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Genes within 1Mb (chr12:109714801:G:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000076248 UNG 617227 sc-eQTL 9.33e-02 0.411 0.243 0.944 PB L2
ENSG00000076513 ANKRD13A -284385 sc-eQTL 7.58e-01 -0.064 0.207 0.944 PB L2
ENSG00000076555 ACACB 598206 sc-eQTL 7.46e-01 -0.0742 0.228 0.944 PB L2
ENSG00000084112 SSH1 857211 sc-eQTL 5.70e-01 0.144 0.253 0.944 PB L2
ENSG00000110880 CORO1C 983205 sc-eQTL 1.44e-01 -0.363 0.247 0.944 PB L2
ENSG00000110906 KCTD10 237442 sc-eQTL 3.76e-01 0.236 0.265 0.944 PB L2
ENSG00000110921 MVK 141546 sc-eQTL 4.59e-01 -0.185 0.249 0.944 PB L2
ENSG00000111229 ARPC3 -735621 sc-eQTL 3.72e-01 -0.131 0.146 0.944 PB L2
ENSG00000111231 GPN3 -754467 sc-eQTL 4.36e-01 -0.167 0.214 0.944 PB L2
ENSG00000111237 VPS29 -787310 sc-eQTL 9.79e-02 0.302 0.181 0.944 PB L2
ENSG00000122970 IFT81 -409534 sc-eQTL 1.66e-01 0.274 0.196 0.944 PB L2
ENSG00000122986 HVCN1 -990149 sc-eQTL 4.62e-01 -0.107 0.145 0.944 PB L2
ENSG00000135093 USP30 691712 sc-eQTL 7.32e-01 0.0847 0.247 0.944 PB L2
ENSG00000139428 MMAB 141221 sc-eQTL 8.04e-02 0.418 0.237 0.944 PB L2
ENSG00000139433 GLTP -165740 sc-eQTL 9.69e-01 0.0103 0.263 0.944 PB L2
ENSG00000139436 GIT2 -281588 sc-eQTL 7.38e-01 -0.0898 0.268 0.944 PB L2
ENSG00000139437 TCHP -185463 sc-eQTL 7.98e-01 0.063 0.246 0.944 PB L2
ENSG00000151148 UBE3B 237399 sc-eQTL 9.66e-01 -0.0108 0.253 0.944 PB L2
ENSG00000174437 ATP2A2 -565955 sc-eQTL 9.87e-01 -0.00274 0.164 0.944 PB L2
ENSG00000174456 C12orf76 -358833 sc-eQTL 7.94e-01 -0.0639 0.244 0.944 PB L2
ENSG00000189046 ALKBH2 621170 sc-eQTL 6.37e-01 0.122 0.259 0.944 PB L2
ENSG00000196510 ANAPC7 -688929 sc-eQTL 5.42e-01 -0.145 0.236 0.944 PB L2
ENSG00000196850 PPTC7 -868517 sc-eQTL 2.67e-01 0.266 0.239 0.944 PB L2
ENSG00000204852 TCTN1 -899226 sc-eQTL 4.80e-01 -0.143 0.203 0.944 PB L2
ENSG00000204856 FAM216A -753614 sc-eQTL 7.24e-01 -0.0902 0.255 0.944 PB L2
ENSG00000256262 USP30-AS1 660849 sc-eQTL 1.32e-01 0.362 0.239 0.944 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000076513 ANKRD13A -284385 eQTL 0.0337 0.0498 0.0234 0.0 0.0 0.05
ENSG00000111199 TRPV4 -118600 eQTL 0.000782 0.207 0.0613 0.0 0.0 0.05
ENSG00000111237 VPS29 -787316 eQTL 0.0235 0.0597 0.0263 0.0 0.0 0.05
ENSG00000204856 FAM216A -753980 eQTL 7.34e-03 0.124 0.046 0.0 0.0 0.05

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000110880 \N 983205 3.14e-07 2.17e-07 6.42e-08 3.05e-07 9.25e-08 8.21e-08 2.16e-07 5.48e-08 1.44e-07 5.67e-08 1.83e-07 1.19e-07 2.05e-07 8.55e-08 6.27e-08 7.89e-08 4.45e-08 1.77e-07 6.92e-08 4.92e-08 1.21e-07 1.31e-07 1.58e-07 3.49e-08 1.98e-07 1.14e-07 1.23e-07 1.26e-07 1.22e-07 1.1e-07 1.09e-07 4.22e-08 3.61e-08 1.01e-07 1.22e-07 4.68e-08 5.65e-08 9.23e-08 5.95e-08 4.19e-08 4.63e-08 1.46e-07 5.2e-08 1.32e-08 6.38e-08 1.92e-08 1.22e-07 4.33e-09 4.85e-08
ENSG00000111199 TRPV4 -118600 9.25e-06 1.24e-05 2.57e-06 9.25e-06 2.36e-06 5.23e-06 1.31e-05 2.48e-06 1.07e-05 6.02e-06 1.5e-05 6.53e-06 1.76e-05 3.97e-06 3.96e-06 6.92e-06 5.34e-06 9.51e-06 3.09e-06 3.09e-06 6.18e-06 1.09e-05 1.03e-05 4.21e-06 1.75e-05 4.4e-06 6.2e-06 5.22e-06 1.24e-05 9.37e-06 7.67e-06 1.01e-06 1.12e-06 3.76e-06 5.44e-06 3.41e-06 1.82e-06 2e-06 2.25e-06 1.41e-06 9.48e-07 1.3e-05 1.49e-06 1.95e-07 8.47e-07 2.27e-06 1.79e-06 6.58e-07 6.07e-07
ENSG00000139428 \N 141221 7.78e-06 9.82e-06 1.93e-06 8.31e-06 2.25e-06 4.24e-06 1.07e-05 2.08e-06 9.63e-06 5.35e-06 1.24e-05 5.57e-06 1.34e-05 3.72e-06 3.46e-06 6.36e-06 4.08e-06 7.55e-06 2.64e-06 2.82e-06 5.19e-06 9.49e-06 7.98e-06 3.69e-06 1.3e-05 3.49e-06 4.75e-06 4.64e-06 9.36e-06 7.95e-06 5.93e-06 9.92e-07 1.31e-06 3.59e-06 4.78e-06 2.82e-06 1.71e-06 1.9e-06 2.13e-06 1.11e-06 1.01e-06 1.13e-05 1.43e-06 1.47e-07 7.71e-07 1.85e-06 1.46e-06 7.15e-07 5.01e-07