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Genes within 1Mb (chr12:106826367:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -267182 sc-eQTL 3.59e-01 0.156 0.169 0.052 DC L1
ENSG00000013503 POLR3B 468619 sc-eQTL 6.91e-01 -0.0718 0.181 0.052 DC L1
ENSG00000110851 PRDM4 -934905 sc-eQTL 1.83e-01 -0.261 0.195 0.052 DC L1
ENSG00000111785 RIC8B 51746 sc-eQTL 7.11e-01 -0.0693 0.187 0.052 DC L1
ENSG00000120832 MTERF2 -160793 sc-eQTL 2.52e-02 -0.387 0.172 0.052 DC L1
ENSG00000136026 CKAP4 522088 sc-eQTL 5.50e-01 -0.0743 0.124 0.052 DC L1
ENSG00000136045 PWP1 -859432 sc-eQTL 2.66e-01 0.195 0.174 0.052 DC L1
ENSG00000151135 TMEM263 -129352 sc-eQTL 9.19e-02 -0.292 0.172 0.052 DC L1
ENSG00000151136 BTBD11 -492054 sc-eQTL 8.16e-03 0.431 0.161 0.052 DC L1
ENSG00000166046 TCP11L2 524438 sc-eQTL 6.98e-01 -0.0725 0.187 0.052 DC L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -267182 sc-eQTL 3.91e-01 0.163 0.189 0.056 B_Activated L2
ENSG00000013503 POLR3B 468619 sc-eQTL 8.94e-02 -0.316 0.185 0.056 B_Activated L2
ENSG00000110851 PRDM4 -934905 sc-eQTL 4.91e-01 0.119 0.172 0.056 B_Activated L2
ENSG00000111785 RIC8B 51746 sc-eQTL 8.51e-02 0.325 0.188 0.056 B_Activated L2
ENSG00000120832 MTERF2 -160793 sc-eQTL 6.63e-01 0.0641 0.147 0.056 B_Activated L2
ENSG00000136026 CKAP4 522088 sc-eQTL 9.22e-01 0.0173 0.177 0.056 B_Activated L2
ENSG00000136045 PWP1 -859432 sc-eQTL 2.41e-01 -0.232 0.197 0.056 B_Activated L2
ENSG00000151135 TMEM263 -129352 sc-eQTL 1.40e-01 0.292 0.196 0.056 B_Activated L2
ENSG00000166046 TCP11L2 524438 sc-eQTL 4.58e-01 -0.147 0.197 0.056 B_Activated L2
ENSG00000008405 CRY1 -267182 sc-eQTL 2.36e-01 0.185 0.155 0.052 CD4_CTL L2
ENSG00000013503 POLR3B 468619 sc-eQTL 8.36e-01 0.0394 0.19 0.052 CD4_CTL L2
ENSG00000110851 PRDM4 -934905 sc-eQTL 3.14e-01 -0.201 0.199 0.052 CD4_CTL L2
ENSG00000111785 RIC8B 51746 sc-eQTL 6.04e-01 -0.104 0.2 0.052 CD4_CTL L2
ENSG00000120832 MTERF2 -160793 sc-eQTL 6.04e-01 -0.099 0.191 0.052 CD4_CTL L2
ENSG00000136026 CKAP4 522088 sc-eQTL 7.55e-01 0.049 0.156 0.052 CD4_CTL L2
ENSG00000136045 PWP1 -859432 sc-eQTL 8.50e-01 -0.038 0.2 0.052 CD4_CTL L2
ENSG00000151135 TMEM263 -129352 sc-eQTL 6.07e-01 0.104 0.203 0.052 CD4_CTL L2
ENSG00000151136 BTBD11 -492054 sc-eQTL 3.10e-01 0.161 0.159 0.052 CD4_CTL L2
ENSG00000166046 TCP11L2 524438 sc-eQTL 6.88e-01 -0.0795 0.198 0.052 CD4_CTL L2
ENSG00000260329 AC007541.1 -129130 sc-eQTL 9.92e-01 -0.00169 0.17 0.052 CD4_CTL L2
ENSG00000008405 CRY1 -267182 sc-eQTL 3.90e-01 -0.148 0.172 0.051 CD8_TCM L2
