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Genes within 1Mb (chr12:110890646:C:CAT):

View on , UCSC , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111231 GPN3 421378 eQTL 1.38e-30 0.285 0.024 0.0 0.0 0.222
ENSG00000111252 SH2B3 -515302 pQTL 4.59e-03 -0.0491 0.0173 0.0 0.0 0.217
ENSG00000111275 ALDH2 -876241 pQTL 4.56e-20 -0.281 0.0301 0.0 0.0 0.217
ENSG00000111275 ALDH2 -876241 eQTL 1.32e-07 -0.105 0.0197 0.0 0.0 0.222
ENSG00000139437 TCHP 990372 eQTL 9.52e-22 -0.18 0.0183 0.0 0.0 0.222
ENSG00000186298 PPP1CC 147707 pQTL 5.95e-02 -0.0308 0.0163 0.00124 0.0 0.217
ENSG00000204852 TCTN1 276619 eQTL 3.69e-02 -0.0371 0.0178 0.0 0.0 0.222
ENSG00000258359 PCNPP1 -779716 eQTL 3.48e-04 -0.145 0.0405 0.00109 0.00158 0.222
ENSG00000277595 AC007546.1 858401 eQTL 7.79e-04 0.0635 0.0188 0.00152 0.0 0.222

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina