Genes within 1Mb (chr12:109860004:T:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000076248 UNG 762430 pQTL 3.17e-02 -0.0561 0.0261 0.0 0.0 0.295
ENSG00000076513 ANKRD13A -139182 eQTL 6.46e-03 -0.0304 0.0111 0.0 0.0 0.293
ENSG00000110906 KCTD10 382645 eQTL 3.99e-02 0.0385 0.0187 0.0 0.0 0.293
ENSG00000111199 TRPV4 26603 eQTL 1.20e-26 -0.305 0.0277 0.0 0.00283 0.293
ENSG00000111229 ARPC3 -590333 eQTL 4.86e-04 -0.0292 0.00835 0.0 0.0 0.293
ENSG00000111231 GPN3 -609264 eQTL 8.64e-24 -0.226 0.0219 0.0 0.0 0.293
ENSG00000111237 VPS29 -642113 eQTL 1.84e-02 -0.0296 0.0125 0.0 0.0 0.293
ENSG00000139428 MMAB 286424 eQTL 2.72e-02 0.047 0.0212 0.0 0.0 0.293
ENSG00000139433 GLTP -20537 eQTL 1.10e-05 -0.0737 0.0167 0.0 0.0 0.293
ENSG00000139437 TCHP -40270 eQTL 6.14e-05 0.0689 0.0171 0.0 0.0 0.293
ENSG00000204852 TCTN1 -754023 eQTL 1.29e-03 0.0514 0.0159 0.0 0.0 0.293
ENSG00000204856 FAM216A -608777 eQTL 2.28e-06 -0.103 0.0217 0.0 0.0 0.293
ENSG00000277299 AC084876.1 -88385 eQTL 1.41e-02 -0.0762 0.031 0.00144 0.0 0.293


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000076248 UNG 762430 2.67e-07 1.16e-07 5.03e-08 1.82e-07 9.01e-08 9.71e-08 1.49e-07 5.33e-08 1.44e-07 4.4e-08 1.56e-07 7.88e-08 1.41e-07 6.38e-08 5.97e-08 7.37e-08 3.88e-08 1.21e-07 5.39e-08 4.42e-08 1.08e-07 1.28e-07 1.44e-07 4.16e-08 1.63e-07 1.19e-07 1.11e-07 9.15e-08 1.09e-07 1.12e-07 9.7e-08 3.84e-08 2.91e-08 8.68e-08 8.76e-08 3.2e-08 5.11e-08 9.35e-08 7.92e-08 3.64e-08 2.99e-08 1.33e-07 5.22e-08 1.88e-08 8.03e-08 1.83e-08 1.25e-07 3.99e-09 4.88e-08
ENSG00000111199 TRPV4 26603 2.26e-05 2.99e-05 4.32e-06 1.38e-05 3.44e-06 1.02e-05 3.43e-05 3.76e-06 2.29e-05 1.17e-05 3.05e-05 1.08e-05 4.12e-05 1.06e-05 5.8e-06 1.32e-05 1.2e-05 1.78e-05 6.6e-06 4.92e-06 9.81e-06 2.36e-05 2.55e-05 6.81e-06 3.51e-05 5.39e-06 9.85e-06 8.99e-06 2.61e-05 1.95e-05 1.59e-05 1.38e-06 1.79e-06 5.09e-06 9.11e-06 4.56e-06 2.08e-06 2.82e-06 3.35e-06 2.6e-06 1.12e-06 3.29e-05 2.64e-06 2.62e-07 1.85e-06 3.07e-06 3.39e-06 1.35e-06 1.37e-06
ENSG00000111231 GPN3 -609264 2.91e-07 1.36e-07 6.57e-08 2.22e-07 1.01e-07 9.91e-08 1.99e-07 5.4e-08 1.5e-07 5.67e-08 1.57e-07 8.55e-08 1.87e-07 7.64e-08 1.45e-07 7.97e-08 4.09e-08 1.56e-07 7.18e-08 4.92e-08 1.22e-07 1.47e-07 1.69e-07 2.79e-08 2.48e-07 1.21e-07 1.13e-07 9.74e-08 1.32e-07 1e-07 1.14e-07 3.96e-08 3.35e-08 8.89e-08 3.02e-08 3.24e-08 4.49e-08 9.68e-08 6.54e-08 3.09e-08 4.45e-08 1.6e-07 3.99e-08 1.45e-08 5.75e-08 1.19e-08 1.22e-07 1.88e-09 4.83e-08
