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Genes within 1Mb (chr12:106258865:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -834684 sc-eQTL 9.40e-01 -0.00444 0.0593 0.301 B L1
ENSG00000013503 POLR3B -98883 sc-eQTL 1.61e-01 -0.12 0.0856 0.301 B L1
ENSG00000111785 RIC8B -515756 sc-eQTL 1.75e-01 0.0927 0.0681 0.301 B L1
ENSG00000120832 MTERF2 -728295 sc-eQTL 4.51e-01 0.0714 0.0945 0.301 B L1
ENSG00000136026 CKAP4 -45414 sc-eQTL 8.73e-01 -0.00711 0.0445 0.301 B L1
ENSG00000151135 TMEM263 -696854 sc-eQTL 6.22e-01 0.0328 0.0665 0.301 B L1
ENSG00000166046 TCP11L2 -43064 sc-eQTL 4.88e-01 0.0371 0.0533 0.301 B L1
ENSG00000008405 CRY1 -834684 sc-eQTL 3.78e-01 0.0357 0.0404 0.301 CD4T L1
ENSG00000013503 POLR3B -98883 sc-eQTL 6.90e-01 0.0257 0.0644 0.301 CD4T L1
ENSG00000111785 RIC8B -515756 sc-eQTL 8.39e-01 0.0129 0.0634 0.301 CD4T L1
ENSG00000120832 MTERF2 -728295 sc-eQTL 5.60e-01 0.0454 0.0778 0.301 CD4T L1
ENSG00000136026 CKAP4 -45414 sc-eQTL 6.70e-02 0.1 0.0546 0.301 CD4T L1
ENSG00000151135 TMEM263 -696854 sc-eQTL 8.07e-01 0.0151 0.0616 0.301 CD4T L1
ENSG00000166046 TCP11L2 -43064 sc-eQTL 9.35e-02 0.0937 0.0556 0.301 CD4T L1
ENSG00000260329 AC007541.1 -696632 sc-eQTL 1.22e-01 -0.138 0.0886 0.301 CD4T L1
ENSG00000008405 CRY1 -834684 sc-eQTL 9.10e-01 -0.00574 0.0508 0.301 CD8T L1
ENSG00000013503 POLR3B -98883 sc-eQTL 8.71e-01 0.0123 0.0754 0.301 CD8T L1
ENSG00000111785 RIC8B -515756 sc-eQTL 9.30e-01 -0.00664 0.0758 0.301 CD8T L1
ENSG00000120832 MTERF2 -728295 sc-eQTL 4.57e-02 0.156 0.0779 0.301 CD8T L1
ENSG00000136026 CKAP4 -45414 sc-eQTL 2.76e-01 0.0543 0.0497 0.301 CD8T L1
ENSG00000151135 TMEM263 -696854 sc-eQTL 3.25e-01 0.0638 0.0647 0.301 CD8T L1
ENSG00000166046 TCP11L2 -43064 sc-eQTL 6.10e-01 0.0226 0.0442 0.301 CD8T L1
ENSG00000260329 AC007541.1 -696632 sc-eQTL 1.24e-01 -0.146 0.0943 0.301 CD8T L1
ENSG00000008405 CRY1 -834684 sc-eQTL 1.07e-01 -0.134 0.0824 0.309 DC L1
ENSG00000013503 POLR3B -98883 sc-eQTL 9.00e-01 0.0112 0.0885 0.309 DC L1
ENSG00000111785 RIC8B -515756 sc-eQTL 5.40e-02 0.176 0.0907 0.309 DC L1
ENSG00000120832 MTERF2 -728295 sc-eQTL 5.46e-01 0.0514 0.0851 0.309 DC L1
ENSG00000136026 CKAP4 -45414 sc-eQTL 2.95e-01 0.0637 0.0607 0.309 DC L1
ENSG00000151135 TMEM263 -696854 sc-eQTL 5.17e-02 0.165 0.0841 0.309 DC L1
ENSG00000166046 TCP11L2 -43064 sc-eQTL 4.93e-01 0.0627 0.0914 0.309 DC L1
ENSG00000008405 CRY1 -834684 sc-eQTL 6.02e-02 -0.117 0.0619 0.301 Mono L1
ENSG00000013503 POLR3B -98883 sc-eQTL 3.57e-03 -0.217 0.0735 0.301 Mono L1
ENSG00000111785 RIC8B -515756 sc-eQTL 2.71e-01 0.0793 0.0718 0.301 Mono L1
ENSG00000136026 CKAP4 -45414 sc-eQTL 6.46e-01 0.0247 0.0537 0.301 Mono L1
ENSG00000166046 TCP11L2 -43064 sc-eQTL 4.89e-01 -0.0432 0.0623 0.301 Mono L1
ENSG00000008405 CRY1 -834684 sc-eQTL 7.85e-01 0.0126 0.0461 0.3 NK L1
ENSG00000013503 POLR3B -98883 sc-eQTL 2.16e-01 -0.102 0.0822 0.3 NK L1
ENSG00000074590 NUAK1 118832 sc-eQTL 6.81e-01 -0.0334 0.0812 0.3 NK L1
ENSG00000111785 RIC8B -515756 sc-eQTL 7.21e-01 0.0275 0.0768 0.3 NK L1
ENSG00000120832 MTERF2 -728295 sc-eQTL 8.61e-01 0.0139 0.0792 0.3 NK L1
ENSG00000136026 CKAP4 -45414 sc-eQTL 2.30e-05 0.306 0.0708 0.3 NK L1
ENSG00000151135 TMEM263 -696854 sc-eQTL 4.85e-01 0.0557 0.0796 0.3 NK L1
ENSG00000166046 TCP11L2 -43064 sc-eQTL 1.09e-01 0.108 0.0669 0.3 NK L1
ENSG00000260329 AC007541.1 -696632 sc-eQTL 5.92e-01 0.0515 0.096 0.3 NK L1
ENSG00000008405 CRY1 -834684 sc-eQTL 1.22e-01 0.0762 0.0491 0.301 Other_T L1
ENSG00000013503 POLR3B -98883 sc-eQTL 9.30e-01 0.00817 0.0925 0.301 Other_T L1
ENSG00000111785 RIC8B -515756 sc-eQTL 1.48e-01 -0.0936 0.0645 0.301 Other_T L1
ENSG00000120832 MTERF2 -728295 sc-eQTL 5.73e-02 0.147 0.0769 0.301 Other_T L1
ENSG00000136026 CKAP4 -45414 sc-eQTL 8.73e-01 0.00926 0.058 0.301 Other_T L1
ENSG00000151135 TMEM263 -696854 sc-eQTL 4.83e-01 0.0568 0.0809 0.301 Other_T L1
ENSG00000166046 TCP11L2 -43064 sc-eQTL 9.10e-01 0.00809 0.0711 0.301 Other_T L1
ENSG00000260329 AC007541.1 -696632 sc-eQTL 8.26e-01 -0.0193 0.0876 0.301 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -834684 sc-eQTL 1.16e-01 0.149 0.0943 0.306 B_Activated L2
ENSG00000013503 POLR3B -98883 sc-eQTL 4.04e-01 -0.078 0.0933 0.306 B_Activated L2
ENSG00000111785 RIC8B -515756 sc-eQTL 2.14e-01 0.118 0.0944 0.306 B_Activated L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 6.29e-01 0.0356 0.0737 0.306 B_Activated L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 3.86e-01 -0.0771 0.0887 0.306 B_Activated L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 6.36e-01 -0.047 0.099 0.306 B_Activated L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 5.38e-01 -0.061 0.0988 0.306 B_Activated L2
ENSG00000008405 CRY1 -834684 sc-eQTL 2.41e-01 -0.103 0.0874 0.3 B_Intermediate L2
ENSG00000013503 POLR3B -98883 sc-eQTL 3.37e-01 -0.0929 0.0966 0.3 B_Intermediate L2
ENSG00000111785 RIC8B -515756 sc-eQTL 2.49e-01 0.099 0.0856 0.3 B_Intermediate L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 2.02e-01 0.118 0.0919 0.3 B_Intermediate L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 8.70e-01 -0.0117 0.0716 0.3 B_Intermediate L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 6.77e-01 0.0382 0.0917 0.3 B_Intermediate L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 9.33e-01 -0.00704 0.0832 0.3 B_Intermediate L2
ENSG00000008405 CRY1 -834684 sc-eQTL 9.83e-01 -0.00193 0.0913 0.304 B_Memory L2
ENSG00000013503 POLR3B -98883 sc-eQTL 6.39e-02 -0.178 0.0955 0.304 B_Memory L2
ENSG00000111785 RIC8B -515756 sc-eQTL 7.40e-01 -0.0301 0.0906 0.304 B_Memory L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 7.23e-01 0.029 0.0817 0.304 B_Memory L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 7.15e-01 -0.0297 0.0813 0.304 B_Memory L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 8.61e-01 -0.0162 0.0924 0.304 B_Memory L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 5.50e-01 -0.0485 0.081 0.304 B_Memory L2
ENSG00000008405 CRY1 -834684 sc-eQTL 4.31e-01 -0.0628 0.0796 0.301 B_Naive1 L2
ENSG00000013503 POLR3B -98883 sc-eQTL 9.37e-01 0.00708 0.0895 0.301 B_Naive1 L2
ENSG00000111785 RIC8B -515756 sc-eQTL 1.70e-01 0.12 0.087 0.301 B_Naive1 L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 4.21e-01 -0.0772 0.0958 0.301 B_Naive1 L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 6.52e-02 0.124 0.0669 0.301 B_Naive1 L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 7.53e-01 -0.0299 0.0949 0.301 B_Naive1 L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 1.48e-01 0.0955 0.0659 0.301 B_Naive1 L2
