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Genes within 1Mb (chr12:108575762:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075856 SART3 14362 sc-eQTL 1.74e-01 -0.302 0.222 0.949 B_Activated L2
ENSG00000076248 UNG -521812 sc-eQTL 3.72e-01 -0.175 0.195 0.949 B_Activated L2
ENSG00000076555 ACACB -540833 sc-eQTL 5.40e-01 0.108 0.175 0.949 B_Activated L2
ENSG00000084112 SSH1 -281828 sc-eQTL 7.25e-01 -0.0707 0.201 0.949 B_Activated L2
ENSG00000110851 PRDM4 814490 sc-eQTL 4.28e-01 -0.143 0.18 0.949 B_Activated L2
ENSG00000110876 SELPLG -58197 sc-eQTL 9.58e-01 -0.00982 0.186 0.949 B_Activated L2
ENSG00000110880 CORO1C -155834 sc-eQTL 5.27e-01 0.139 0.219 0.949 B_Activated L2
ENSG00000110906 KCTD10 -901597 sc-eQTL 5.39e-01 -0.127 0.206 0.949 B_Activated L2
ENSG00000110921 MVK -997493 sc-eQTL 2.78e-01 -0.211 0.194 0.949 B_Activated L2
ENSG00000135093 USP30 -447327 sc-eQTL 9.73e-01 -0.00655 0.193 0.949 B_Activated L2
ENSG00000136003 ISCU 13180 sc-eQTL 1.13e-03 -0.654 0.197 0.949 B_Activated L2
ENSG00000136045 PWP1 889963 sc-eQTL 3.50e-01 0.194 0.206 0.949 B_Activated L2
ENSG00000139428 MMAB -997818 sc-eQTL 6.41e-02 -0.374 0.201 0.949 B_Activated L2
ENSG00000151148 UBE3B -901640 sc-eQTL 9.04e-01 -0.0262 0.218 0.949 B_Activated L2
ENSG00000189046 ALKBH2 -517869 sc-eQTL 5.11e-01 0.136 0.207 0.949 B_Activated L2
ENSG00000198855 FICD 60485 sc-eQTL 8.41e-01 0.0373 0.185 0.949 B_Activated L2
ENSG00000256262 USP30-AS1 -478190 sc-eQTL 5.46e-01 -0.118 0.195 0.949 B_Activated L2
ENSG00000257221 AC007569.1 -52906 sc-eQTL 6.77e-01 -0.0932 0.223 0.949 B_Activated L2
ENSG00000075856 SART3 14362 sc-eQTL 1.53e-01 -0.312 0.217 0.948 CD4_CTL L2
ENSG00000076248 UNG -521812 sc-eQTL 9.55e-01 -0.0111 0.196 0.948 CD4_CTL L2
ENSG00000076555 ACACB -540833 sc-eQTL 2.56e-01 -0.211 0.185 0.948 CD4_CTL L2
ENSG00000084112 SSH1 -281828 sc-eQTL 1.61e-01 0.279 0.199 0.948 CD4_CTL L2
ENSG00000110851 PRDM4 814490 sc-eQTL 3.38e-01 0.198 0.206 0.948 CD4_CTL L2
ENSG00000110876 SELPLG -58197 sc-eQTL 9.10e-01 0.016 0.141 0.948 CD4_CTL L2
ENSG00000110906 KCTD10 -901597 sc-eQTL 8.61e-01 -0.0383 0.218 0.948 CD4_CTL L2
ENSG00000110921 MVK -997493 sc-eQTL 2.21e-01 -0.244 0.198 0.948 CD4_CTL L2
ENSG00000135093 USP30 -447327 sc-eQTL 8.51e-01 0.0377 0.2 0.948 CD4_CTL L2
ENSG00000136003 ISCU 13180 sc-eQTL 1.44e-02 -0.445 0.18 0.948 CD4_CTL L2
ENSG00000136045 PWP1 889963 sc-eQTL 5.39e-01 0.127 0.207 0.948 CD4_CTL L2
ENSG00000139428 MMAB -997818 sc-eQTL 8.24e-02 0.366 0.209 0.948 CD4_CTL L2
ENSG00000151148 UBE3B -901640 sc-eQTL 1.33e-01 -0.325 0.215 0.948 CD4_CTL L2
ENSG00000189046 ALKBH2 -517869 sc-eQTL 4.99e-01 -0.14 0.207 0.948 CD4_CTL L2
ENSG00000198855 FICD 60485 sc-eQTL 7.07e-01 -0.0707 0.188 0.948 CD4_CTL L2
ENSG00000256139 AC007637.1 -535456 sc-eQTL 7.74e-02 0.278 0.157 0.948 CD4_CTL L2
ENSG00000256262 USP30-AS1 -478190 sc-eQTL 6.85e-01 -0.0845 0.208 0.948 CD4_CTL L2
ENSG00000075856 SART3 14362 sc-eQTL 7.91e-01 0.0588 0.221 0.949 CD8_TCM L2
ENSG00000076248 UNG -521812 sc-eQTL 3.53e-01 0.18 0.194 0.949 CD8_TCM L2
ENSG00000076555 ACACB -540833 sc-eQTL 7.19e-01 -0.0725 0.201 0.949 CD8_TCM L2
ENSG00000084112 SSH1 -281828 sc-eQTL 9.51e-01 -0.0128 0.209 0.949 CD8_TCM L2
ENSG00000110851 PRDM4 814490 sc-eQTL 8.05e-01 0.048 0.194 0.949 CD8_TCM L2
ENSG00000110876 SELPLG -58197 sc-eQTL 9.20e-01 -0.0126 0.125 0.949 CD8_TCM L2
ENSG00000110880 CORO1C -155834 sc-eQTL 3.06e-01 0.19 0.185 0.949 CD8_TCM L2
ENSG00000110906 KCTD10 -901597 sc-eQTL 6.60e-01 -0.0882 0.2 0.949 CD8_TCM L2
ENSG00000110921 MVK -997493 sc-eQTL 8.63e-02 0.365 0.212 0.949 CD8_TCM L2
ENSG00000135093 USP30 -447327 sc-eQTL 8.06e-01 0.0508 0.206 0.949 CD8_TCM L2
ENSG00000136003 ISCU 13180 sc-eQTL 2.18e-03 -0.602 0.194 0.949 CD8_TCM L2
ENSG00000136045 PWP1 889963 sc-eQTL 3.23e-01 -0.207 0.209 0.949 CD8_TCM L2
ENSG00000139428 MMAB -997818 sc-eQTL 2.50e-01 -0.23 0.199 0.949 CD8_TCM L2
ENSG00000151148 UBE3B -901640 sc-eQTL 8.99e-01 -0.0276 0.218 0.949 CD8_TCM L2
ENSG00000174600 CMKLR1 236445 sc-eQTL 7.80e-01 0.0196 0.07 0.949 CD8_TCM L2
ENSG00000189046 ALKBH2 -517869 sc-eQTL 2.59e-01 0.233 0.206 0.949 CD8_TCM L2
ENSG00000198855 FICD 60485 sc-eQTL 3.43e-01 -0.188 0.197 0.949 CD8_TCM L2
ENSG00000256262 USP30-AS1 -478190 sc-eQTL 4.88e-01 -0.135 0.195 0.949 CD8_TCM L2
ENSG00000075856 SART3 14362 sc-eQTL 2.43e-01 -0.284 0.242 0.944 PB L2
ENSG00000076248 UNG -521812 sc-eQTL 2.21e-01 -0.269 0.218 0.944 PB L2
ENSG00000076555 ACACB -540833 sc-eQTL 9.93e-02 0.335 0.202 0.944 PB L2
ENSG00000084112 SSH1 -281828 sc-eQTL 3.26e-01 0.223 0.226 0.944 PB L2
ENSG00000110851 PRDM4 814490 sc-eQTL 6.01e-01 -0.0894 0.171 0.944 PB L2
ENSG00000110876 SELPLG -58197 sc-eQTL 5.46e-01 0.09 0.149 0.944 PB L2
ENSG00000110880 CORO1C -155834 sc-eQTL 9.99e-02 0.365 0.22 0.944 PB L2
ENSG00000110906 KCTD10 -901597 sc-eQTL 6.06e-01 0.123 0.238 0.944 PB L2
ENSG00000110921 MVK -997493 sc-eQTL 8.06e-01 -0.0548 0.223 0.944 PB L2
ENSG00000135093 USP30 -447327 sc-eQTL 7.37e-01 -0.0744 0.221 0.944 PB L2
ENSG00000136003 ISCU 13180 sc-eQTL 2.50e-01 -0.193 0.167 0.944 PB L2
