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Genes within 1Mb (chr12:105769729:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -588019 sc-eQTL 3.91e-01 -0.0664 0.0772 0.434 B L1
ENSG00000136026 CKAP4 -534550 sc-eQTL 6.69e-01 0.0171 0.04 0.434 B L1
ENSG00000136044 APPL2 533526 sc-eQTL 7.81e-01 0.0163 0.0588 0.434 B L1
ENSG00000136051 WASHC4 662405 sc-eQTL 1.06e-01 -0.0604 0.0372 0.434 B L1
ENSG00000136052 SLC41A2 810985 sc-eQTL 8.04e-01 0.0148 0.0597 0.434 B L1
ENSG00000151131 C12orf45 783413 sc-eQTL 4.86e-01 0.0503 0.0721 0.434 B L1
ENSG00000166046 TCP11L2 -532200 sc-eQTL 6.38e-01 -0.0226 0.048 0.434 B L1
ENSG00000235162 C12orf75 534439 sc-eQTL 9.05e-01 -0.00616 0.0514 0.434 B L1
ENSG00000013503 POLR3B -588019 sc-eQTL 7.14e-02 -0.103 0.0567 0.434 CD4T L1
ENSG00000136026 CKAP4 -534550 sc-eQTL 8.50e-01 -0.00926 0.0488 0.434 CD4T L1
ENSG00000136044 APPL2 533526 sc-eQTL 9.23e-01 0.00542 0.0562 0.434 CD4T L1
ENSG00000136051 WASHC4 662405 sc-eQTL 6.55e-01 0.0248 0.0554 0.434 CD4T L1
ENSG00000151131 C12orf45 783413 sc-eQTL 6.72e-01 -0.0325 0.0766 0.434 CD4T L1
ENSG00000166046 TCP11L2 -532200 sc-eQTL 5.87e-01 -0.027 0.0496 0.434 CD4T L1
ENSG00000235162 C12orf75 534439 sc-eQTL 2.86e-01 0.0457 0.0428 0.434 CD4T L1
ENSG00000013503 POLR3B -588019 sc-eQTL 1.38e-01 0.1 0.0672 0.434 CD8T L1
ENSG00000136026 CKAP4 -534550 sc-eQTL 9.84e-01 0.000897 0.0447 0.434 CD8T L1
ENSG00000136044 APPL2 533526 sc-eQTL 7.56e-01 0.0199 0.0639 0.434 CD8T L1
ENSG00000136051 WASHC4 662405 sc-eQTL 6.22e-01 0.0352 0.0714 0.434 CD8T L1
ENSG00000151131 C12orf45 783413 sc-eQTL 9.65e-01 0.00285 0.0646 0.434 CD8T L1
ENSG00000166046 TCP11L2 -532200 sc-eQTL 7.56e-01 -0.0123 0.0396 0.434 CD8T L1
ENSG00000235162 C12orf75 534439 sc-eQTL 3.26e-01 0.0279 0.0283 0.434 CD8T L1
ENSG00000013503 POLR3B -588019 sc-eQTL 5.71e-01 0.0462 0.0815 0.439 DC L1
ENSG00000136026 CKAP4 -534550 sc-eQTL 7.74e-01 -0.0161 0.0561 0.439 DC L1
ENSG00000136044 APPL2 533526 sc-eQTL 8.31e-01 -0.0179 0.0837 0.439 DC L1
ENSG00000136051 WASHC4 662405 sc-eQTL 7.64e-01 -0.0203 0.0675 0.439 DC L1
ENSG00000136052 SLC41A2 810985 sc-eQTL 6.42e-02 0.106 0.0568 0.439 DC L1
ENSG00000151131 C12orf45 783413 sc-eQTL 2.01e-01 0.0655 0.051 0.439 DC L1
ENSG00000166046 TCP11L2 -532200 sc-eQTL 9.42e-01 -0.00612 0.0843 0.439 DC L1
ENSG00000235162 C12orf75 534439 sc-eQTL 9.82e-01 0.000794 0.0344 0.439 DC L1
ENSG00000013503 POLR3B -588019 sc-eQTL 8.06e-01 -0.0166 0.0674 0.434 Mono L1
ENSG00000136026 CKAP4 -534550 sc-eQTL 3.76e-01 -0.0428 0.0482 0.434 Mono L1
ENSG00000136044 APPL2 533526 sc-eQTL 6.96e-01 0.0299 0.0764 0.434 Mono L1
ENSG00000136051 WASHC4 662405 sc-eQTL 9.11e-01 -0.00419 0.0376 0.434 Mono L1
ENSG00000151131 C12orf45 783413 sc-eQTL 5.98e-02 -0.124 0.0654 0.434 Mono L1
ENSG00000166046 TCP11L2 -532200 sc-eQTL 7.82e-01 -0.0156 0.0561 0.434 Mono L1
ENSG00000235162 C12orf75 534439 sc-eQTL 1.47e-01 0.106 0.0728 0.434 Mono L1
ENSG00000013503 POLR3B -588019 sc-eQTL 4.40e-01 0.0575 0.0744 0.433 NK L1
ENSG00000074590 NUAK1 -370304 sc-eQTL 6.86e-02 -0.133 0.0728 0.433 NK L1
ENSG00000136026 CKAP4 -534550 sc-eQTL 5.98e-01 0.0352 0.0666 0.433 NK L1
