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Genes within 1Mb (chr12:106259447:G:GGT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -834102 sc-eQTL 4.35e-01 0.045 0.0575 0.714 B L1
ENSG00000013503 POLR3B -98301 sc-eQTL 8.44e-01 0.0165 0.0835 0.714 B L1
ENSG00000111785 RIC8B -515174 sc-eQTL 9.84e-02 -0.109 0.0659 0.714 B L1
ENSG00000120832 MTERF2 -727713 sc-eQTL 6.95e-01 -0.036 0.0918 0.714 B L1
ENSG00000136026 CKAP4 -44832 sc-eQTL 4.65e-02 0.0856 0.0427 0.714 B L1
ENSG00000151135 TMEM263 -696272 sc-eQTL 2.36e-01 0.0765 0.0643 0.714 B L1
ENSG00000166046 TCP11L2 -42482 sc-eQTL 2.63e-01 0.058 0.0517 0.714 B L1
ENSG00000008405 CRY1 -834102 sc-eQTL 9.94e-01 -0.000296 0.0387 0.714 CD4T L1
ENSG00000013503 POLR3B -98301 sc-eQTL 8.01e-01 -0.0155 0.0616 0.714 CD4T L1
ENSG00000111785 RIC8B -515174 sc-eQTL 6.76e-01 -0.0254 0.0606 0.714 CD4T L1
ENSG00000120832 MTERF2 -727713 sc-eQTL 8.02e-01 -0.0187 0.0745 0.714 CD4T L1
ENSG00000136026 CKAP4 -44832 sc-eQTL 1.80e-01 0.0705 0.0524 0.714 CD4T L1
ENSG00000151135 TMEM263 -696272 sc-eQTL 2.54e-01 0.0672 0.0587 0.714 CD4T L1
ENSG00000166046 TCP11L2 -42482 sc-eQTL 1.37e-01 -0.0794 0.0532 0.714 CD4T L1
ENSG00000260329 AC007541.1 -696050 sc-eQTL 9.33e-02 0.143 0.0846 0.714 CD4T L1
ENSG00000008405 CRY1 -834102 sc-eQTL 1.79e-01 -0.0667 0.0495 0.714 CD8T L1
ENSG00000013503 POLR3B -98301 sc-eQTL 8.73e-01 0.0118 0.0737 0.714 CD8T L1
ENSG00000111785 RIC8B -515174 sc-eQTL 6.58e-01 -0.0328 0.0741 0.714 CD8T L1
ENSG00000120832 MTERF2 -727713 sc-eQTL 5.64e-01 -0.0443 0.0768 0.714 CD8T L1
ENSG00000136026 CKAP4 -44832 sc-eQTL 2.57e-01 0.0552 0.0485 0.714 CD8T L1
ENSG00000151135 TMEM263 -696272 sc-eQTL 9.64e-01 -0.0029 0.0634 0.714 CD8T L1
ENSG00000166046 TCP11L2 -42482 sc-eQTL 7.68e-01 0.0128 0.0432 0.714 CD8T L1
ENSG00000260329 AC007541.1 -696050 sc-eQTL 1.35e-01 0.138 0.0922 0.714 CD8T L1
ENSG00000008405 CRY1 -834102 sc-eQTL 9.71e-01 0.00291 0.0811 0.705 DC L1
ENSG00000013503 POLR3B -98301 sc-eQTL 9.42e-01 -0.00635 0.0865 0.705 DC L1
ENSG00000111785 RIC8B -515174 sc-eQTL 4.71e-01 -0.0645 0.0894 0.705 DC L1
ENSG00000120832 MTERF2 -727713 sc-eQTL 8.66e-01 -0.014 0.0832 0.705 DC L1
ENSG00000136026 CKAP4 -44832 sc-eQTL 1.42e-01 0.0873 0.0592 0.705 DC L1
ENSG00000151135 TMEM263 -696272 sc-eQTL 6.98e-01 -0.0323 0.083 0.705 DC L1
ENSG00000166046 TCP11L2 -42482 sc-eQTL 3.08e-01 -0.0912 0.0892 0.705 DC L1
ENSG00000008405 CRY1 -834102 sc-eQTL 7.70e-01 0.0181 0.0617 0.714 Mono L1
ENSG00000013503 POLR3B -98301 sc-eQTL 7.34e-01 -0.0252 0.0741 0.714 Mono L1
ENSG00000111785 RIC8B -515174 sc-eQTL 5.09e-02 -0.138 0.0705 0.714 Mono L1
ENSG00000136026 CKAP4 -44832 sc-eQTL 1.76e-04 0.196 0.0514 0.714 Mono L1
ENSG00000166046 TCP11L2 -42482 sc-eQTL 8.41e-01 -0.0124 0.0616 0.714 Mono L1
ENSG00000008405 CRY1 -834102 sc-eQTL 8.21e-01 -0.0101 0.0447 0.715 NK L1
ENSG00000013503 POLR3B -98301 sc-eQTL 3.72e-01 -0.0715 0.08 0.715 NK L1
ENSG00000074590 NUAK1 119414 sc-eQTL 4.00e-01 0.0665 0.0788 0.715 NK L1
ENSG00000111785 RIC8B -515174 sc-eQTL 1.15e-01 0.117 0.0742 0.715 NK L1
ENSG00000120832 MTERF2 -727713 sc-eQTL 4.12e-01 0.0631 0.0767 0.715 NK L1
ENSG00000136026 CKAP4 -44832 sc-eQTL 5.43e-01 -0.0436 0.0716 0.715 NK L1