ENSG00000008405 CRY1 -834684 sc-eQTL 4.73e-01 0.0687 0.0955 0.303 B_Naive2 L2
ENSG00000013503 POLR3B -98883 sc-eQTL 8.43e-01 -0.0191 0.0964 0.303 B_Naive2 L2
ENSG00000111785 RIC8B -515756 sc-eQTL 5.60e-01 -0.0499 0.0856 0.303 B_Naive2 L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 5.41e-01 0.0596 0.0973 0.303 B_Naive2 L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 1.32e-01 -0.126 0.0832 0.303 B_Naive2 L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 1.39e-01 0.143 0.0965 0.303 B_Naive2 L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 1.57e-01 0.101 0.071 0.303 B_Naive2 L2
ENSG00000008405 CRY1 -834684 sc-eQTL 1.66e-01 -0.104 0.075 0.298 CD4_CTL L2
ENSG00000013503 POLR3B -98883 sc-eQTL 9.25e-01 0.00862 0.0916 0.298 CD4_CTL L2
ENSG00000111785 RIC8B -515756 sc-eQTL 2.91e-01 -0.102 0.0962 0.298 CD4_CTL L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 8.65e-01 0.0157 0.0922 0.298 CD4_CTL L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 1.22e-01 0.117 0.0752 0.298 CD4_CTL L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 7.68e-01 0.0289 0.0979 0.298 CD4_CTL L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 9.45e-01 -0.00664 0.0955 0.298 CD4_CTL L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 2.00e-01 -0.105 0.0818 0.298 CD4_CTL L2
ENSG00000008405 CRY1 -834684 sc-eQTL 2.30e-01 0.0567 0.0472 0.301 CD4_Naive L2
ENSG00000013503 POLR3B -98883 sc-eQTL 9.70e-01 -0.00268 0.0719 0.301 CD4_Naive L2
ENSG00000111785 RIC8B -515756 sc-eQTL 3.51e-01 -0.0635 0.0679 0.301 CD4_Naive L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 5.05e-01 0.0604 0.0903 0.301 CD4_Naive L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 1.36e-01 0.0919 0.0614 0.301 CD4_Naive L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 9.86e-01 -0.00118 0.0662 0.301 CD4_Naive L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 2.40e-01 0.0726 0.0616 0.301 CD4_Naive L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 1.16e-01 -0.146 0.0929 0.301 CD4_Naive L2
ENSG00000008405 CRY1 -834684 sc-eQTL 9.45e-01 -0.00409 0.0587 0.301 CD4_TCM L2
ENSG00000013503 POLR3B -98883 sc-eQTL 6.48e-01 -0.0369 0.0807 0.301 CD4_TCM L2
ENSG00000111785 RIC8B -515756 sc-eQTL 3.90e-01 0.0725 0.0842 0.301 CD4_TCM L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 2.82e-01 -0.105 0.0968 0.301 CD4_TCM L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 3.57e-01 0.0547 0.0592 0.301 CD4_TCM L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 5.92e-01 0.0433 0.0807 0.301 CD4_TCM L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 1.84e-02 0.153 0.0644 0.301 CD4_TCM L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 4.91e-01 -0.0675 0.0977 0.301 CD4_TCM L2
ENSG00000008405 CRY1 -834684 sc-eQTL 7.83e-02 0.138 0.0782 0.301 CD4_TEM L2
ENSG00000013503 POLR3B -98883 sc-eQTL 1.37e-01 0.147 0.0982 0.301 CD4_TEM L2