ENSG00000136044 APPL2 533526 sc-eQTL 6.93e-01 0.0259 0.0657 0.433 NK L1
ENSG00000136051 WASHC4 662405 sc-eQTL 7.44e-01 -0.0224 0.0686 0.433 NK L1
ENSG00000151131 C12orf45 783413 sc-eQTL 2.70e-01 -0.0929 0.084 0.433 NK L1
ENSG00000166046 TCP11L2 -532200 sc-eQTL 2.63e-01 -0.0679 0.0605 0.433 NK L1
ENSG00000235162 C12orf75 534439 sc-eQTL 2.22e-01 0.0607 0.0495 0.433 NK L1
ENSG00000013503 POLR3B -588019 sc-eQTL 5.97e-01 -0.0445 0.0839 0.434 Other_T L1
ENSG00000136026 CKAP4 -534550 sc-eQTL 7.91e-01 -0.014 0.0527 0.434 Other_T L1
ENSG00000136044 APPL2 533526 sc-eQTL 1.90e-01 0.0898 0.0684 0.434 Other_T L1
ENSG00000136051 WASHC4 662405 sc-eQTL 1.73e-01 -0.123 0.0897 0.434 Other_T L1
ENSG00000151131 C12orf45 783413 sc-eQTL 1.09e-01 -0.102 0.063 0.434 Other_T L1
ENSG00000166046 TCP11L2 -532200 sc-eQTL 2.70e-01 0.0713 0.0644 0.434 Other_T L1
ENSG00000235162 C12orf75 534439 sc-eQTL 8.42e-01 0.0105 0.0527 0.434 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -588019 sc-eQTL 2.62e-01 0.0992 0.0881 0.421 B_Activated L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 2.56e-01 -0.0955 0.0838 0.421 B_Activated L2
ENSG00000136044 APPL2 533526 sc-eQTL 9.97e-01 -0.000376 0.0948 0.421 B_Activated L2
ENSG00000136051 WASHC4 662405 sc-eQTL 5.27e-01 -0.0571 0.09 0.421 B_Activated L2
ENSG00000136052 SLC41A2 810985 sc-eQTL 5.71e-01 0.0382 0.0673 0.421 B_Activated L2
ENSG00000151131 C12orf45 783413 sc-eQTL 8.41e-01 -0.0188 0.0935 0.421 B_Activated L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 5.17e-01 0.0606 0.0935 0.421 B_Activated L2
ENSG00000235162 C12orf75 534439 sc-eQTL 1.61e-01 -0.127 0.0902 0.421 B_Activated L2
ENSG00000013503 POLR3B -588019 sc-eQTL 4.23e-01 0.0709 0.0883 0.436 B_Intermediate L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 6.96e-01 -0.0256 0.0655 0.436 B_Intermediate L2
ENSG00000136044 APPL2 533526 sc-eQTL 7.45e-02 0.139 0.0773 0.436 B_Intermediate L2
ENSG00000136051 WASHC4 662405 sc-eQTL 1.68e-01 -0.0927 0.067 0.436 B_Intermediate L2
ENSG00000136052 SLC41A2 810985 sc-eQTL 4.27e-01 -0.0588 0.0739 0.436 B_Intermediate L2
ENSG00000151131 C12orf45 783413 sc-eQTL 7.93e-01 -0.0225 0.0856 0.436 B_Intermediate L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 9.79e-01 -0.00197 0.0761 0.436 B_Intermediate L2
ENSG00000235162 C12orf75 534439 sc-eQTL 6.42e-01 -0.0371 0.0795 0.436 B_Intermediate L2
ENSG00000013503 POLR3B -588019 sc-eQTL 1.04e-01 -0.145 0.0888 0.435 B_Memory L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 5.81e-01 -0.0416 0.0754 0.435 B_Memory L2
ENSG00000136044 APPL2 533526 sc-eQTL 5.99e-01 -0.0429 0.0814 0.435 B_Memory L2
ENSG00000136051 WASHC4 662405 sc-eQTL 9.20e-01 -0.00675 0.0673 0.435 B_Memory L2
ENSG00000136052 SLC41A2 810985 sc-eQTL 8.36e-01 0.0163 0.079 0.435 B_Memory L2
ENSG00000151131 C12orf45 783413 sc-eQTL 6.16e-01 -0.0458 0.0911 0.435 B_Memory L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 3.49e-01 0.0704 0.075 0.435 B_Memory L2
ENSG00000235162 C12orf75 534439 sc-eQTL 4.88e-01 -0.048 0.0691 0.435 B_Memory L2
ENSG00000013503 POLR3B -588019 sc-eQTL 2.85e-01 -0.0854 0.0796 0.434 B_Naive1 L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 7.94e-01 0.0157 0.0601 0.434 B_Naive1 L2
ENSG00000136044 APPL2 533526 sc-eQTL 7.50e-01 -0.0215 0.0673 0.434 B_Naive1 L2
ENSG00000136051 WASHC4 662405 sc-eQTL 1.36e-01 -0.0901 0.0602 0.434 B_Naive1 L2
ENSG00000136052 SLC41A2 810985 sc-eQTL 8.45e-01 -0.0137 0.07 0.434 B_Naive1 L2
ENSG00000151131 C12orf45 783413 sc-eQTL 2.59e-01 0.0982 0.0867 0.434 B_Naive1 L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 4.02e-01 -0.0495 0.0589 0.434 B_Naive1 L2
ENSG00000235162 C12orf75 534439 sc-eQTL 3.04e-01 -0.0796 0.0773 0.434 B_Naive1 L2
ENSG00000013503 POLR3B -588019 sc-eQTL 1.86e-01 -0.115 0.0865 0.433 B_Naive2 L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 8.90e-01 0.0104 0.0754 0.433 B_Naive2 L2
ENSG00000136044 APPL2 533526 sc-eQTL 6.88e-01 0.029 0.0721 0.433 B_Naive2 L2
ENSG00000136051 WASHC4 662405 sc-eQTL 2.24e-01 0.0793 0.065 0.433 B_Naive2 L2
ENSG00000136052 SLC41A2 810985 sc-eQTL 6.96e-01 0.0267 0.0684 0.433 B_Naive2 L2
ENSG00000151131 C12orf45 783413 sc-eQTL 7.04e-01 0.0353 0.0926 0.433 B_Naive2 L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 9.99e-01 4.72e-05 0.0643 0.433 B_Naive2 L2
ENSG00000235162 C12orf75 534439 sc-eQTL 8.53e-01 0.0148 0.0799 0.433 B_Naive2 L2
ENSG00000013503 POLR3B -588019 sc-eQTL 2.95e-01 -0.0871 0.0829 0.439 CD4_CTL L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 9.06e-01 0.00813 0.0686 0.439 CD4_CTL L2
ENSG00000136044 APPL2 533526 sc-eQTL 5.94e-01 0.0456 0.0854 0.439 CD4_CTL L2
ENSG00000136051 WASHC4 662405 sc-eQTL 5.02e-01 -0.055 0.0818 0.439 CD4_CTL L2
ENSG00000151131 C12orf45 783413 sc-eQTL 1.23e-02 0.205 0.0812 0.439 CD4_CTL L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 2.48e-01 0.1 0.0864 0.439 CD4_CTL L2
ENSG00000235162 C12orf75 534439 sc-eQTL 9.58e-01 0.00259 0.0497 0.439 CD4_CTL L2
ENSG00000013503 POLR3B -588019 sc-eQTL 3.57e-02 -0.133 0.063 0.434 CD4_Naive L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 3.49e-01 -0.0513 0.0546 0.434 CD4_Naive L2
ENSG00000136044 APPL2 533526 sc-eQTL 9.31e-01 -0.00508 0.0583 0.434 CD4_Naive L2
ENSG00000136051 WASHC4 662405 sc-eQTL 7.16e-01 0.0209 0.0575 0.434 CD4_Naive L2
ENSG00000151131 C12orf45 783413 sc-eQTL 9.43e-01 -0.00601 0.0839 0.434 CD4_Naive L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 5.20e-01 -0.0353 0.0547 0.434 CD4_Naive L2
ENSG00000235162 C12orf75 534439 sc-eQTL 3.71e-01 -0.0669 0.0746 0.434 CD4_Naive L2
ENSG00000013503 POLR3B -588019 sc-eQTL 8.86e-01 0.0104 0.0725 0.434 CD4_TCM L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 7.44e-01 0.0174 0.0533 0.434 CD4_TCM L2
ENSG00000136044 APPL2 533526 sc-eQTL 9.82e-01 -0.00153 0.0693 0.434 CD4_TCM L2
ENSG00000136051 WASHC4 662405 sc-eQTL 9.00e-01 -0.00895 0.0714 0.434 CD4_TCM L2
ENSG00000151131 C12orf45 783413 sc-eQTL 4.52e-01 -0.0663 0.0881 0.434 CD4_TCM L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 4.36e-01 -0.0457 0.0585 0.434 CD4_TCM L2
ENSG00000235162 C12orf75 534439 sc-eQTL 4.57e-03 0.163 0.0569 0.434 CD4_TCM L2
ENSG00000013503 POLR3B -588019 sc-eQTL 7.29e-01 -0.0308 0.0888 0.434 CD4_TEM L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 5.70e-01 0.0396 0.0696 0.434 CD4_TEM L2
