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Genes within 1Mb (chr12:109283766:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075856 SART3 722366 sc-eQTL 9.31e-01 0.0213 0.244 0.051 B_Activated L2
ENSG00000076248 UNG 186192 sc-eQTL 6.67e-02 0.392 0.212 0.051 B_Activated L2
ENSG00000076513 ANKRD13A -715420 sc-eQTL 9.40e-01 -0.0157 0.208 0.051 B_Activated L2
ENSG00000076555 ACACB 167171 sc-eQTL 9.65e-01 0.00834 0.192 0.051 B_Activated L2
ENSG00000084112 SSH1 426176 sc-eQTL 8.28e-01 -0.0478 0.22 0.051 B_Activated L2
ENSG00000110876 SELPLG 649807 sc-eQTL 4.45e-01 0.156 0.203 0.051 B_Activated L2
ENSG00000110880 CORO1C 552170 sc-eQTL 1.23e-01 -0.369 0.239 0.051 B_Activated L2
ENSG00000110906 KCTD10 -193593 sc-eQTL 3.66e-03 -0.651 0.221 0.051 B_Activated L2
ENSG00000110921 MVK -289489 sc-eQTL 7.06e-01 0.0806 0.213 0.051 B_Activated L2
ENSG00000122970 IFT81 -840569 sc-eQTL 3.50e-01 0.162 0.173 0.051 B_Activated L2
ENSG00000135093 USP30 260677 sc-eQTL 7.53e-01 0.0665 0.211 0.051 B_Activated L2
ENSG00000136003 ISCU 721184 sc-eQTL 6.11e-01 0.113 0.223 0.051 B_Activated L2
ENSG00000139428 MMAB -289814 sc-eQTL 9.66e-01 0.00941 0.222 0.051 B_Activated L2
ENSG00000139433 GLTP -596775 sc-eQTL 8.06e-01 0.0621 0.252 0.051 B_Activated L2
ENSG00000139436 GIT2 -712623 sc-eQTL 9.03e-01 0.0284 0.233 0.051 B_Activated L2
ENSG00000139437 TCHP -616498 sc-eQTL 8.95e-01 0.0294 0.223 0.051 B_Activated L2
ENSG00000151148 UBE3B -193636 sc-eQTL 9.14e-01 0.0256 0.238 0.051 B_Activated L2
ENSG00000174437 ATP2A2 -996990 sc-eQTL 5.84e-01 0.122 0.223 0.051 B_Activated L2
ENSG00000174456 C12orf76 -789868 sc-eQTL 6.30e-01 -0.118 0.244 0.051 B_Activated L2
ENSG00000189046 ALKBH2 190135 sc-eQTL 1.59e-01 -0.319 0.226 0.051 B_Activated L2
ENSG00000198855 FICD 768489 sc-eQTL 7.24e-01 -0.0716 0.202 0.051 B_Activated L2
ENSG00000256262 USP30-AS1 229814 sc-eQTL 2.39e-01 -0.252 0.213 0.051 B_Activated L2
ENSG00000257221 AC007569.1 655098 sc-eQTL 4.72e-01 -0.176 0.244 0.051 B_Activated L2
ENSG00000075856 SART3 722366 sc-eQTL 3.84e-01 0.179 0.205 0.054 cDC L2
ENSG00000076248 UNG 186192 sc-eQTL 5.68e-01 0.102 0.178 0.054 cDC L2
ENSG00000076513 ANKRD13A -715420 sc-eQTL 1.27e-01 0.291 0.189 0.054 cDC L2
ENSG00000076555 ACACB 167171 sc-eQTL 3.21e-01 -0.187 0.187 0.054 cDC L2
ENSG00000084112 SSH1 426176 sc-eQTL 3.84e-01 0.185 0.212 0.054 cDC L2
ENSG00000110876 SELPLG 649807 sc-eQTL 6.95e-01 -0.0621 0.158 0.054 cDC L2
ENSG00000110880 CORO1C 552170 sc-eQTL 1.04e-01 -0.306 0.187 0.054 cDC L2
ENSG00000110906 KCTD10 -193593 sc-eQTL 6.85e-01 -0.0901 0.222 0.054 cDC L2
ENSG00000110921 MVK -289489 sc-eQTL 9.25e-01 -0.0194 0.205 0.054 cDC L2
ENSG00000122970 IFT81 -840569 sc-eQTL 1.15e-01 0.278 0.175 0.054 cDC L2
ENSG00000135093 USP30 260677 sc-eQTL 1.80e-01 0.27 0.201 0.054 cDC L2
ENSG00000136003 ISCU 721184 sc-eQTL 7.98e-01 0.0546 0.213 0.054 cDC L2
ENSG00000139428 MMAB -289814 sc-eQTL 6.74e-01 -0.0884 0.21 0.054 cDC L2
ENSG00000139433 GLTP -596775 sc-eQTL 3.58e-01 -0.177 0.193 0.054 cDC L2
ENSG00000139436 GIT2 -712623 sc-eQTL 7.26e-01 0.0609 0.174 0.054 cDC L2
ENSG00000139437 TCHP -616498 sc-eQTL 3.91e-01 -0.186 0.216 0.054 cDC L2
ENSG00000151148 UBE3B -193636 sc-eQTL 6.16e-01 0.104 0.208 0.054 cDC L2
ENSG00000174437 ATP2A2 -996990 sc-eQTL 1.61e-02 -0.433 0.178 0.054 cDC L2
ENSG00000174456 C12orf76 -789868 sc-eQTL 7.73e-01 -0.0627 0.216 0.054 cDC L2
ENSG00000174600 CMKLR1 944449 sc-eQTL 8.58e-01 -0.0295 0.165 0.054 cDC L2
ENSG00000189046 ALKBH2 190135 sc-eQTL 9.13e-01 0.0232 0.211 0.054 cDC L2
ENSG00000198855 FICD 768489 sc-eQTL 5.56e-01 -0.104 0.177 0.054 cDC L2
ENSG00000256262 USP30-AS1 229814 sc-eQTL 2.13e-03 0.53 0.17 0.054 cDC L2
ENSG00000257221 AC007569.1 655098 sc-eQTL 7.80e-01 -0.041 0.146 0.054 cDC L2
ENSG00000075856 SART3 722366 sc-eQTL 7.13e-01 -0.0827 0.224 0.051 pDC L2
ENSG00000076248 UNG 186192 sc-eQTL 2.31e-02 -0.472 0.206 0.051 pDC L2
ENSG00000076513 ANKRD13A -715420 sc-eQTL 1.35e-01 -0.356 0.237 0.051 pDC L2
ENSG00000076555 ACACB 167171 sc-eQTL 4.74e-01 0.154 0.215 0.051 pDC L2
ENSG00000084112 SSH1 426176 sc-eQTL 9.69e-01 0.00873 0.226 0.051 pDC L2
ENSG00000110876 SELPLG 649807 sc-eQTL 8.53e-01 0.0277 0.15 0.051 pDC L2
ENSG00000110880 CORO1C 552170 sc-eQTL 1.21e-01 0.254 0.163 0.051 pDC L2
ENSG00000110906 KCTD10 -193593 sc-eQTL 9.02e-01 -0.0313 0.253 0.051 pDC L2
ENSG00000110921 MVK -289489 sc-eQTL 2.75e-01 0.231 0.211 0.051 pDC L2
ENSG00000122970 IFT81 -840569 sc-eQTL 5.36e-01 -0.128 0.207 0.051 pDC L2
ENSG00000135093 USP30 260677 sc-eQTL 2.92e-01 0.233 0.221 0.051 pDC L2
ENSG00000136003 ISCU 721184 sc-eQTL 8.10e-01 0.0453 0.188 0.051 pDC L2
ENSG00000139428 MMAB -289814 sc-eQTL 7.84e-01 0.0609 0.222 0.051 pDC L2
ENSG00000139433 GLTP -596775 sc-eQTL 3.68e-01 0.188 0.208 0.051 pDC L2
ENSG00000139436 GIT2 -712623 sc-eQTL 7.82e-01 -0.0544 0.196 0.051 pDC L2
ENSG00000139437 TCHP -616498 sc-eQTL 5.67e-01 0.119 0.208 0.051 pDC L2
ENSG00000151148 UBE3B -193636 sc-eQTL 2.58e-01 -0.271 0.239 0.051 pDC L2
ENSG00000174437 ATP2A2 -996990 sc-eQTL 8.80e-01 0.0341 0.225 0.051 pDC L2
ENSG00000174456 C12orf76 -789868 sc-eQTL 7.49e-01 -0.0798 0.249 0.051 pDC L2
ENSG00000174600 CMKLR1 944449 sc-eQTL 7.48e-01 0.0494 0.153 0.051 pDC L2
ENSG00000189046 ALKBH2 190135 sc-eQTL 6.79e-01 -0.0892 0.215 0.051 pDC L2
ENSG00000198855 FICD 768489 sc-eQTL 6.45e-01 -0.0993 0.215 0.051 pDC L2
ENSG00000256262 USP30-AS1 229814 sc-eQTL 3.65e-01 -0.181 0.199 0.051 pDC L2
ENSG00000257221 AC007569.1 655098 sc-eQTL 7.84e-01 -0.0575 0.21 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000277595 AC007546.1 -748479 eQTL 9.52e-05 -0.148 0.0376 0.0 0.0 0.0447

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000277595 AC007546.1 -748479 3.1e-07 1.59e-07 7.92e-08 2.35e-07 1.05e-07 1.19e-07 2.74e-07 8.17e-08 1.96e-07 1.21e-07 2.04e-07 1.72e-07 2.38e-07 8.54e-08 7.79e-08 1.06e-07 6.63e-08 2.04e-07 8.93e-08 6.58e-08 1.33e-07 2.09e-07 1.81e-07 3.41e-08 2.37e-07 1.82e-07 1.57e-07 1.28e-07 1.37e-07 1.58e-07 1.26e-07 4.58e-08 4.97e-08 1.02e-07 6.78e-08 5.05e-08 6.48e-08 5.71e-08 4.9e-08 6.07e-08 4.9e-08 1.59e-07 1.21e-08 7.56e-09 4e-08 8.42e-09 9.1e-08 2.85e-09 4.74e-08