Genes within 1Mb (chr12:112732995:T:G):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089009 RPL6 314157 sc-eQTL 7.62e-01 -0.0341 0.113 0.059 PB L2
ENSG00000089022 MAPKAPK5 890767 sc-eQTL 9.57e-01 -0.0131 0.245 0.059 PB L2
ENSG00000089060 SLC8B1 -626498 sc-eQTL 5.36e-01 -0.144 0.233 0.059 PB L2
ENSG00000089127 OAS1 -173788 sc-eQTL 7.95e-01 -0.0434 0.166 0.059 PB L2
ENSG00000089248 ERP29 719647 sc-eQTL 8.34e-02 -0.226 0.129 0.059 PB L2
ENSG00000111275 ALDH2 966108 sc-eQTL 5.74e-01 -0.129 0.229 0.059 PB L2
ENSG00000111300 NAA25 624199 sc-eQTL 1.93e-01 -0.317 0.242 0.059 PB L2
ENSG00000111331 OAS3 -205449 sc-eQTL 1.59e-01 -0.277 0.195 0.059 PB L2
ENSG00000111335 OAS2 -245400 sc-eQTL 4.02e-01 0.147 0.175 0.059 PB L2
ENSG00000123064 DDX54 -452484 sc-eQTL 7.77e-01 -0.0669 0.236 0.059 PB L2
ENSG00000135144 DTX1 -323714 sc-eQTL 7.08e-01 0.0787 0.209 0.059 PB L2
ENSG00000135148 TRAFD1 607457 sc-eQTL 6.77e-01 0.104 0.25 0.059 PB L2
ENSG00000139405 RITA1 -452531 sc-eQTL 8.82e-01 0.0259 0.174 0.059 PB L2
ENSG00000151176 PLBD2 -625571 sc-eQTL 7.40e-01 0.0738 0.222 0.059 PB L2
ENSG00000173064 HECTD4 350556 sc-eQTL 2.80e-01 -0.196 0.18 0.059 PB L2
ENSG00000179295 PTPN11 314644 sc-eQTL 6.37e-01 -0.113 0.24 0.059 PB L2
ENSG00000186815 TPCN1 -488055 sc-eQTL 2.40e-01 0.269 0.228 0.059 PB L2
ENSG00000198270 TMEM116 719810 sc-eQTL 5.42e-01 0.152 0.249 0.059 PB L2
ENSG00000234608 MAPKAPK5-AS1 890093 sc-eQTL 6.52e-01 0.0935 0.207 0.059 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 890767 eQTL 0.0102 -0.0774 0.0301 0.0525 0.0105 0.0702
ENSG00000111275 ALDH2 966108 pQTL 0.0169 0.125 0.0522 0.0 0.0 0.0694
ENSG00000123064 DDX54 -452484 eQTL 0.0154 0.0527 0.0217 0.0 0.0 0.0702
ENSG00000135094 SDS -693306 eQTL 0.0267 0.132 0.0596 0.0 0.0 0.0702
ENSG00000139405 RITA1 -452531 eQTL 0.033 0.0835 0.0391 0.0 0.0 0.0702


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000135094 SDS -693306 3.21e-07 1.56e-07 6.57e-08 2.22e-07 1.07e-07 8.89e-08 2.24e-07 5.89e-08 1.85e-07 1.03e-07 1.76e-07 1.46e-07 2.38e-07 8.07e-08 5.97e-08 9.6e-08 4.63e-08 1.91e-07 7.29e-08 6.16e-08 1.26e-07 1.7e-07 1.68e-07 3.68e-08 2.17e-07 1.51e-07 1.29e-07 1.17e-07 1.39e-07 1.33e-07 1.26e-07 4.32e-08 3.65e-08 9.3e-08 4.04e-08 3.05e-08 4.28e-08 8.17e-08 6.35e-08 6.07e-08 4.92e-08 1.55e-07 3.99e-08 7.61e-09 3.48e-08 8.31e-09 7.61e-08 2.02e-09 4.83e-08
ENSG00000139405 RITA1 -452531 8.63e-07 5.33e-07 1.27e-07 3.62e-07 1.12e-07 2.09e-07 5.54e-07 1.56e-07 5.02e-07 2.57e-07 7.15e-07 4.03e-07 7.93e-07 1.34e-07 2.44e-07 2.83e-07 3.35e-07 4.2e-07 2.42e-07 1.69e-07 2.05e-07 3.95e-07 3.69e-07 1.76e-07 7.72e-07 2.7e-07 3.04e-07 2.71e-07 4.06e-07 5.99e-07 3.1e-07 6.42e-08 4.62e-08 1.56e-07 3.05e-07 1.18e-07 1.09e-07 8.04e-08 6.81e-08 2.74e-08 1.01e-07 4.95e-07 2.99e-08 1.83e-08 1.47e-07 1.29e-08 1.17e-07 1.2e-08 5.96e-08