ENSG00000111785 RIC8B -515756 sc-eQTL 5.76e-01 0.0506 0.0903 0.301 CD4_TEM L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 6.82e-01 0.0396 0.0965 0.301 CD4_TEM L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 4.02e-01 0.0649 0.0774 0.301 CD4_TEM L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 1.91e-01 -0.116 0.0886 0.301 CD4_TEM L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 4.31e-01 -0.061 0.0774 0.301 CD4_TEM L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 8.21e-01 -0.0211 0.0933 0.301 CD4_TEM L2
ENSG00000008405 CRY1 -834684 sc-eQTL 4.84e-01 0.0422 0.0602 0.301 CD8_CTL L2
ENSG00000013503 POLR3B -98883 sc-eQTL 2.97e-01 0.0947 0.0905 0.301 CD8_CTL L2
ENSG00000111785 RIC8B -515756 sc-eQTL 8.80e-01 0.0129 0.0853 0.301 CD8_CTL L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 2.06e-01 0.119 0.094 0.301 CD8_CTL L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 6.95e-03 0.217 0.0794 0.301 CD8_CTL L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 4.69e-01 0.0565 0.0778 0.301 CD8_CTL L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 4.66e-01 0.0632 0.0866 0.301 CD8_CTL L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 7.43e-02 -0.171 0.0954 0.301 CD8_CTL L2
ENSG00000008405 CRY1 -834684 sc-eQTL 9.35e-01 -0.00558 0.0682 0.301 CD8_Naive L2
ENSG00000013503 POLR3B -98883 sc-eQTL 7.48e-02 -0.147 0.0822 0.301 CD8_Naive L2
ENSG00000111785 RIC8B -515756 sc-eQTL 7.88e-01 -0.0237 0.0882 0.301 CD8_Naive L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 3.24e-03 0.264 0.0886 0.301 CD8_Naive L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 5.02e-01 0.0496 0.0737 0.301 CD8_Naive L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 4.91e-01 0.0542 0.0785 0.301 CD8_Naive L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 9.55e-01 0.00368 0.0659 0.301 CD8_Naive L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 7.68e-01 -0.0275 0.093 0.301 CD8_Naive L2
ENSG00000008405 CRY1 -834684 sc-eQTL 9.02e-01 0.0101 0.0818 0.31 CD8_TCM L2
ENSG00000013503 POLR3B -98883 sc-eQTL 3.10e-02 0.209 0.0962 0.31 CD8_TCM L2
ENSG00000111785 RIC8B -515756 sc-eQTL 3.89e-01 -0.0805 0.0933 0.31 CD8_TCM L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 7.24e-01 0.0331 0.0939 0.31 CD8_TCM L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 1.36e-01 0.126 0.0844 0.31 CD8_TCM L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 4.16e-01 0.0789 0.0968 0.31 CD8_TCM L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 7.90e-01 0.0218 0.0819 0.31 CD8_TCM L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 4.06e-01 -0.0737 0.0885 0.31 CD8_TCM L2
ENSG00000008405 CRY1 -834684 sc-eQTL 4.98e-01 -0.0572 0.0842 0.306 CD8_TEM L2
ENSG00000013503 POLR3B -98883 sc-eQTL 6.98e-01 0.0372 0.0955 0.306 CD8_TEM L2
ENSG00000111785 RIC8B -515756 sc-eQTL 5.29e-01 0.0575 0.0913 0.306 CD8_TEM L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 1.51e-01 -0.137 0.0953 0.306 CD8_TEM L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 3.35e-01 -0.0847 0.0877 0.306 CD8_TEM L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 6.18e-01 0.048 0.0961 0.306 CD8_TEM L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 4.72e-01 -0.066 0.0915 0.306 CD8_TEM L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 6.67e-02 0.155 0.0839 0.306 CD8_TEM L2
ENSG00000008405 CRY1 -834684 sc-eQTL 3.14e-01 0.0741 0.0734 0.305 MAIT L2
ENSG00000013503 POLR3B -98883 sc-eQTL 5.20e-01 -0.0597 0.0926 0.305 MAIT L2