ENSG00000136045 PWP1 889963 sc-eQTL 5.47e-01 -0.123 0.204 0.944 PB L2
ENSG00000139428 MMAB -997818 sc-eQTL 8.20e-01 0.0489 0.215 0.944 PB L2
ENSG00000151148 UBE3B -901640 sc-eQTL 5.71e-01 0.129 0.226 0.944 PB L2
ENSG00000189046 ALKBH2 -517869 sc-eQTL 2.17e-01 0.286 0.23 0.944 PB L2
ENSG00000198855 FICD 60485 sc-eQTL 9.64e-01 0.00753 0.167 0.944 PB L2
ENSG00000256262 USP30-AS1 -478190 sc-eQTL 6.22e-01 -0.107 0.215 0.944 PB L2
ENSG00000257221 AC007569.1 -52906 sc-eQTL 7.97e-01 0.0521 0.202 0.944 PB L2
ENSG00000075856 SART3 14362 sc-eQTL 5.27e-01 0.125 0.197 0.95 Pro_T L2
ENSG00000076248 UNG -521812 sc-eQTL 5.68e-01 -0.0837 0.146 0.95 Pro_T L2
ENSG00000076555 ACACB -540833 sc-eQTL 4.94e-02 0.348 0.176 0.95 Pro_T L2
ENSG00000084112 SSH1 -281828 sc-eQTL 9.00e-01 -0.0229 0.182 0.95 Pro_T L2
ENSG00000110851 PRDM4 814490 sc-eQTL 7.17e-01 0.0744 0.205 0.95 Pro_T L2
ENSG00000110876 SELPLG -58197 sc-eQTL 4.98e-01 0.092 0.135 0.95 Pro_T L2
ENSG00000110880 CORO1C -155834 sc-eQTL 4.27e-01 0.11 0.138 0.95 Pro_T L2
ENSG00000110906 KCTD10 -901597 sc-eQTL 3.70e-01 0.172 0.192 0.95 Pro_T L2
ENSG00000110921 MVK -997493 sc-eQTL 8.62e-01 0.033 0.19 0.95 Pro_T L2
ENSG00000135093 USP30 -447327 sc-eQTL 1.13e-01 -0.307 0.193 0.95 Pro_T L2
ENSG00000136003 ISCU 13180 sc-eQTL 2.72e-01 -0.16 0.145 0.95 Pro_T L2
ENSG00000136045 PWP1 889963 sc-eQTL 1.05e-01 0.258 0.158 0.95 Pro_T L2
ENSG00000139428 MMAB -997818 sc-eQTL 6.78e-01 -0.0771 0.186 0.95 Pro_T L2
ENSG00000151148 UBE3B -901640 sc-eQTL 2.43e-01 0.237 0.202 0.95 Pro_T L2
ENSG00000174600 CMKLR1 236445 sc-eQTL 8.24e-01 -0.0328 0.147 0.95 Pro_T L2
ENSG00000189046 ALKBH2 -517869 sc-eQTL 4.54e-01 -0.137 0.183 0.95 Pro_T L2
ENSG00000198855 FICD 60485 sc-eQTL 4.32e-01 0.138 0.175 0.95 Pro_T L2
ENSG00000256262 USP30-AS1 -478190 sc-eQTL 9.31e-01 0.0155 0.178 0.95 Pro_T L2
ENSG00000257221 AC007569.1 -52906 sc-eQTL 7.32e-01 0.0304 0.0888 0.95 Pro_T L2
ENSG00000075856 SART3 14362 sc-eQTL 5.07e-01 0.133 0.2 0.949 intMono L2
ENSG00000076555 ACACB -540833 sc-eQTL 7.97e-01 0.0463 0.179 0.949 intMono L2
ENSG00000084112 SSH1 -281828 sc-eQTL 9.04e-01 0.0221 0.183 0.949 intMono L2
ENSG00000110851 PRDM4 814490 sc-eQTL 2.47e-01 -0.227 0.196 0.949 intMono L2
ENSG00000110876 SELPLG -58197 sc-eQTL 8.44e-02 0.243 0.14 0.949 intMono L2
ENSG00000110880 CORO1C -155834 sc-eQTL 1.77e-01 -0.212 0.157 0.949 intMono L2
ENSG00000110906 KCTD10 -901597 sc-eQTL 8.44e-03 -0.52 0.195 0.949 intMono L2
ENSG00000110921 MVK -997493 sc-eQTL 1.15e-02 0.475 0.186 0.949 intMono L2
