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Genes within 1Mb (chr12:108909282:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075856 SART3 347882 sc-eQTL 5.26e-01 -0.174 0.274 0.052 PB L2
ENSG00000076248 UNG -188292 sc-eQTL 6.81e-01 -0.102 0.247 0.052 PB L2
ENSG00000076555 ACACB -207313 sc-eQTL 3.90e-01 -0.198 0.229 0.052 PB L2
ENSG00000084112 SSH1 51692 sc-eQTL 9.57e-01 0.014 0.255 0.052 PB L2
ENSG00000110876 SELPLG 275323 sc-eQTL 4.92e-01 -0.115 0.167 0.052 PB L2
ENSG00000110880 CORO1C 177686 sc-eQTL 3.08e-01 0.255 0.25 0.052 PB L2
ENSG00000110906 KCTD10 -568077 sc-eQTL 6.16e-01 0.135 0.268 0.052 PB L2
ENSG00000110921 MVK -663973 sc-eQTL 1.66e-02 0.596 0.245 0.052 PB L2
ENSG00000135093 USP30 -113807 sc-eQTL 5.28e-01 0.157 0.248 0.052 PB L2
ENSG00000136003 ISCU 346700 sc-eQTL 1.25e-01 0.289 0.187 0.052 PB L2
ENSG00000139428 MMAB -664298 sc-eQTL 6.57e-02 -0.443 0.238 0.052 PB L2
ENSG00000139433 GLTP -971259 sc-eQTL 1.26e-01 -0.403 0.262 0.052 PB L2
ENSG00000139437 TCHP -990982 sc-eQTL 6.51e-01 -0.112 0.247 0.052 PB L2
ENSG00000151148 UBE3B -568120 sc-eQTL 1.15e-01 0.401 0.252 0.052 PB L2
ENSG00000189046 ALKBH2 -184349 sc-eQTL 3.34e-01 -0.252 0.26 0.052 PB L2
ENSG00000198855 FICD 394005 sc-eQTL 1.79e-01 -0.251 0.186 0.052 PB L2
ENSG00000256262 USP30-AS1 -144670 sc-eQTL 6.77e-01 0.101 0.243 0.052 PB L2
ENSG00000257221 AC007569.1 280614 sc-eQTL 8.48e-01 -0.0437 0.227 0.052 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139433 GLTP -971259 eQTL 0.0103 0.0903 0.0351 0.00192 0.0 0.0491
ENSG00000257221 AC007569.1 280595 eQTL 0.00625 0.187 0.0681 0.0 0.0 0.0491

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000183160 \N 310962 1.29e-06 9.01e-07 3.05e-07 3.65e-07 2.48e-07 4.35e-07 9.87e-07 3.31e-07 1.13e-06 3.76e-07 1.25e-06 6.06e-07 1.53e-06 2.57e-07 4.32e-07 6.7e-07 7.7e-07 5.48e-07 5.07e-07 6.97e-07 3.8e-07 9.92e-07 7.63e-07 5.98e-07 1.69e-06 2.89e-07 6.19e-07 5.65e-07 8.97e-07 1.09e-06 5.37e-07 1.58e-07 1.94e-07 4.83e-07 3.93e-07 4.74e-07 3.65e-07 1.26e-07 2.17e-07 8.88e-08 2.85e-07 1.22e-06 5.45e-08 5.83e-09 1.88e-07 8.76e-08 1.87e-07 8.73e-08 9.42e-08