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Genes within 1Mb (chr12:109307233:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075856 SART3 745833 sc-eQTL 9.31e-01 0.0213 0.244 0.051 B_Activated L2
ENSG00000076248 UNG 209659 sc-eQTL 6.67e-02 0.392 0.212 0.051 B_Activated L2
ENSG00000076513 ANKRD13A -691953 sc-eQTL 9.40e-01 -0.0157 0.208 0.051 B_Activated L2
ENSG00000076555 ACACB 190638 sc-eQTL 9.65e-01 0.00834 0.192 0.051 B_Activated L2
ENSG00000084112 SSH1 449643 sc-eQTL 8.28e-01 -0.0478 0.22 0.051 B_Activated L2
ENSG00000110876 SELPLG 673274 sc-eQTL 4.45e-01 0.156 0.203 0.051 B_Activated L2
ENSG00000110880 CORO1C 575637 sc-eQTL 1.23e-01 -0.369 0.239 0.051 B_Activated L2
ENSG00000110906 KCTD10 -170126 sc-eQTL 3.66e-03 -0.651 0.221 0.051 B_Activated L2
ENSG00000110921 MVK -266022 sc-eQTL 7.06e-01 0.0806 0.213 0.051 B_Activated L2
ENSG00000122970 IFT81 -817102 sc-eQTL 3.50e-01 0.162 0.173 0.051 B_Activated L2
ENSG00000135093 USP30 284144 sc-eQTL 7.53e-01 0.0665 0.211 0.051 B_Activated L2
ENSG00000136003 ISCU 744651 sc-eQTL 6.11e-01 0.113 0.223 0.051 B_Activated L2
ENSG00000139428 MMAB -266347 sc-eQTL 9.66e-01 0.00941 0.222 0.051 B_Activated L2
ENSG00000139433 GLTP -573308 sc-eQTL 8.06e-01 0.0621 0.252 0.051 B_Activated L2
ENSG00000139436 GIT2 -689156 sc-eQTL 9.03e-01 0.0284 0.233 0.051 B_Activated L2
ENSG00000139437 TCHP -593031 sc-eQTL 8.95e-01 0.0294 0.223 0.051 B_Activated L2
ENSG00000151148 UBE3B -170169 sc-eQTL 9.14e-01 0.0256 0.238 0.051 B_Activated L2
ENSG00000174437 ATP2A2 -973523 sc-eQTL 5.84e-01 0.122 0.223 0.051 B_Activated L2
ENSG00000174456 C12orf76 -766401 sc-eQTL 6.30e-01 -0.118 0.244 0.051 B_Activated L2
ENSG00000189046 ALKBH2 213602 sc-eQTL 1.59e-01 -0.319 0.226 0.051 B_Activated L2
ENSG00000198855 FICD 791956 sc-eQTL 7.24e-01 -0.0716 0.202 0.051 B_Activated L2
ENSG00000256262 USP30-AS1 253281 sc-eQTL 2.39e-01 -0.252 0.213 0.051 B_Activated L2
ENSG00000257221 AC007569.1 678565 sc-eQTL 4.72e-01 -0.176 0.244 0.051 B_Activated L2
ENSG00000075856 SART3 745833 sc-eQTL 3.84e-01 0.179 0.205 0.054 cDC L2
ENSG00000076248 UNG 209659 sc-eQTL 5.68e-01 0.102 0.178 0.054 cDC L2
ENSG00000076513 ANKRD13A -691953 sc-eQTL 1.27e-01 0.291 0.189 0.054 cDC L2
ENSG00000076555 ACACB 190638 sc-eQTL 3.21e-01 -0.187 0.187 0.054 cDC L2
ENSG00000084112 SSH1 449643 sc-eQTL 3.84e-01 0.185 0.212 0.054 cDC L2
ENSG00000110876 SELPLG 673274 sc-eQTL 6.95e-01 -0.0621 0.158 0.054 cDC L2
ENSG00000110880 CORO1C 575637 sc-eQTL 1.04e-01 -0.306 0.187 0.054 cDC L2
ENSG00000110906 KCTD10 -170126 sc-eQTL 6.85e-01 -0.0901 0.222 0.054 cDC L2
ENSG00000110921 MVK -266022 sc-eQTL 9.25e-01 -0.0194 0.205 0.054 cDC L2
ENSG00000122970 IFT81 -817102 sc-eQTL 1.15e-01 0.278 0.175 0.054 cDC L2
ENSG00000135093 USP30 284144 sc-eQTL 1.80e-01 0.27 0.201 0.054 cDC L2
ENSG00000136003 ISCU 744651 sc-eQTL 7.98e-01 0.0546 0.213 0.054 cDC L2
ENSG00000139428 MMAB -266347 sc-eQTL 6.74e-01 -0.0884 0.21 0.054 cDC L2
ENSG00000139433 GLTP -573308 sc-eQTL 3.58e-01 -0.177 0.193 0.054 cDC L2
ENSG00000139436 GIT2 -689156 sc-eQTL 7.26e-01 0.0609 0.174 0.054 cDC L2
