4.29e-06 1.3e-05 3.6e-06 1.04e-05 3.16e-05 3.5e-06 2.29e-05 1.02e-05 2.86e-05 1.14e-05 3.85e-05 1.03e-05 5.36e-06 1.17e-05 1.22e-05 1.88e-05 6.31e-06 5.26e-06 9.62e-06 2.31e-05 2.29e-05 6.36e-06 3.35e-05 5.97e-06 9.03e-06 8.98e-06 2.28e-05 2.02e-05 1.38e-05 1.47e-06 2.02e-06 4.87e-06 8.98e-06 4.51e-06 2.42e-06 2.82e-06 3.61e-06 2.38e-06 1.29e-06 3.02e-05 2.64e-06 3.24e-07 1.93e-06 2.8e-06 3.25e-06 1.24e-06 1.27e-06
ENSG00000166578 IQCD -47043 7.94e-06 9.42e-06 7.59e-07 4.27e-06 1.71e-06 3.41e-06 9.6e-06 1.34e-06 6.53e-06 3.43e-06 9.18e-06 4.28e-06 1.16e-05 3.86e-06 1.03e-06 4.31e-06 3.67e-06 3.95e-06 2.27e-06 2.44e-06 2.89e-06 7.51e-06 5.5e-06 2.01e-06 1.03e-05 2.25e-06 3.74e-06 2.34e-06 6.6e-06 7.83e-06 3.94e-06 4.9e-07 6.66e-07 2.02e-06 2.92e-06 1.71e-06 1.19e-06 4.82e-07 1.35e-06 6.22e-07 2.37e-07 1.01e-05 8.97e-07 1.58e-07 5.77e-07 1.25e-06 1.06e-06 5.67e-07 5.96e-07
ENSG00000186710 CFAP73 24193 1.39e-05 1.52e-05 2.32e-06 8.21e-06 2.36e-06 5.91e-06 1.64e-05 2.21e-06 1.37e-05 5.92e-06 1.67e-05 6.79e-06 2.38e-05 5.19e-06 3.62e-06 6.98e-06 7.26e-06 1.04e-05 3.64e-06 3.3e-06 6.52e-06 1.2e-05 1.16e-05 3.52e-06 2.1e-05 4.26e-06 6.94e-06 5.22e-06 1.33e-05 1.19e-05 7.73e-06 1.06e-06 1.27e-06 3.24e-06 5.46e-06 2.8e-06 1.78e-06 1.96e-06 2.01e-06 1.03e-06 8.2e-07 1.8e-05 1.61e-06 2.5e-07 7.98e-07 1.77e-06 1.47e-06 7.8e-07 4.63e-07
ENSG00000186815 TPCN1 -46999 7.94e-06 9.42e-06 7.77e-07 4.27e-06 1.71e-06 3.41e-06 9.67e-06 1.34e-06 6.53e-06 3.43e-06 9.18e-06 4.28e-06 1.16e-05 3.86e-06 1.03e-06 4.31e-06 3.67e-06 3.95e-06 2.26e-06 2.44e-06 2.89e-06 7.51e-06 5.5e-06 2.01e-06 1.02e-05 2.25e-06 3.74e-06 2.34e-06 6.6e-06 7.83e-06 3.94e-06 4.9e-07 6.66e-07 2.02e-06 2.92e-06 1.71e-06 1.19e-06 4.82e-07 1.35e-06 6.22e-07 2.37e-07 1.01e-05 8.97e-07 1.58e-07 5.77e-07 1.25e-06 1.06e-06 5.67e-07 5.96e-07