ENSG00000013503 POLR3B 468619 sc-eQTL 8.41e-01 0.0412 0.205 0.051 CD8_TCM L2
ENSG00000110851 PRDM4 -934905 sc-eQTL 3.84e-01 0.168 0.193 0.051 CD8_TCM L2
ENSG00000111785 RIC8B 51746 sc-eQTL 8.91e-01 -0.0271 0.197 0.051 CD8_TCM L2
ENSG00000120832 MTERF2 -160793 sc-eQTL 4.48e-02 -0.396 0.196 0.051 CD8_TCM L2
ENSG00000136026 CKAP4 522088 sc-eQTL 8.85e-01 -0.0259 0.179 0.051 CD8_TCM L2
ENSG00000136045 PWP1 -859432 sc-eQTL 5.76e-01 -0.116 0.208 0.051 CD8_TCM L2
ENSG00000151135 TMEM263 -129352 sc-eQTL 7.23e-01 0.0724 0.204 0.051 CD8_TCM L2
ENSG00000151136 BTBD11 -492054 sc-eQTL 1.45e-01 0.25 0.171 0.051 CD8_TCM L2
ENSG00000166046 TCP11L2 524438 sc-eQTL 8.35e-01 0.0361 0.172 0.051 CD8_TCM L2
ENSG00000260329 AC007541.1 -129130 sc-eQTL 3.60e-01 -0.171 0.186 0.051 CD8_TCM L2
ENSG00000008405 CRY1 -267182 sc-eQTL 7.36e-01 0.0605 0.179 0.053 CD8_TEM L2
ENSG00000013503 POLR3B 468619 sc-eQTL 9.47e-01 0.0136 0.203 0.053 CD8_TEM L2
ENSG00000110851 PRDM4 -934905 sc-eQTL 9.69e-01 0.00807 0.206 0.053 CD8_TEM L2
ENSG00000111785 RIC8B 51746 sc-eQTL 1.39e-01 0.286 0.193 0.053 CD8_TEM L2
ENSG00000120832 MTERF2 -160793 sc-eQTL 6.01e-01 0.107 0.203 0.053 CD8_TEM L2
ENSG00000136026 CKAP4 522088 sc-eQTL 5.63e-01 0.108 0.187 0.053 CD8_TEM L2
ENSG00000136045 PWP1 -859432 sc-eQTL 2.58e-01 0.224 0.198 0.053 CD8_TEM L2
ENSG00000151135 TMEM263 -129352 sc-eQTL 4.45e-01 0.156 0.204 0.053 CD8_TEM L2
ENSG00000151136 BTBD11 -492054 sc-eQTL 4.79e-01 0.133 0.187 0.053 CD8_TEM L2
ENSG00000166046 TCP11L2 524438 sc-eQTL 8.69e-01 -0.0322 0.195 0.053 CD8_TEM L2
ENSG00000260329 AC007541.1 -129130 sc-eQTL 5.28e-01 0.113 0.18 0.053 CD8_TEM L2
ENSG00000008405 CRY1 -267182 sc-eQTL 5.55e-01 -0.0885 0.15 0.051 NK_CD56bright L2
ENSG00000013503 POLR3B 468619 sc-eQTL 1.32e-01 0.285 0.188 0.051 NK_CD56bright L2
ENSG00000074590 NUAK1 686334 sc-eQTL 5.58e-02 0.315 0.164 0.051 NK_CD56bright L2
ENSG00000110851 PRDM4 -934905 sc-eQTL 9.08e-01 0.0226 0.195 0.051 NK_CD56bright L2
ENSG00000111785 RIC8B 51746 sc-eQTL 8.58e-01 0.0369 0.205 0.051 NK_CD56bright L2
ENSG00000120832 MTERF2 -160793 sc-eQTL 1.98e-01 -0.247 0.192 0.051 NK_CD56bright L2
ENSG00000136026 CKAP4 522088 sc-eQTL 9.05e-01 0.0186 0.155 0.051 NK_CD56bright L2
ENSG00000136045 PWP1 -859432 sc-eQTL 5.15e-01 0.128 0.196 0.051 NK_CD56bright L2
ENSG00000151135 TMEM263 -129352 sc-eQTL 3.30e-01 0.187 0.192 0.051 NK_CD56bright L2
ENSG00000151136 BTBD11 -492054 sc-eQTL 3.77e-01 0.15 0.169 0.051 NK_CD56bright L2
ENSG00000166046 TCP11L2 524438 sc-eQTL 3.38e-01 0.189 0.197 0.051 NK_CD56bright L2
ENSG00000260329 AC007541.1 -129130 sc-eQTL 6.84e-01 -0.0772 0.189 0.051 NK_CD56bright L2
ENSG00000008405 CRY1 -267182 sc-eQTL 9.99e-01 -0.000141 0.138 0.05 Pro_T L2
ENSG00000013503 POLR3B 468619 sc-eQTL 6.72e-01 0.0846 0.2 0.05 Pro_T L2
ENSG00000110851 PRDM4 -934905 sc-eQTL 3.65e-01 0.19 0.209 0.05 Pro_T L2
ENSG00000111785 RIC8B 51746 sc-eQTL 3.05e-01 0.193 0.188 0.05 Pro_T L2
ENSG00000120832 MTERF2 -160793 sc-eQTL 7.78e-02 0.332 0.187 0.05 Pro_T L2
ENSG00000136026 CKAP4 522088 sc-eQTL 4.47e-01 -0.0795 0.104 0.05 Pro_T L2
ENSG00000136045 PWP1 -859432 sc-eQTL 7.43e-01 0.0535 0.163 0.05 Pro_T L2
ENSG00000151135 TMEM263 -129352 sc-eQTL 7.66e-01 0.052 0.174 0.05 Pro_T L2
ENSG00000151136 BTBD11 -492054 sc-eQTL 7.91e-01 0.0464 0.175 0.05 Pro_T L2
ENSG00000166046 TCP11L2 524438 sc-eQTL 1.61e-01 0.226 0.16 0.05 Pro_T L2
ENSG00000260329 AC007541.1 -129130 sc-eQTL 3.76e-01 0.148 0.166 0.05 Pro_T L2
ENSG00000008405 CRY1 -267182 sc-eQTL 7.05e-02 0.337 0.185 0.054 cDC L2
ENSG00000013503 POLR3B 468619 sc-eQTL 2.62e-01 -0.202 0.179 0.054 cDC L2
ENSG00000110851 PRDM4 -934905 sc-eQTL 6.70e-01 -0.0862 0.202 0.054 cDC L2
ENSG00000111785 RIC8B 51746 sc-eQTL 7.93e-01 -0.0499 0.19 0.054 cDC L2
ENSG00000120832 MTERF2 -160793 sc-eQTL 5.60e-01 -0.0954 0.163 0.054 cDC L2
ENSG00000136026 CKAP4 522088 sc-eQTL 1.37e-01 -0.198 0.133 0.054 cDC L2
ENSG00000136045 PWP1 -859432 sc-eQTL 4.88e-01 -0.124 0.179 0.054 cDC L2
ENSG00000151135 TMEM263 -129352 sc-eQTL 7.55e-01 -0.0548 0.175 0.054 cDC L2
ENSG00000151136 BTBD11 -492054 sc-eQTL 2.25e-03 0.498 0.161 0.054 cDC L2
ENSG00000166046 TCP11L2 524438 sc-eQTL 8.62e-01 0.0348 0.199 0.054 cDC L2
ENSG00000008405 CRY1 -267182 sc-eQTL 3.28e-01 -0.201 0.204 0.055 gdT L2
ENSG00000013503 POLR3B 468619 sc-eQTL 6.40e-01 0.101 0.215 0.055 gdT L2
ENSG00000110851 PRDM4 -934905 sc-eQTL 2.25e-01 0.279 0.229 0.055 gdT L2
ENSG00000111785 RIC8B 51746 sc-eQTL 7.40e-01 -0.0725 0.218 0.055 gdT L2
ENSG00000120832 MTERF2 -160793 sc-eQTL 8.73e-01 -0.0375 0.234 0.055 gdT L2
ENSG00000136026 CKAP4 522088 sc-eQTL 1.90e-01 0.269 0.204 0.055 gdT L2
ENSG00000136045 PWP1 -859432 sc-eQTL 5.38e-01 0.147 0.239 0.055 gdT L2
ENSG00000151135 TMEM263 -129352 sc-eQTL 9.54e-01 -0.0125 0.214 0.055 gdT L2
ENSG00000151136 BTBD11 -492054 sc-eQTL 4.78e-01 -0.135 0.189 0.055 gdT L2
ENSG00000166046 TCP11L2 524438 sc-eQTL 5.36e-01 0.138 0.223 0.055 gdT L2
ENSG00000260329 AC007541.1 -129130 sc-eQTL 5.72e-02 -0.403 0.21 0.055 gdT L2
ENSG00000008405 CRY1 -267182 sc-eQTL 3.31e-01 -0.13 0.133 0.052 ncMono L2
ENSG00000013503 POLR3B 468619 sc-eQTL 6.40e-01 -0.0808 0.172 0.052 ncMono L2
ENSG00000110851 PRDM4 -934905 sc-eQTL 8.65e-01 0.0282 0.165 0.052 ncMono L2
ENSG00000111785 RIC8B 51746 sc-eQTL 8.96e-01 0.022 0.167 0.052 ncMono L2
ENSG00000136026 CKAP4 522088 sc-eQTL 5.68e-01 0.102 0.178 0.052 ncMono L2
ENSG00000136045 PWP1 -859432 sc-eQTL 6.14e-01 0.0897 0.178 0.052 ncMono L2
ENSG00000151136 BTBD11 -492054 sc-eQTL 5.39e-01 0.106 0.172 0.052 ncMono L2
ENSG00000166046 TCP11L2 524438 sc-eQTL 6.57e-02 0.322 0.174 0.052 ncMono L2
ENSG00000008405 CRY1 -267182 sc-eQTL 4.31e-01 -0.149 0.189 0.056 pDC L2
ENSG00000013503 POLR3B 468619 sc-eQTL 3.85e-01 0.179 0.206 0.056 pDC L2
ENSG00000110851 PRDM4 -934905 sc-eQTL 9.59e-01 0.0119 0.229 0.056 pDC L2
ENSG00000111785 RIC8B 51746 sc-eQTL 8.90e-01 0.0277 0.199 0.056 pDC L2
ENSG00000120832 MTERF2 -160793 sc-eQTL 1.65e-01 -0.259 0.185 0.056 pDC L2
ENSG00000136026 CKAP4 522088 sc-eQTL 5.33e-01 0.0826 0.132 0.056 pDC L2
ENSG00000136045 PWP1 -859432 sc-eQTL 5.41e-01 0.124 0.202 0.056 pDC L2
ENSG00000151135 TMEM263 -129352 sc-eQTL 1.48e-01 -0.305 0.21 0.056 pDC L2
ENSG00000151136 BTBD11 -492054 sc-eQTL 5.63e-01 0.095 0.164 0.056 pDC L2
ENSG00000166046 TCP11L2 524438 sc-eQTL 6.74e-01 0.0837 0.199 0.056 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000008405 CRY1 -267182 eQTL 0.00041 -0.104 0.0292 0.0 0.0 0.0658
ENSG00000120832 MTERF2 -160793 eQTL 0.000118 -0.178 0.0461 0.0 0.0 0.0658
ENSG00000136026 CKAP4 522088 eQTL 0.0313 0.0437 0.0203 0.0 0.0 0.0658
ENSG00000151136 BTBD11 -492054 eQTL 0.00361 0.136 0.0466 0.0 0.0 0.0658

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000120832 MTERF2 -160793 2.64e-06 2.61e-06 5.55e-07 2.07e-06 8.7e-07 7.53e-07 2.16e-06 9.03e-07 2.27e-06 1.23e-06 2.52e-06 1.57e-06 3.68e-06 1.36e-06 9.27e-07 1.98e-06 1.58e-06 2.15e-06 1.58e-06 1.17e-06 1.4e-06 3.19e-06 2.71e-06 1.6e-06 3.89e-06 1.25e-06 1.42e-06 1.84e-06 2.85e-06 2.45e-06 2e-06 4.71e-07 6.49e-07 1.49e-06 1.51e-06 8.94e-07 8.74e-07 3.97e-07 1.22e-06 3.28e-07 4.72e-07 3.49e-06 5.87e-07 1.74e-07 3.99e-07 3.43e-07 8.74e-07 2.07e-07 2.56e-07
ENSG00000151136 BTBD11 -492054 6.09e-07 3.23e-07 1.05e-07 2.92e-07 9.82e-08 1.57e-07 4.14e-07 1.09e-07 3.17e-07 2.06e-07 4.13e-07 2.98e-07 5.39e-07 1.01e-07 1.45e-07 1.84e-07 1.73e-07 3.39e-07 1.62e-07 9.17e-08 1.91e-07 2.96e-07 2.81e-07 1.23e-07 4.54e-07 2.46e-07 2.23e-07 1.97e-07 2.66e-07 3.52e-07 1.95e-07 7.49e-08 5.68e-08 1.19e-07 2.35e-07 6.73e-08 9.52e-08 7.66e-08 5.62e-08 5.8e-08 4.82e-08 3.06e-07 1.7e-08 1.81e-08 1.1e-07 1.78e-08 7.89e-08 3.35e-09 5.56e-08