ENSG00000135093 USP30 -447327 sc-eQTL 2.66e-01 0.209 0.187 0.949 intMono L2
ENSG00000136003 ISCU 13180 sc-eQTL 4.28e-02 -0.401 0.197 0.949 intMono L2
ENSG00000136045 PWP1 889963 sc-eQTL 3.81e-01 0.173 0.198 0.949 intMono L2
ENSG00000139428 MMAB -997818 sc-eQTL 3.49e-01 -0.186 0.198 0.949 intMono L2
ENSG00000151148 UBE3B -901640 sc-eQTL 6.39e-01 0.0889 0.189 0.949 intMono L2
ENSG00000174600 CMKLR1 236445 sc-eQTL 5.17e-01 -0.11 0.169 0.949 intMono L2
ENSG00000189046 ALKBH2 -517869 sc-eQTL 3.76e-01 0.174 0.196 0.949 intMono L2
ENSG00000198855 FICD 60485 sc-eQTL 5.62e-01 0.109 0.188 0.949 intMono L2
ENSG00000256262 USP30-AS1 -478190 sc-eQTL 8.19e-01 0.0387 0.169 0.949 intMono L2
ENSG00000075856 SART3 14362 sc-eQTL 7.59e-01 0.0576 0.187 0.948 ncMono L2
ENSG00000076555 ACACB -540833 sc-eQTL 8.60e-01 0.0314 0.177 0.948 ncMono L2
ENSG00000084112 SSH1 -281828 sc-eQTL 8.42e-01 0.0338 0.169 0.948 ncMono L2
ENSG00000110851 PRDM4 814490 sc-eQTL 7.14e-01 -0.0613 0.167 0.948 ncMono L2
ENSG00000110876 SELPLG -58197 sc-eQTL 7.26e-01 -0.0359 0.102 0.948 ncMono L2
ENSG00000110880 CORO1C -155834 sc-eQTL 5.82e-01 -0.104 0.188 0.948 ncMono L2
ENSG00000110906 KCTD10 -901597 sc-eQTL 9.71e-01 -0.00722 0.196 0.948 ncMono L2
ENSG00000110921 MVK -997493 sc-eQTL 5.35e-01 0.118 0.189 0.948 ncMono L2
ENSG00000135093 USP30 -447327 sc-eQTL 5.83e-01 -0.111 0.202 0.948 ncMono L2
ENSG00000136003 ISCU 13180 sc-eQTL 1.96e-02 -0.408 0.173 0.948 ncMono L2
ENSG00000136045 PWP1 889963 sc-eQTL 7.62e-01 0.0544 0.18 0.948 ncMono L2
ENSG00000139428 MMAB -997818 sc-eQTL 4.76e-01 0.139 0.194 0.948 ncMono L2
ENSG00000151148 UBE3B -901640 sc-eQTL 8.04e-01 0.0492 0.198 0.948 ncMono L2
ENSG00000174600 CMKLR1 236445 sc-eQTL 8.44e-01 -0.0335 0.17 0.948 ncMono L2
ENSG00000189046 ALKBH2 -517869 sc-eQTL 5.95e-01 0.106 0.198 0.948 ncMono L2
ENSG00000198855 FICD 60485 sc-eQTL 8.52e-01 0.0341 0.182 0.948 ncMono L2
ENSG00000256262 USP30-AS1 -478190 sc-eQTL 8.70e-01 0.0299 0.183 0.948 ncMono L2
ENSG00000075856 SART3 14362 sc-eQTL 8.11e-01 -0.0508 0.212 0.949 pDC L2
ENSG00000076248 UNG -521812 sc-eQTL 6.81e-01 0.0814 0.197 0.949 pDC L2
ENSG00000076555 ACACB -540833 sc-eQTL 7.28e-02 0.363 0.201 0.949 pDC L2
ENSG00000084112 SSH1 -281828 sc-eQTL 6.82e-01 0.0878 0.213 0.949 pDC L2
ENSG00000110851 PRDM4 814490 sc-eQTL 3.34e-01 0.229 0.236 0.949 pDC L2
ENSG00000110876 SELPLG -58197 sc-eQTL 3.50e-01 -0.132 0.141 0.949 pDC L2
ENSG00000110880 CORO1C -155834 sc-eQTL 4.95e-01 0.106 0.155 0.949 pDC L2
ENSG00000110906 KCTD10 -901597 sc-eQTL 3.41e-01 -0.227 0.238 0.949 pDC L2
ENSG00000110921 MVK -997493 sc-eQTL 5.57e-01 0.117 0.199 0.949 pDC L2
ENSG00000135093 USP30 -447327 sc-eQTL 8.09e-03 0.548 0.204 0.949 pDC L2
ENSG00000136003 ISCU 13180 sc-eQTL 1.05e-01 -0.286 0.176 0.949 pDC L2
ENSG00000136045 PWP1 889963 sc-eQTL 1.29e-01 0.317 0.207 0.949 pDC L2
ENSG00000139428 MMAB -997818 sc-eQTL 7.23e-02 0.375 0.207 0.949 pDC L2
ENSG00000151148 UBE3B -901640 sc-eQTL 4.97e-01 -0.154 0.226 0.949 pDC L2
ENSG00000174600 CMKLR1 236445 sc-eQTL 8.82e-02 0.246 0.144 0.949 pDC L2
ENSG00000189046 ALKBH2 -517869 sc-eQTL 8.03e-02 -0.355 0.201 0.949 pDC L2
ENSG00000198855 FICD 60485 sc-eQTL 7.87e-01 0.055 0.203 0.949 pDC L2
ENSG00000256262 USP30-AS1 -478190 sc-eQTL 6.93e-01 0.0744 0.188 0.949 pDC L2
ENSG00000257221 AC007569.1 -52906 sc-eQTL 2.50e-01 0.228 0.197 0.949 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000075856 SART3 14362 eQTL 6.94e-21 -0.388 0.0404 0.0 0.0 0.0471
ENSG00000136003 ISCU 13161 eQTL 5.989999999999999e-138 -1.19 0.04 0.0 0.0235 0.0471
ENSG00000183160 TMEM119 -22558 eQTL 0.00218 0.11 0.0359 0.0 0.0 0.0471

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000075856 SART3 14362 3.86e-05 3.34e-05 6.4e-06 1.58e-05 6.02e-06 1.46e-05 4.59e-05 4.65e-06 3.23e-05 1.6e-05 3.92e-05 1.79e-05 4.89e-05 1.43e-05 7.12e-06 2e-05 1.83e-05 2.61e-05 7.94e-06 6.89e-06 1.59e-05 3.46e-05 3.3e-05 9.31e-06 4.56e-05 8.28e-06 1.47e-05 1.33e-05 3.31e-05 2.59e-05 2.08e-05 1.64e-06 2.61e-06 7.1e-06 1.19e-05 5.85e-06 3.16e-06 3.11e-06 4.8e-06 3.36e-06 1.76e-06 3.89e-05 3.74e-06 3.62e-07 2.59e-06 3.94e-06 4.11e-06 1.57e-06 1.52e-06
ENSG00000136003 ISCU 13161 3.86e-05 3.34e-05 6.4e-06 1.58e-05 6.02e-06 1.48e-05 4.66e-05 4.65e-06 3.27e-05 1.6e-05 3.92e-05 1.82e-05 4.89e-05 1.43e-05 7.14e-06 2e-05 1.84e-05 2.66e-05 7.94e-06 6.89e-06 1.6e-05 3.46e-05 3.3e-05 9.31e-06 4.56e-05 8.34e-06 1.47e-05 1.33e-05 3.31e-05 2.59e-05 2.08e-05 1.64e-06 2.61e-06 7.1e-06 1.2e-05 5.78e-06 3.16e-06 3.11e-06 4.8e-06 3.36e-06 1.76e-06 3.89e-05 3.74e-06 3.62e-07 2.59e-06 3.94e-06 4.11e-06 1.57e-06 1.52e-06
ENSG00000183160 TMEM119 -22558 3.98e-05 3.29e-05 6.31e-06 1.55e-05 5.94e-06 1.46e-05 4.55e-05 4.49e-06 3.18e-05 1.57e-05 3.84e-05 1.78e-05 4.85e-05 1.41e-05 6.98e-06 1.94e-05 1.8e-05 2.59e-05 7.86e-06 6.75e-06 1.54e-05 3.41e-05 3.27e-05 9.09e-06 4.49e-05 8.26e-06 1.42e-05 1.3e-05 3.26e-05 2.57e-05 2.03e-05 1.64e-06 2.57e-06 7.07e-06 1.17e-05 5.85e-06 3.13e-06 3.16e-06 4.75e-06 3.3e-06 1.76e-06 3.81e-05 3.74e-06 3.55e-07 2.49e-06 3.9e-06 4.14e-06 1.58e-06 1.52e-06