ENSG00000139437 TCHP -593031 sc-eQTL 3.91e-01 -0.186 0.216 0.054 cDC L2
ENSG00000151148 UBE3B -170169 sc-eQTL 6.16e-01 0.104 0.208 0.054 cDC L2
ENSG00000174437 ATP2A2 -973523 sc-eQTL 1.61e-02 -0.433 0.178 0.054 cDC L2
ENSG00000174456 C12orf76 -766401 sc-eQTL 7.73e-01 -0.0627 0.216 0.054 cDC L2
ENSG00000174600 CMKLR1 967916 sc-eQTL 8.58e-01 -0.0295 0.165 0.054 cDC L2
ENSG00000189046 ALKBH2 213602 sc-eQTL 9.13e-01 0.0232 0.211 0.054 cDC L2
ENSG00000198855 FICD 791956 sc-eQTL 5.56e-01 -0.104 0.177 0.054 cDC L2
ENSG00000256262 USP30-AS1 253281 sc-eQTL 2.13e-03 0.53 0.17 0.054 cDC L2
ENSG00000257221 AC007569.1 678565 sc-eQTL 7.80e-01 -0.041 0.146 0.054 cDC L2
ENSG00000075856 SART3 745833 sc-eQTL 7.13e-01 -0.0827 0.224 0.051 pDC L2
ENSG00000076248 UNG 209659 sc-eQTL 2.31e-02 -0.472 0.206 0.051 pDC L2
ENSG00000076513 ANKRD13A -691953 sc-eQTL 1.35e-01 -0.356 0.237 0.051 pDC L2
ENSG00000076555 ACACB 190638 sc-eQTL 4.74e-01 0.154 0.215 0.051 pDC L2
ENSG00000084112 SSH1 449643 sc-eQTL 9.69e-01 0.00873 0.226 0.051 pDC L2
ENSG00000110876 SELPLG 673274 sc-eQTL 8.53e-01 0.0277 0.15 0.051 pDC L2
ENSG00000110880 CORO1C 575637 sc-eQTL 1.21e-01 0.254 0.163 0.051 pDC L2
ENSG00000110906 KCTD10 -170126 sc-eQTL 9.02e-01 -0.0313 0.253 0.051 pDC L2
ENSG00000110921 MVK -266022 sc-eQTL 2.75e-01 0.231 0.211 0.051 pDC L2
ENSG00000122970 IFT81 -817102 sc-eQTL 5.36e-01 -0.128 0.207 0.051 pDC L2
ENSG00000135093 USP30 284144 sc-eQTL 2.92e-01 0.233 0.221 0.051 pDC L2
ENSG00000136003 ISCU 744651 sc-eQTL 8.10e-01 0.0453 0.188 0.051 pDC L2
ENSG00000139428 MMAB -266347 sc-eQTL 7.84e-01 0.0609 0.222 0.051 pDC L2
ENSG00000139433 GLTP -573308 sc-eQTL 3.68e-01 0.188 0.208 0.051 pDC L2
ENSG00000139436 GIT2 -689156 sc-eQTL 7.82e-01 -0.0544 0.196 0.051 pDC L2
ENSG00000139437 TCHP -593031 sc-eQTL 5.67e-01 0.119 0.208 0.051 pDC L2
ENSG00000151148 UBE3B -170169 sc-eQTL 2.58e-01 -0.271 0.239 0.051 pDC L2
ENSG00000174437 ATP2A2 -973523 sc-eQTL 8.80e-01 0.0341 0.225 0.051 pDC L2
ENSG00000174456 C12orf76 -766401 sc-eQTL 7.49e-01 -0.0798 0.249 0.051 pDC L2
ENSG00000174600 CMKLR1 967916 sc-eQTL 7.48e-01 0.0494 0.153 0.051 pDC L2
ENSG00000189046 ALKBH2 213602 sc-eQTL 6.79e-01 -0.0892 0.215 0.051 pDC L2
ENSG00000198855 FICD 791956 sc-eQTL 6.45e-01 -0.0993 0.215 0.051 pDC L2
ENSG00000256262 USP30-AS1 253281 sc-eQTL 3.65e-01 -0.181 0.199 0.051 pDC L2
ENSG00000257221 AC007569.1 678565 sc-eQTL 7.84e-01 -0.0575 0.21 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000277595 AC007546.1 -725012 eQTL 1.91e-05 -0.16 0.0373 0.0 0.0 0.0447

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000277595 AC007546.1 -725012 2.61e-07 1.19e-07 6.41e-08 1.82e-07 9.02e-08 9.57e-08 1.38e-07 5.21e-08 1.41e-07 4.24e-08 1.59e-07 8.02e-08 1.3e-07 6.56e-08 5.55e-08 8.01e-08 3.94e-08 1.1e-07 5.21e-08 3.88e-08 1.05e-07 1.3e-07 1.26e-07 5.01e-08 1.33e-07 1.15e-07 1.1e-07 8.71e-08 9.88e-08 1.1e-07 9.58e-08 3.41e-08 2.74e-08 8.82e-08 8.76e-08 4.02e-08 4.75e-08 9.06e-08 7.92e-08 3.59e-08 3.25e-08 1.37e-07 4.04e-08 1.2e-08 1.09e-07 1.74e-08 1.44e-07 4.6e-09 4.74e-08