ENSG00000136044 APPL2 533526 sc-eQTL 8.78e-01 -0.0117 0.0763 0.434 CD4_TEM L2
ENSG00000136051 WASHC4 662405 sc-eQTL 3.99e-01 0.0727 0.0861 0.434 CD4_TEM L2
ENSG00000151131 C12orf45 783413 sc-eQTL 5.15e-01 -0.0544 0.0835 0.434 CD4_TEM L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 4.70e-01 -0.0504 0.0696 0.434 CD4_TEM L2
ENSG00000235162 C12orf75 534439 sc-eQTL 6.63e-01 -0.0244 0.0559 0.434 CD4_TEM L2
ENSG00000013503 POLR3B -588019 sc-eQTL 6.92e-01 0.0322 0.0813 0.434 CD8_CTL L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 7.16e-01 -0.0264 0.0724 0.434 CD8_CTL L2
ENSG00000136044 APPL2 533526 sc-eQTL 2.21e-01 0.0837 0.0682 0.434 CD8_CTL L2
ENSG00000136051 WASHC4 662405 sc-eQTL 7.38e-01 0.0254 0.0759 0.434 CD8_CTL L2
ENSG00000151131 C12orf45 783413 sc-eQTL 4.12e-01 -0.0736 0.0894 0.434 CD8_CTL L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 8.60e-01 0.0137 0.0778 0.434 CD8_CTL L2
ENSG00000235162 C12orf75 534439 sc-eQTL 9.25e-01 0.00542 0.0574 0.434 CD8_CTL L2
ENSG00000013503 POLR3B -588019 sc-eQTL 2.92e-01 0.0797 0.0753 0.434 CD8_Naive L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 7.80e-01 -0.0188 0.0674 0.434 CD8_Naive L2
ENSG00000136044 APPL2 533526 sc-eQTL 8.51e-01 -0.013 0.0692 0.434 CD8_Naive L2
ENSG00000136051 WASHC4 662405 sc-eQTL 2.12e-01 0.0936 0.0748 0.434 CD8_Naive L2
ENSG00000151131 C12orf45 783413 sc-eQTL 5.37e-01 0.0498 0.0806 0.434 CD8_Naive L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 4.64e-01 -0.044 0.0601 0.434 CD8_Naive L2
ENSG00000235162 C12orf75 534439 sc-eQTL 1.49e-01 0.0927 0.0641 0.434 CD8_Naive L2
ENSG00000013503 POLR3B -588019 sc-eQTL 2.38e-03 0.27 0.0877 0.435 CD8_TCM L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 7.40e-01 0.026 0.0783 0.435 CD8_TCM L2
ENSG00000136044 APPL2 533526 sc-eQTL 5.85e-01 -0.0481 0.088 0.435 CD8_TCM L2
ENSG00000136051 WASHC4 662405 sc-eQTL 4.17e-02 -0.18 0.0877 0.435 CD8_TCM L2
ENSG00000151131 C12orf45 783413 sc-eQTL 7.77e-01 -0.0268 0.0945 0.435 CD8_TCM L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 5.59e-01 0.0441 0.0755 0.435 CD8_TCM L2
ENSG00000235162 C12orf75 534439 sc-eQTL 9.00e-01 -0.0105 0.0835 0.435 CD8_TCM L2
ENSG00000013503 POLR3B -588019 sc-eQTL 9.10e-01 -0.00998 0.0882 0.443 CD8_TEM L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 7.51e-01 -0.0258 0.0811 0.443 CD8_TEM L2
ENSG00000136044 APPL2 533526 sc-eQTL 9.10e-01 0.0101 0.0894 0.443 CD8_TEM L2
ENSG00000136051 WASHC4 662405 sc-eQTL 1.85e-01 -0.122 0.092 0.443 CD8_TEM L2
ENSG00000151131 C12orf45 783413 sc-eQTL 8.25e-01 -0.02 0.0901 0.443 CD8_TEM L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 5.55e-01 -0.0499 0.0844 0.443 CD8_TEM L2
ENSG00000235162 C12orf75 534439 sc-eQTL 3.17e-02 0.147 0.0681 0.443 CD8_TEM L2
ENSG00000013503 POLR3B -588019 sc-eQTL 3.71e-01 -0.0742 0.0827 0.435 MAIT L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 4.92e-01 -0.0511 0.0743 0.435 MAIT L2
ENSG00000136044 APPL2 533526 sc-eQTL 4.89e-01 0.0549 0.0794 0.435 MAIT L2
ENSG00000136051 WASHC4 662405 sc-eQTL 2.70e-01 -0.103 0.0933 0.435 MAIT L2
