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Genes within 1Mb (chr12:109530384:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075856 SART3 968984 sc-eQTL 1.48e-01 -0.33 0.227 0.051 pDC L2
ENSG00000076248 UNG 432810 sc-eQTL 6.92e-01 0.0845 0.213 0.051 pDC L2
ENSG00000076513 ANKRD13A -468802 sc-eQTL 9.79e-01 -0.0065 0.243 0.051 pDC L2
ENSG00000076555 ACACB 413789 sc-eQTL 3.03e-01 0.225 0.218 0.051 pDC L2
ENSG00000084112 SSH1 672794 sc-eQTL 1.40e-01 -0.339 0.229 0.051 pDC L2
ENSG00000110876 SELPLG 896425 sc-eQTL 2.06e-03 0.463 0.148 0.051 pDC L2
ENSG00000110880 CORO1C 798788 sc-eQTL 7.18e-01 -0.0605 0.167 0.051 pDC L2
ENSG00000110906 KCTD10 53025 sc-eQTL 3.33e-01 -0.249 0.256 0.051 pDC L2
ENSG00000110921 MVK -42871 sc-eQTL 8.81e-01 0.0323 0.215 0.051 pDC L2
ENSG00000111229 ARPC3 -920038 sc-eQTL 1.52e-02 -0.33 0.134 0.051 pDC L2
ENSG00000111231 GPN3 -938884 sc-eQTL 4.04e-01 0.193 0.231 0.051 pDC L2
ENSG00000111237 VPS29 -971727 sc-eQTL 4.21e-02 0.415 0.203 0.051 pDC L2
ENSG00000122970 IFT81 -593951 sc-eQTL 1.59e-01 0.296 0.209 0.051 pDC L2
ENSG00000135093 USP30 507295 sc-eQTL 6.20e-01 0.112 0.225 0.051 pDC L2
ENSG00000136003 ISCU 967802 sc-eQTL 4.45e-01 -0.146 0.19 0.051 pDC L2
ENSG00000139428 MMAB -43196 sc-eQTL 6.61e-01 0.0992 0.226 0.051 pDC L2
ENSG00000139433 GLTP -350157 sc-eQTL 7.02e-01 0.0815 0.212 0.051 pDC L2
ENSG00000139436 GIT2 -466005 sc-eQTL 6.39e-01 -0.0937 0.199 0.051 pDC L2
ENSG00000139437 TCHP -369880 sc-eQTL 9.80e-01 -0.00524 0.212 0.051 pDC L2
ENSG00000151148 UBE3B 52982 sc-eQTL 8.89e-01 -0.0342 0.244 0.051 pDC L2
ENSG00000174437 ATP2A2 -750372 sc-eQTL 7.46e-01 -0.0742 0.229 0.051 pDC L2
ENSG00000174456 C12orf76 -543250 sc-eQTL 4.34e-01 -0.198 0.253 0.051 pDC L2
ENSG00000189046 ALKBH2 436753 sc-eQTL 9.88e-02 0.361 0.217 0.051 pDC L2
ENSG00000196510 ANAPC7 -873346 sc-eQTL 1.88e-01 -0.297 0.224 0.051 pDC L2
ENSG00000204856 FAM216A -938031 sc-eQTL 7.70e-01 0.0597 0.204 0.051 pDC L2
ENSG00000256262 USP30-AS1 476432 sc-eQTL 6.84e-01 0.0826 0.202 0.051 pDC L2
ENSG00000257221 AC007569.1 901716 sc-eQTL 9.48e-01 -0.0138 0.213 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000110906 KCTD10 53025 eQTL 0.000825 0.156 0.0466 0.0 0.0 0.0334
ENSG00000183160 TMEM119 932064 eQTL 0.0162 -0.104 0.0431 0.0 0.0 0.0334
ENSG00000274598 AC087893.1 696000 eQTL 0.0417 -0.142 0.0698 0.00131 0.0 0.0334

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000110906 KCTD10 53025 5.72e-06 9.31e-06 6.82e-07 3.81e-06 1.66e-06 1.52e-06 8.7e-06 1.15e-06 4.81e-06 3.06e-06 8.9e-06 3.41e-06 1.06e-05 2.82e-06 1.03e-06 3.81e-06 3.01e-06 3.72e-06 1.58e-06 1.48e-06 2.69e-06 6.55e-06 5.31e-06 1.93e-06 9.69e-06 2.11e-06 2.68e-06 1.73e-06 6.07e-06 7.11e-06 3.67e-06 4.2e-07 6.68e-07 2.16e-06 2.42e-06 1.33e-06 1.07e-06 5.61e-07 9.49e-07 5.9e-07 5.21e-07 8.1e-06 5.26e-07 1.62e-07 5.79e-07 1.08e-06 1.08e-06 6.9e-07 3.75e-07
ENSG00000110921 \N -42871 6.92e-06 9.43e-06 9.7e-07 4.3e-06 1.73e-06 2.7e-06 9.75e-06 1.26e-06 6.39e-06 4.12e-06 1.05e-05 4.77e-06 1.15e-05 3.8e-06 1.7e-06 4.87e-06 3.68e-06 3.99e-06 2.18e-06 2e-06 3.16e-06 7.64e-06 6.71e-06 2.18e-06 1.22e-05 2.58e-06 3.63e-06 2.43e-06 7.11e-06 7.86e-06 4.51e-06 5.23e-07 8.41e-07 2.54e-06 3.19e-06 2.04e-06 1.23e-06 1.25e-06 1.35e-06 7.35e-07 7.52e-07 9.93e-06 7.84e-07 1.68e-07 8.03e-07 9.38e-07 9.77e-07 6.8e-07 5.44e-07
ENSG00000204856 \N -938397 2.61e-07 1.11e-07 3.59e-08 1.8e-07 8.92e-08 9.57e-08 1.38e-07 5.33e-08 1.41e-07 4.38e-08 1.6e-07 7.78e-08 1.3e-07 6.21e-08 5.53e-08 7.89e-08 4.48e-08 1.14e-07 5.21e-08 4.42e-08 1.05e-07 1.28e-07 1.26e-07 4.16e-08 1.31e-07 1.19e-07 1.12e-07 9.15e-08 1.02e-07 1.12e-07 9.58e-08 3.65e-08 3.16e-08 8.55e-08 8.74e-08 3.93e-08 5.31e-08 9.3e-08 6.55e-08 3.76e-08 5.24e-08 1.35e-07 3.99e-08 1.55e-08 5.87e-08 1.66e-08 1.22e-07 1.88e-09 4.79e-08