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Genes within 1Mb (chr12:106294371:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -799178 sc-eQTL 9.75e-02 -0.0956 0.0575 0.344 B L1
ENSG00000013503 POLR3B -63377 sc-eQTL 7.25e-01 0.0295 0.0838 0.344 B L1
ENSG00000111785 RIC8B -480250 sc-eQTL 6.97e-01 0.026 0.0666 0.344 B L1
ENSG00000120832 MTERF2 -692789 sc-eQTL 4.33e-01 -0.0724 0.0921 0.344 B L1
ENSG00000136026 CKAP4 -9908 sc-eQTL 9.99e-01 5.68e-05 0.0433 0.344 B L1
ENSG00000151135 TMEM263 -661348 sc-eQTL 2.73e-01 -0.071 0.0647 0.344 B L1
ENSG00000166046 TCP11L2 -7558 sc-eQTL 5.34e-01 -0.0324 0.052 0.344 B L1
ENSG00000008405 CRY1 -799178 sc-eQTL 9.39e-01 -0.00293 0.0383 0.344 CD4T L1
ENSG00000013503 POLR3B -63377 sc-eQTL 4.00e-03 -0.174 0.0598 0.344 CD4T L1
ENSG00000111785 RIC8B -480250 sc-eQTL 7.95e-01 0.0156 0.0601 0.344 CD4T L1
ENSG00000120832 MTERF2 -692789 sc-eQTL 4.80e-01 -0.0521 0.0737 0.344 CD4T L1
ENSG00000136026 CKAP4 -9908 sc-eQTL 2.40e-07 -0.261 0.0489 0.344 CD4T L1
ENSG00000151135 TMEM263 -661348 sc-eQTL 1.84e-01 -0.0775 0.0581 0.344 CD4T L1
ENSG00000166046 TCP11L2 -7558 sc-eQTL 2.80e-07 0.264 0.0498 0.344 CD4T L1
ENSG00000260329 AC007541.1 -661126 sc-eQTL 5.40e-01 -0.0518 0.0843 0.344 CD4T L1
ENSG00000008405 CRY1 -799178 sc-eQTL 5.20e-01 -0.0317 0.0493 0.344 CD8T L1
ENSG00000013503 POLR3B -63377 sc-eQTL 7.98e-01 0.0187 0.0731 0.344 CD8T L1
ENSG00000111785 RIC8B -480250 sc-eQTL 9.68e-02 -0.122 0.0731 0.344 CD8T L1
ENSG00000120832 MTERF2 -692789 sc-eQTL 7.54e-01 0.024 0.0763 0.344 CD8T L1
ENSG00000136026 CKAP4 -9908 sc-eQTL 1.28e-01 -0.0735 0.0481 0.344 CD8T L1
ENSG00000151135 TMEM263 -661348 sc-eQTL 9.84e-01 0.00127 0.063 0.344 CD8T L1
ENSG00000166046 TCP11L2 -7558 sc-eQTL 3.19e-01 0.0427 0.0428 0.344 CD8T L1
ENSG00000260329 AC007541.1 -661126 sc-eQTL 9.39e-01 -0.00704 0.0921 0.344 CD8T L1
ENSG00000008405 CRY1 -799178 sc-eQTL 6.96e-01 0.0308 0.0785 0.347 DC L1
ENSG00000013503 POLR3B -63377 sc-eQTL 6.31e-01 0.0403 0.0837 0.347 DC L1
ENSG00000111785 RIC8B -480250 sc-eQTL 1.67e-01 -0.12 0.0863 0.347 DC L1
ENSG00000120832 MTERF2 -692789 sc-eQTL 9.60e-01 -0.00402 0.0806 0.347 DC L1
ENSG00000136026 CKAP4 -9908 sc-eQTL 4.34e-02 -0.116 0.0571 0.347 DC L1
ENSG00000151135 TMEM263 -661348 sc-eQTL 3.04e-01 -0.0826 0.0802 0.347 DC L1
ENSG00000166046 TCP11L2 -7558 sc-eQTL 7.93e-01 0.0228 0.0866 0.347 DC L1
ENSG00000008405 CRY1 -799178 sc-eQTL 8.37e-01 -0.0126 0.0608 0.344 Mono L1
ENSG00000013503 POLR3B -63377 sc-eQTL 7.28e-02 0.131 0.0725 0.344 Mono L1
ENSG00000111785 RIC8B -480250 sc-eQTL 2.26e-01 0.0848 0.0699 0.344 Mono L1
ENSG00000136026 CKAP4 -9908 sc-eQTL 8.32e-03 -0.137 0.0515 0.344 Mono L1
ENSG00000166046 TCP11L2 -7558 sc-eQTL 5.09e-01 0.0402 0.0607 0.344 Mono L1
ENSG00000008405 CRY1 -799178 sc-eQTL 8.02e-01 -0.0111 0.0443 0.345 NK L1
ENSG00000013503 POLR3B -63377 sc-eQTL 8.81e-01 0.0119 0.0794 0.345 NK L1
ENSG00000074590 NUAK1 154338 sc-eQTL 5.42e-01 -0.0477 0.0781 0.345 NK L1
ENSG00000111785 RIC8B -480250 sc-eQTL 1.39e-01 -0.109 0.0736 0.345 NK L1
ENSG00000120832 MTERF2 -692789 sc-eQTL 8.49e-01 -0.0146 0.0762 0.345 NK L1
ENSG00000136026 CKAP4 -9908 sc-eQTL 2.03e-01 -0.0905 0.0708 0.345 NK L1
ENSG00000151135 TMEM263 -661348 sc-eQTL 5.10e-01 -0.0506 0.0766 0.345 NK L1
ENSG00000166046 TCP11L2 -7558 sc-eQTL 3.22e-04 0.23 0.0627 0.345 NK L1
ENSG00000260329 AC007541.1 -661126 sc-eQTL 6.28e-01 -0.0448 0.0924 0.345 NK L1
ENSG00000008405 CRY1 -799178 sc-eQTL 9.35e-01 -0.0039 0.0479 0.344 Other_T L1
ENSG00000013503 POLR3B -63377 sc-eQTL 3.80e-01 -0.0789 0.0896 0.344 Other_T L1
ENSG00000111785 RIC8B -480250 sc-eQTL 9.65e-01 0.00275 0.063 0.344 Other_T L1
ENSG00000120832 MTERF2 -692789 sc-eQTL 3.58e-01 0.0692 0.0751 0.344 Other_T L1
ENSG00000136026 CKAP4 -9908 sc-eQTL 6.96e-01 -0.022 0.0563 0.344 Other_T L1
ENSG00000151135 TMEM263 -661348 sc-eQTL 7.23e-01 -0.0279 0.0786 0.344 Other_T L1
ENSG00000166046 TCP11L2 -7558 sc-eQTL 3.81e-03 0.198 0.0677 0.344 Other_T L1
ENSG00000260329 AC007541.1 -661126 sc-eQTL 7.55e-01 -0.0265 0.0851 0.344 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -799178 sc-eQTL 2.56e-01 0.106 0.0928 0.334 B_Activated L2
ENSG00000013503 POLR3B -63377 sc-eQTL 5.08e-01 0.0607 0.0915 0.334 B_Activated L2
ENSG00000111785 RIC8B -480250 sc-eQTL 3.72e-01 0.0831 0.0928 0.334 B_Activated L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 2.39e-01 -0.0852 0.072 0.334 B_Activated L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 4.88e-01 -0.0605 0.087 0.334 B_Activated L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 7.33e-01 0.0332 0.0972 0.334 B_Activated L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 6.10e-01 -0.0496 0.097 0.334 B_Activated L2
ENSG00000008405 CRY1 -799178 sc-eQTL 1.41e-01 -0.131 0.089 0.343 B_Intermediate L2
ENSG00000013503 POLR3B -63377 sc-eQTL 9.72e-01 0.00351 0.0988 0.343 B_Intermediate L2
ENSG00000111785 RIC8B -480250 sc-eQTL 2.67e-01 0.0972 0.0874 0.343 B_Intermediate L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 2.44e-02 -0.211 0.093 0.343 B_Intermediate L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 8.28e-01 -0.0159 0.0731 0.343 B_Intermediate L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 8.70e-01 0.0153 0.0936 0.343 B_Intermediate L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 3.80e-01 -0.0746 0.0848 0.343 B_Intermediate L2
ENSG00000008405 CRY1 -799178 sc-eQTL 4.15e-01 0.0738 0.0904 0.343 B_Memory L2
ENSG00000013503 POLR3B -63377 sc-eQTL 2.24e-02 -0.217 0.0944 0.343 B_Memory L2
ENSG00000111785 RIC8B -480250 sc-eQTL 9.78e-02 -0.149 0.0894 0.343 B_Memory L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 6.53e-01 -0.0365 0.0811 0.343 B_Memory L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 9.08e-02 -0.136 0.0802 0.343 B_Memory L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 2.37e-01 -0.108 0.0914 0.343 B_Memory L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 8.51e-01 0.0151 0.0804 0.343 B_Memory L2
ENSG00000008405 CRY1 -799178 sc-eQTL 3.98e-01 -0.0653 0.0771 0.344 B_Naive1 L2
ENSG00000013503 POLR3B -63377 sc-eQTL 4.55e-01 0.0648 0.0866 0.344 B_Naive1 L2
ENSG00000111785 RIC8B -480250 sc-eQTL 2.79e-01 0.0918 0.0845 0.344 B_Naive1 L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 4.33e-01 -0.0729 0.0928 0.344 B_Naive1 L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 2.32e-01 -0.0781 0.0651 0.344 B_Naive1 L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 2.87e-01 -0.0979 0.0917 0.344 B_Naive1 L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 6.15e-01 -0.0323 0.0641 0.344 B_Naive1 L2
ENSG00000008405 CRY1 -799178 sc-eQTL 9.00e-01 0.0117 0.0929 0.341 B_Naive2 L2
ENSG00000013503 POLR3B -63377 sc-eQTL 7.38e-01 -0.0313 0.0936 0.341 B_Naive2 L2
