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Genes within 1Mb (chr12:109290967:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075856 SART3 729567 sc-eQTL 9.31e-01 0.0213 0.244 0.051 B_Activated L2
ENSG00000076248 UNG 193393 sc-eQTL 6.67e-02 0.392 0.212 0.051 B_Activated L2
ENSG00000076513 ANKRD13A -708219 sc-eQTL 9.40e-01 -0.0157 0.208 0.051 B_Activated L2
ENSG00000076555 ACACB 174372 sc-eQTL 9.65e-01 0.00834 0.192 0.051 B_Activated L2
ENSG00000084112 SSH1 433377 sc-eQTL 8.28e-01 -0.0478 0.22 0.051 B_Activated L2
ENSG00000110876 SELPLG 657008 sc-eQTL 4.45e-01 0.156 0.203 0.051 B_Activated L2
ENSG00000110880 CORO1C 559371 sc-eQTL 1.23e-01 -0.369 0.239 0.051 B_Activated L2
ENSG00000110906 KCTD10 -186392 sc-eQTL 3.66e-03 -0.651 0.221 0.051 B_Activated L2
ENSG00000110921 MVK -282288 sc-eQTL 7.06e-01 0.0806 0.213 0.051 B_Activated L2
ENSG00000122970 IFT81 -833368 sc-eQTL 3.50e-01 0.162 0.173 0.051 B_Activated L2
ENSG00000135093 USP30 267878 sc-eQTL 7.53e-01 0.0665 0.211 0.051 B_Activated L2
ENSG00000136003 ISCU 728385 sc-eQTL 6.11e-01 0.113 0.223 0.051 B_Activated L2
ENSG00000139428 MMAB -282613 sc-eQTL 9.66e-01 0.00941 0.222 0.051 B_Activated L2
ENSG00000139433 GLTP -589574 sc-eQTL 8.06e-01 0.0621 0.252 0.051 B_Activated L2
ENSG00000139436 GIT2 -705422 sc-eQTL 9.03e-01 0.0284 0.233 0.051 B_Activated L2
ENSG00000139437 TCHP -609297 sc-eQTL 8.95e-01 0.0294 0.223 0.051 B_Activated L2
ENSG00000151148 UBE3B -186435 sc-eQTL 9.14e-01 0.0256 0.238 0.051 B_Activated L2
ENSG00000174437 ATP2A2 -989789 sc-eQTL 5.84e-01 0.122 0.223 0.051 B_Activated L2
ENSG00000174456 C12orf76 -782667 sc-eQTL 6.30e-01 -0.118 0.244 0.051 B_Activated L2
ENSG00000189046 ALKBH2 197336 sc-eQTL 1.59e-01 -0.319 0.226 0.051 B_Activated L2
ENSG00000198855 FICD 775690 sc-eQTL 7.24e-01 -0.0716 0.202 0.051 B_Activated L2
ENSG00000256262 USP30-AS1 237015 sc-eQTL 2.39e-01 -0.252 0.213 0.051 B_Activated L2
ENSG00000257221 AC007569.1 662299 sc-eQTL 4.72e-01 -0.176 0.244 0.051 B_Activated L2
ENSG00000075856 SART3 729567 sc-eQTL 3.84e-01 0.179 0.205 0.054 cDC L2
ENSG00000076248 UNG 193393 sc-eQTL 5.68e-01 0.102 0.178 0.054 cDC L2
ENSG00000076513 ANKRD13A -708219 sc-eQTL 1.27e-01 0.291 0.189 0.054 cDC L2
ENSG00000076555 ACACB 174372 sc-eQTL 3.21e-01 -0.187 0.187 0.054 cDC L2
ENSG00000084112 SSH1 433377 sc-eQTL 3.84e-01 0.185 0.212 0.054 cDC L2
ENSG00000110876 SELPLG 657008 sc-eQTL 6.95e-01 -0.0621 0.158 0.054 cDC L2
ENSG00000110880 CORO1C 559371 sc-eQTL 1.04e-01 -0.306 0.187 0.054 cDC L2
ENSG00000110906 KCTD10 -186392 sc-eQTL 6.85e-01 -0.0901 0.222 0.054 cDC L2
ENSG00000110921 MVK -282288 sc-eQTL 9.25e-01 -0.0194 0.205 0.054 cDC L2
ENSG00000122970 IFT81 -833368 sc-eQTL 1.15e-01 0.278 0.175 0.054 cDC L2
ENSG00000135093 USP30 267878 sc-eQTL 1.80e-01 0.27 0.201 0.054 cDC L2
ENSG00000136003 ISCU 728385 sc-eQTL 7.98e-01 0.0546 0.213 0.054 cDC L2
ENSG00000139428 MMAB -282613 sc-eQTL 6.74e-01 -0.0884 0.21 0.054 cDC L2
ENSG00000139433 GLTP -589574 sc-eQTL 3.58e-01 -0.177 0.193 0.054 cDC L2
ENSG00000139436 GIT2 -705422 sc-eQTL 7.26e-01 0.0609 0.174 0.054 cDC L2
