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Genes within 1Mb (chr12:105854491:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -503257 sc-eQTL 8.65e-01 0.0364 0.213 0.051 CD8_TCM L2
ENSG00000111785 RIC8B -920130 sc-eQTL 6.84e-02 0.371 0.203 0.051 CD8_TCM L2
ENSG00000136026 CKAP4 -449788 sc-eQTL 5.07e-01 -0.123 0.185 0.051 CD8_TCM L2
ENSG00000136044 APPL2 618288 sc-eQTL 1.79e-01 0.281 0.208 0.051 CD8_TCM L2
ENSG00000136051 WASHC4 747167 sc-eQTL 6.27e-01 -0.102 0.21 0.051 CD8_TCM L2
ENSG00000151131 C12orf45 868175 sc-eQTL 6.24e-01 0.11 0.224 0.051 CD8_TCM L2
ENSG00000166046 TCP11L2 -447438 sc-eQTL 3.97e-01 0.152 0.179 0.051 CD8_TCM L2
ENSG00000235162 C12orf75 619201 sc-eQTL 7.53e-01 -0.0625 0.198 0.051 CD8_TCM L2
ENSG00000013503 POLR3B -503257 sc-eQTL 4.11e-01 -0.155 0.188 0.054 cDC L2
ENSG00000111785 RIC8B -920130 sc-eQTL 4.85e-01 0.139 0.199 0.054 cDC L2
ENSG00000136026 CKAP4 -449788 sc-eQTL 1.16e-01 -0.22 0.139 0.054 cDC L2
ENSG00000136044 APPL2 618288 sc-eQTL 5.91e-01 -0.107 0.199 0.054 cDC L2
ENSG00000136051 WASHC4 747167 sc-eQTL 4.39e-03 -0.5 0.173 0.054 cDC L2
ENSG00000136052 SLC41A2 895747 sc-eQTL 2.64e-01 -0.173 0.154 0.054 cDC L2
ENSG00000151131 C12orf45 868175 sc-eQTL 3.90e-01 0.118 0.137 0.054 cDC L2
ENSG00000166046 TCP11L2 -447438 sc-eQTL 2.71e-02 0.458 0.206 0.054 cDC L2
ENSG00000235162 C12orf75 619201 sc-eQTL 4.95e-01 0.102 0.149 0.054 cDC L2
ENSG00000013503 POLR3B -503257 sc-eQTL 2.42e-01 -0.279 0.237 0.052 gdT L2
ENSG00000111785 RIC8B -920130 sc-eQTL 6.19e-01 -0.12 0.242 0.052 gdT L2
ENSG00000136026 CKAP4 -449788 sc-eQTL 6.70e-01 -0.097 0.227 0.052 gdT L2
ENSG00000136044 APPL2 618288 sc-eQTL 1.85e-01 0.298 0.224 0.052 gdT L2
ENSG00000136051 WASHC4 747167 sc-eQTL 4.26e-02 -0.535 0.262 0.052 gdT L2
ENSG00000151131 C12orf45 868175 sc-eQTL 7.43e-01 0.0869 0.264 0.052 gdT L2
ENSG00000166046 TCP11L2 -447438 sc-eQTL 7.49e-01 -0.0792 0.247 0.052 gdT L2
ENSG00000235162 C12orf75 619201 sc-eQTL 9.33e-02 0.35 0.207 0.052 gdT L2
ENSG00000013503 POLR3B -503257 sc-eQTL 3.50e-01 -0.205 0.219 0.051 pDC L2
ENSG00000111785 RIC8B -920130 sc-eQTL 5.68e-01 -0.121 0.212 0.051 pDC L2
ENSG00000136026 CKAP4 -449788 sc-eQTL 9.75e-01 0.00438 0.141 0.051 pDC L2
ENSG00000136044 APPL2 618288 sc-eQTL 7.75e-01 0.0621 0.217 0.051 pDC L2
ENSG00000136051 WASHC4 747167 sc-eQTL 3.66e-01 0.186 0.205 0.051 pDC L2
ENSG00000136052 SLC41A2 895747 sc-eQTL 4.57e-02 -0.318 0.158 0.051 pDC L2
ENSG00000151131 C12orf45 868175 sc-eQTL 8.06e-01 0.0343 0.139 0.051 pDC L2
ENSG00000166046 TCP11L2 -447438 sc-eQTL 3.68e-02 0.44 0.209 0.051 pDC L2
ENSG00000235162 C12orf75 619201 sc-eQTL 2.08e-01 -0.169 0.134 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136026 CKAP4 -449788 pQTL 0.0457 -0.055 0.0275 0.0 0.0 0.0589

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000277715 \N -396268 1.31e-06 8.23e-07 2.81e-07 4.25e-07 1.4e-07 3.26e-07 7.25e-07 2.84e-07 8.66e-07 2.69e-07 1.07e-06 5.69e-07 1.22e-06 2.06e-07 4.15e-07 5.02e-07 6.67e-07 5.31e-07 3.74e-07 3.06e-07 2.54e-07 6.48e-07 5.67e-07 3.62e-07 1.42e-06 2.47e-07 5.24e-07 4.11e-07 7.07e-07 8.5e-07 4.61e-07 3.28e-08 9.89e-08 2.87e-07 3.35e-07 2.78e-07 2.14e-07 1.26e-07 8.45e-08 1.79e-08 1.43e-07 9.49e-07 7.23e-08 5.54e-09 1.89e-07 4.23e-08 1.62e-07 4.47e-08 5.84e-08