ENSG00000151131 C12orf45 783413 sc-eQTL 6.47e-01 -0.0385 0.0839 0.435 MAIT L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 4.72e-01 -0.0545 0.0756 0.435 MAIT L2
ENSG00000235162 C12orf75 534439 sc-eQTL 3.16e-01 -0.0631 0.0628 0.435 MAIT L2
ENSG00000013503 POLR3B -588019 sc-eQTL 9.50e-02 -0.141 0.0839 0.444 NK_CD56bright L2
ENSG00000074590 NUAK1 -370304 sc-eQTL 7.76e-01 0.021 0.0738 0.444 NK_CD56bright L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 3.78e-01 0.061 0.069 0.444 NK_CD56bright L2
ENSG00000136044 APPL2 533526 sc-eQTL 6.48e-01 -0.0376 0.0824 0.444 NK_CD56bright L2
ENSG00000136051 WASHC4 662405 sc-eQTL 7.03e-01 0.0325 0.0851 0.444 NK_CD56bright L2
ENSG00000151131 C12orf45 783413 sc-eQTL 1.19e-01 -0.143 0.0916 0.444 NK_CD56bright L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 8.26e-01 0.0194 0.0882 0.444 NK_CD56bright L2
ENSG00000235162 C12orf75 534439 sc-eQTL 1.19e-02 0.199 0.0785 0.444 NK_CD56bright L2
ENSG00000013503 POLR3B -588019 sc-eQTL 4.61e-02 0.15 0.0749 0.433 NK_CD56dim L2
ENSG00000074590 NUAK1 -370304 sc-eQTL 6.16e-01 -0.037 0.0738 0.433 NK_CD56dim L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 5.14e-01 0.0496 0.0758 0.433 NK_CD56dim L2
ENSG00000136044 APPL2 533526 sc-eQTL 9.52e-01 0.00414 0.0681 0.433 NK_CD56dim L2
ENSG00000136051 WASHC4 662405 sc-eQTL 6.30e-01 -0.0359 0.0744 0.433 NK_CD56dim L2
ENSG00000151131 C12orf45 783413 sc-eQTL 7.14e-01 -0.0329 0.0895 0.433 NK_CD56dim L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 4.76e-01 -0.0475 0.0664 0.433 NK_CD56dim L2
ENSG00000235162 C12orf75 534439 sc-eQTL 1.73e-01 0.0734 0.0537 0.433 NK_CD56dim L2
ENSG00000013503 POLR3B -588019 sc-eQTL 1.88e-01 -0.113 0.0853 0.434 NK_HLA L2
ENSG00000074590 NUAK1 -370304 sc-eQTL 8.21e-02 -0.145 0.0829 0.434 NK_HLA L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 4.50e-01 0.0584 0.077 0.434 NK_HLA L2
ENSG00000136044 APPL2 533526 sc-eQTL 1.13e-01 0.135 0.0845 0.434 NK_HLA L2
ENSG00000136051 WASHC4 662405 sc-eQTL 8.42e-01 -0.0176 0.0879 0.434 NK_HLA L2
ENSG00000151131 C12orf45 783413 sc-eQTL 8.75e-02 -0.151 0.0879 0.434 NK_HLA L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 2.68e-01 -0.0961 0.0866 0.434 NK_HLA L2
ENSG00000235162 C12orf75 534439 sc-eQTL 9.69e-01 0.00248 0.0636 0.434 NK_HLA L2
ENSG00000013503 POLR3B -588019 sc-eQTL 5.31e-01 0.0534 0.085 0.433 NK_cytokine L2
ENSG00000074590 NUAK1 -370304 sc-eQTL 7.52e-02 -0.139 0.078 0.433 NK_cytokine L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 9.97e-01 0.000337 0.0778 0.433 NK_cytokine L2
ENSG00000136044 APPL2 533526 sc-eQTL 8.74e-01 -0.0131 0.0823 0.433 NK_cytokine L2
ENSG00000136051 WASHC4 662405 sc-eQTL 8.65e-01 -0.0135 0.0796 0.433 NK_cytokine L2
ENSG00000151131 C12orf45 783413 sc-eQTL 7.49e-01 -0.0282 0.088 0.433 NK_cytokine L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 6.60e-01 -0.0306 0.0695 0.433 NK_cytokine L2
ENSG00000235162 C12orf75 534439 sc-eQTL 8.58e-01 -0.0105 0.0584 0.433 NK_cytokine L2
ENSG00000013503 POLR3B -588019 sc-eQTL 1.45e-01 -0.152 0.104 0.433 PB L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 5.37e-01 -0.0364 0.0587 0.433 PB L2