ENSG00000135093 \N 836915 2.64e-07 1.1e-07 4.48e-08 1.82e-07 8.92e-08 9.3e-08 1.42e-07 5.35e-08 1.4e-07 4.38e-08 1.6e-07 8.03e-08 1.33e-07 6.21e-08 5.94e-08 7.26e-08 4.63e-08 1.14e-07 5.21e-08 4.03e-08 1.05e-07 1.23e-07 1.34e-07 4.26e-08 1.4e-07 1.15e-07 1.12e-07 8.71e-08 1.05e-07 1.12e-07 9.91e-08 3.76e-08 2.74e-08 8.65e-08 8.82e-08 3.95e-08 5.01e-08 9.2e-08 8.19e-08 3.69e-08 3.35e-08 1.33e-07 4.52e-08 2.85e-08 8.79e-08 1.66e-08 1.3e-07 4.14e-09 4.81e-08
ENSG00000139428 MMAB 286424 1.28e-06 1e-06 2.71e-07 1.27e-06 3.37e-07 4.53e-07 1.52e-06 3.45e-07 1.52e-06 4.15e-07 1.41e-06 5.7e-07 2.01e-06 2.88e-07 6.23e-07 9.17e-07 7.91e-07 6.56e-07 8.83e-07 6.88e-07 7.49e-07 1.7e-06 1.25e-06 6.31e-07 2.36e-06 3.28e-07 7.66e-07 5.65e-07 1.61e-06 1.27e-06 7.26e-07 5.82e-08 1.34e-07 5.18e-07 5.39e-07 5.35e-07 5.12e-07 1.12e-07 1.34e-07 6.07e-08 4.49e-08 2.09e-06 1.08e-07 2.02e-08 2e-07 2.33e-07 1.58e-07 8.93e-08 2.02e-07
ENSG00000139437 TCHP -40270 1.57e-05 2.54e-05 3.26e-06 1.24e-05 2.91e-06 7.76e-06 2.7e-05 3.29e-06 1.87e-05 9.53e-06 2.42e-05 8.37e-06 3.56e-05 8.55e-06 5.23e-06 1.07e-05 9.64e-06 1.43e-05 5.37e-06 4.19e-06 8.43e-06 1.87e-05 2.11e-05 5.44e-06 3.04e-05 5.22e-06 8e-06 7.76e-06 2.1e-05 1.58e-05 1.29e-05 1.05e-06 1.47e-06 4.03e-06 8.46e-06 4.37e-06 1.84e-06 2.6e-06 2.8e-06 1.97e-06 9.41e-07 2.81e-05 2.39e-06 2.36e-07 1.17e-06 2.74e-06 2.84e-06 1.16e-06 1.11e-06
ENSG00000204856 FAM216A -608777 2.91e-07 1.36e-07 6.57e-08 2.22e-07 1.01e-07 9.91e-08 1.99e-07 5.4e-08 1.5e-07 5.67e-08 1.57e-07 8.55e-08 1.87e-07 7.64e-08 1.45e-07 7.97e-08 4.09e-08 1.56e-07 7.18e-08 4.92e-08 1.22e-07 1.47e-07 1.69e-07 2.79e-08 2.48e-07 1.21e-07 1.13e-07 9.74e-08 1.32e-07 1e-07 1.21e-07 3.96e-08 3.35e-08 8.89e-08 3.02e-08 3.24e-08 4.49e-08 9.68e-08 6.54e-08 3.09e-08 4.45e-08 1.6e-07 3.99e-08 1.45e-08 5.75e-08 1.19e-08 1.22e-07 1.88e-09 4.83e-08
ENSG00000256262 \N 806052 2.64e-07 1.11e-07 4.91e-08 1.82e-07 8.92e-08 9.57e-08 1.44e-07 5.49e-08 1.4e-07 4.38e-08 1.59e-07 8.03e-08 1.41e-07 6.21e-08 5.43e-08 7.26e-08 4.48e-08 1.18e-07 5.36e-08 4.21e-08 1.05e-07 1.27e-07 1.39e-07 4.13e-08 1.5e-07 1.19e-07 1.12e-07 8.71e-08 1.08e-07 1.12e-07 9.64e-08 3.95e-08 2.74e-08 8.65e-08 8.96e-08 3.62e-08 5.02e-08 9.26e-08 8e-08 3.69e-08 3.25e-08 1.35e-07 4.89e-08 2.49e-08 8.16e-08 1.83e-08 1.26e-07 4.09e-09 4.79e-08
ENSG00000277299 AC084876.1 -88385 8.64e-06 1.18e-05 1.98e-06 6.5e-06 2.17e-06 3.79e-06 1.12e-05 1.49e-06 9.55e-06 4.92e-06 1.13e-05 4.92e-06 1.56e-05 3.72e-06 3.41e-06 6.44e-06 4.13e-06 5e-06 2.66e-06 2.76e-06 4.64e-06 9.61e-06 9.64e-06 3.21e-06 1.58e-05 2.82e-06 4.87e-06 2.99e-06 1.1e-05 7.92e-06 5.15e-06 5.11e-07 6.76e-07 2.78e-06 5.03e-06 2.63e-06 1.73e-06 1.08e-06 1.41e-06 7.22e-07 4.57e-07 1.48e-05 1.28e-06 1.51e-07 7.62e-07 1.78e-06 1.02e-06 7.02e-07 4.71e-07