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Genes within 1Mb (chr12:106602480:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -491069 sc-eQTL 2.50e-01 -0.22 0.19 0.051 B_Activated L2
ENSG00000013503 POLR3B 244732 sc-eQTL 1.37e-01 -0.279 0.187 0.051 B_Activated L2
ENSG00000111785 RIC8B -172141 sc-eQTL 3.60e-01 -0.175 0.19 0.051 B_Activated L2
ENSG00000120832 MTERF2 -384680 sc-eQTL 6.51e-01 0.0671 0.148 0.051 B_Activated L2
ENSG00000136026 CKAP4 298201 sc-eQTL 9.04e-01 -0.0216 0.179 0.051 B_Activated L2
ENSG00000151135 TMEM263 -353239 sc-eQTL 4.81e-01 0.141 0.199 0.051 B_Activated L2
ENSG00000166046 TCP11L2 300551 sc-eQTL 1.99e-01 0.255 0.198 0.051 B_Activated L2
ENSG00000008405 CRY1 -491069 sc-eQTL 4.44e-01 0.112 0.147 0.052 CD4_CTL L2
ENSG00000013503 POLR3B 244732 sc-eQTL 8.81e-01 0.0267 0.179 0.052 CD4_CTL L2
ENSG00000111785 RIC8B -172141 sc-eQTL 3.61e-01 0.172 0.188 0.052 CD4_CTL L2
ENSG00000120832 MTERF2 -384680 sc-eQTL 9.68e-01 0.00731 0.18 0.052 CD4_CTL L2
ENSG00000136026 CKAP4 298201 sc-eQTL 1.74e-01 -0.2 0.147 0.052 CD4_CTL L2
ENSG00000151135 TMEM263 -353239 sc-eQTL 2.39e-02 -0.429 0.188 0.052 CD4_CTL L2
ENSG00000151136 BTBD11 -715941 sc-eQTL 2.29e-01 -0.18 0.149 0.052 CD4_CTL L2
ENSG00000166046 TCP11L2 300551 sc-eQTL 4.94e-01 -0.127 0.186 0.052 CD4_CTL L2
ENSG00000260329 AC007541.1 -353017 sc-eQTL 3.76e-01 -0.142 0.16 0.052 CD4_CTL L2
ENSG00000008405 CRY1 -491069 sc-eQTL 3.20e-01 0.17 0.171 0.05 CD8_TEM L2
ENSG00000013503 POLR3B 244732 sc-eQTL 6.30e-01 -0.0938 0.194 0.05 CD8_TEM L2
ENSG00000111785 RIC8B -172141 sc-eQTL 3.18e-01 0.185 0.185 0.05 CD8_TEM L2
ENSG00000120832 MTERF2 -384680 sc-eQTL 3.68e-01 -0.175 0.194 0.05 CD8_TEM L2
ENSG00000136026 CKAP4 298201 sc-eQTL 3.53e-01 -0.166 0.178 0.05 CD8_TEM L2
ENSG00000151135 TMEM263 -353239 sc-eQTL 6.66e-01 -0.0846 0.195 0.05 CD8_TEM L2
ENSG00000151136 BTBD11 -715941 sc-eQTL 4.31e-02 -0.361 0.177 0.05 CD8_TEM L2
ENSG00000166046 TCP11L2 300551 sc-eQTL 8.23e-01 -0.0417 0.186 0.05 CD8_TEM L2
ENSG00000260329 AC007541.1 -353017 sc-eQTL 9.09e-01 0.0197 0.172 0.05 CD8_TEM L2
ENSG00000008405 CRY1 -491069 sc-eQTL 4.54e-01 0.116 0.154 0.051 NK_CD56bright L2
ENSG00000013503 POLR3B 244732 sc-eQTL 7.30e-01 -0.0673 0.195 0.051 NK_CD56bright L2
ENSG00000074590 NUAK1 462447 sc-eQTL 7.21e-01 -0.0608 0.17 0.051 NK_CD56bright L2
ENSG00000111785 RIC8B -172141 sc-eQTL 2.24e-01 0.257 0.211 0.051 NK_CD56bright L2
ENSG00000120832 MTERF2 -384680 sc-eQTL 3.52e-01 0.184 0.198 0.051 NK_CD56bright L2
ENSG00000136026 CKAP4 298201 sc-eQTL 4.12e-01 0.131 0.159 0.051 NK_CD56bright L2
ENSG00000151135 TMEM263 -353239 sc-eQTL 5.55e-02 -0.377 0.196 0.051 NK_CD56bright L2
ENSG00000151136 BTBD11 -715941 sc-eQTL 1.42e-01 0.256 0.174 0.051 NK_CD56bright L2
ENSG00000166046 TCP11L2 300551 sc-eQTL 6.34e-02 -0.377 0.202 0.051 NK_CD56bright L2