ENSG00000111785 RIC8B -515756 sc-eQTL 3.03e-01 -0.0848 0.0821 0.305 MAIT L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 8.41e-01 0.0181 0.0899 0.305 MAIT L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 9.59e-02 0.138 0.0826 0.305 MAIT L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 5.46e-01 0.0588 0.0972 0.305 MAIT L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 9.71e-01 0.00304 0.0847 0.305 MAIT L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 9.27e-01 -0.0083 0.0911 0.305 MAIT L2
ENSG00000008405 CRY1 -834684 sc-eQTL 4.57e-01 0.0543 0.0729 0.302 NK_CD56bright L2
ENSG00000013503 POLR3B -98883 sc-eQTL 5.13e-01 -0.0605 0.0922 0.302 NK_CD56bright L2
ENSG00000074590 NUAK1 118832 sc-eQTL 1.80e-01 0.108 0.0802 0.302 NK_CD56bright L2
ENSG00000111785 RIC8B -515756 sc-eQTL 3.26e-01 0.0984 0.0999 0.302 NK_CD56bright L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 7.42e-01 0.0309 0.0937 0.302 NK_CD56bright L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 9.11e-03 0.196 0.0743 0.302 NK_CD56bright L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 6.69e-01 0.0401 0.0935 0.302 NK_CD56bright L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 8.22e-01 0.0218 0.0964 0.302 NK_CD56bright L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 9.76e-01 -0.00281 0.0923 0.302 NK_CD56bright L2
ENSG00000008405 CRY1 -834684 sc-eQTL 3.73e-01 0.049 0.0549 0.297 NK_CD56dim L2
ENSG00000013503 POLR3B -98883 sc-eQTL 4.66e-01 -0.0601 0.0824 0.297 NK_CD56dim L2
ENSG00000074590 NUAK1 118832 sc-eQTL 6.31e-01 0.0388 0.0806 0.297 NK_CD56dim L2
ENSG00000111785 RIC8B -515756 sc-eQTL 2.54e-01 0.0941 0.0823 0.297 NK_CD56dim L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 2.28e-01 0.0989 0.0817 0.297 NK_CD56dim L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 5.18e-04 0.284 0.0804 0.297 NK_CD56dim L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 9.59e-01 -0.00441 0.0855 0.297 NK_CD56dim L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 6.84e-02 0.132 0.072 0.297 NK_CD56dim L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 1.37e-01 0.142 0.095 0.297 NK_CD56dim L2
ENSG00000008405 CRY1 -834684 sc-eQTL 1.25e-01 0.12 0.078 0.295 NK_HLA L2
ENSG00000013503 POLR3B -98883 sc-eQTL 8.38e-01 -0.0194 0.0949 0.295 NK_HLA L2
ENSG00000074590 NUAK1 118832 sc-eQTL 5.95e-01 -0.0492 0.0925 0.295 NK_HLA L2
ENSG00000111785 RIC8B -515756 sc-eQTL 1.75e-02 -0.23 0.0958 0.295 NK_HLA L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 8.54e-01 -0.0181 0.0984 0.295 NK_HLA L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 1.76e-02 0.202 0.0842 0.295 NK_HLA L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 8.39e-01 -0.0199 0.0979 0.295 NK_HLA L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 7.72e-01 0.0278 0.0961 0.295 NK_HLA L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 9.03e-01 0.011 0.0901 0.295 NK_HLA L2
ENSG00000008405 CRY1 -834684 sc-eQTL 4.62e-01 0.0473 0.0642 0.297 NK_cytokine L2
ENSG00000013503 POLR3B -98883 sc-eQTL 4.17e-01 -0.0748 0.0921 0.297 NK_cytokine L2
ENSG00000074590 NUAK1 118832 sc-eQTL 4.01e-01 -0.0715 0.085 0.297 NK_cytokine L2
