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Genes within 1Mb (chr12:108538324:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075856 SART3 -23076 sc-eQTL 2.42e-01 -0.27 0.23 0.948 CD4_CTL L2
ENSG00000076248 UNG -559250 sc-eQTL 5.28e-01 -0.131 0.207 0.948 CD4_CTL L2
ENSG00000076555 ACACB -578271 sc-eQTL 3.30e-01 0.191 0.196 0.948 CD4_CTL L2
ENSG00000084112 SSH1 -319266 sc-eQTL 1.16e-01 0.331 0.21 0.948 CD4_CTL L2
ENSG00000110851 PRDM4 777052 sc-eQTL 1.50e-01 0.314 0.217 0.948 CD4_CTL L2
ENSG00000110876 SELPLG -95635 sc-eQTL 8.81e-01 0.0224 0.149 0.948 CD4_CTL L2
ENSG00000110906 KCTD10 -939035 sc-eQTL 7.46e-01 -0.0747 0.23 0.948 CD4_CTL L2
ENSG00000135093 USP30 -484765 sc-eQTL 9.86e-01 0.00376 0.211 0.948 CD4_CTL L2
ENSG00000136003 ISCU -24258 sc-eQTL 1.99e-01 -0.248 0.192 0.948 CD4_CTL L2
ENSG00000136045 PWP1 852525 sc-eQTL 4.23e-01 0.176 0.219 0.948 CD4_CTL L2
ENSG00000151148 UBE3B -939078 sc-eQTL 7.90e-01 -0.0611 0.229 0.948 CD4_CTL L2
ENSG00000189046 ALKBH2 -555307 sc-eQTL 4.98e-01 -0.149 0.219 0.948 CD4_CTL L2
ENSG00000198855 FICD 23047 sc-eQTL 4.50e-01 0.15 0.198 0.948 CD4_CTL L2
ENSG00000256139 AC007637.1 -572894 sc-eQTL 1.07e-01 0.269 0.166 0.948 CD4_CTL L2
ENSG00000256262 USP30-AS1 -515628 sc-eQTL 1.74e-01 -0.299 0.219 0.948 CD4_CTL L2
ENSG00000075856 SART3 -23076 sc-eQTL 1.26e-01 0.354 0.23 0.949 CD8_TCM L2
ENSG00000076248 UNG -559250 sc-eQTL 3.33e-01 0.196 0.202 0.949 CD8_TCM L2
ENSG00000076555 ACACB -578271 sc-eQTL 7.14e-01 -0.0773 0.21 0.949 CD8_TCM L2
ENSG00000084112 SSH1 -319266 sc-eQTL 2.10e-01 0.274 0.218 0.949 CD8_TCM L2
ENSG00000110851 PRDM4 777052 sc-eQTL 4.17e-01 0.164 0.202 0.949 CD8_TCM L2
ENSG00000110876 SELPLG -95635 sc-eQTL 6.20e-01 -0.0651 0.131 0.949 CD8_TCM L2
ENSG00000110880 CORO1C -193272 sc-eQTL 7.49e-02 0.344 0.192 0.949 CD8_TCM L2
ENSG00000110906 KCTD10 -939035 sc-eQTL 4.97e-01 0.142 0.209 0.949 CD8_TCM L2
ENSG00000135093 USP30 -484765 sc-eQTL 5.32e-01 0.135 0.215 0.949 CD8_TCM L2
ENSG00000136003 ISCU -24258 sc-eQTL 1.23e-03 -0.662 0.202 0.949 CD8_TCM L2
ENSG00000136045 PWP1 852525 sc-eQTL 6.59e-01 -0.0966 0.218 0.949 CD8_TCM L2
ENSG00000151148 UBE3B -939078 sc-eQTL 4.37e-01 -0.177 0.227 0.949 CD8_TCM L2
ENSG00000174600 CMKLR1 199007 sc-eQTL 7.18e-01 0.0265 0.0731 0.949 CD8_TCM L2
ENSG00000189046 ALKBH2 -555307 sc-eQTL 3.73e-01 0.193 0.216 0.949 CD8_TCM L2
ENSG00000198855 FICD 23047 sc-eQTL 4.77e-01 -0.147 0.206 0.949 CD8_TCM L2
ENSG00000256262 USP30-AS1 -515628 sc-eQTL 3.83e-01 -0.178 0.203 0.949 CD8_TCM L2
ENSG00000075856 SART3 -23076 sc-eQTL 6.07e-01 -0.135 0.261 0.944 PB L2
ENSG00000076248 UNG -559250 sc-eQTL 4.52e-01 -0.177 0.235 0.944 PB L2
ENSG00000076555 ACACB -578271 sc-eQTL 6.29e-01 0.106 0.218 0.944 PB L2
ENSG00000084112 SSH1 -319266 sc-eQTL 1.77e-01 0.328 0.241 0.944 PB L2
ENSG00000110851 PRDM4 777052 sc-eQTL 7.81e-01 -0.051 0.183 0.944 PB L2
ENSG00000110876 SELPLG -95635 sc-eQTL 2.26e-01 0.193 0.159 0.944 PB L2
ENSG00000110880 CORO1C -193272 sc-eQTL 1.96e-02 0.551 0.233 0.944 PB L2
ENSG00000110906 KCTD10 -939035 sc-eQTL 4.53e-01 0.192 0.254 0.944 PB L2
ENSG00000135093 USP30 -484765 sc-eQTL 9.90e-01 0.00283 0.237 0.944 PB L2
ENSG00000136003 ISCU -24258 sc-eQTL 3.27e-01 -0.177 0.179 0.944 PB L2
ENSG00000136045 PWP1 852525 sc-eQTL 4.04e-01 -0.182 0.218 0.944 PB L2
ENSG00000151148 UBE3B -939078 sc-eQTL 5.09e-01 0.16 0.242 0.944 PB L2
ENSG00000189046 ALKBH2 -555307 sc-eQTL 6.90e-01 0.0993 0.248 0.944 PB L2
ENSG00000198855 FICD 23047 sc-eQTL 9.93e-01 -0.00165 0.178 0.944 PB L2
ENSG00000256262 USP30-AS1 -515628 sc-eQTL 6.45e-01 -0.107 0.231 0.944 PB L2
ENSG00000257221 AC007569.1 -90344 sc-eQTL 6.17e-01 0.108 0.216 0.944 PB L2
ENSG00000075856 SART3 -23076 sc-eQTL 4.19e-01 -0.168 0.208 0.95 Pro_T L2
ENSG00000076248 UNG -559250 sc-eQTL 1.41e-01 -0.228 0.154 0.95 Pro_T L2
ENSG00000076555 ACACB -578271 sc-eQTL 4.50e-01 0.142 0.188 0.95 Pro_T L2
ENSG00000084112 SSH1 -319266 sc-eQTL 8.12e-01 0.0458 0.193 0.95 Pro_T L2
ENSG00000110851 PRDM4 777052 sc-eQTL 9.20e-01 -0.0217 0.216 0.95 Pro_T L2
ENSG00000110876 SELPLG -95635 sc-eQTL 9.40e-01 -0.0107 0.143 0.95 Pro_T L2
ENSG00000110880 CORO1C -193272 sc-eQTL 8.04e-01 0.0362 0.146 0.95 Pro_T L2
ENSG00000110906 KCTD10 -939035 sc-eQTL 3.75e-01 0.18 0.203 0.95 Pro_T L2
ENSG00000135093 USP30 -484765 sc-eQTL 1.27e-01 -0.313 0.204 0.95 Pro_T L2
ENSG00000136003 ISCU -24258 sc-eQTL 2.91e-02 -0.334 0.152 0.95 Pro_T L2
ENSG00000136045 PWP1 852525 sc-eQTL 6.54e-01 0.0755 0.168 0.95 Pro_T L2
ENSG00000151148 UBE3B -939078 sc-eQTL 5.70e-02 0.406 0.212 0.95 Pro_T L2
ENSG00000174600 CMKLR1 199007 sc-eQTL 3.19e-01 -0.155 0.155 0.95 Pro_T L2
ENSG00000189046 ALKBH2 -555307 sc-eQTL 5.37e-01 -0.12 0.193 0.95 Pro_T L2
ENSG00000198855 FICD 23047 sc-eQTL 1.17e-01 0.291 0.184 0.95 Pro_T L2
ENSG00000256262 USP30-AS1 -515628 sc-eQTL 2.41e-01 0.221 0.188 0.95 Pro_T L2
ENSG00000257221 AC007569.1 -90344 sc-eQTL 8.22e-01 -0.0211 0.0939 0.95 Pro_T L2
ENSG00000075856 SART3 -23076 sc-eQTL 8.86e-01 -0.0306 0.213 0.949 intMono L2
ENSG00000076555 ACACB -578271 sc-eQTL 5.41e-01 0.116 0.19 0.949 intMono L2
ENSG00000084112 SSH1 -319266 sc-eQTL 8.55e-01 0.0356 0.195 0.949 intMono L2
ENSG00000110851 PRDM4 777052 sc-eQTL 9.69e-01 0.008 0.209 0.949 intMono L2
ENSG00000110876 SELPLG -95635 sc-eQTL 3.52e-01 0.14 0.15 0.949 intMono L2
ENSG00000110880 CORO1C -193272 sc-eQTL 4.35e-01 -0.131 0.167 0.949 intMono L2
