logo

Genes within 1Mb (chr12:108906129:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075856 SART3 344729 sc-eQTL 3.93e-03 -0.632 0.216 0.051 B_Activated L2
ENSG00000076248 UNG -191445 sc-eQTL 7.94e-01 0.0509 0.195 0.051 B_Activated L2
ENSG00000076555 ACACB -210466 sc-eQTL 2.45e-01 -0.203 0.174 0.051 B_Activated L2
ENSG00000084112 SSH1 48539 sc-eQTL 1.30e-01 -0.301 0.198 0.051 B_Activated L2
ENSG00000110876 SELPLG 272170 sc-eQTL 9.16e-01 0.0196 0.185 0.051 B_Activated L2
ENSG00000110880 CORO1C 174533 sc-eQTL 6.22e-01 -0.108 0.218 0.051 B_Activated L2
ENSG00000110906 KCTD10 -571230 sc-eQTL 3.56e-01 -0.19 0.205 0.051 B_Activated L2
ENSG00000110921 MVK -667126 sc-eQTL 8.41e-01 0.039 0.194 0.051 B_Activated L2
ENSG00000135093 USP30 -116960 sc-eQTL 8.63e-01 -0.0331 0.192 0.051 B_Activated L2
ENSG00000136003 ISCU 343547 sc-eQTL 2.94e-01 0.213 0.202 0.051 B_Activated L2
ENSG00000139428 MMAB -667451 sc-eQTL 6.28e-01 -0.0977 0.202 0.051 B_Activated L2
ENSG00000139433 GLTP -974412 sc-eQTL 9.37e-01 -0.018 0.229 0.051 B_Activated L2
ENSG00000139437 TCHP -994135 sc-eQTL 6.15e-01 0.102 0.202 0.051 B_Activated L2
ENSG00000151148 UBE3B -571273 sc-eQTL 2.19e-01 -0.266 0.215 0.051 B_Activated L2
ENSG00000189046 ALKBH2 -187502 sc-eQTL 1.95e-01 -0.267 0.205 0.051 B_Activated L2
ENSG00000198855 FICD 390852 sc-eQTL 7.64e-01 -0.0551 0.184 0.051 B_Activated L2
ENSG00000256262 USP30-AS1 -147823 sc-eQTL 2.22e-02 0.441 0.191 0.051 B_Activated L2
ENSG00000257221 AC007569.1 277461 sc-eQTL 6.27e-01 -0.108 0.222 0.051 B_Activated L2
ENSG00000075856 SART3 344729 sc-eQTL 5.26e-01 -0.174 0.274 0.052 PB L2
ENSG00000076248 UNG -191445 sc-eQTL 6.81e-01 -0.102 0.247 0.052 PB L2
ENSG00000076555 ACACB -210466 sc-eQTL 3.90e-01 -0.198 0.229 0.052 PB L2
ENSG00000084112 SSH1 48539 sc-eQTL 9.57e-01 0.014 0.255 0.052 PB L2
ENSG00000110876 SELPLG 272170 sc-eQTL 4.92e-01 -0.115 0.167 0.052 PB L2
ENSG00000110880 CORO1C 174533 sc-eQTL 3.08e-01 0.255 0.25 0.052 PB L2
ENSG00000110906 KCTD10 -571230 sc-eQTL 6.16e-01 0.135 0.268 0.052 PB L2
ENSG00000110921 MVK -667126 sc-eQTL 1.66e-02 0.596 0.245 0.052 PB L2
ENSG00000135093 USP30 -116960 sc-eQTL 5.28e-01 0.157 0.248 0.052 PB L2
ENSG00000136003 ISCU 343547 sc-eQTL 1.25e-01 0.289 0.187 0.052 PB L2
ENSG00000139428 MMAB -667451 sc-eQTL 6.57e-02 -0.443 0.238 0.052 PB L2
ENSG00000139433 GLTP -974412 sc-eQTL 1.26e-01 -0.403 0.262 0.052 PB L2
ENSG00000139437 TCHP -994135 sc-eQTL 6.51e-01 -0.112 0.247 0.052 PB L2
ENSG00000151148 UBE3B -571273 sc-eQTL 1.15e-01 0.401 0.252 0.052 PB L2
ENSG00000189046 ALKBH2 -187502 sc-eQTL 3.34e-01 -0.252 0.26 0.052 PB L2
ENSG00000198855 FICD 390852 sc-eQTL 1.79e-01 -0.251 0.186 0.052 PB L2
ENSG00000256262 USP30-AS1 -147823 sc-eQTL 6.77e-01 0.101 0.243 0.052 PB L2
ENSG00000257221 AC007569.1 277461 sc-eQTL 8.48e-01 -0.0437 0.227 0.052 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139433 GLTP -974412 eQTL 0.0105 0.0899 0.0351 0.00188 0.0 0.0491
ENSG00000257221 AC007569.1 277442 eQTL 0.00643 0.186 0.0681 0.0 0.0 0.0491

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000183160 \N 307809 1.27e-06 9.31e-07 2.95e-07 6.49e-07 2.33e-07 4.7e-07 1.21e-06 3.28e-07 1.2e-06 4.11e-07 1.35e-06 5.98e-07 1.75e-06 2.54e-07 4.26e-07 6.94e-07 8.4e-07 5.47e-07 5.29e-07 6.91e-07 4.19e-07 1.04e-06 7.76e-07 6.21e-07 1.92e-06 3.47e-07 7.27e-07 6e-07 9.81e-07 1.13e-06 5.47e-07 1.9e-07 2.29e-07 5.53e-07 4.2e-07 4.41e-07 3.62e-07 1.61e-07 1.51e-07 4.17e-08 2.12e-07 1.5e-06 9.6e-08 1.27e-08 2.25e-07 1.02e-07 1.9e-07 9.04e-08 9.51e-08