ENSG00000260329 AC007541.1 -353017 sc-eQTL 7.16e-01 -0.0709 0.195 0.051 NK_CD56bright L2
ENSG00000008405 CRY1 -491069 sc-eQTL 8.09e-01 -0.0497 0.205 0.052 PB L2
ENSG00000013503 POLR3B 244732 sc-eQTL 3.46e-01 -0.208 0.22 0.052 PB L2
ENSG00000111785 RIC8B -172141 sc-eQTL 2.89e-01 0.209 0.196 0.052 PB L2
ENSG00000120832 MTERF2 -384680 sc-eQTL 6.88e-01 0.0747 0.185 0.052 PB L2
ENSG00000136026 CKAP4 298201 sc-eQTL 8.07e-01 0.0303 0.124 0.052 PB L2
ENSG00000151135 TMEM263 -353239 sc-eQTL 4.71e-02 -0.313 0.156 0.052 PB L2
ENSG00000166046 TCP11L2 300551 sc-eQTL 5.15e-01 -0.135 0.207 0.052 PB L2
ENSG00000008405 CRY1 -491069 sc-eQTL 4.49e-01 -0.0984 0.13 0.05 Pro_T L2
ENSG00000013503 POLR3B 244732 sc-eQTL 9.61e-01 -0.00927 0.188 0.05 Pro_T L2
ENSG00000111785 RIC8B -172141 sc-eQTL 1.72e-01 0.241 0.176 0.05 Pro_T L2
ENSG00000120832 MTERF2 -384680 sc-eQTL 6.81e-01 0.0728 0.177 0.05 Pro_T L2
ENSG00000136026 CKAP4 298201 sc-eQTL 1.56e-01 0.139 0.0976 0.05 Pro_T L2
ENSG00000151135 TMEM263 -353239 sc-eQTL 5.06e-01 0.109 0.164 0.05 Pro_T L2
ENSG00000151136 BTBD11 -715941 sc-eQTL 2.85e-01 -0.176 0.164 0.05 Pro_T L2
ENSG00000166046 TCP11L2 300551 sc-eQTL 9.39e-01 0.0115 0.151 0.05 Pro_T L2
ENSG00000260329 AC007541.1 -353017 sc-eQTL 5.66e-01 0.0898 0.156 0.05 Pro_T L2
ENSG00000008405 CRY1 -491069 sc-eQTL 2.92e-01 -0.233 0.22 0.052 gdT L2
ENSG00000013503 POLR3B 244732 sc-eQTL 3.71e-02 -0.481 0.229 0.052 gdT L2
ENSG00000111785 RIC8B -172141 sc-eQTL 2.28e-01 -0.284 0.234 0.052 gdT L2
ENSG00000120832 MTERF2 -384680 sc-eQTL 7.19e-01 0.091 0.253 0.052 gdT L2
ENSG00000136026 CKAP4 298201 sc-eQTL 3.47e-01 -0.208 0.221 0.052 gdT L2
ENSG00000151135 TMEM263 -353239 sc-eQTL 7.18e-01 -0.0836 0.231 0.052 gdT L2
ENSG00000151136 BTBD11 -715941 sc-eQTL 2.58e-01 -0.231 0.204 0.052 gdT L2
ENSG00000166046 TCP11L2 300551 sc-eQTL 9.86e-01 0.00409 0.241 0.052 gdT L2
ENSG00000260329 AC007541.1 -353017 sc-eQTL 7.52e-01 0.0729 0.23 0.052 gdT L2
ENSG00000008405 CRY1 -491069 sc-eQTL 7.72e-01 0.0551 0.19 0.054 pDC L2
ENSG00000013503 POLR3B 244732 sc-eQTL 1.98e-01 0.266 0.206 0.054 pDC L2
ENSG00000111785 RIC8B -172141 sc-eQTL 8.01e-02 -0.348 0.198 0.054 pDC L2
ENSG00000120832 MTERF2 -384680 sc-eQTL 9.83e-01 0.00405 0.187 0.054 pDC L2
ENSG00000136026 CKAP4 298201 sc-eQTL 5.58e-01 -0.0778 0.133 0.054 pDC L2
ENSG00000151135 TMEM263 -353239 sc-eQTL 5.55e-01 -0.125 0.211 0.054 pDC L2
ENSG00000151136 BTBD11 -715941 sc-eQTL 2.67e-01 -0.183 0.164 0.054 pDC L2
ENSG00000166046 TCP11L2 300551 sc-eQTL 8.71e-01 0.0325 0.199 0.054 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000151135 TMEM263 -353239 eQTL 0.0252 -0.0631 0.0282 0.0 0.0 0.0461
ENSG00000166046 TCP11L2 300551 eQTL 0.0365 -0.0723 0.0345 0.0 0.0 0.0461
ENSG00000260329 AC007541.1 -353017 eQTL 0.036 -0.158 0.0753 0.0 0.0 0.0461

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina