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Genes within 1Mb (chr12:106259956:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -833593 sc-eQTL 5.14e-01 0.0578 0.0883 0.893 B L1
ENSG00000013503 POLR3B -97792 sc-eQTL 3.39e-01 0.122 0.128 0.893 B L1
ENSG00000111785 RIC8B -514665 sc-eQTL 8.47e-01 -0.0197 0.102 0.893 B L1
ENSG00000120832 MTERF2 -727204 sc-eQTL 6.76e-01 0.0589 0.141 0.893 B L1
ENSG00000136026 CKAP4 -44323 sc-eQTL 8.29e-01 -0.0143 0.0663 0.893 B L1
ENSG00000151135 TMEM263 -695763 sc-eQTL 9.77e-01 -0.00289 0.0991 0.893 B L1
ENSG00000166046 TCP11L2 -41973 sc-eQTL 4.07e-01 -0.066 0.0794 0.893 B L1
ENSG00000008405 CRY1 -833593 sc-eQTL 1.95e-01 -0.0764 0.0587 0.893 CD4T L1
ENSG00000013503 POLR3B -97792 sc-eQTL 3.06e-01 0.0961 0.0936 0.893 CD4T L1
ENSG00000111785 RIC8B -514665 sc-eQTL 3.30e-01 0.0901 0.0923 0.893 CD4T L1
ENSG00000120832 MTERF2 -727204 sc-eQTL 2.10e-01 -0.142 0.113 0.893 CD4T L1
ENSG00000136026 CKAP4 -44323 sc-eQTL 4.19e-01 0.0648 0.0801 0.893 CD4T L1
ENSG00000151135 TMEM263 -695763 sc-eQTL 9.15e-01 -0.00962 0.0898 0.893 CD4T L1
ENSG00000166046 TCP11L2 -41973 sc-eQTL 2.37e-01 -0.0965 0.0813 0.893 CD4T L1
ENSG00000260329 AC007541.1 -695541 sc-eQTL 4.29e-01 -0.103 0.13 0.893 CD4T L1
ENSG00000008405 CRY1 -833593 sc-eQTL 4.10e-01 0.062 0.0751 0.893 CD8T L1
ENSG00000013503 POLR3B -97792 sc-eQTL 2.36e-01 0.132 0.111 0.893 CD8T L1
ENSG00000111785 RIC8B -514665 sc-eQTL 6.76e-01 -0.0469 0.112 0.893 CD8T L1
ENSG00000120832 MTERF2 -727204 sc-eQTL 6.19e-01 -0.0578 0.116 0.893 CD8T L1
ENSG00000136026 CKAP4 -44323 sc-eQTL 1.15e-01 0.116 0.0732 0.893 CD8T L1
ENSG00000151135 TMEM263 -695763 sc-eQTL 3.01e-01 0.0992 0.0957 0.893 CD8T L1
ENSG00000166046 TCP11L2 -41973 sc-eQTL 7.36e-02 -0.117 0.0649 0.893 CD8T L1
ENSG00000260329 AC007541.1 -695541 sc-eQTL 2.78e-01 0.152 0.14 0.893 CD8T L1
ENSG00000008405 CRY1 -833593 sc-eQTL 5.11e-01 0.0802 0.122 0.892 DC L1
ENSG00000013503 POLR3B -97792 sc-eQTL 6.77e-01 0.0542 0.13 0.892 DC L1
ENSG00000111785 RIC8B -514665 sc-eQTL 8.17e-01 0.0311 0.134 0.892 DC L1
ENSG00000120832 MTERF2 -727204 sc-eQTL 7.06e-02 0.225 0.124 0.892 DC L1
ENSG00000136026 CKAP4 -44323 sc-eQTL 3.66e-01 -0.0808 0.0892 0.892 DC L1
ENSG00000151135 TMEM263 -695763 sc-eQTL 3.26e-02 0.265 0.123 0.892 DC L1
ENSG00000166046 TCP11L2 -41973 sc-eQTL 9.22e-01 0.0131 0.134 0.892 DC L1
ENSG00000008405 CRY1 -833593 sc-eQTL 7.22e-01 0.0336 0.0944 0.893 Mono L1
ENSG00000013503 POLR3B -97792 sc-eQTL 1.59e-01 -0.16 0.113 0.893 Mono L1
ENSG00000111785 RIC8B -514665 sc-eQTL 9.15e-01 -0.0117 0.109 0.893 Mono L1
ENSG00000136026 CKAP4 -44323 sc-eQTL 7.45e-01 0.0265 0.0813 0.893 Mono L1
ENSG00000166046 TCP11L2 -41973 sc-eQTL 1.40e-01 -0.139 0.0939 0.893 Mono L1
ENSG00000008405 CRY1 -833593 sc-eQTL 8.49e-01 0.0131 0.0686 0.895 NK L1
ENSG00000013503 POLR3B -97792 sc-eQTL 8.93e-01 -0.0165 0.123 0.895 NK L1
ENSG00000074590 NUAK1 119923 sc-eQTL 9.38e-01 -0.00942 0.121 0.895 NK L1
ENSG00000111785 RIC8B -514665 sc-eQTL 3.64e-01 0.104 0.114 0.895 NK L1
ENSG00000120832 MTERF2 -727204 sc-eQTL 1.23e-01 0.181 0.117 0.895 NK L1
ENSG00000136026 CKAP4 -44323 sc-eQTL 9.97e-01 0.000395 0.11 0.895 NK L1
ENSG00000151135 TMEM263 -695763 sc-eQTL 3.93e-01 -0.102 0.119 0.895 NK L1
ENSG00000166046 TCP11L2 -41973 sc-eQTL 5.97e-01 -0.053 0.1 0.895 NK L1
ENSG00000260329 AC007541.1 -695541 sc-eQTL 6.31e-01 -0.0688 0.143 0.895 NK L1
ENSG00000008405 CRY1 -833593 sc-eQTL 8.92e-01 0.00994 0.073 0.893 Other_T L1
ENSG00000013503 POLR3B -97792 sc-eQTL 8.37e-02 -0.236 0.136 0.893 Other_T L1
ENSG00000111785 RIC8B -514665 sc-eQTL 4.98e-01 0.065 0.0957 0.893 Other_T L1
ENSG00000120832 MTERF2 -727204 sc-eQTL 9.62e-01 0.00548 0.115 0.893 Other_T L1
ENSG00000136026 CKAP4 -44323 sc-eQTL 9.94e-02 -0.141 0.0851 0.893 Other_T L1
ENSG00000151135 TMEM263 -695763 sc-eQTL 1.15e-01 0.188 0.119 0.893 Other_T L1
ENSG00000166046 TCP11L2 -41973 sc-eQTL 9.85e-01 0.00197 0.105 0.893 Other_T L1
ENSG00000260329 AC007541.1 -695541 sc-eQTL 7.44e-01 -0.0424 0.129 0.893 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -833593 sc-eQTL 5.87e-01 -0.0789 0.145 0.895 B_Activated L2
ENSG00000013503 POLR3B -97792 sc-eQTL 1.44e-01 0.208 0.142 0.895 B_Activated L2
ENSG00000111785 RIC8B -514665 sc-eQTL 3.10e-01 -0.147 0.145 0.895 B_Activated L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 6.56e-01 -0.0503 0.113 0.895 B_Activated L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 5.19e-01 0.0877 0.136 0.895 B_Activated L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 8.18e-01 -0.0349 0.151 0.895 B_Activated L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 2.67e-01 0.168 0.151 0.895 B_Activated L2
ENSG00000008405 CRY1 -833593 sc-eQTL 8.14e-02 0.23 0.132 0.895 B_Intermediate L2
ENSG00000013503 POLR3B -97792 sc-eQTL 9.79e-01 0.00383 0.146 0.895 B_Intermediate L2
ENSG00000111785 RIC8B -514665 sc-eQTL 6.23e-01 0.064 0.13 0.895 B_Intermediate L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 7.44e-01 -0.0456 0.139 0.895 B_Intermediate L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 5.45e-01 -0.0657 0.108 0.895 B_Intermediate L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 9.33e-01 0.0117 0.139 0.895 B_Intermediate L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 9.17e-01 0.0131 0.126 0.895 B_Intermediate L2
ENSG00000008405 CRY1 -833593 sc-eQTL 8.79e-01 -0.0208 0.137 0.892 B_Memory L2
ENSG00000013503 POLR3B -97792 sc-eQTL 2.91e-01 0.152 0.144 0.892 B_Memory L2
ENSG00000111785 RIC8B -514665 sc-eQTL 3.89e-01 -0.117 0.135 0.892 B_Memory L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 5.61e-01 -0.0712 0.122 0.892 B_Memory L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 4.08e-01 -0.101 0.122 0.892 B_Memory L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 1.59e-01 0.195 0.138 0.892 B_Memory L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 6.15e-01 -0.0612 0.121 0.892 B_Memory L2
ENSG00000008405 CRY1 -833593 sc-eQTL 6.58e-01 0.0529 0.119 0.893 B_Naive1 L2
ENSG00000013503 POLR3B -97792 sc-eQTL 4.68e-01 -0.0974 0.134 0.893 B_Naive1 L2
ENSG00000111785 RIC8B -514665 sc-eQTL 3.49e-01 0.123 0.131 0.893 B_Naive1 L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 3.62e-01 0.131 0.144 0.893 B_Naive1 L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 7.93e-01 -0.0266 0.101 0.893 B_Naive1 L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 8.47e-01 -0.0275 0.142 0.893 B_Naive1 L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 9.94e-01 0.000797 0.0993 0.893 B_Naive1 L2
ENSG00000008405 CRY1 -833593 sc-eQTL 8.43e-01 -0.0285 0.143 0.893 B_Naive2 L2
ENSG00000013503 POLR3B -97792 sc-eQTL 3.71e-01 0.129 0.144 0.893 B_Naive2 L2
ENSG00000111785 RIC8B -514665 sc-eQTL 6.65e-01 0.0557 0.129 0.893 B_Naive2 L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 4.07e-01 0.121 0.146 0.893 B_Naive2 L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 8.97e-01 0.0163 0.125 0.893 B_Naive2 L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 9.24e-01 -0.0139 0.146 0.893 B_Naive2 L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 1.21e-01 -0.166 0.106 0.893 B_Naive2 L2
ENSG00000008405 CRY1 -833593 sc-eQTL 1.76e-01 -0.149 0.11 0.889 CD4_CTL L2
ENSG00000013503 POLR3B -97792 sc-eQTL 1.86e-01 -0.177 0.134 0.889 CD4_CTL L2
ENSG00000111785 RIC8B -514665 sc-eQTL 9.68e-01 0.00569 0.141 0.889 CD4_CTL L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 3.47e-01 -0.127 0.135 0.889 CD4_CTL L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 6.63e-01 -0.0483 0.111 0.889 CD4_CTL L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 4.88e-01 -0.0994 0.143 0.889 CD4_CTL L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 9.85e-01 -0.00262 0.14 0.889 CD4_CTL L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 3.09e-01 -0.122 0.12 0.889 CD4_CTL L2
ENSG00000008405 CRY1 -833593 sc-eQTL 2.43e-01 -0.081 0.0692 0.893 CD4_Naive L2
ENSG00000013503 POLR3B -97792 sc-eQTL 3.02e-01 0.109 0.105 0.893 CD4_Naive L2
ENSG00000111785 RIC8B -514665 sc-eQTL 3.79e-01 0.0879 0.0996 0.893 CD4_Naive L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 8.95e-02 -0.225 0.132 0.893 CD4_Naive L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 6.51e-01 0.041 0.0905 0.893 CD4_Naive L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 9.74e-01 0.00321 0.0971 0.893 CD4_Naive L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 1.60e-01 -0.127 0.0903 0.893 CD4_Naive L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 6.07e-01 -0.0705 0.137 0.893 CD4_Naive L2
ENSG00000008405 CRY1 -833593 sc-eQTL 3.92e-01 -0.0741 0.0865 0.893 CD4_TCM L2
ENSG00000013503 POLR3B -97792 sc-eQTL 9.75e-01 -0.0038 0.119 0.893 CD4_TCM L2
ENSG00000111785 RIC8B -514665 sc-eQTL 9.12e-01 0.0138 0.125 0.893 CD4_TCM L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 9.21e-01 0.0142 0.143 0.893 CD4_TCM L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 5.15e-01 0.057 0.0875 0.893 CD4_TCM L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 9.31e-01 0.0103 0.119 0.893 CD4_TCM L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 2.75e-01 -0.105 0.0961 0.893 CD4_TCM L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 9.88e-01 -0.00223 0.144 0.893 CD4_TCM L2
ENSG00000008405 CRY1 -833593 sc-eQTL 8.96e-01 0.0153 0.117 0.893 CD4_TEM L2
ENSG00000013503 POLR3B -97792 sc-eQTL 4.96e-01 0.1 0.146 0.893 CD4_TEM L2
ENSG00000111785 RIC8B -514665 sc-eQTL 6.58e-01 -0.0594 0.134 0.893 CD4_TEM L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 6.44e-01 -0.0664 0.143 0.893 CD4_TEM L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 1.07e-01 0.185 0.114 0.893 CD4_TEM L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 4.24e-01 0.106 0.132 0.893 CD4_TEM L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 7.70e-01 -0.0337 0.115 0.893 CD4_TEM L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 4.66e-01 -0.101 0.138 0.893 CD4_TEM L2
ENSG00000008405 CRY1 -833593 sc-eQTL 7.15e-01 -0.0326 0.0892 0.893 CD8_CTL L2
ENSG00000013503 POLR3B -97792 sc-eQTL 5.99e-01 0.0707 0.134 0.893 CD8_CTL L2
ENSG00000111785 RIC8B -514665 sc-eQTL 8.59e-01 -0.0224 0.126 0.893 CD8_CTL L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 2.56e-01 -0.159 0.139 0.893 CD8_CTL L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 6.37e-01 0.0564 0.119 0.893 CD8_CTL L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 3.35e-01 -0.111 0.115 0.893 CD8_CTL L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 1.05e-01 -0.207 0.127 0.893 CD8_CTL L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 2.92e-01 0.15 0.142 0.893 CD8_CTL L2
ENSG00000008405 CRY1 -833593 sc-eQTL 9.41e-01 0.00766 0.103 0.893 CD8_Naive L2
ENSG00000013503 POLR3B -97792 sc-eQTL 1.71e-01 0.17 0.124 0.893 CD8_Naive L2
ENSG00000111785 RIC8B -514665 sc-eQTL 3.61e-01 -0.121 0.133 0.893 CD8_Naive L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 5.43e-01 0.0829 0.136 0.893 CD8_Naive L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 1.61e-01 0.156 0.111 0.893 CD8_Naive L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 3.24e-01 0.117 0.118 0.893 CD8_Naive L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 2.73e-01 -0.109 0.099 0.893 CD8_Naive L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 9.42e-01 0.0101 0.14 0.893 CD8_Naive L2
ENSG00000008405 CRY1 -833593 sc-eQTL 7.81e-01 0.0332 0.119 0.889 CD8_TCM L2
ENSG00000013503 POLR3B -97792 sc-eQTL 3.59e-01 -0.13 0.142 0.889 CD8_TCM L2
ENSG00000111785 RIC8B -514665 sc-eQTL 6.31e-01 0.0655 0.136 0.889 CD8_TCM L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 7.39e-01 0.0457 0.137 0.889 CD8_TCM L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 8.96e-01 -0.0161 0.124 0.889 CD8_TCM L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 4.89e-01 -0.0978 0.141 0.889 CD8_TCM L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 7.23e-01 -0.0423 0.119 0.889 CD8_TCM L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 7.87e-01 0.035 0.129 0.889 CD8_TCM L2
ENSG00000008405 CRY1 -833593 sc-eQTL 4.66e-01 -0.0923 0.126 0.89 CD8_TEM L2
ENSG00000013503 POLR3B -97792 sc-eQTL 7.87e-01 -0.0387 0.143 0.89 CD8_TEM L2
ENSG00000111785 RIC8B -514665 sc-eQTL 5.51e-01 0.0817 0.137 0.89 CD8_TEM L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 7.57e-01 0.0444 0.144 0.89 CD8_TEM L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 6.98e-01 -0.0512 0.132 0.89 CD8_TEM L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 4.29e-01 -0.114 0.144 0.89 CD8_TEM L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 8.71e-01 0.0224 0.137 0.89 CD8_TEM L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 1.51e-01 0.182 0.126 0.89 CD8_TEM L2
ENSG00000008405 CRY1 -833593 sc-eQTL 9.32e-01 0.00909 0.107 0.892 MAIT L2
ENSG00000013503 POLR3B -97792 sc-eQTL 5.10e-02 -0.262 0.134 0.892 MAIT L2
ENSG00000111785 RIC8B -514665 sc-eQTL 3.87e-01 0.104 0.12 0.892 MAIT L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 7.26e-01 -0.0459 0.131 0.892 MAIT L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 6.91e-01 -0.0482 0.121 0.892 MAIT L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 8.47e-02 0.244 0.141 0.892 MAIT L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 9.99e-01 -0.000182 0.123 0.892 MAIT L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 8.37e-01 -0.0274 0.133 0.892 MAIT L2
ENSG00000008405 CRY1 -833593 sc-eQTL 7.76e-01 0.0302 0.106 0.891 NK_CD56bright L2
ENSG00000013503 POLR3B -97792 sc-eQTL 1.54e-01 -0.191 0.134 0.891 NK_CD56bright L2
ENSG00000074590 NUAK1 119923 sc-eQTL 7.42e-01 -0.0387 0.117 0.891 NK_CD56bright L2
ENSG00000111785 RIC8B -514665 sc-eQTL 5.20e-01 0.0937 0.146 0.891 NK_CD56bright L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 4.08e-01 0.113 0.136 0.891 NK_CD56bright L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 6.23e-02 0.204 0.109 0.891 NK_CD56bright L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 4.63e-01 -0.1 0.136 0.891 NK_CD56bright L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 7.30e-01 0.0485 0.14 0.891 NK_CD56bright L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 3.91e-01 -0.115 0.134 0.891 NK_CD56bright L2
ENSG00000008405 CRY1 -833593 sc-eQTL 3.97e-01 0.07 0.0825 0.894 NK_CD56dim L2
ENSG00000013503 POLR3B -97792 sc-eQTL 6.67e-01 0.0535 0.124 0.894 NK_CD56dim L2
ENSG00000074590 NUAK1 119923 sc-eQTL 9.74e-01 0.004 0.121 0.894 NK_CD56dim L2
ENSG00000111785 RIC8B -514665 sc-eQTL 7.87e-01 0.0336 0.124 0.894 NK_CD56dim L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 2.75e-01 0.135 0.123 0.894 NK_CD56dim L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 7.81e-01 0.0347 0.125 0.894 NK_CD56dim L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 5.74e-01 -0.0724 0.129 0.894 NK_CD56dim L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 8.84e-01 0.016 0.109 0.894 NK_CD56dim L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 2.71e-01 -0.158 0.143 0.894 NK_CD56dim L2
ENSG00000008405 CRY1 -833593 sc-eQTL 3.31e-01 0.11 0.113 0.89 NK_HLA L2
ENSG00000013503 POLR3B -97792 sc-eQTL 4.30e-01 -0.108 0.137 0.89 NK_HLA L2
ENSG00000074590 NUAK1 119923 sc-eQTL 7.13e-01 0.0494 0.134 0.89 NK_HLA L2
ENSG00000111785 RIC8B -514665 sc-eQTL 9.53e-01 0.00838 0.141 0.89 NK_HLA L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 6.94e-01 0.056 0.142 0.89 NK_HLA L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 4.63e-02 -0.245 0.122 0.89 NK_HLA L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 5.40e-01 -0.0868 0.141 0.89 NK_HLA L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 6.11e-01 -0.0709 0.139 0.89 NK_HLA L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 4.05e-01 0.109 0.13 0.89 NK_HLA L2
ENSG00000008405 CRY1 -833593 sc-eQTL 4.05e-01 0.0806 0.0967 0.894 NK_cytokine L2
ENSG00000013503 POLR3B -97792 sc-eQTL 8.60e-01 0.0245 0.139 0.894 NK_cytokine L2
ENSG00000074590 NUAK1 119923 sc-eQTL 5.07e-01 -0.0852 0.128 0.894 NK_cytokine L2
ENSG00000111785 RIC8B -514665 sc-eQTL 4.11e-01 0.108 0.131 0.894 NK_cytokine L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 3.33e-01 0.13 0.134 0.894 NK_cytokine L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 8.40e-01 0.0257 0.127 0.894 NK_cytokine L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 7.11e-01 -0.0512 0.138 0.894 NK_cytokine L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 5.05e-01 -0.0758 0.114 0.894 NK_cytokine L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 7.70e-01 0.0412 0.141 0.894 NK_cytokine L2
ENSG00000008405 CRY1 -833593 sc-eQTL 6.94e-01 0.0728 0.185 0.904 PB L2
ENSG00000013503 POLR3B -97792 sc-eQTL 6.75e-02 -0.362 0.196 0.904 PB L2
ENSG00000111785 RIC8B -514665 sc-eQTL 9.15e-01 -0.0191 0.178 0.904 PB L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 5.01e-02 -0.325 0.164 0.904 PB L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 2.05e-02 -0.256 0.109 0.904 PB L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 8.14e-01 0.0337 0.143 0.904 PB L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 6.18e-01 0.0932 0.186 0.904 PB L2
ENSG00000008405 CRY1 -833593 sc-eQTL 4.76e-01 0.0695 0.0974 0.891 Pro_T L2
ENSG00000013503 POLR3B -97792 sc-eQTL 5.76e-01 0.0789 0.141 0.891 Pro_T L2
ENSG00000111785 RIC8B -514665 sc-eQTL 5.23e-02 0.257 0.131 0.891 Pro_T L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 5.28e-01 0.084 0.133 0.891 Pro_T L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 7.47e-01 0.0238 0.0737 0.891 Pro_T L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 8.58e-01 0.022 0.123 0.891 Pro_T L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 4.70e-01 -0.0821 0.113 0.891 Pro_T L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 4.64e-01 -0.0861 0.117 0.891 Pro_T L2
ENSG00000008405 CRY1 -833593 sc-eQTL 5.73e-01 -0.0672 0.119 0.893 Treg L2
ENSG00000013503 POLR3B -97792 sc-eQTL 8.24e-01 -0.0316 0.141 0.893 Treg L2
ENSG00000111785 RIC8B -514665 sc-eQTL 3.23e-01 0.133 0.135 0.893 Treg L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 3.04e-01 -0.15 0.146 0.893 Treg L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 4.67e-01 0.076 0.104 0.893 Treg L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 4.23e-01 -0.108 0.135 0.893 Treg L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 6.38e-02 -0.208 0.112 0.893 Treg L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 6.89e-01 0.0533 0.133 0.893 Treg L2
ENSG00000008405 CRY1 -833593 sc-eQTL 8.90e-01 0.0192 0.138 0.89 cDC L2
ENSG00000013503 POLR3B -97792 sc-eQTL 9.56e-02 0.221 0.132 0.89 cDC L2
ENSG00000111785 RIC8B -514665 sc-eQTL 6.78e-01 -0.0584 0.14 0.89 cDC L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 3.11e-01 0.123 0.121 0.89 cDC L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 7.03e-01 0.0377 0.0988 0.89 cDC L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 4.33e-01 0.102 0.129 0.89 cDC L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 8.63e-01 -0.0254 0.147 0.89 cDC L2
ENSG00000008405 CRY1 -833593 sc-eQTL 9.85e-01 0.00234 0.12 0.893 cMono_IL1B L2
ENSG00000013503 POLR3B -97792 sc-eQTL 8.98e-01 -0.0175 0.136 0.893 cMono_IL1B L2
ENSG00000111785 RIC8B -514665 sc-eQTL 3.99e-01 -0.104 0.123 0.893 cMono_IL1B L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 6.38e-01 0.044 0.0932 0.893 cMono_IL1B L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 5.59e-01 -0.0651 0.111 0.893 cMono_IL1B L2
ENSG00000008405 CRY1 -833593 sc-eQTL 3.99e-01 -0.119 0.141 0.893 cMono_S100A L2
ENSG00000013503 POLR3B -97792 sc-eQTL 2.01e-02 -0.326 0.139 0.893 cMono_S100A L2
ENSG00000111785 RIC8B -514665 sc-eQTL 6.95e-01 0.0512 0.13 0.893 cMono_S100A L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 8.20e-01 -0.0235 0.103 0.893 cMono_S100A L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 1.92e-01 -0.157 0.12 0.893 cMono_S100A L2
ENSG00000008405 CRY1 -833593 sc-eQTL 8.88e-01 -0.0198 0.14 0.873 gdT L2
ENSG00000013503 POLR3B -97792 sc-eQTL 9.47e-01 -0.00969 0.147 0.873 gdT L2
ENSG00000111785 RIC8B -514665 sc-eQTL 2.18e-01 -0.183 0.148 0.873 gdT L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 4.17e-01 0.13 0.159 0.873 gdT L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 5.92e-02 -0.263 0.138 0.873 gdT L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 9.70e-01 -0.00543 0.146 0.873 gdT L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 2.87e-01 -0.162 0.151 0.873 gdT L2
ENSG00000260329 AC007541.1 -695541 sc-eQTL 9.61e-01 -0.00718 0.145 0.873 gdT L2
ENSG00000008405 CRY1 -833593 sc-eQTL 9.10e-01 -0.0159 0.139 0.893 intMono L2
ENSG00000013503 POLR3B -97792 sc-eQTL 1.25e-01 -0.207 0.135 0.893 intMono L2
ENSG00000111785 RIC8B -514665 sc-eQTL 4.89e-01 -0.0917 0.132 0.893 intMono L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 3.68e-01 0.124 0.138 0.893 intMono L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 4.55e-01 0.116 0.155 0.893 intMono L2
ENSG00000008405 CRY1 -833593 sc-eQTL 5.56e-01 0.0567 0.096 0.891 ncMono L2
ENSG00000013503 POLR3B -97792 sc-eQTL 8.48e-01 -0.0237 0.124 0.891 ncMono L2
ENSG00000111785 RIC8B -514665 sc-eQTL 8.66e-01 -0.0203 0.12 0.891 ncMono L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 7.49e-01 -0.0411 0.128 0.891 ncMono L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 3.15e-01 -0.127 0.126 0.891 ncMono L2
ENSG00000008405 CRY1 -833593 sc-eQTL 5.87e-03 0.372 0.133 0.884 pDC L2
ENSG00000013503 POLR3B -97792 sc-eQTL 3.48e-01 -0.14 0.148 0.884 pDC L2
ENSG00000111785 RIC8B -514665 sc-eQTL 5.90e-01 0.0775 0.143 0.884 pDC L2
ENSG00000120832 MTERF2 -727204 sc-eQTL 8.28e-01 0.0293 0.134 0.884 pDC L2
ENSG00000136026 CKAP4 -44323 sc-eQTL 5.51e-02 -0.182 0.0943 0.884 pDC L2
ENSG00000151135 TMEM263 -695763 sc-eQTL 4.39e-01 0.118 0.152 0.884 pDC L2
ENSG00000166046 TCP11L2 -41973 sc-eQTL 8.30e-01 0.0309 0.143 0.884 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -833593 sc-eQTL 4.47e-01 0.0958 0.126 0.893 B_Memory LOneK1K
ENSG00000013503 POLR3B -97792 sc-eQTL 1.28e-01 0.221 0.144 0.893 B_Memory LOneK1K
ENSG00000111785 RIC8B -514665 sc-eQTL 7.35e-01 -0.0423 0.125 0.893 B_Memory LOneK1K
ENSG00000120832 MTERF2 -727204 sc-eQTL 2.50e-01 -0.162 0.141 0.893 B_Memory LOneK1K
ENSG00000136026 CKAP4 -44323 sc-eQTL 7.76e-01 -0.0279 0.098 0.893 B_Memory LOneK1K
ENSG00000151135 TMEM263 -695763 sc-eQTL 4.96e-01 0.0937 0.138 0.893 B_Memory LOneK1K
ENSG00000166046 TCP11L2 -41973 sc-eQTL 9.93e-01 -0.00109 0.119 0.893 B_Memory LOneK1K
ENSG00000008405 CRY1 -833593 sc-eQTL 4.73e-01 0.0781 0.109 0.893 B_Naive LOneK1K
ENSG00000013503 POLR3B -97792 sc-eQTL 7.84e-01 -0.0374 0.136 0.893 B_Naive LOneK1K
ENSG00000111785 RIC8B -514665 sc-eQTL 2.65e-01 0.149 0.133 0.893 B_Naive LOneK1K
ENSG00000120832 MTERF2 -727204 sc-eQTL 1.95e-01 0.189 0.145 0.893 B_Naive LOneK1K
ENSG00000136026 CKAP4 -44323 sc-eQTL 5.63e-01 -0.0587 0.101 0.893 B_Naive LOneK1K
ENSG00000151135 TMEM263 -695763 sc-eQTL 6.82e-01 -0.0564 0.137 0.893 B_Naive LOneK1K
ENSG00000166046 TCP11L2 -41973 sc-eQTL 3.32e-01 -0.086 0.0884 0.893 B_Naive LOneK1K
ENSG00000008405 CRY1 -833593 sc-eQTL 8.38e-01 -0.0238 0.116 0.893 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -97792 sc-eQTL 1.07e-01 -0.207 0.128 0.893 CD14_Mono LOneK1K
ENSG00000111785 RIC8B -514665 sc-eQTL 9.73e-01 -0.00399 0.119 0.893 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 -44323 sc-eQTL 7.04e-01 0.034 0.0895 0.893 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 -41973 sc-eQTL 1.59e-01 -0.134 0.0948 0.893 CD14_Mono LOneK1K
ENSG00000008405 CRY1 -833593 sc-eQTL 1.64e-01 0.138 0.0991 0.894 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -97792 sc-eQTL 4.69e-01 -0.0877 0.121 0.894 CD16_Mono LOneK1K
ENSG00000111785 RIC8B -514665 sc-eQTL 6.13e-01 -0.0583 0.115 0.894 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 -44323 sc-eQTL 7.90e-01 0.0319 0.12 0.894 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 -41973 sc-eQTL 5.43e-01 -0.0754 0.124 0.894 CD16_Mono LOneK1K
ENSG00000008405 CRY1 -833593 sc-eQTL 8.16e-01 0.0162 0.0697 0.894 NK_CD56dim LOneK1K
ENSG00000013503 POLR3B -97792 sc-eQTL 8.48e-01 0.0242 0.126 0.894 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 119923 sc-eQTL 8.17e-01 -0.0281 0.122 0.894 NK_CD56dim LOneK1K
ENSG00000111785 RIC8B -514665 sc-eQTL 4.39e-01 0.0902 0.116 0.894 NK_CD56dim LOneK1K
ENSG00000120832 MTERF2 -727204 sc-eQTL 1.55e-01 0.172 0.12 0.894 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 -44323 sc-eQTL 6.55e-01 -0.0517 0.116 0.894 NK_CD56dim LOneK1K
ENSG00000151135 TMEM263 -695763 sc-eQTL 4.59e-01 -0.0908 0.122 0.894 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 -41973 sc-eQTL 8.30e-01 -0.0213 0.0989 0.894 NK_CD56dim LOneK1K
ENSG00000260329 AC007541.1 -695541 sc-eQTL 8.94e-01 -0.0191 0.143 0.894 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000136026 \N -44323 1.3e-05 1.66e-05 2.64e-06 9.25e-06 2.4e-06 5.91e-06 1.99e-05 2.9e-06 1.5e-05 7.65e-06 1.96e-05 7.45e-06 2.62e-05 5.67e-06 4.38e-06 9.17e-06 7.86e-06 1.2e-05 3.54e-06 4.21e-06 7.18e-06 1.42e-05 1.49e-05 4.68e-06 2.48e-05 4.94e-06 7.7e-06 6.14e-06 1.59e-05 1.38e-05 1.05e-05 9.65e-07 1.29e-06 3.89e-06 6.34e-06 3.35e-06 1.76e-06 2.37e-06 2.2e-06 1.6e-06 1.07e-06 1.9e-05 2.27e-06 1.58e-07 1.17e-06 2.34e-06 2.05e-06 8.94e-07 8.26e-07