ENSG00000111785 RIC8B -480250 sc-eQTL 2.70e-01 -0.0919 0.083 0.341 B_Naive2 L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 4.52e-01 0.0713 0.0945 0.341 B_Naive2 L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 3.98e-01 -0.0687 0.0811 0.341 B_Naive2 L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 6.61e-01 -0.0414 0.0942 0.341 B_Naive2 L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 8.31e-01 -0.0148 0.0693 0.341 B_Naive2 L2
ENSG00000008405 CRY1 -799178 sc-eQTL 3.03e-01 -0.0769 0.0744 0.334 CD4_CTL L2
ENSG00000013503 POLR3B -63377 sc-eQTL 5.20e-01 0.0584 0.0906 0.334 CD4_CTL L2
ENSG00000111785 RIC8B -480250 sc-eQTL 9.57e-01 0.00518 0.0955 0.334 CD4_CTL L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 7.24e-02 0.163 0.0905 0.334 CD4_CTL L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 7.42e-01 -0.0247 0.0749 0.334 CD4_CTL L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 4.62e-01 -0.0714 0.0968 0.334 CD4_CTL L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 3.81e-02 0.195 0.0935 0.334 CD4_CTL L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 9.40e-01 -0.00611 0.0813 0.334 CD4_CTL L2
ENSG00000008405 CRY1 -799178 sc-eQTL 2.18e-01 0.0553 0.0447 0.344 CD4_Naive L2
ENSG00000013503 POLR3B -63377 sc-eQTL 5.94e-02 -0.128 0.0677 0.344 CD4_Naive L2
ENSG00000111785 RIC8B -480250 sc-eQTL 7.14e-01 0.0237 0.0646 0.344 CD4_Naive L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 6.60e-01 -0.0378 0.0858 0.344 CD4_Naive L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 5.33e-06 -0.261 0.0558 0.344 CD4_Naive L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 3.43e-01 -0.0596 0.0627 0.344 CD4_Naive L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 1.27e-07 0.3 0.0549 0.344 CD4_Naive L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 5.32e-01 -0.0554 0.0886 0.344 CD4_Naive L2
ENSG00000008405 CRY1 -799178 sc-eQTL 8.10e-01 0.0135 0.056 0.344 CD4_TCM L2
ENSG00000013503 POLR3B -63377 sc-eQTL 2.35e-01 -0.0914 0.0768 0.344 CD4_TCM L2
ENSG00000111785 RIC8B -480250 sc-eQTL 6.14e-01 -0.0407 0.0805 0.344 CD4_TCM L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 4.63e-02 -0.184 0.0918 0.344 CD4_TCM L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 2.49e-03 -0.17 0.0554 0.344 CD4_TCM L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 1.09e-02 -0.195 0.0759 0.344 CD4_TCM L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 1.62e-03 0.194 0.0608 0.344 CD4_TCM L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 7.51e-01 0.0297 0.0934 0.344 CD4_TCM L2
ENSG00000008405 CRY1 -799178 sc-eQTL 3.18e-01 0.0779 0.0778 0.344 CD4_TEM L2
ENSG00000013503 POLR3B -63377 sc-eQTL 7.23e-02 -0.175 0.0969 0.344 CD4_TEM L2
ENSG00000111785 RIC8B -480250 sc-eQTL 4.96e-01 0.0609 0.0893 0.344 CD4_TEM L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 4.87e-01 -0.0664 0.0954 0.344 CD4_TEM L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 6.54e-03 -0.207 0.0753 0.344 CD4_TEM L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 6.90e-01 0.0352 0.0879 0.344 CD4_TEM L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 5.23e-03 0.212 0.0753 0.344 CD4_TEM L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 7.19e-01 0.0333 0.0923 0.344 CD4_TEM L2
ENSG00000008405 CRY1 -799178 sc-eQTL 7.46e-01 0.0188 0.0581 0.344 CD8_CTL L2
ENSG00000013503 POLR3B -63377 sc-eQTL 5.93e-02 0.164 0.0867 0.344 CD8_CTL L2
ENSG00000111785 RIC8B -480250 sc-eQTL 1.54e-01 -0.117 0.0818 0.344 CD8_CTL L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 4.09e-01 -0.0751 0.0908 0.344 CD8_CTL L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 9.32e-01 -0.00669 0.0779 0.344 CD8_CTL L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 2.52e-02 0.167 0.0742 0.344 CD8_CTL L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 1.29e-03 0.266 0.0816 0.344 CD8_CTL L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 4.50e-01 -0.0701 0.0926 0.344 CD8_CTL L2
ENSG00000008405 CRY1 -799178 sc-eQTL 6.60e-01 0.0301 0.0683 0.344 CD8_Naive L2
ENSG00000013503 POLR3B -63377 sc-eQTL 4.31e-02 -0.167 0.0821 0.344 CD8_Naive L2
ENSG00000111785 RIC8B -480250 sc-eQTL 9.49e-01 0.00567 0.0883 0.344 CD8_Naive L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 4.77e-01 0.0645 0.0905 0.344 CD8_Naive L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 1.38e-01 -0.109 0.0735 0.344 CD8_Naive L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 6.70e-03 -0.212 0.0774 0.344 CD8_Naive L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 4.98e-01 -0.0447 0.066 0.344 CD8_Naive L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 9.42e-01 0.00675 0.0931 0.344 CD8_Naive L2
ENSG00000008405 CRY1 -799178 sc-eQTL 4.92e-02 0.163 0.0825 0.331 CD8_TCM L2
ENSG00000013503 POLR3B -63377 sc-eQTL 3.58e-01 0.0911 0.0989 0.331 CD8_TCM L2
ENSG00000111785 RIC8B -480250 sc-eQTL 3.76e-01 -0.0844 0.095 0.331 CD8_TCM L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 5.06e-01 0.0636 0.0955 0.331 CD8_TCM L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 9.97e-01 0.00034 0.0865 0.331 CD8_TCM L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 2.18e-01 -0.121 0.0984 0.331 CD8_TCM L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 9.19e-01 0.00853 0.0834 0.331 CD8_TCM L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 4.00e-01 0.076 0.0901 0.331 CD8_TCM L2
ENSG00000008405 CRY1 -799178 sc-eQTL 7.14e-01 0.0316 0.0862 0.342 CD8_TEM L2
ENSG00000013503 POLR3B -63377 sc-eQTL 3.51e-01 -0.0913 0.0975 0.342 CD8_TEM L2
ENSG00000111785 RIC8B -480250 sc-eQTL 8.44e-01 -0.0184 0.0934 0.342 CD8_TEM L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 7.16e-01 0.0357 0.098 0.342 CD8_TEM L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 7.80e-01 -0.0251 0.0899 0.342 CD8_TEM L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 2.06e-01 0.124 0.0979 0.342 CD8_TEM L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 9.69e-01 -0.00363 0.0937 0.342 CD8_TEM L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 2.19e-01 -0.106 0.0862 0.342 CD8_TEM L2
ENSG00000008405 CRY1 -799178 sc-eQTL 7.24e-01 -0.0251 0.0711 0.344 MAIT L2
ENSG00000013503 POLR3B -63377 sc-eQTL 1.73e-01 -0.122 0.0893 0.344 MAIT L2
ENSG00000111785 RIC8B -480250 sc-eQTL 8.90e-02 -0.135 0.079 0.344 MAIT L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 3.36e-01 0.0836 0.0868 0.344 MAIT L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 1.91e-01 -0.105 0.0801 0.344 MAIT L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 1.00e-01 -0.154 0.0935 0.344 MAIT L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 5.23e-03 0.227 0.0804 0.344 MAIT L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 3.04e-01 -0.0905 0.0879 0.344 MAIT L2
ENSG00000008405 CRY1 -799178 sc-eQTL 3.59e-01 0.0645 0.0702 0.353 NK_CD56bright L2
ENSG00000013503 POLR3B -63377 sc-eQTL 3.11e-01 0.0901 0.0887 0.353 NK_CD56bright L2
ENSG00000074590 NUAK1 154338 sc-eQTL 1.11e-01 -0.123 0.0772 0.353 NK_CD56bright L2
ENSG00000111785 RIC8B -480250 sc-eQTL 5.66e-01 -0.0554 0.0964 0.353 NK_CD56bright L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 1.91e-01 -0.118 0.09 0.353 NK_CD56bright L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 6.71e-01 0.0309 0.0728 0.353 NK_CD56bright L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 3.25e-01 0.0888 0.09 0.353 NK_CD56bright L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 1.46e-01 0.135 0.0924 0.353 NK_CD56bright L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 2.74e-01 -0.0973 0.0887 0.353 NK_CD56bright L2
ENSG00000008405 CRY1 -799178 sc-eQTL 2.20e-01 -0.0658 0.0535 0.345 NK_CD56dim L2
ENSG00000013503 POLR3B -63377 sc-eQTL 6.97e-01 -0.0314 0.0806 0.345 NK_CD56dim L2
ENSG00000074590 NUAK1 154338 sc-eQTL 8.00e-01 0.02 0.0788 0.345 NK_CD56dim L2
ENSG00000111785 RIC8B -480250 sc-eQTL 6.43e-01 -0.0375 0.0806 0.345 NK_CD56dim L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 8.19e-01 0.0184 0.0801 0.345 NK_CD56dim L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 2.64e-01 -0.0903 0.0807 0.345 NK_CD56dim L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 2.93e-01 -0.0879 0.0833 0.345 NK_CD56dim L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 8.16e-03 0.186 0.0698 0.345 NK_CD56dim L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 7.90e-01 -0.0249 0.0933 0.345 NK_CD56dim L2
ENSG00000008405 CRY1 -799178 sc-eQTL 5.69e-01 0.0433 0.0759 0.352 NK_HLA L2
ENSG00000013503 POLR3B -63377 sc-eQTL 4.10e-01 -0.0758 0.0917 0.352 NK_HLA L2
ENSG00000074590 NUAK1 154338 sc-eQTL 8.02e-01 0.0225 0.0896 0.352 NK_HLA L2
ENSG00000111785 RIC8B -480250 sc-eQTL 4.74e-01 0.0675 0.094 0.352 NK_HLA L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 3.56e-01 0.088 0.0951 0.352 NK_HLA L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 6.08e-01 -0.0425 0.0827 0.352 NK_HLA L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 6.01e-01 -0.0496 0.0948 0.352 NK_HLA L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 6.43e-03 0.252 0.0914 0.352 NK_HLA L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 5.53e-01 0.0519 0.0872 0.352 NK_HLA L2
ENSG00000008405 CRY1 -799178 sc-eQTL 6.33e-01 0.03 0.0629 0.345 NK_cytokine L2
ENSG00000013503 POLR3B -63377 sc-eQTL 9.98e-01 0.000276 0.0902 0.345 NK_cytokine L2
ENSG00000074590 NUAK1 154338 sc-eQTL 8.36e-01 0.0173 0.0833 0.345 NK_cytokine L2
ENSG00000111785 RIC8B -480250 sc-eQTL 1.30e-01 -0.129 0.0851 0.345 NK_cytokine L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 8.33e-01 -0.0185 0.0873 0.345 NK_cytokine L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 3.25e-01 -0.0812 0.0823 0.345 NK_cytokine L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 4.15e-01 -0.0732 0.0896 0.345 NK_cytokine L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 1.21e-02 0.184 0.0727 0.345 NK_cytokine L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 8.36e-01 -0.019 0.0916 0.345 NK_cytokine L2
ENSG00000008405 CRY1 -799178 sc-eQTL 7.24e-01 0.0354 0.1 0.356 PB L2
ENSG00000013503 POLR3B -63377 sc-eQTL 1.78e-01 0.145 0.107 0.356 PB L2
ENSG00000111785 RIC8B -480250 sc-eQTL 1.05e-01 0.155 0.095 0.356 PB L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 6.97e-01 -0.0353 0.0904 0.356 PB L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 2.76e-01 -0.0658 0.0601 0.356 PB L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 9.06e-01 0.00917 0.0773 0.356 PB L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 4.51e-02 0.201 0.0991 0.356 PB L2
ENSG00000008405 CRY1 -799178 sc-eQTL 8.48e-01 -0.0121 0.0628 0.348 Pro_T L2
ENSG00000013503 POLR3B -63377 sc-eQTL 6.75e-01 0.0381 0.0907 0.348 Pro_T L2
ENSG00000111785 RIC8B -480250 sc-eQTL 4.86e-01 0.0595 0.0853 0.348 Pro_T L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 4.56e-01 -0.0638 0.0855 0.348 Pro_T L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 6.89e-01 0.019 0.0474 0.348 Pro_T L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 9.70e-01 -0.00295 0.0792 0.348 Pro_T L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 1.43e-01 0.107 0.0727 0.348 Pro_T L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 7.13e-01 -0.0278 0.0756 0.348 Pro_T L2
ENSG00000008405 CRY1 -799178 sc-eQTL 6.17e-01 -0.039 0.078 0.344 Treg L2
ENSG00000013503 POLR3B -63377 sc-eQTL 8.58e-01 -0.0166 0.0926 0.344 Treg L2
ENSG00000111785 RIC8B -480250 sc-eQTL 1.05e-02 0.225 0.0869 0.344 Treg L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 7.29e-01 0.0332 0.0957 0.344 Treg L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 1.20e-01 -0.106 0.068 0.344 Treg L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 3.03e-02 -0.191 0.0877 0.344 Treg L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 4.55e-02 0.147 0.0731 0.344 Treg L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 3.30e-01 -0.0848 0.0868 0.344 Treg L2
ENSG00000008405 CRY1 -799178 sc-eQTL 5.29e-01 -0.0559 0.0885 0.351 cDC L2
ENSG00000013503 POLR3B -63377 sc-eQTL 1.66e-01 0.118 0.0848 0.351 cDC L2
ENSG00000111785 RIC8B -480250 sc-eQTL 1.47e-01 -0.131 0.0896 0.351 cDC L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 7.02e-01 -0.0296 0.0775 0.351 cDC L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 3.36e-01 -0.0609 0.0632 0.351 cDC L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 4.85e-01 -0.058 0.0829 0.351 cDC L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 3.20e-01 0.094 0.0942 0.351 cDC L2
ENSG00000008405 CRY1 -799178 sc-eQTL 2.12e-01 0.0952 0.0761 0.344 cMono_IL1B L2
ENSG00000013503 POLR3B -63377 sc-eQTL 1.53e-01 0.123 0.0858 0.344 cMono_IL1B L2
ENSG00000111785 RIC8B -480250 sc-eQTL 7.89e-02 0.137 0.0776 0.344 cMono_IL1B L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 1.34e-03 -0.187 0.0577 0.344 cMono_IL1B L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 1.14e-01 0.111 0.0701 0.344 cMono_IL1B L2
ENSG00000008405 CRY1 -799178 sc-eQTL 7.66e-01 -0.0265 0.089 0.344 cMono_S100A L2
ENSG00000013503 POLR3B -63377 sc-eQTL 3.48e-01 -0.0832 0.0886 0.344 cMono_S100A L2
ENSG00000111785 RIC8B -480250 sc-eQTL 1.13e-01 0.13 0.0816 0.344 cMono_S100A L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 1.21e-01 -0.1 0.0645 0.344 cMono_S100A L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 4.73e-01 -0.0547 0.076 0.344 cMono_S100A L2
ENSG00000008405 CRY1 -799178 sc-eQTL 7.10e-01 0.0371 0.0995 0.367 gdT L2
ENSG00000013503 POLR3B -63377 sc-eQTL 2.28e-01 -0.126 0.104 0.367 gdT L2
ENSG00000111785 RIC8B -480250 sc-eQTL 6.11e-01 0.0539 0.106 0.367 gdT L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 9.04e-01 -0.0137 0.114 0.367 gdT L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 4.81e-01 -0.0702 0.0994 0.367 gdT L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 3.95e-01 -0.0885 0.104 0.367 gdT L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 5.64e-01 0.0626 0.108 0.367 gdT L2
ENSG00000260329 AC007541.1 -661126 sc-eQTL 8.88e-01 0.0146 0.103 0.367 gdT L2
ENSG00000008405 CRY1 -799178 sc-eQTL 3.61e-01 -0.0816 0.0891 0.351 intMono L2
ENSG00000013503 POLR3B -63377 sc-eQTL 8.31e-01 -0.0185 0.0867 0.351 intMono L2
ENSG00000111785 RIC8B -480250 sc-eQTL 6.38e-02 -0.157 0.084 0.351 intMono L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 7.98e-02 -0.154 0.0877 0.351 intMono L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 6.66e-01 0.0428 0.099 0.351 intMono L2
ENSG00000008405 CRY1 -799178 sc-eQTL 2.18e-01 -0.0774 0.0626 0.351 ncMono L2
ENSG00000013503 POLR3B -63377 sc-eQTL 1.84e-01 0.107 0.0806 0.351 ncMono L2
ENSG00000111785 RIC8B -480250 sc-eQTL 4.73e-01 0.0564 0.0785 0.351 ncMono L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 1.73e-01 -0.114 0.0834 0.351 ncMono L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 1.20e-01 0.128 0.0819 0.351 ncMono L2
ENSG00000008405 CRY1 -799178 sc-eQTL 8.77e-01 0.0149 0.096 0.347 pDC L2
ENSG00000013503 POLR3B -63377 sc-eQTL 5.92e-01 -0.0562 0.105 0.347 pDC L2
ENSG00000111785 RIC8B -480250 sc-eQTL 4.41e-01 -0.0779 0.101 0.347 pDC L2
ENSG00000120832 MTERF2 -692789 sc-eQTL 9.24e-01 -0.00907 0.0947 0.347 pDC L2
ENSG00000136026 CKAP4 -9908 sc-eQTL 1.94e-01 -0.0871 0.0668 0.347 pDC L2
ENSG00000151135 TMEM263 -661348 sc-eQTL 6.83e-01 -0.0438 0.107 0.347 pDC L2
ENSG00000166046 TCP11L2 -7558 sc-eQTL 7.64e-01 -0.0303 0.101 0.347 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -799178 sc-eQTL 3.43e-01 -0.0768 0.0809 0.344 B_Memory LOneK1K
ENSG00000013503 POLR3B -63377 sc-eQTL 6.05e-01 -0.0484 0.0935 0.344 B_Memory LOneK1K
ENSG00000111785 RIC8B -480250 sc-eQTL 6.21e-01 0.0397 0.0803 0.344 B_Memory LOneK1K
ENSG00000120832 MTERF2 -692789 sc-eQTL 4.80e-02 -0.179 0.0901 0.344 B_Memory LOneK1K
ENSG00000136026 CKAP4 -9908 sc-eQTL 1.83e-01 -0.0842 0.0629 0.344 B_Memory LOneK1K
ENSG00000151135 TMEM263 -661348 sc-eQTL 7.53e-01 0.0279 0.0888 0.344 B_Memory LOneK1K
ENSG00000166046 TCP11L2 -7558 sc-eQTL 1.68e-01 -0.105 0.0762 0.344 B_Memory LOneK1K
ENSG00000008405 CRY1 -799178 sc-eQTL 4.98e-01 -0.0477 0.0702 0.344 B_Naive LOneK1K
ENSG00000013503 POLR3B -63377 sc-eQTL 8.03e-01 0.022 0.0881 0.344 B_Naive LOneK1K
ENSG00000111785 RIC8B -480250 sc-eQTL 9.23e-01 -0.00834 0.0862 0.344 B_Naive LOneK1K
ENSG00000120832 MTERF2 -692789 sc-eQTL 6.80e-01 -0.0389 0.0942 0.344 B_Naive LOneK1K
ENSG00000136026 CKAP4 -9908 sc-eQTL 2.04e-01 -0.0833 0.0653 0.344 B_Naive LOneK1K
ENSG00000151135 TMEM263 -661348 sc-eQTL 2.55e-01 -0.101 0.0886 0.344 B_Naive LOneK1K
ENSG00000166046 TCP11L2 -7558 sc-eQTL 3.61e-01 -0.0523 0.0571 0.344 B_Naive LOneK1K
ENSG00000008405 CRY1 -799178 sc-eQTL 2.87e-01 0.0785 0.0735 0.344 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -63377 sc-eQTL 2.87e-01 0.0868 0.0814 0.344 CD14_Mono LOneK1K
ENSG00000111785 RIC8B -480250 sc-eQTL 7.60e-02 0.134 0.075 0.344 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 -9908 sc-eQTL 3.79e-03 -0.163 0.0556 0.344 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 -7558 sc-eQTL 4.39e-01 0.0467 0.0603 0.344 CD14_Mono LOneK1K
ENSG00000008405 CRY1 -799178 sc-eQTL 4.23e-01 -0.0513 0.0639 0.347 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -63377 sc-eQTL 1.51e-01 0.112 0.0774 0.347 CD16_Mono LOneK1K
ENSG00000111785 RIC8B -480250 sc-eQTL 6.77e-01 -0.0309 0.0741 0.347 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 -9908 sc-eQTL 6.71e-02 -0.14 0.0762 0.347 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 -7558 sc-eQTL 2.61e-01 0.0894 0.0793 0.347 CD16_Mono LOneK1K
ENSG00000008405 CRY1 -799178 sc-eQTL 6.13e-01 -0.0228 0.0451 0.345 NK_CD56dim LOneK1K
ENSG00000013503 POLR3B -63377 sc-eQTL 5.92e-01 -0.044 0.0818 0.345 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 154338 sc-eQTL 6.35e-01 -0.0375 0.0787 0.345 NK_CD56dim LOneK1K
ENSG00000111785 RIC8B -480250 sc-eQTL 2.17e-01 -0.0931 0.0752 0.345 NK_CD56dim LOneK1K
ENSG00000120832 MTERF2 -692789 sc-eQTL 9.83e-01 0.00169 0.0783 0.345 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 -9908 sc-eQTL 9.73e-02 -0.124 0.0744 0.345 NK_CD56dim LOneK1K
ENSG00000151135 TMEM263 -661348 sc-eQTL 4.82e-01 -0.0558 0.0792 0.345 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 -7558 sc-eQTL 1.57e-04 0.238 0.0619 0.345 NK_CD56dim LOneK1K
ENSG00000260329 AC007541.1 -661126 sc-eQTL 5.05e-01 -0.0618 0.0924 0.345 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000013503 POLR3B -63377 eQTL 1.44e-04 -0.113 0.0297 0.0 0.0 0.332
ENSG00000074590 NUAK1 154338 eQTL 0.00272 -0.0988 0.0329 0.0064 0.0 0.332
ENSG00000136026 CKAP4 -9908 eQTL 0.00027 -0.0417 0.0114 0.00121 0.0 0.332
ENSG00000166046 TCP11L2 -7558 eQTL 4.2499999999999996e-48 0.224 0.0145 0.0 0.00469 0.332

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000013503 POLR3B -63377 1.08e-05 1.27e-05 1.28e-06 6.7e-06 2.25e-06 5.08e-06 1.19e-05 2.19e-06 1.05e-05 5.35e-06 1.36e-05 5.64e-06 1.8e-05 3.66e-06 2.96e-06 6.58e-06 5.45e-06 7.92e-06 2.65e-06 2.85e-06 5.14e-06 1.02e-05 8.1e-06 3.3e-06 1.49e-05 3.81e-06 5.04e-06 4.45e-06 1.1e-05 8.95e-06 6.58e-06 9.62e-07 1.22e-06 2.85e-06 4.89e-06 2.43e-06 1.73e-06 1.84e-06 2.19e-06 9.82e-07 8.6e-07 1.3e-05 1.4e-06 1.47e-07 7.04e-07 1.63e-06 1.26e-06 8.28e-07 4.4e-07
ENSG00000074590 NUAK1 154338 4.68e-06 4.98e-06 6.94e-07 2.96e-06 6.04e-07 1.35e-06 3.02e-06 9.82e-07 3.9e-06 1.83e-06 4.1e-06 2.52e-06 7.25e-06 1.9e-06 1.4e-06 2.08e-06 2.04e-06 2.78e-06 1.39e-06 9.69e-07 1.99e-06 4.07e-06 3.24e-06 1.8e-06 4.77e-06 1.21e-06 1.8e-06 1.48e-06 3.81e-06 3.6e-06 2.12e-06 5.43e-07 7.93e-07 1.42e-06 2.03e-06 9.09e-07 9.24e-07 4.93e-07 1.08e-06 4.11e-07 1.67e-07 4.74e-06 3.96e-07 1.6e-07 3.69e-07 3.52e-07 8.68e-07 2.11e-07 3.38e-07
ENSG00000136026 CKAP4 -9908 3.44e-05 3.18e-05 5.99e-06 1.53e-05 5.6e-06 1.39e-05 4.36e-05 4.37e-06 2.98e-05 1.52e-05 3.69e-05 1.63e-05 4.7e-05 1.35e-05 6.78e-06 1.77e-05 1.63e-05 2.42e-05 7.62e-06 6.57e-06 1.42e-05 3.17e-05 3.06e-05 8.66e-06 4.24e-05 7.68e-06 1.33e-05 1.24e-05 3.11e-05 2.47e-05 1.95e-05 1.61e-06 2.53e-06 6.79e-06 1.12e-05 5.68e-06 3.09e-06 3.17e-06 4.54e-06 3.3e-06 1.72e-06 3.65e-05 3.46e-06 3.62e-07 2.39e-06 3.72e-06 4.04e-06 1.56e-06 1.52e-06
ENSG00000166046 TCP11L2 -7558 3.63e-05 3.3e-05 6.31e-06 1.55e-05 5.98e-06 1.45e-05 4.55e-05 4.59e-06 3.16e-05 1.58e-05 3.9e-05 1.77e-05 4.89e-05 1.42e-05 7.05e-06 1.92e-05 1.77e-05 2.54e-05 7.94e-06 6.77e-06 1.54e-05 3.37e-05 3.24e-05 9.15e-06 4.49e-05 8.02e-06 1.44e-05 1.29e-05 3.26e-05 2.59e-05 2.03e-05 1.64e-06 2.62e-06 7.07e-06 1.17e-05 5.85e-06 3.16e-06 3.11e-06 4.8e-06 3.35e-06 1.74e-06 3.81e-05 3.55e-06 3.66e-07 2.55e-06 3.93e-06 4.08e-06 1.57e-06 1.52e-06