ENSG00000151135 TMEM263 -696272 sc-eQTL 8.61e-01 0.0136 0.0774 0.715 NK L1
ENSG00000166046 TCP11L2 -42482 sc-eQTL 2.49e-02 -0.146 0.0645 0.715 NK L1
ENSG00000260329 AC007541.1 -696050 sc-eQTL 6.30e-01 -0.045 0.0932 0.715 NK L1
ENSG00000008405 CRY1 -834102 sc-eQTL 7.21e-01 0.0174 0.0488 0.714 Other_T L1
ENSG00000013503 POLR3B -98301 sc-eQTL 3.52e-01 -0.0851 0.0912 0.714 Other_T L1
ENSG00000111785 RIC8B -515174 sc-eQTL 9.75e-02 0.106 0.0637 0.714 Other_T L1
ENSG00000120832 MTERF2 -727713 sc-eQTL 9.31e-02 -0.128 0.0761 0.714 Other_T L1
ENSG00000136026 CKAP4 -44832 sc-eQTL 1.39e-01 0.0846 0.057 0.714 Other_T L1
ENSG00000151135 TMEM263 -696272 sc-eQTL 4.35e-01 0.0624 0.0799 0.714 Other_T L1
ENSG00000166046 TCP11L2 -42482 sc-eQTL 1.70e-01 -0.0964 0.07 0.714 Other_T L1
ENSG00000260329 AC007541.1 -696050 sc-eQTL 2.32e-01 -0.103 0.0863 0.714 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -834102 sc-eQTL 9.39e-01 -0.00735 0.0964 0.712 B_Activated L2
ENSG00000013503 POLR3B -98301 sc-eQTL 4.68e-01 -0.0689 0.0947 0.712 B_Activated L2
ENSG00000111785 RIC8B -515174 sc-eQTL 3.81e-01 -0.0843 0.096 0.712 B_Activated L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 1.98e-01 0.0963 0.0744 0.712 B_Activated L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 3.22e-02 0.192 0.089 0.712 B_Activated L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 4.68e-02 0.199 0.0994 0.712 B_Activated L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 2.19e-01 0.123 0.0999 0.712 B_Activated L2
ENSG00000008405 CRY1 -834102 sc-eQTL 7.13e-01 0.0312 0.0847 0.715 B_Intermediate L2
ENSG00000013503 POLR3B -98301 sc-eQTL 3.43e-01 0.0888 0.0934 0.715 B_Intermediate L2
ENSG00000111785 RIC8B -515174 sc-eQTL 2.25e-02 -0.188 0.082 0.715 B_Intermediate L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 7.37e-01 -0.03 0.0891 0.715 B_Intermediate L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 2.66e-02 0.153 0.0685 0.715 B_Intermediate L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 7.55e-01 -0.0277 0.0886 0.715 B_Intermediate L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 5.10e-01 0.053 0.0804 0.715 B_Intermediate L2
ENSG00000008405 CRY1 -834102 sc-eQTL 7.55e-01 0.0277 0.0889 0.711 B_Memory L2
ENSG00000013503 POLR3B -98301 sc-eQTL 5.53e-03 0.258 0.0921 0.711 B_Memory L2
ENSG00000111785 RIC8B -515174 sc-eQTL 3.98e-01 0.0746 0.0881 0.711 B_Memory L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 4.42e-01 -0.0612 0.0795 0.711 B_Memory L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 1.92e-01 0.103 0.0789 0.711 B_Memory L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 6.96e-01 0.0352 0.09 0.711 B_Memory L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 1.53e-01 0.113 0.0786 0.711 B_Memory L2
ENSG00000008405 CRY1 -834102 sc-eQTL 3.53e-01 0.0711 0.0763 0.714 B_Naive1 L2
ENSG00000013503 POLR3B -98301 sc-eQTL 1.66e-01 -0.119 0.0855 0.714 B_Naive1 L2
ENSG00000111785 RIC8B -515174 sc-eQTL 4.67e-01 -0.0611 0.0838 0.714 B_Naive1 L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 5.52e-01 0.0548 0.092 0.714 B_Naive1 L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 4.94e-01 0.0443 0.0647 0.714 B_Naive1 L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 5.99e-02 0.171 0.0903 0.714 B_Naive1 L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 3.66e-01 0.0574 0.0634 0.714 B_Naive1 L2
ENSG00000008405 CRY1 -834102 sc-eQTL 9.64e-01 -0.00409 0.091 0.712 B_Naive2 L2
ENSG00000013503 POLR3B -98301 sc-eQTL 7.89e-01 0.0246 0.0917 0.712 B_Naive2 L2
ENSG00000111785 RIC8B -515174 sc-eQTL 8.56e-01 -0.0148 0.0815 0.712 B_Naive2 L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 7.22e-01 -0.033 0.0927 0.712 B_Naive2 L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 8.97e-03 0.206 0.0783 0.712 B_Naive2 L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 1.68e-01 0.127 0.0919 0.712 B_Naive2 L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 8.36e-01 0.014 0.0678 0.712 B_Naive2 L2
ENSG00000008405 CRY1 -834102 sc-eQTL 1.52e-01 0.104 0.0722 0.707 CD4_CTL L2
ENSG00000013503 POLR3B -98301 sc-eQTL 6.65e-01 -0.0382 0.0882 0.707 CD4_CTL L2
ENSG00000111785 RIC8B -515174 sc-eQTL 2.45e-01 0.108 0.0926 0.707 CD4_CTL L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 8.27e-01 -0.0194 0.0887 0.707 CD4_CTL L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 7.64e-01 -0.0219 0.0728 0.707 CD4_CTL L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 3.88e-01 0.0814 0.0941 0.707 CD4_CTL L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 5.00e-01 -0.062 0.0919 0.707 CD4_CTL L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 3.79e-01 0.0696 0.0789 0.707 CD4_CTL L2
ENSG00000008405 CRY1 -834102 sc-eQTL 9.50e-01 0.00283 0.0452 0.714 CD4_Naive L2
ENSG00000013503 POLR3B -98301 sc-eQTL 9.28e-01 -0.00619 0.0687 0.714 CD4_Naive L2
ENSG00000111785 RIC8B -515174 sc-eQTL 7.84e-01 0.0179 0.065 0.714 CD4_Naive L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 4.05e-01 -0.072 0.0863 0.714 CD4_Naive L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 5.24e-01 0.0376 0.0589 0.714 CD4_Naive L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 3.28e-01 0.0619 0.0631 0.714 CD4_Naive L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 1.07e-01 -0.0952 0.0587 0.714 CD4_Naive L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 9.99e-02 0.147 0.0887 0.714 CD4_Naive L2
ENSG00000008405 CRY1 -834102 sc-eQTL 8.87e-01 -0.00805 0.0564 0.714 CD4_TCM L2
ENSG00000013503 POLR3B -98301 sc-eQTL 7.90e-01 -0.0207 0.0775 0.714 CD4_TCM L2
ENSG00000111785 RIC8B -515174 sc-eQTL 3.03e-01 -0.0834 0.0808 0.714 CD4_TCM L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 7.05e-01 0.0354 0.0932 0.714 CD4_TCM L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 4.54e-02 0.114 0.0564 0.714 CD4_TCM L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 6.91e-01 -0.0309 0.0775 0.714 CD4_TCM L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 4.16e-01 -0.051 0.0626 0.714 CD4_TCM L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 2.68e-01 0.104 0.0937 0.714 CD4_TCM L2
ENSG00000008405 CRY1 -834102 sc-eQTL 4.51e-01 -0.0582 0.0772 0.714 CD4_TEM L2
ENSG00000013503 POLR3B -98301 sc-eQTL 8.52e-01 0.0181 0.0968 0.714 CD4_TEM L2
ENSG00000111785 RIC8B -515174 sc-eQTL 2.86e-01 -0.0945 0.0883 0.714 CD4_TEM L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 6.60e-01 0.0417 0.0946 0.714 CD4_TEM L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 7.01e-03 0.203 0.0747 0.714 CD4_TEM L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 2.22e-01 0.106 0.0869 0.714 CD4_TEM L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 5.59e-01 -0.0445 0.0759 0.714 CD4_TEM L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 7.30e-01 -0.0316 0.0914 0.714 CD4_TEM L2
ENSG00000008405 CRY1 -834102 sc-eQTL 1.74e-02 -0.14 0.0582 0.714 CD8_CTL L2
ENSG00000013503 POLR3B -98301 sc-eQTL 1.62e-01 -0.124 0.0884 0.714 CD8_CTL L2
ENSG00000111785 RIC8B -515174 sc-eQTL 8.37e-01 -0.0172 0.0834 0.714 CD8_CTL L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 6.63e-01 -0.0403 0.0923 0.714 CD8_CTL L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 4.45e-01 -0.0604 0.079 0.714 CD8_CTL L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 6.48e-01 0.0348 0.0762 0.714 CD8_CTL L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 4.15e-02 -0.172 0.084 0.714 CD8_CTL L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 3.66e-01 0.0851 0.0939 0.714 CD8_CTL L2
ENSG00000008405 CRY1 -834102 sc-eQTL 2.36e-01 -0.0786 0.0661 0.714 CD8_Naive L2
ENSG00000013503 POLR3B -98301 sc-eQTL 7.94e-02 0.141 0.0799 0.714 CD8_Naive L2
ENSG00000111785 RIC8B -515174 sc-eQTL 2.82e-01 -0.0922 0.0856 0.714 CD8_Naive L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 8.55e-01 -0.016 0.088 0.714 CD8_Naive L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 2.14e-01 0.0892 0.0715 0.714 CD8_Naive L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 7.08e-01 0.0287 0.0765 0.714 CD8_Naive L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 9.59e-02 0.107 0.0637 0.714 CD8_Naive L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 4.60e-01 0.0669 0.0903 0.714 CD8_Naive L2
ENSG00000008405 CRY1 -834102 sc-eQTL 8.14e-01 -0.0189 0.0799 0.708 CD8_TCM L2
ENSG00000013503 POLR3B -98301 sc-eQTL 2.46e-02 -0.213 0.0939 0.708 CD8_TCM L2
ENSG00000111785 RIC8B -515174 sc-eQTL 1.34e-02 0.224 0.0899 0.708 CD8_TCM L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 2.94e-01 -0.0963 0.0915 0.708 CD8_TCM L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 8.24e-01 0.0185 0.083 0.708 CD8_TCM L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 6.68e-01 -0.0407 0.0947 0.708 CD8_TCM L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 2.87e-01 0.0852 0.0798 0.708 CD8_TCM L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 5.95e-01 0.0461 0.0866 0.708 CD8_TCM L2
ENSG00000008405 CRY1 -834102 sc-eQTL 1.96e-01 0.107 0.0825 0.708 CD8_TEM L2
ENSG00000013503 POLR3B -98301 sc-eQTL 6.76e-01 0.0393 0.0939 0.708 CD8_TEM L2
ENSG00000111785 RIC8B -515174 sc-eQTL 5.97e-01 0.0476 0.0897 0.708 CD8_TEM L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 6.34e-01 0.0449 0.0941 0.708 CD8_TEM L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 5.41e-01 0.0528 0.0863 0.708 CD8_TEM L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 9.77e-01 -0.00268 0.0945 0.708 CD8_TEM L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 8.76e-01 -0.014 0.09 0.708 CD8_TEM L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 2.17e-01 -0.103 0.0828 0.708 CD8_TEM L2
ENSG00000008405 CRY1 -834102 sc-eQTL 6.74e-01 0.0296 0.0703 0.71 MAIT L2
ENSG00000013503 POLR3B -98301 sc-eQTL 8.40e-01 -0.0179 0.0886 0.71 MAIT L2
ENSG00000111785 RIC8B -515174 sc-eQTL 9.91e-02 0.129 0.0781 0.71 MAIT L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 2.21e-01 -0.105 0.0856 0.71 MAIT L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 4.69e-01 0.0575 0.0794 0.71 MAIT L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 4.15e-01 0.0759 0.0928 0.71 MAIT L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 6.10e-01 -0.0414 0.0809 0.71 MAIT L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 7.14e-01 -0.0319 0.0871 0.71 MAIT L2
ENSG00000008405 CRY1 -834102 sc-eQTL 4.17e-01 -0.0574 0.0706 0.713 NK_CD56bright L2
ENSG00000013503 POLR3B -98301 sc-eQTL 3.61e-01 -0.0816 0.0892 0.713 NK_CD56bright L2
ENSG00000074590 NUAK1 119414 sc-eQTL 7.03e-01 -0.0298 0.078 0.713 NK_CD56bright L2
ENSG00000111785 RIC8B -515174 sc-eQTL 7.31e-02 0.173 0.0962 0.713 NK_CD56bright L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 7.87e-01 -0.0245 0.0908 0.713 NK_CD56bright L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 1.11e-01 -0.117 0.0727 0.713 NK_CD56bright L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 7.78e-01 0.0256 0.0907 0.713 NK_CD56bright L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 9.73e-01 -0.00312 0.0934 0.713 NK_CD56bright L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 6.02e-01 0.0466 0.0894 0.713 NK_CD56bright L2
ENSG00000008405 CRY1 -834102 sc-eQTL 7.09e-01 -0.0203 0.0543 0.716 NK_CD56dim L2
ENSG00000013503 POLR3B -98301 sc-eQTL 4.23e-01 -0.0654 0.0815 0.716 NK_CD56dim L2
ENSG00000074590 NUAK1 119414 sc-eQTL 4.90e-01 -0.055 0.0796 0.716 NK_CD56dim L2
ENSG00000111785 RIC8B -515174 sc-eQTL 9.04e-01 0.00988 0.0816 0.716 NK_CD56dim L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 3.85e-01 0.0704 0.0809 0.716 NK_CD56dim L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 9.60e-01 -0.00406 0.0818 0.716 NK_CD56dim L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 2.78e-01 0.0916 0.0843 0.716 NK_CD56dim L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 7.48e-03 -0.191 0.0706 0.716 NK_CD56dim L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 4.58e-02 -0.188 0.0935 0.716 NK_CD56dim L2
ENSG00000008405 CRY1 -834102 sc-eQTL 1.63e-01 -0.106 0.0755 0.719 NK_HLA L2
ENSG00000013503 POLR3B -98301 sc-eQTL 8.86e-01 0.0131 0.0917 0.719 NK_HLA L2
ENSG00000074590 NUAK1 119414 sc-eQTL 6.94e-01 0.0352 0.0894 0.719 NK_HLA L2
ENSG00000111785 RIC8B -515174 sc-eQTL 8.52e-03 0.245 0.0923 0.719 NK_HLA L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 2.62e-02 -0.21 0.0939 0.719 NK_HLA L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 3.06e-01 -0.0846 0.0824 0.719 NK_HLA L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 7.84e-01 -0.026 0.0947 0.719 NK_HLA L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 9.21e-01 -0.00926 0.093 0.719 NK_HLA L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 3.48e-01 -0.0818 0.0869 0.719 NK_HLA L2
ENSG00000008405 CRY1 -834102 sc-eQTL 7.33e-01 -0.0214 0.0627 0.716 NK_cytokine L2
ENSG00000013503 POLR3B -98301 sc-eQTL 7.98e-01 0.0231 0.09 0.716 NK_cytokine L2
ENSG00000074590 NUAK1 119414 sc-eQTL 1.12e-01 0.132 0.0826 0.716 NK_cytokine L2
ENSG00000111785 RIC8B -515174 sc-eQTL 3.87e-01 0.0738 0.0852 0.716 NK_cytokine L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 5.09e-01 0.0576 0.087 0.716 NK_cytokine L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 7.42e-01 -0.0271 0.0823 0.716 NK_cytokine L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 9.31e-01 -0.0077 0.0895 0.716 NK_cytokine L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 8.30e-02 -0.127 0.0731 0.716 NK_cytokine L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 7.27e-01 0.0319 0.0913 0.716 NK_cytokine L2
ENSG00000008405 CRY1 -834102 sc-eQTL 1.32e-01 -0.154 0.102 0.693 PB L2
ENSG00000013503 POLR3B -98301 sc-eQTL 3.58e-01 -0.102 0.11 0.693 PB L2
ENSG00000111785 RIC8B -515174 sc-eQTL 8.68e-02 -0.168 0.0975 0.693 PB L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 2.66e-01 -0.103 0.0924 0.693 PB L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 1.37e-01 0.0921 0.0615 0.693 PB L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 5.34e-01 0.0495 0.0793 0.693 PB L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 3.80e-02 -0.214 0.102 0.693 PB L2
ENSG00000008405 CRY1 -834102 sc-eQTL 1.76e-01 0.0872 0.0642 0.713 Pro_T L2
ENSG00000013503 POLR3B -98301 sc-eQTL 6.06e-01 0.048 0.0931 0.713 Pro_T L2
ENSG00000111785 RIC8B -515174 sc-eQTL 6.13e-01 -0.0444 0.0876 0.713 Pro_T L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 6.56e-01 0.0392 0.0878 0.713 Pro_T L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 1.87e-01 -0.0642 0.0485 0.713 Pro_T L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 2.32e-01 0.097 0.081 0.713 Pro_T L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 6.94e-01 0.0295 0.075 0.713 Pro_T L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 4.97e-01 0.0528 0.0776 0.713 Pro_T L2
ENSG00000008405 CRY1 -834102 sc-eQTL 4.69e-01 0.0555 0.0764 0.714 Treg L2
ENSG00000013503 POLR3B -98301 sc-eQTL 3.45e-01 -0.0858 0.0906 0.714 Treg L2
ENSG00000111785 RIC8B -515174 sc-eQTL 4.18e-01 -0.0701 0.0864 0.714 Treg L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 7.10e-01 0.035 0.0938 0.714 Treg L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 7.73e-01 0.0194 0.067 0.714 Treg L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 1.01e-02 0.222 0.0855 0.714 Treg L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 1.95e-01 0.0935 0.072 0.714 Treg L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 9.70e-01 0.00319 0.0853 0.714 Treg L2
ENSG00000008405 CRY1 -834102 sc-eQTL 2.24e-01 0.109 0.0892 0.698 cDC L2
ENSG00000013503 POLR3B -98301 sc-eQTL 8.16e-01 0.02 0.0861 0.698 cDC L2
ENSG00000111785 RIC8B -515174 sc-eQTL 6.95e-01 -0.0357 0.091 0.698 cDC L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 7.42e-01 -0.0258 0.0783 0.698 cDC L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 2.61e-01 0.072 0.0638 0.698 cDC L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 8.21e-01 0.019 0.0839 0.698 cDC L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 2.04e-01 -0.121 0.095 0.698 cDC L2
ENSG00000008405 CRY1 -834102 sc-eQTL 9.76e-01 0.00232 0.0775 0.714 cMono_IL1B L2