ENSG00000136044 APPL2 533526 sc-eQTL 9.63e-01 -0.00494 0.106 0.433 PB L2
ENSG00000136051 WASHC4 662405 sc-eQTL 4.22e-01 -0.0727 0.0903 0.433 PB L2
ENSG00000136052 SLC41A2 810985 sc-eQTL 7.48e-01 0.031 0.0964 0.433 PB L2
ENSG00000151131 C12orf45 783413 sc-eQTL 8.54e-01 -0.0176 0.0952 0.433 PB L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 9.07e-01 -0.0115 0.0982 0.433 PB L2
ENSG00000235162 C12orf75 534439 sc-eQTL 2.18e-01 0.082 0.0662 0.433 PB L2
ENSG00000013503 POLR3B -588019 sc-eQTL 1.76e-01 0.117 0.0859 0.439 Pro_T L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 1.59e-01 -0.0634 0.0449 0.439 Pro_T L2
ENSG00000136044 APPL2 533526 sc-eQTL 7.23e-01 -0.0291 0.0818 0.439 Pro_T L2
ENSG00000136051 WASHC4 662405 sc-eQTL 6.10e-01 0.0464 0.091 0.439 Pro_T L2
ENSG00000151131 C12orf45 783413 sc-eQTL 4.87e-01 -0.0483 0.0695 0.439 Pro_T L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 8.69e-02 0.119 0.0691 0.439 Pro_T L2
ENSG00000235162 C12orf75 534439 sc-eQTL 8.85e-01 -0.00844 0.0581 0.439 Pro_T L2
ENSG00000013503 POLR3B -588019 sc-eQTL 5.57e-01 0.0506 0.086 0.434 Treg L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 7.36e-01 0.0215 0.0636 0.434 Treg L2
ENSG00000136044 APPL2 533526 sc-eQTL 3.84e-01 0.066 0.0757 0.434 Treg L2
ENSG00000136051 WASHC4 662405 sc-eQTL 5.40e-01 0.0517 0.0842 0.434 Treg L2
ENSG00000151131 C12orf45 783413 sc-eQTL 6.83e-01 0.0347 0.0848 0.434 Treg L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 9.93e-01 0.000594 0.0685 0.434 Treg L2
ENSG00000235162 C12orf75 534439 sc-eQTL 9.26e-01 0.00512 0.0548 0.434 Treg L2
ENSG00000013503 POLR3B -588019 sc-eQTL 4.04e-01 -0.0692 0.0826 0.439 cDC L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 1.08e-01 -0.0987 0.0611 0.439 cDC L2
ENSG00000136044 APPL2 533526 sc-eQTL 8.36e-01 0.0181 0.0874 0.439 cDC L2
ENSG00000136051 WASHC4 662405 sc-eQTL 4.27e-01 0.0619 0.0778 0.439 cDC L2
ENSG00000136052 SLC41A2 810985 sc-eQTL 4.48e-02 0.136 0.0672 0.439 cDC L2
ENSG00000151131 C12orf45 783413 sc-eQTL 3.71e-01 0.0541 0.0603 0.439 cDC L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 7.68e-01 -0.0271 0.0917 0.439 cDC L2
ENSG00000235162 C12orf75 534439 sc-eQTL 8.19e-01 0.015 0.0654 0.439 cDC L2
ENSG00000013503 POLR3B -588019 sc-eQTL 8.69e-01 0.0133 0.0804 0.434 cMono_IL1B L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 8.44e-02 -0.0948 0.0547 0.434 cMono_IL1B L2
ENSG00000136044 APPL2 533526 sc-eQTL 9.22e-01 0.00816 0.083 0.434 cMono_IL1B L2
ENSG00000136051 WASHC4 662405 sc-eQTL 8.83e-01 0.00631 0.0428 0.434 cMono_IL1B L2
ENSG00000151131 C12orf45 783413 sc-eQTL 7.46e-02 -0.124 0.0691 0.434 cMono_IL1B L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 7.65e-01 0.0197 0.0657 0.434 cMono_IL1B L2
ENSG00000235162 C12orf75 534439 sc-eQTL 3.14e-01 0.0777 0.077 0.434 cMono_IL1B L2
ENSG00000013503 POLR3B -588019 sc-eQTL 5.72e-01 -0.0466 0.0824 0.434 cMono_S100A L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 3.98e-01 -0.0509 0.0602 0.434 cMono_S100A L2
ENSG00000136044 APPL2 533526 sc-eQTL 5.00e-01 0.0603 0.0892 0.434 cMono_S100A L2
ENSG00000136051 WASHC4 662405 sc-eQTL 6.79e-01 0.0258 0.0622 0.434 cMono_S100A L2
ENSG00000151131 C12orf45 783413 sc-eQTL 5.67e-02 -0.141 0.0737 0.434 cMono_S100A L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 7.23e-01 -0.025 0.0706 0.434 cMono_S100A L2
ENSG00000235162 C12orf75 534439 sc-eQTL 1.96e-01 0.0986 0.076 0.434 cMono_S100A L2
ENSG00000013503 POLR3B -588019 sc-eQTL 5.59e-01 -0.0582 0.0994 0.43 gdT L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 8.37e-01 -0.0196 0.0948 0.43 gdT L2
ENSG00000136044 APPL2 533526 sc-eQTL 3.78e-01 0.0828 0.0937 0.43 gdT L2
ENSG00000136051 WASHC4 662405 sc-eQTL 1.36e-01 0.165 0.11 0.43 gdT L2
ENSG00000151131 C12orf45 783413 sc-eQTL 8.59e-01 -0.0196 0.11 0.43 gdT L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 5.53e-01 0.0612 0.103 0.43 gdT L2
ENSG00000235162 C12orf75 534439 sc-eQTL 9.55e-01 0.00491 0.0873 0.43 gdT L2
ENSG00000013503 POLR3B -588019 sc-eQTL 8.51e-01 -0.0153 0.0814 0.433 intMono L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 3.09e-01 -0.0844 0.0828 0.433 intMono L2
ENSG00000136044 APPL2 533526 sc-eQTL 5.90e-01 -0.0469 0.0869 0.433 intMono L2
ENSG00000136051 WASHC4 662405 sc-eQTL 8.26e-01 -0.0161 0.0735 0.433 intMono L2
ENSG00000151131 C12orf45 783413 sc-eQTL 2.38e-01 -0.105 0.0887 0.433 intMono L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 3.89e-01 -0.0803 0.0929 0.433 intMono L2
ENSG00000235162 C12orf75 534439 sc-eQTL 6.38e-01 -0.0363 0.0768 0.433 intMono L2
ENSG00000013503 POLR3B -588019 sc-eQTL 5.94e-01 -0.0406 0.076 0.43 ncMono L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 4.70e-01 -0.0569 0.0786 0.43 ncMono L2
ENSG00000136044 APPL2 533526 sc-eQTL 6.63e-01 -0.035 0.0803 0.43 ncMono L2
ENSG00000136051 WASHC4 662405 sc-eQTL 3.71e-01 -0.0485 0.0541 0.43 ncMono L2
ENSG00000151131 C12orf45 783413 sc-eQTL 9.28e-01 0.00784 0.0869 0.43 ncMono L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 2.14e-01 -0.096 0.077 0.43 ncMono L2
ENSG00000235162 C12orf75 534439 sc-eQTL 5.55e-01 0.0497 0.0841 0.43 ncMono L2
ENSG00000013503 POLR3B -588019 sc-eQTL 2.01e-01 0.121 0.0941 0.438 pDC L2
ENSG00000136026 CKAP4 -534550 sc-eQTL 6.46e-01 0.0279 0.0606 0.438 pDC L2
ENSG00000136044 APPL2 533526 sc-eQTL 9.93e-01 -0.000763 0.0932 0.438 pDC L2
ENSG00000136051 WASHC4 662405 sc-eQTL 9.42e-01 0.00645 0.0884 0.438 pDC L2
ENSG00000136052 SLC41A2 810985 sc-eQTL 9.88e-01 -0.00108 0.0689 0.438 pDC L2
ENSG00000151131 C12orf45 783413 sc-eQTL 5.34e-01 0.0374 0.06 0.438 pDC L2
ENSG00000166046 TCP11L2 -532200 sc-eQTL 7.27e-01 0.0318 0.0911 0.438 pDC L2
ENSG00000235162 C12orf75 534439 sc-eQTL 7.13e-01 -0.0213 0.0578 0.438 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -588019 sc-eQTL 9.46e-01 -0.00593 0.0879 0.434 B_Memory LOneK1K
ENSG00000136026 CKAP4 -534550 sc-eQTL 8.19e-01 -0.0136 0.0594 0.434 B_Memory LOneK1K
ENSG00000136044 APPL2 533526 sc-eQTL 5.64e-01 0.0433 0.0749 0.434 B_Memory LOneK1K
ENSG00000136051 WASHC4 662405 sc-eQTL 5.52e-02 -0.102 0.0531 0.434 B_Memory LOneK1K
ENSG00000136052 SLC41A2 810985 sc-eQTL 2.51e-01 -0.0892 0.0775 0.434 B_Memory LOneK1K
ENSG00000151131 C12orf45 783413 sc-eQTL 8.67e-01 0.0136 0.0813 0.434 B_Memory LOneK1K
ENSG00000166046 TCP11L2 -532200 sc-eQTL 9.89e-01 -0.000955 0.0719 0.434 B_Memory LOneK1K
ENSG00000235162 C12orf75 534439 sc-eQTL 3.92e-01 -0.0631 0.0735 0.434 B_Memory LOneK1K
ENSG00000013503 POLR3B -588019 sc-eQTL 3.88e-01 -0.0702 0.0813 0.434 B_Naive LOneK1K
ENSG00000136026 CKAP4 -534550 sc-eQTL 5.63e-01 0.0351 0.0606 0.434 B_Naive LOneK1K
ENSG00000136044 APPL2 533526 sc-eQTL 8.30e-01 -0.0134 0.0621 0.434 B_Naive LOneK1K
ENSG00000136051 WASHC4 662405 sc-eQTL 5.52e-01 -0.0316 0.0529 0.434 B_Naive LOneK1K
ENSG00000136052 SLC41A2 810985 sc-eQTL 6.46e-01 0.0298 0.0648 0.434 B_Naive LOneK1K
ENSG00000151131 C12orf45 783413 sc-eQTL 2.94e-01 0.0926 0.0881 0.434 B_Naive LOneK1K
ENSG00000166046 TCP11L2 -532200 sc-eQTL 7.63e-01 -0.016 0.0529 0.434 B_Naive LOneK1K
ENSG00000235162 C12orf75 534439 sc-eQTL 5.48e-01 -0.0448 0.0745 0.434 B_Naive LOneK1K
ENSG00000013503 POLR3B -588019 sc-eQTL 7.41e-01 -0.025 0.0756 0.434 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 -534550 sc-eQTL 2.12e-01 -0.0656 0.0524 0.434 CD14_Mono LOneK1K
ENSG00000136044 APPL2 533526 sc-eQTL 7.68e-01 0.0241 0.0814 0.434 CD14_Mono LOneK1K
ENSG00000136051 WASHC4 662405 sc-eQTL 6.43e-01 0.0185 0.0398 0.434 CD14_Mono LOneK1K
ENSG00000151131 C12orf45 783413 sc-eQTL 1.36e-02 -0.159 0.0641 0.434 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 -532200 sc-eQTL 8.87e-01 0.00794 0.0559 0.434 CD14_Mono LOneK1K
ENSG00000235162 C12orf75 534439 sc-eQTL 1.28e-01 0.112 0.0735 0.434 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -588019 sc-eQTL 7.71e-01 0.0215 0.0737 0.431 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 -534550 sc-eQTL 4.37e-01 -0.0566 0.0727 0.431 CD16_Mono LOneK1K
ENSG00000136044 APPL2 533526 sc-eQTL 2.50e-01 -0.0943 0.0817 0.431 CD16_Mono LOneK1K
ENSG00000136051 WASHC4 662405 sc-eQTL 6.75e-01 -0.0204 0.0485 0.431 CD16_Mono LOneK1K
ENSG00000151131 C12orf45 783413 sc-eQTL 5.51e-01 -0.0527 0.0881 0.431 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 -532200 sc-eQTL 2.04e-01 -0.0957 0.0751 0.431 CD16_Mono LOneK1K
ENSG00000235162 C12orf75 534439 sc-eQTL 8.39e-01 0.0175 0.0861 0.431 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -588019 sc-eQTL 3.47e-01 0.0721 0.0765 0.433 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 -370304 sc-eQTL 6.95e-02 -0.133 0.0731 0.433 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 -534550 sc-eQTL 6.36e-01 0.0332 0.0701 0.433 NK_CD56dim LOneK1K
ENSG00000136044 APPL2 533526 sc-eQTL 4.68e-01 0.0476 0.0654 0.433 NK_CD56dim LOneK1K
ENSG00000136051 WASHC4 662405 sc-eQTL 5.93e-01 -0.0383 0.0717 0.433 NK_CD56dim LOneK1K
ENSG00000151131 C12orf45 783413 sc-eQTL 5.29e-01 -0.0545 0.0863 0.433 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 -532200 sc-eQTL 3.63e-01 -0.0546 0.0598 0.433 NK_CD56dim LOneK1K
ENSG00000235162 C12orf75 534439 sc-eQTL 3.44e-01 0.0475 0.0501 0.433 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000074590 NUAK1 -370304 eQTL 0.00657 -0.0793 0.0291 0.0 0.0 0.484

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina