Genes within 1Mb (chr12:110718142:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000076513 ANKRD13A 718956 eQTL 8.90e-11 -0.149 0.0228 0.0 0.0 0.054
ENSG00000111199 TRPV4 884741 eQTL 1.73e-04 -0.229 0.0608 0.0 0.0 0.054
ENSG00000111229 ARPC3 267805 eQTL 1.53e-15 -0.137 0.0169 0.00275 0.00542 0.054
ENSG00000111231 GPN3 248874 eQTL 1.63e-38 -0.598 0.044 0.0 0.0 0.054
ENSG00000111237 VPS29 216025 eQTL 4.69e-04 -0.0915 0.0261 0.0 0.0 0.054
ENSG00000139437 TCHP 817868 eQTL 7.82e-04 0.121 0.0358 0.0 0.0 0.054
ENSG00000174456 C12orf76 644508 eQTL 6.48e-04 -0.152 0.0443 0.0 0.0 0.054
ENSG00000186298 PPP1CC -24797 pQTL 8.61e-03 0.0783 0.0298 0.00241 0.0 0.0574
ENSG00000204856 FAM216A 249361 eQTL 1.34e-15 -0.36 0.0443 0.0 0.0 0.054
ENSG00000277299 AC084876.1 769753 eQTL 5.41e-03 -0.18 0.0645 0.00214 0.0 0.054
ENSG00000277595 AC007546.1 685897 eQTL 8.60e-02 -0.0609 0.0354 0.00126 0.0 0.054
ENSG00000280426 AC084876.2 719015 eQTL 9.86e-06 -0.187 0.0422 0.00437 0.00454 0.054


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000076513 ANKRD13A 718956 2.66e-07 1.11e-07 3.31e-08 1.78e-07 9.02e-08 9.32e-08 1.42e-07 5.49e-08 1.37e-07 4.24e-08 1.62e-07 8.03e-08 1.23e-07 6.21e-08 5.4e-08 7.89e-08 4.94e-08 1.1e-07 5.19e-08 4.03e-08 1.05e-07 1.3e-07 1.3e-07 4.26e-08 1.29e-07 1.15e-07 1.1e-07 8.71e-08 9.97e-08 1.1e-07 9.58e-08 3.92e-08 2.74e-08 8.68e-08 9.13e-08 3.87e-08 5.03e-08 9.26e-08 8e-08 4.19e-08 4.6e-08 1.37e-07 4.01e-08 3.36e-08 7.79e-08 1.7e-08 1.25e-07 4.2e-09 4.81e-08
ENSG00000111199 TRPV4 884741 2.6e-07 1.01e-07 3.44e-08 1.78e-07 9.91e-08 9.13e-08 1.39e-07 5.35e-08 1.36e-07 4.23e-08 1.63e-07 7.58e-08 1.21e-07 6.07e-08 5.14e-08 7.87e-08 5.1e-08 1.07e-07 5.2e-08 3.74e-08 1.03e-07 1.31e-07 1.29e-07 4.67e-08 1.32e-07 1.13e-07 1.13e-07 8.71e-08 1.03e-07 1.09e-07 9.75e-08 3.68e-08 2.74e-08 8.3e-08 9.41e-08 3.97e-08 4.89e-08 9.06e-08 8.42e-08 3.37e-08 4e-08 1.37e-07 4.12e-08 3.16e-08 8.16e-08 1.75e-08 1.34e-07 4.41e-09 4.79e-08
ENSG00000111229 ARPC3 267805 7.74e-07 8.16e-07 7.92e-08 4.14e-07 1.07e-07 2.12e-07 5.01e-07 1.37e-07 3.03e-07 2.16e-07 6.28e-07 4.21e-07 5.54e-07 1.6e-07 2.26e-07 2.14e-07 2.77e-07 3.3e-07 1.93e-07 1.53e-07 1.76e-07 3.65e-07 3.04e-07 1.76e-07 7.01e-07 2.55e-07 2.43e-07 2.98e-07 2.84e-07 4.27e-07 2.54e-07 5.77e-08 5.53e-08 1.77e-07 2.84e-07 7.86e-08 1.38e-07 5.8e-08 3.82e-08 1.16e-07 5.23e-08 5.79e-07 2.67e-08 1.93e-08 8.43e-08 1.22e-08 7.36e-08 3.2e-09 5.76e-08
ENSG00000111231 GPN3 248874 8.7e-07 8.72e-07 8.83e-08 3.54e-07 9.29e-08 2.86e-07 5.76e-07 1.65e-07 4.18e-07 2.62e-07 8.58e-07 5.22e-07 7.19e-07 1.84e-07 3.15e-07 2.89e-07 3.93e-07 3.82e-07 2.6e-07 1.9e-07 1.92e-07 4.38e-07 3.77e-07 2.49e-07 9.71e-07 2.57e-07 2.72e-07 3.89e-07 3.86e-07 5.99e-07 3.43e-07 4.1e-08 5.48e-08 2.1e-07 3.3e-07 1.28e-07 2.34e-07 6.89e-08 6.72e-08 2.65e-07 7.48e-08 7.36e-07 4.3e-08 1.05e-08 1.08e-07 1.46e-08 1.07e-07 1.2e-08 5.86e-08
ENSG00000139433 \N 837601 2.66e-07 1.01e-07 3.39e-08 1.78e-07 9.65e-08 9.36e-08 1.39e-07 5.35e-08 1.36e-07 4.23e-08 1.63e-07 7.58e-08 1.21e-07 6.07e-08 5.14e-08 7.87e-08 4.94e-08 1.07e-07 5.2e-08 3.89e-08 1.06e-07 1.31e-07 1.29e-07 4.53e-08 1.32e-07 1.13e-07 1.13e-07 8.71e-08 1.03e-07 1.09e-07 9.75e-08 4.07e-08 2.74e-08 8.25e-08 9.27e-08 3.93e-08 4.84e-08 8.91e-08 8.3e-08 3.98e-08 4.18e-08 1.36e-07 4.01e-08 2.76e-08 8.03e-08 1.74e-08 1.3e-07 4.33e-09 4.73e-08
ENSG00000139437 TCHP 817868 2.66e-07 1.01e-07 3.39e-08 1.79e-07 9.65e-08 9.36e-08 1.39e-07 5.35e-08 1.36e-07 4.23e-08 1.63e-07 7.58e-08 1.21e-07 6.07e-08 5.44e-08 8.01e-08 4.94e-08 1.07e-07 5.2e-08 3.89e-08 1.06e-07 1.33e-07 1.29e-07 4.53e-08 1.32e-07 1.13e-07 1.13e-07 8.7e-08 1.03e-07 1.1e-07 9.75e-08 4.03e-08 2.74e-08 8.25e-08 9.27e-08 3.93e-08 5.03e-08 8.91e-08 8.19e-08 4.02e-08 4.45e-08 1.36e-07 4.01e-08 2.57e-08 8.03e-08 1.74e-08 1.26e-07 4.33e-09 4.73e-08
ENSG00000204856 FAM216A 249361 8.48e-07 8.9e-07 8.83e-08 3.43e-07 9.45e-08 2.86e-07 5.76e-07 1.65e-07 4.18e-07 2.62e-07 8.58e-07 5.15e-07 7.19e-07 1.76e-07 3.15e-07 2.89e-07 3.93e-07 3.73e-07 2.6e-07 1.9e-07 1.92e-07 4.31e-07 3.69e-07 2.39e-07 9.26e-07 2.57e-07 2.72e-07 3.9e-07 3.86e-07 5.82e-07 3.43e-07 4.06e-08 5.48e-08 2.22e-07 3.3e-07 1.21e-07 2.14e-07 6.89e-08 6.72e-08 2.65e-07 7.48e-08 7.2e-07 4.24e-08 1.05e-08 1.1e-07 1.44e-08 1.01e-07 1.18e-08 5.86e-08
ENSG00000277299 AC084876.1 769753 2.66e-07 1.1e-07 3.35e-08 1.78e-07 9.65e-08 9.36e-08 1.39e-07 5.49e-08 1.36e-07 4.24e-08 1.63e-07 8.02e-08 1.23e-07 6.21e-08 5.44e-08 8.01e-08 4.94e-08 1.07e-07 5.19e-08 3.88e-08 1.06e-07 1.33e-07 1.29e-07 4.54e-08 1.29e-07 1.15e-07 1.13e-07 8.7e-08 9.97e-08 1.1e-07 9.75e-08 3.98e-08 2.74e-08 8.21e-08 9.14e-08 3.9e-08 5.01e-08 9.2e-08 8.3e-08 3.76e-08 4.19e-08 1.36e-07 3.91e-08 2.09e-08 7.91e-08 1.72e-08 1.27e-07 4.26e-09 5.09e-08
ENSG00000277595 AC007546.1 685897 2.66e-07 1.16e-07 3.31e-08 1.82e-07 9.02e-08 9.3e-08 1.42e-07 5.33e-08 1.37e-07 4.24e-08 1.62e-07 8.03e-08 1.23e-07 6.21e-08 5.55e-08 7.89e-08 4.63e-08 1.1e-07 5.19e-08 4.03e-08 1.05e-07 1.3e-07 1.3e-07 4.13e-08 1.31e-07 1.19e-07 1.1e-07 9.15e-08 9.88e-08 1.11e-07 9.58e-08 3.89e-08 2.91e-08 8.82e-08 9.24e-08 4.02e-08 5.11e-08 9.35e-08 7.92e-08 4.19e-08 4.69e-08 1.35e-07 3.93e-08 2.97e-08 7.26e-08 1.69e-08 1.26e-07 4.14e-09 4.79e-08
ENSG00000280426 AC084876.2 719015 2.66e-07 1.11e-07 3.31e-08 1.78e-07 9.02e-08 9.32e-08 1.42e-07 5.49e-08 1.37e-07 4.24e-08 1.63e-07 8.03e-08 1.23e-07 6.21e-08 5.4e-08 7.89e-08 4.94e-08 1.1e-07 5.19e-08 4.03e-08 1.05e-07 1.3e-07 1.3e-07 4.26e-08 1.29e-07 1.15e-07 1.1e-07 8.71e-08 9.97e-08 1.1e-07 9.58e-08 3.92e-08 2.74e-08 8.68e-08 9.13e-08 3.87e-08 5.03e-08 9.26e-08 8e-08 4.19e-08 4.6e-08 1.37e-07 4.01e-08 3.36e-08 7.79e-08 1.7e-08 1.25e-07 4.2e-09 4.81e-08