ENSG00000013503 POLR3B -98301 sc-eQTL 6.69e-01 -0.0375 0.0875 0.714 cMono_IL1B L2
ENSG00000111785 RIC8B -515174 sc-eQTL 4.89e-03 -0.221 0.0778 0.714 cMono_IL1B L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 5.26e-03 0.166 0.0588 0.714 cMono_IL1B L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 7.04e-01 0.0272 0.0715 0.714 cMono_IL1B L2
ENSG00000008405 CRY1 -834102 sc-eQTL 2.84e-01 0.0966 0.09 0.714 cMono_S100A L2
ENSG00000013503 POLR3B -98301 sc-eQTL 8.00e-01 0.0228 0.0899 0.714 cMono_S100A L2
ENSG00000111785 RIC8B -515174 sc-eQTL 8.67e-01 -0.0139 0.0832 0.714 cMono_S100A L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 4.74e-02 0.13 0.0651 0.714 cMono_S100A L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 1.37e-01 -0.114 0.0767 0.714 cMono_S100A L2
ENSG00000008405 CRY1 -834102 sc-eQTL 2.65e-01 0.109 0.0974 0.682 gdT L2
ENSG00000013503 POLR3B -98301 sc-eQTL 4.58e-01 -0.0762 0.102 0.682 gdT L2
ENSG00000111785 RIC8B -515174 sc-eQTL 3.97e-01 0.0883 0.104 0.682 gdT L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 7.82e-01 -0.031 0.112 0.682 gdT L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 2.77e-01 0.106 0.0974 0.682 gdT L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 2.08e-01 0.128 0.102 0.682 gdT L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 8.70e-01 -0.0174 0.106 0.682 gdT L2
ENSG00000260329 AC007541.1 -696050 sc-eQTL 2.83e-01 -0.109 0.101 0.682 gdT L2
ENSG00000008405 CRY1 -834102 sc-eQTL 1.07e-01 -0.144 0.0888 0.709 intMono L2
ENSG00000013503 POLR3B -98301 sc-eQTL 1.52e-01 0.124 0.0864 0.709 intMono L2
ENSG00000111785 RIC8B -515174 sc-eQTL 7.48e-01 -0.0273 0.0849 0.709 intMono L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 2.25e-03 0.268 0.0865 0.709 intMono L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 9.80e-01 0.00251 0.0993 0.709 intMono L2
ENSG00000008405 CRY1 -834102 sc-eQTL 8.31e-01 0.014 0.0653 0.71 ncMono L2
ENSG00000013503 POLR3B -98301 sc-eQTL 5.72e-01 -0.0476 0.0841 0.71 ncMono L2
ENSG00000111785 RIC8B -515174 sc-eQTL 9.51e-01 -0.00498 0.0817 0.71 ncMono L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 2.12e-03 0.265 0.085 0.71 ncMono L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 8.55e-01 0.0157 0.0856 0.71 ncMono L2
ENSG00000008405 CRY1 -834102 sc-eQTL 6.71e-01 -0.0392 0.0921 0.698 pDC L2
ENSG00000013503 POLR3B -98301 sc-eQTL 8.92e-01 -0.0137 0.101 0.698 pDC L2
ENSG00000111785 RIC8B -515174 sc-eQTL 5.76e-01 0.0544 0.097 0.698 pDC L2
ENSG00000120832 MTERF2 -727713 sc-eQTL 5.56e-01 0.0536 0.0908 0.698 pDC L2
ENSG00000136026 CKAP4 -44832 sc-eQTL 1.50e-01 0.0927 0.0641 0.698 pDC L2
ENSG00000151135 TMEM263 -696272 sc-eQTL 4.87e-01 -0.0716 0.103 0.698 pDC L2
ENSG00000166046 TCP11L2 -42482 sc-eQTL 9.59e-01 0.00493 0.0969 0.698 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -834102 sc-eQTL 4.70e-01 0.0585 0.0808 0.714 B_Memory LOneK1K
ENSG00000013503 POLR3B -98301 sc-eQTL 2.74e-02 0.205 0.0923 0.714 B_Memory LOneK1K
ENSG00000111785 RIC8B -515174 sc-eQTL 2.86e-01 -0.0856 0.0799 0.714 B_Memory LOneK1K
ENSG00000120832 MTERF2 -727713 sc-eQTL 5.27e-01 -0.0574 0.0906 0.714 B_Memory LOneK1K
ENSG00000136026 CKAP4 -44832 sc-eQTL 6.96e-03 0.169 0.062 0.714 B_Memory LOneK1K
ENSG00000151135 TMEM263 -696272 sc-eQTL 8.11e-01 0.0212 0.0886 0.714 B_Memory LOneK1K
ENSG00000166046 TCP11L2 -42482 sc-eQTL 4.93e-02 0.15 0.0757 0.714 B_Memory LOneK1K
ENSG00000008405 CRY1 -834102 sc-eQTL 4.94e-01 0.0478 0.0698 0.714 B_Naive LOneK1K
ENSG00000013503 POLR3B -98301 sc-eQTL 6.08e-01 -0.0449 0.0874 0.714 B_Naive LOneK1K
ENSG00000111785 RIC8B -515174 sc-eQTL 6.69e-01 -0.0367 0.0856 0.714 B_Naive LOneK1K
ENSG00000120832 MTERF2 -727713 sc-eQTL 9.37e-01 0.00744 0.0936 0.714 B_Naive LOneK1K
ENSG00000136026 CKAP4 -44832 sc-eQTL 4.78e-02 0.129 0.0646 0.714 B_Naive LOneK1K
ENSG00000151135 TMEM263 -696272 sc-eQTL 3.16e-02 0.189 0.0873 0.714 B_Naive LOneK1K
ENSG00000166046 TCP11L2 -42482 sc-eQTL 1.72e-01 0.0776 0.0566 0.714 B_Naive LOneK1K
ENSG00000008405 CRY1 -834102 sc-eQTL 4.83e-01 0.0526 0.075 0.714 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -98301 sc-eQTL 4.31e-01 -0.0655 0.0829 0.714 CD14_Mono LOneK1K
ENSG00000111785 RIC8B -515174 sc-eQTL 1.24e-02 -0.191 0.0758 0.714 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 -44832 sc-eQTL 6.14e-03 0.157 0.0567 0.714 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 -42482 sc-eQTL 8.70e-01 -0.01 0.0614 0.714 CD14_Mono LOneK1K
ENSG00000008405 CRY1 -834102 sc-eQTL 1.98e-01 -0.084 0.0651 0.713 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -98301 sc-eQTL 9.52e-01 -0.00475 0.0796 0.713 CD16_Mono LOneK1K
ENSG00000111785 RIC8B -515174 sc-eQTL 7.52e-01 0.024 0.0757 0.713 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 -44832 sc-eQTL 5.84e-04 0.266 0.0763 0.713 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 -42482 sc-eQTL 7.35e-01 0.0276 0.0813 0.713 CD16_Mono LOneK1K
ENSG00000008405 CRY1 -834102 sc-eQTL 8.78e-01 -0.00704 0.0457 0.716 NK_CD56dim LOneK1K
ENSG00000013503 POLR3B -98301 sc-eQTL 8.67e-01 0.0139 0.0829 0.716 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 119414 sc-eQTL 7.06e-01 0.0301 0.0798 0.716 NK_CD56dim LOneK1K
ENSG00000111785 RIC8B -515174 sc-eQTL 2.61e-01 0.086 0.0762 0.716 NK_CD56dim LOneK1K
ENSG00000120832 MTERF2 -727713 sc-eQTL 4.30e-01 0.0626 0.0792 0.716 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 -44832 sc-eQTL 8.70e-01 0.0124 0.0759 0.716 NK_CD56dim LOneK1K
ENSG00000151135 TMEM263 -696272 sc-eQTL 8.31e-01 -0.0172 0.0803 0.716 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 -42482 sc-eQTL 8.96e-03 -0.168 0.0638 0.716 NK_CD56dim LOneK1K
ENSG00000260329 AC007541.1 -696050 sc-eQTL 2.75e-01 -0.102 0.0935 0.716 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136026 CKAP4 -44832 pQTL 1.13e-05 0.0644 0.0146 0.0 0.0 0.301
ENSG00000136026 CKAP4 -44832 eQTL 0.0415 0.0236 0.0116 0.0 0.0 0.306

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000151135 \N -696272 1.25e-06 2.3e-07 5.35e-08 2.2e-07 9.16e-08 2.54e-07 5.13e-07 5.21e-08 1.98e-07 4.94e-08 1.67e-07 9e-08 3.48e-07 8e-08 5.84e-08 1.14e-07 3.9e-08 3.12e-07 5.75e-08 3.29e-08 1.27e-07 1.98e-07 2e-07 4.53e-08 2.28e-07 1.25e-07 1.22e-07 9.57e-08 1.39e-07 1.81e-07 1.26e-07 3.19e-08 2.74e-08 8.65e-08 7.51e-08 3.77e-08 4.85e-08 9.25e-08 8.14e-08 3.09e-08 3.71e-08 2.91e-07 4.01e-08 7.43e-09 1.12e-07 1.92e-08 1.24e-07 4.96e-09 4.72e-08