ENSG00000139437 TCHP -609297 sc-eQTL 3.91e-01 -0.186 0.216 0.054 cDC L2
ENSG00000151148 UBE3B -186435 sc-eQTL 6.16e-01 0.104 0.208 0.054 cDC L2
ENSG00000174437 ATP2A2 -989789 sc-eQTL 1.61e-02 -0.433 0.178 0.054 cDC L2
ENSG00000174456 C12orf76 -782667 sc-eQTL 7.73e-01 -0.0627 0.216 0.054 cDC L2
ENSG00000174600 CMKLR1 951650 sc-eQTL 8.58e-01 -0.0295 0.165 0.054 cDC L2
ENSG00000189046 ALKBH2 197336 sc-eQTL 9.13e-01 0.0232 0.211 0.054 cDC L2
ENSG00000198855 FICD 775690 sc-eQTL 5.56e-01 -0.104 0.177 0.054 cDC L2
ENSG00000256262 USP30-AS1 237015 sc-eQTL 2.13e-03 0.53 0.17 0.054 cDC L2
ENSG00000257221 AC007569.1 662299 sc-eQTL 7.80e-01 -0.041 0.146 0.054 cDC L2
ENSG00000075856 SART3 729567 sc-eQTL 7.13e-01 -0.0827 0.224 0.051 pDC L2
ENSG00000076248 UNG 193393 sc-eQTL 2.31e-02 -0.472 0.206 0.051 pDC L2
ENSG00000076513 ANKRD13A -708219 sc-eQTL 1.35e-01 -0.356 0.237 0.051 pDC L2
ENSG00000076555 ACACB 174372 sc-eQTL 4.74e-01 0.154 0.215 0.051 pDC L2
ENSG00000084112 SSH1 433377 sc-eQTL 9.69e-01 0.00873 0.226 0.051 pDC L2
ENSG00000110876 SELPLG 657008 sc-eQTL 8.53e-01 0.0277 0.15 0.051 pDC L2
ENSG00000110880 CORO1C 559371 sc-eQTL 1.21e-01 0.254 0.163 0.051 pDC L2
ENSG00000110906 KCTD10 -186392 sc-eQTL 9.02e-01 -0.0313 0.253 0.051 pDC L2
ENSG00000110921 MVK -282288 sc-eQTL 2.75e-01 0.231 0.211 0.051 pDC L2
ENSG00000122970 IFT81 -833368 sc-eQTL 5.36e-01 -0.128 0.207 0.051 pDC L2
ENSG00000135093 USP30 267878 sc-eQTL 2.92e-01 0.233 0.221 0.051 pDC L2
ENSG00000136003 ISCU 728385 sc-eQTL 8.10e-01 0.0453 0.188 0.051 pDC L2
ENSG00000139428 MMAB -282613 sc-eQTL 7.84e-01 0.0609 0.222 0.051 pDC L2
ENSG00000139433 GLTP -589574 sc-eQTL 3.68e-01 0.188 0.208 0.051 pDC L2
ENSG00000139436 GIT2 -705422 sc-eQTL 7.82e-01 -0.0544 0.196 0.051 pDC L2
ENSG00000139437 TCHP -609297 sc-eQTL 5.67e-01 0.119 0.208 0.051 pDC L2
ENSG00000151148 UBE3B -186435 sc-eQTL 2.58e-01 -0.271 0.239 0.051 pDC L2
ENSG00000174437 ATP2A2 -989789 sc-eQTL 8.80e-01 0.0341 0.225 0.051 pDC L2
ENSG00000174456 C12orf76 -782667 sc-eQTL 7.49e-01 -0.0798 0.249 0.051 pDC L2
ENSG00000174600 CMKLR1 951650 sc-eQTL 7.48e-01 0.0494 0.153 0.051 pDC L2
ENSG00000189046 ALKBH2 197336 sc-eQTL 6.79e-01 -0.0892 0.215 0.051 pDC L2
ENSG00000198855 FICD 775690 sc-eQTL 6.45e-01 -0.0993 0.215 0.051 pDC L2
ENSG00000256262 USP30-AS1 237015 sc-eQTL 3.65e-01 -0.181 0.199 0.051 pDC L2
ENSG00000257221 AC007569.1 662299 sc-eQTL 7.84e-01 -0.0575 0.21 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000277595 AC007546.1 -741278 eQTL 3.34e-05 -0.155 0.0372 0.0 0.0 0.0451

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000277595 AC007546.1 -741278 2.69e-07 1.34e-07 3.69e-08 2.24e-07 8.83e-08 1e-07 1.6e-07 5.4e-08 1.44e-07 4.74e-08 1.55e-07 9.19e-08 1.47e-07 7.37e-08 6.12e-08 7.17e-08 3.87e-08 1.27e-07 5.82e-08 4.16e-08 1.08e-07 1.27e-07 1.44e-07 3.23e-08 1.55e-07 1.21e-07 1.07e-07 9.61e-08 1.16e-07 1.07e-07 9.7e-08 3.92e-08 3.66e-08 8.23e-08 3.02e-08 3.6e-08 5.3e-08 8.63e-08 6.37e-08 3.92e-08 5.13e-08 1.35e-07 5.2e-08 2.02e-08 4.25e-08 1.89e-08 1.21e-07 1.89e-09 4.79e-08