ENSG00000110906 KCTD10 -939035 sc-eQTL 5.11e-02 -0.41 0.209 0.949 intMono L2
ENSG00000135093 USP30 -484765 sc-eQTL 3.58e-01 0.183 0.199 0.949 intMono L2
ENSG00000136003 ISCU -24258 sc-eQTL 1.70e-01 -0.289 0.21 0.949 intMono L2
ENSG00000136045 PWP1 852525 sc-eQTL 2.24e-01 0.255 0.21 0.949 intMono L2
ENSG00000151148 UBE3B -939078 sc-eQTL 6.20e-01 0.0996 0.201 0.949 intMono L2
ENSG00000174600 CMKLR1 199007 sc-eQTL 8.92e-01 -0.0244 0.18 0.949 intMono L2
ENSG00000189046 ALKBH2 -555307 sc-eQTL 8.81e-01 -0.0312 0.209 0.949 intMono L2
ENSG00000198855 FICD 23047 sc-eQTL 5.52e-01 -0.119 0.2 0.949 intMono L2
ENSG00000256262 USP30-AS1 -515628 sc-eQTL 6.88e-01 0.0722 0.18 0.949 intMono L2
ENSG00000075856 SART3 -23076 sc-eQTL 5.04e-01 0.135 0.203 0.948 ncMono L2
ENSG00000076555 ACACB -578271 sc-eQTL 4.89e-01 -0.133 0.192 0.948 ncMono L2
ENSG00000084112 SSH1 -319266 sc-eQTL 7.15e-01 0.0671 0.183 0.948 ncMono L2
ENSG00000110851 PRDM4 777052 sc-eQTL 5.03e-01 -0.121 0.181 0.948 ncMono L2
ENSG00000110876 SELPLG -95635 sc-eQTL 7.09e-01 -0.0414 0.111 0.948 ncMono L2
ENSG00000110880 CORO1C -193272 sc-eQTL 7.31e-01 -0.0702 0.204 0.948 ncMono L2
ENSG00000110906 KCTD10 -939035 sc-eQTL 3.31e-01 0.207 0.212 0.948 ncMono L2
ENSG00000135093 USP30 -484765 sc-eQTL 2.04e-01 -0.278 0.218 0.948 ncMono L2
ENSG00000136003 ISCU -24258 sc-eQTL 9.56e-02 -0.316 0.189 0.948 ncMono L2
ENSG00000136045 PWP1 852525 sc-eQTL 6.39e-01 0.0913 0.194 0.948 ncMono L2
ENSG00000151148 UBE3B -939078 sc-eQTL 6.66e-01 0.0928 0.215 0.948 ncMono L2
ENSG00000174600 CMKLR1 199007 sc-eQTL 8.86e-01 0.0264 0.184 0.948 ncMono L2
ENSG00000189046 ALKBH2 -555307 sc-eQTL 2.27e-01 -0.26 0.214 0.948 ncMono L2
ENSG00000198855 FICD 23047 sc-eQTL 9.07e-01 0.023 0.197 0.948 ncMono L2
ENSG00000256262 USP30-AS1 -515628 sc-eQTL 5.45e-01 -0.12 0.198 0.948 ncMono L2
ENSG00000075856 SART3 -23076 sc-eQTL 7.85e-01 -0.0595 0.218 0.946 pDC L2
ENSG00000076248 UNG -559250 sc-eQTL 2.29e-01 0.244 0.203 0.946 pDC L2
ENSG00000076555 ACACB -578271 sc-eQTL 8.11e-02 0.364 0.207 0.946 pDC L2
ENSG00000084112 SSH1 -319266 sc-eQTL 4.43e-01 0.169 0.22 0.946 pDC L2
ENSG00000110851 PRDM4 777052 sc-eQTL 8.63e-01 0.0424 0.244 0.946 pDC L2
ENSG00000110876 SELPLG -95635 sc-eQTL 4.41e-01 -0.112 0.145 0.946 pDC L2
ENSG00000110880 CORO1C -193272 sc-eQTL 5.63e-01 0.0927 0.16 0.946 pDC L2
ENSG00000110906 KCTD10 -939035 sc-eQTL 6.30e-01 -0.119 0.246 0.946 pDC L2
ENSG00000135093 USP30 -484765 sc-eQTL 5.48e-03 0.592 0.21 0.946 pDC L2
ENSG00000136003 ISCU -24258 sc-eQTL 2.29e-01 -0.219 0.182 0.946 pDC L2
ENSG00000136045 PWP1 852525 sc-eQTL 1.66e-01 0.298 0.214 0.946 pDC L2
ENSG00000151148 UBE3B -939078 sc-eQTL 3.36e-01 -0.224 0.232 0.946 pDC L2
ENSG00000174600 CMKLR1 199007 sc-eQTL 9.37e-02 0.25 0.148 0.946 pDC L2
ENSG00000189046 ALKBH2 -555307 sc-eQTL 5.45e-02 -0.401 0.207 0.946 pDC L2
ENSG00000198855 FICD 23047 sc-eQTL 3.46e-01 0.198 0.209 0.946 pDC L2
ENSG00000256262 USP30-AS1 -515628 sc-eQTL 3.14e-01 0.195 0.193 0.946 pDC L2
ENSG00000257221 AC007569.1 -90344 sc-eQTL 2.11e-01 0.255 0.203 0.946 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000075856 SART3 -23076 eQTL 1.92e-24 -0.382 0.0364 0.00126 0.00345 0.0643
ENSG00000136003 ISCU -24277 eQTL 2.22e-93 -0.932 0.0405 0.0 0.0 0.0643
ENSG00000136045 PWP1 852525 eQTL 0.0362 0.0756 0.036 0.0 0.0 0.0643
ENSG00000183160 TMEM119 -59996 eQTL 2.21e-05 0.139 0.0325 0.0 0.0 0.0643
ENSG00000256139 AC007637.1 -572894 eQTL 0.0206 -0.175 0.0754 0.0 0.0 0.0643

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000075856 SART3 -23076 3.12e-05 3.14e-05 4.95e-06 1.47e-05 4.75e-06 1.26e-05 3.93e-05 3.93e-06 2.79e-05 1.25e-05 3.39e-05 1.52e-05 4.4e-05 1.27e-05 5.97e-06 1.48e-05 1.53e-05 2.21e-05 7.14e-06 5.66e-06 1.21e-05 2.74e-05 2.82e-05 7.63e-06 4.09e-05 6.74e-06 1.09e-05 1.04e-05 2.76e-05 2.21e-05 1.74e-05 1.58e-06 2.25e-06 5.74e-06 1.04e-05 4.53e-06 2.68e-06 2.9e-06 3.99e-06 2.82e-06 1.63e-06 3.54e-05 2.98e-06 3.6e-07 2.04e-06 2.98e-06 3.38e-06 1.5e-06 1.28e-06
ENSG00000110851 \N 777052 4.89e-07 2.88e-07 8.55e-08 4.27e-07 1.13e-07 1.85e-07 4.09e-07 6.57e-08 2.35e-07 1.65e-07 3.32e-07 2.49e-07 4.11e-07 1.01e-07 1.27e-07 1.1e-07 8.64e-08 3.02e-07 2.6e-07 1.51e-07 1.92e-07 2.48e-07 2.77e-07 1.04e-07 3.41e-07 1.86e-07 1.37e-07 1.95e-07 1.98e-07 3.93e-07 1.95e-07 1.29e-07 5.42e-08 1.39e-07 1.31e-07 1.36e-07 2.83e-07 1.24e-07 8.45e-08 4.07e-08 2.11e-07 3.43e-07 5.54e-08 1.23e-08 1.48e-07 1.59e-08 8.94e-08 8.43e-08 1.69e-07
ENSG00000136003 ISCU -24277 3.04e-05 3.1e-05 4.84e-06 1.45e-05 4.7e-06 1.23e-05 3.87e-05 3.9e-06 2.72e-05 1.23e-05 3.34e-05 1.5e-05 4.34e-05 1.26e-05 5.8e-06 1.45e-05 1.51e-05 2.17e-05 6.95e-06 5.63e-06 1.18e-05 2.7e-05 2.78e-05 7.51e-06 4.09e-05 6.6e-06 1.06e-05 1e-05 2.73e-05 2.19e-05 1.73e-05 1.62e-06 2.23e-06 5.65e-06 1.04e-05 4.55e-06 2.72e-06 2.88e-06 3.81e-06 2.77e-06 1.67e-06 3.51e-05 2.95e-06 3.6e-07 2.08e-06 2.97e-06 3.3e-06 1.52e-06 1.24e-06
ENSG00000183160 TMEM119 -59996 1.77e-05 2.43e-05 2.59e-06 1.2e-05 3.06e-06 7.79e-06 2.58e-05 3.34e-06 1.88e-05 8.28e-06 2.38e-05 9.35e-06 3.3e-05 8.78e-06 4.35e-06 1.01e-05 1.01e-05 1.52e-05 4.65e-06 4.13e-06 7.89e-06 1.71e-05 1.84e-05 4.9e-06 3.29e-05 5.29e-06 8.01e-06 7.23e-06 1.77e-05 1.55e-05 1.25e-05 1.27e-06 1.43e-06 3.89e-06 7.96e-06 3.03e-06 1.78e-06 2.39e-06 2.8e-06 1.97e-06 1.12e-06 2.6e-05 2.64e-06 3.33e-07 1.41e-06 2.35e-06 2.04e-06 7.67e-07 4.42e-07