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Genes within 1Mb (chr12:109297839:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075856 SART3 736439 sc-eQTL 9.31e-01 0.0213 0.244 0.051 B_Activated L2
ENSG00000076248 UNG 200265 sc-eQTL 6.67e-02 0.392 0.212 0.051 B_Activated L2
ENSG00000076513 ANKRD13A -701347 sc-eQTL 9.40e-01 -0.0157 0.208 0.051 B_Activated L2
ENSG00000076555 ACACB 181244 sc-eQTL 9.65e-01 0.00834 0.192 0.051 B_Activated L2
ENSG00000084112 SSH1 440249 sc-eQTL 8.28e-01 -0.0478 0.22 0.051 B_Activated L2
ENSG00000110876 SELPLG 663880 sc-eQTL 4.45e-01 0.156 0.203 0.051 B_Activated L2
ENSG00000110880 CORO1C 566243 sc-eQTL 1.23e-01 -0.369 0.239 0.051 B_Activated L2
ENSG00000110906 KCTD10 -179520 sc-eQTL 3.66e-03 -0.651 0.221 0.051 B_Activated L2
ENSG00000110921 MVK -275416 sc-eQTL 7.06e-01 0.0806 0.213 0.051 B_Activated L2
ENSG00000122970 IFT81 -826496 sc-eQTL 3.50e-01 0.162 0.173 0.051 B_Activated L2
ENSG00000135093 USP30 274750 sc-eQTL 7.53e-01 0.0665 0.211 0.051 B_Activated L2
ENSG00000136003 ISCU 735257 sc-eQTL 6.11e-01 0.113 0.223 0.051 B_Activated L2
ENSG00000139428 MMAB -275741 sc-eQTL 9.66e-01 0.00941 0.222 0.051 B_Activated L2
ENSG00000139433 GLTP -582702 sc-eQTL 8.06e-01 0.0621 0.252 0.051 B_Activated L2
ENSG00000139436 GIT2 -698550 sc-eQTL 9.03e-01 0.0284 0.233 0.051 B_Activated L2
ENSG00000139437 TCHP -602425 sc-eQTL 8.95e-01 0.0294 0.223 0.051 B_Activated L2
ENSG00000151148 UBE3B -179563 sc-eQTL 9.14e-01 0.0256 0.238 0.051 B_Activated L2
ENSG00000174437 ATP2A2 -982917 sc-eQTL 5.84e-01 0.122 0.223 0.051 B_Activated L2
ENSG00000174456 C12orf76 -775795 sc-eQTL 6.30e-01 -0.118 0.244 0.051 B_Activated L2
ENSG00000189046 ALKBH2 204208 sc-eQTL 1.59e-01 -0.319 0.226 0.051 B_Activated L2
ENSG00000198855 FICD 782562 sc-eQTL 7.24e-01 -0.0716 0.202 0.051 B_Activated L2
ENSG00000256262 USP30-AS1 243887 sc-eQTL 2.39e-01 -0.252 0.213 0.051 B_Activated L2
ENSG00000257221 AC007569.1 669171 sc-eQTL 4.72e-01 -0.176 0.244 0.051 B_Activated L2
ENSG00000075856 SART3 736439 sc-eQTL 3.84e-01 0.179 0.205 0.054 cDC L2
ENSG00000076248 UNG 200265 sc-eQTL 5.68e-01 0.102 0.178 0.054 cDC L2
ENSG00000076513 ANKRD13A -701347 sc-eQTL 1.27e-01 0.291 0.189 0.054 cDC L2
ENSG00000076555 ACACB 181244 sc-eQTL 3.21e-01 -0.187 0.187 0.054 cDC L2
ENSG00000084112 SSH1 440249 sc-eQTL 3.84e-01 0.185 0.212 0.054 cDC L2
ENSG00000110876 SELPLG 663880 sc-eQTL 6.95e-01 -0.0621 0.158 0.054 cDC L2
ENSG00000110880 CORO1C 566243 sc-eQTL 1.04e-01 -0.306 0.187 0.054 cDC L2
ENSG00000110906 KCTD10 -179520 sc-eQTL 6.85e-01 -0.0901 0.222 0.054 cDC L2
ENSG00000110921 MVK -275416 sc-eQTL 9.25e-01 -0.0194 0.205 0.054 cDC L2
ENSG00000122970 IFT81 -826496 sc-eQTL 1.15e-01 0.278 0.175 0.054 cDC L2
ENSG00000135093 USP30 274750 sc-eQTL 1.80e-01 0.27 0.201 0.054 cDC L2
ENSG00000136003 ISCU 735257 sc-eQTL 7.98e-01 0.0546 0.213 0.054 cDC L2
ENSG00000139428 MMAB -275741 sc-eQTL 6.74e-01 -0.0884 0.21 0.054 cDC L2
ENSG00000139433 GLTP -582702 sc-eQTL 3.58e-01 -0.177 0.193 0.054 cDC L2
ENSG00000139436 GIT2 -698550 sc-eQTL 7.26e-01 0.0609 0.174 0.054 cDC L2
ENSG00000139437 TCHP -602425 sc-eQTL 3.91e-01 -0.186 0.216 0.054 cDC L2
ENSG00000151148 UBE3B -179563 sc-eQTL 6.16e-01 0.104 0.208 0.054 cDC L2
ENSG00000174437 ATP2A2 -982917 sc-eQTL 1.61e-02 -0.433 0.178 0.054 cDC L2
ENSG00000174456 C12orf76 -775795 sc-eQTL 7.73e-01 -0.0627 0.216 0.054 cDC L2
ENSG00000174600 CMKLR1 958522 sc-eQTL 8.58e-01 -0.0295 0.165 0.054 cDC L2
ENSG00000189046 ALKBH2 204208 sc-eQTL 9.13e-01 0.0232 0.211 0.054 cDC L2
ENSG00000198855 FICD 782562 sc-eQTL 5.56e-01 -0.104 0.177 0.054 cDC L2
ENSG00000256262 USP30-AS1 243887 sc-eQTL 2.13e-03 0.53 0.17 0.054 cDC L2
ENSG00000257221 AC007569.1 669171 sc-eQTL 7.80e-01 -0.041 0.146 0.054 cDC L2
ENSG00000075856 SART3 736439 sc-eQTL 7.13e-01 -0.0827 0.224 0.051 pDC L2
ENSG00000076248 UNG 200265 sc-eQTL 2.31e-02 -0.472 0.206 0.051 pDC L2
ENSG00000076513 ANKRD13A -701347 sc-eQTL 1.35e-01 -0.356 0.237 0.051 pDC L2
ENSG00000076555 ACACB 181244 sc-eQTL 4.74e-01 0.154 0.215 0.051 pDC L2
ENSG00000084112 SSH1 440249 sc-eQTL 9.69e-01 0.00873 0.226 0.051 pDC L2
ENSG00000110876 SELPLG 663880 sc-eQTL 8.53e-01 0.0277 0.15 0.051 pDC L2
ENSG00000110880 CORO1C 566243 sc-eQTL 1.21e-01 0.254 0.163 0.051 pDC L2
ENSG00000110906 KCTD10 -179520 sc-eQTL 9.02e-01 -0.0313 0.253 0.051 pDC L2
ENSG00000110921 MVK -275416 sc-eQTL 2.75e-01 0.231 0.211 0.051 pDC L2
ENSG00000122970 IFT81 -826496 sc-eQTL 5.36e-01 -0.128 0.207 0.051 pDC L2
ENSG00000135093 USP30 274750 sc-eQTL 2.92e-01 0.233 0.221 0.051 pDC L2
ENSG00000136003 ISCU 735257 sc-eQTL 8.10e-01 0.0453 0.188 0.051 pDC L2
ENSG00000139428 MMAB -275741 sc-eQTL 7.84e-01 0.0609 0.222 0.051 pDC L2
ENSG00000139433 GLTP -582702 sc-eQTL 3.68e-01 0.188 0.208 0.051 pDC L2
ENSG00000139436 GIT2 -698550 sc-eQTL 7.82e-01 -0.0544 0.196 0.051 pDC L2
ENSG00000139437 TCHP -602425 sc-eQTL 5.67e-01 0.119 0.208 0.051 pDC L2
ENSG00000151148 UBE3B -179563 sc-eQTL 2.58e-01 -0.271 0.239 0.051 pDC L2
ENSG00000174437 ATP2A2 -982917 sc-eQTL 8.80e-01 0.0341 0.225 0.051 pDC L2
ENSG00000174456 C12orf76 -775795 sc-eQTL 7.49e-01 -0.0798 0.249 0.051 pDC L2
ENSG00000174600 CMKLR1 958522 sc-eQTL 7.48e-01 0.0494 0.153 0.051 pDC L2
ENSG00000189046 ALKBH2 204208 sc-eQTL 6.79e-01 -0.0892 0.215 0.051 pDC L2
ENSG00000198855 FICD 782562 sc-eQTL 6.45e-01 -0.0993 0.215 0.051 pDC L2
ENSG00000256262 USP30-AS1 243887 sc-eQTL 3.65e-01 -0.181 0.199 0.051 pDC L2
ENSG00000257221 AC007569.1 669171 sc-eQTL 7.84e-01 -0.0575 0.21 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000277595 AC007546.1 -734406 eQTL 2.32e-05 -0.159 0.0373 0.0 0.0 0.0447

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000277595 AC007546.1 -734406 3.77e-07 2.88e-07 9.16e-08 2.53e-07 1.05e-07 1.25e-07 3.7e-07 7.52e-08 2.26e-07 1.28e-07 3.21e-07 1.91e-07 4.11e-07 8.85e-08 1.07e-07 1.14e-07 1.18e-07 2.9e-07 1.13e-07 8.69e-08 1.59e-07 2.3e-07 2.11e-07 4.81e-08 3.55e-07 1.9e-07 1.72e-07 1.54e-07 1.76e-07 2.97e-07 1.76e-07 8.37e-08 4.93e-08 1.02e-07 7.55e-08 6.85e-08 6.67e-08 6.2e-08 4.78e-08 8.2e-08 6.21e-08 2.43e-07 1.7e-08 1.54e-08 7.93e-08 8.42e-09 9.26e-08 3.25e-09 5.69e-08