ENSG00000111785 RIC8B -515756 sc-eQTL 4.38e-01 -0.0679 0.0873 0.297 NK_cytokine L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 2.50e-01 -0.103 0.089 0.297 NK_cytokine L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 3.29e-03 0.246 0.0826 0.297 NK_cytokine L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 3.70e-01 0.0822 0.0915 0.297 NK_cytokine L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 4.81e-01 0.0532 0.0753 0.297 NK_cytokine L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 5.15e-01 -0.061 0.0935 0.297 NK_cytokine L2
ENSG00000008405 CRY1 -834684 sc-eQTL 1.61e-02 0.271 0.111 0.3 PB L2
ENSG00000013503 POLR3B -98883 sc-eQTL 5.22e-01 0.0787 0.122 0.3 PB L2
ENSG00000111785 RIC8B -515756 sc-eQTL 1.55e-01 0.156 0.109 0.3 PB L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 9.76e-01 0.00312 0.103 0.3 PB L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 5.90e-01 -0.0372 0.0688 0.3 PB L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 2.14e-01 -0.109 0.0875 0.3 PB L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 1.75e-03 0.353 0.11 0.3 PB L2
ENSG00000008405 CRY1 -834684 sc-eQTL 9.63e-01 0.00312 0.0664 0.3 Pro_T L2
ENSG00000013503 POLR3B -98883 sc-eQTL 2.85e-01 0.103 0.0957 0.3 Pro_T L2
ENSG00000111785 RIC8B -515756 sc-eQTL 8.61e-01 0.0158 0.0903 0.3 Pro_T L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 9.68e-01 -0.00359 0.0906 0.3 Pro_T L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 6.12e-01 -0.0255 0.0501 0.3 Pro_T L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 7.13e-01 -0.0309 0.0838 0.3 Pro_T L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 4.65e-01 -0.0566 0.0773 0.3 Pro_T L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 5.83e-01 0.044 0.08 0.3 Pro_T L2
ENSG00000008405 CRY1 -834684 sc-eQTL 8.50e-01 0.0149 0.0789 0.301 Treg L2
ENSG00000013503 POLR3B -98883 sc-eQTL 4.35e-01 0.0731 0.0935 0.301 Treg L2
ENSG00000111785 RIC8B -515756 sc-eQTL 1.00e-01 0.146 0.0887 0.301 Treg L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 8.75e-01 0.0153 0.0967 0.301 Treg L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 2.25e-01 0.0838 0.0689 0.301 Treg L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 9.04e-01 0.0108 0.0896 0.301 Treg L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 1.99e-01 -0.0956 0.0743 0.301 Treg L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 7.40e-01 0.0292 0.0879 0.301 Treg L2
ENSG00000008405 CRY1 -834684 sc-eQTL 1.25e-01 -0.142 0.0923 0.315 cDC L2
ENSG00000013503 POLR3B -98883 sc-eQTL 5.92e-01 -0.048 0.0893 0.315 cDC L2
ENSG00000111785 RIC8B -515756 sc-eQTL 5.72e-01 0.0535 0.0944 0.315 cDC L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 5.93e-01 0.0435 0.0812 0.315 cDC L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 3.57e-01 0.0612 0.0663 0.315 cDC L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 6.35e-01 0.0414 0.087 0.315 cDC L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 3.56e-01 0.0914 0.0988 0.315 cDC L2
ENSG00000008405 CRY1 -834684 sc-eQTL 5.64e-01 -0.0457 0.0791 0.301 cMono_IL1B L2
ENSG00000013503 POLR3B -98883 sc-eQTL 9.91e-02 -0.147 0.0888 0.301 cMono_IL1B L2
ENSG00000111785 RIC8B -515756 sc-eQTL 1.84e-01 0.108 0.0807 0.301 cMono_IL1B L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 6.91e-01 0.0244 0.0612 0.301 cMono_IL1B L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 6.72e-01 -0.031 0.073 0.301 cMono_IL1B L2
ENSG00000008405 CRY1 -834684 sc-eQTL 3.19e-02 -0.197 0.0912 0.301 cMono_S100A L2
ENSG00000013503 POLR3B -98883 sc-eQTL 1.72e-03 -0.285 0.0898 0.301 cMono_S100A L2
ENSG00000111785 RIC8B -515756 sc-eQTL 4.45e-01 0.0649 0.0849 0.301 cMono_S100A L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 2.13e-02 0.154 0.0663 0.301 cMono_S100A L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 9.72e-01 -0.00274 0.0788 0.301 cMono_S100A L2
ENSG00000008405 CRY1 -834684 sc-eQTL 1.98e-01 -0.13 0.101 0.318 gdT L2
ENSG00000013503 POLR3B -98883 sc-eQTL 6.29e-01 0.0513 0.106 0.318 gdT L2
ENSG00000111785 RIC8B -515756 sc-eQTL 5.85e-01 -0.0589 0.108 0.318 gdT L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 2.94e-01 0.121 0.115 0.318 gdT L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 7.72e-01 -0.0293 0.101 0.318 gdT L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 8.63e-01 -0.0182 0.106 0.318 gdT L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 3.91e-01 -0.0944 0.11 0.318 gdT L2
ENSG00000260329 AC007541.1 -696632 sc-eQTL 3.97e-01 0.089 0.105 0.318 gdT L2
ENSG00000008405 CRY1 -834684 sc-eQTL 2.64e-01 0.102 0.0914 0.307 intMono L2
ENSG00000013503 POLR3B -98883 sc-eQTL 7.88e-01 -0.024 0.089 0.307 intMono L2
ENSG00000111785 RIC8B -515756 sc-eQTL 3.95e-01 -0.074 0.0869 0.307 intMono L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 7.05e-01 -0.0344 0.0907 0.307 intMono L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 3.65e-02 -0.212 0.101 0.307 intMono L2
ENSG00000008405 CRY1 -834684 sc-eQTL 1.73e-01 -0.0898 0.0656 0.308 ncMono L2
ENSG00000013503 POLR3B -98883 sc-eQTL 8.38e-01 -0.0173 0.0849 0.308 ncMono L2
ENSG00000111785 RIC8B -515756 sc-eQTL 7.00e-01 -0.0318 0.0824 0.308 ncMono L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 6.07e-01 -0.0452 0.0879 0.308 ncMono L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 8.74e-01 -0.0137 0.0864 0.308 ncMono L2
ENSG00000008405 CRY1 -834684 sc-eQTL 1.37e-01 -0.143 0.0955 0.305 pDC L2
ENSG00000013503 POLR3B -98883 sc-eQTL 3.40e-01 0.1 0.105 0.305 pDC L2
ENSG00000111785 RIC8B -515756 sc-eQTL 8.86e-01 -0.0146 0.101 0.305 pDC L2
ENSG00000120832 MTERF2 -728295 sc-eQTL 9.72e-02 0.157 0.0941 0.305 pDC L2
ENSG00000136026 CKAP4 -45414 sc-eQTL 8.74e-01 -0.0107 0.0673 0.305 pDC L2
ENSG00000151135 TMEM263 -696854 sc-eQTL 3.14e-02 0.23 0.106 0.305 pDC L2
ENSG00000166046 TCP11L2 -43064 sc-eQTL 8.65e-01 -0.0172 0.101 0.305 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -834684 sc-eQTL 2.87e-01 -0.0886 0.083 0.301 B_Memory LOneK1K
ENSG00000013503 POLR3B -98883 sc-eQTL 5.95e-02 -0.18 0.0952 0.301 B_Memory LOneK1K
ENSG00000111785 RIC8B -515756 sc-eQTL 3.16e-01 0.0827 0.0823 0.301 B_Memory LOneK1K
ENSG00000120832 MTERF2 -728295 sc-eQTL 2.36e-01 0.11 0.093 0.301 B_Memory LOneK1K
ENSG00000136026 CKAP4 -45414 sc-eQTL 9.18e-01 -0.00666 0.0649 0.301 B_Memory LOneK1K
ENSG00000151135 TMEM263 -696854 sc-eQTL 8.07e-01 -0.0223 0.0911 0.301 B_Memory LOneK1K
ENSG00000166046 TCP11L2 -43064 sc-eQTL 4.50e-01 -0.0593 0.0785 0.301 B_Memory LOneK1K
ENSG00000008405 CRY1 -834684 sc-eQTL 8.41e-01 -0.0145 0.0722 0.301 B_Naive LOneK1K
ENSG00000013503 POLR3B -98883 sc-eQTL 7.92e-01 -0.0239 0.0905 0.301 B_Naive LOneK1K
ENSG00000111785 RIC8B -515756 sc-eQTL 3.14e-01 0.0891 0.0883 0.301 B_Naive LOneK1K
ENSG00000120832 MTERF2 -728295 sc-eQTL 9.85e-01 -0.00186 0.0968 0.301 B_Naive LOneK1K
ENSG00000136026 CKAP4 -45414 sc-eQTL 3.96e-01 0.0572 0.0673 0.301 B_Naive LOneK1K
ENSG00000151135 TMEM263 -696854 sc-eQTL 5.22e-01 0.0586 0.0912 0.301 B_Naive LOneK1K
ENSG00000166046 TCP11L2 -43064 sc-eQTL 1.99e-01 0.0755 0.0586 0.301 B_Naive LOneK1K
ENSG00000008405 CRY1 -834684 sc-eQTL 6.54e-02 -0.14 0.0754 0.301 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -98883 sc-eQTL 8.77e-03 -0.219 0.0828 0.301 CD14_Mono LOneK1K
ENSG00000111785 RIC8B -515756 sc-eQTL 1.05e-01 0.126 0.0775 0.301 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 -45414 sc-eQTL 2.42e-01 0.0685 0.0584 0.301 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 -43064 sc-eQTL 6.72e-01 -0.0264 0.0622 0.301 CD14_Mono LOneK1K
ENSG00000008405 CRY1 -834684 sc-eQTL 6.76e-01 -0.0275 0.0658 0.302 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -98883 sc-eQTL 8.77e-01 -0.0124 0.08 0.302 CD16_Mono LOneK1K
ENSG00000111785 RIC8B -515756 sc-eQTL 2.51e-01 -0.0875 0.076 0.302 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 -45414 sc-eQTL 6.30e-01 0.0381 0.0789 0.302 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 -43064 sc-eQTL 2.33e-01 -0.0975 0.0815 0.302 CD16_Mono LOneK1K
ENSG00000008405 CRY1 -834684 sc-eQTL 7.08e-01 0.0174 0.0465 0.297 NK_CD56dim LOneK1K
ENSG00000013503 POLR3B -98883 sc-eQTL 9.36e-02 -0.141 0.0838 0.297 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 118832 sc-eQTL 8.02e-01 -0.0204 0.0812 0.297 NK_CD56dim LOneK1K
ENSG00000111785 RIC8B -515756 sc-eQTL 9.03e-01 -0.00952 0.0778 0.297 NK_CD56dim LOneK1K
ENSG00000120832 MTERF2 -728295 sc-eQTL 8.63e-01 0.0139 0.0807 0.297 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 -45414 sc-eQTL 2.57e-04 0.278 0.0747 0.297 NK_CD56dim LOneK1K
ENSG00000151135 TMEM263 -696854 sc-eQTL 3.60e-01 0.0749 0.0815 0.297 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 -43064 sc-eQTL 1.34e-01 0.0988 0.0656 0.297 NK_CD56dim LOneK1K
ENSG00000260329 AC007541.1 -696632 sc-eQTL 4.57e-01 0.0709 0.0952 0.297 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111785 RIC8B -515756 eQTL 0.015 0.029 0.0119 0.0 0.0 0.34
ENSG00000136026 CKAP4 -45414 pQTL 1.15e-16 -0.115 0.0137 0.0 0.0 0.332
ENSG00000136026 CKAP4 -45414 eQTL 0.00111 0.0354 0.0108 0.00523 0.0 0.34
ENSG00000277715 AC079174.2 8106 eQTL 4.43e-06 0.0773 0.0168 0.0 0.126 0.34

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000277715 AC079174.2 8106 2.93e-05 3.08e-05 5.11e-06 1.44e-05 4.7e-06 1.28e-05 3.87e-05 3.95e-06 2.64e-05 1.31e-05 3.39e-05 1.46e-05 4.4e-05 1.24e-05 6.27e-06 1.54e-05 1.48e-05 2.14e-05 7.51e-06 5.63e-06 1.25e-05 2.74e-05 2.78e-05 7.77e-06 3.87e-05 6.43e-06 1.14e-05 1.09e-05 2.85e-05 2.23e-05 1.76e-05 1.63e-06 2.24e-06 6.27e-06 1.03e-05 5.11e-06 2.72e-06 2.98e-06 3.99e-06 2.9e-06 1.63e-06 3.49e-05 2.92e-06 3.18e-07 2.11e-06 3.36e-06 3.8e-06 1.41e-06 1.46e-06