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Genes within 1Mb (chr12:105743299:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -614449 sc-eQTL 9.65e-01 -0.00381 0.0859 0.374 B L1
ENSG00000136026 CKAP4 -560980 sc-eQTL 1.17e-01 -0.0695 0.0442 0.374 B L1
ENSG00000136044 APPL2 507096 sc-eQTL 7.53e-01 -0.0205 0.0653 0.374 B L1
ENSG00000136051 WASHC4 635975 sc-eQTL 9.80e-01 0.00106 0.0416 0.374 B L1
ENSG00000136052 SLC41A2 784555 sc-eQTL 7.79e-01 0.0186 0.0663 0.374 B L1
ENSG00000151131 C12orf45 756983 sc-eQTL 8.61e-01 0.0141 0.0802 0.374 B L1
ENSG00000166046 TCP11L2 -558630 sc-eQTL 3.93e-01 -0.0455 0.0532 0.374 B L1
ENSG00000235162 C12orf75 508009 sc-eQTL 5.29e-01 0.036 0.0571 0.374 B L1
ENSG00000013503 POLR3B -614449 sc-eQTL 9.78e-01 0.00174 0.062 0.374 CD4T L1
ENSG00000136026 CKAP4 -560980 sc-eQTL 6.26e-01 0.0258 0.0529 0.374 CD4T L1
ENSG00000136044 APPL2 507096 sc-eQTL 1.92e-01 -0.0794 0.0608 0.374 CD4T L1
ENSG00000136051 WASHC4 635975 sc-eQTL 3.56e-01 0.0555 0.06 0.374 CD4T L1
ENSG00000151131 C12orf45 756983 sc-eQTL 4.50e-01 0.0628 0.0831 0.374 CD4T L1
ENSG00000166046 TCP11L2 -558630 sc-eQTL 7.61e-01 -0.0164 0.0539 0.374 CD4T L1
ENSG00000235162 C12orf75 508009 sc-eQTL 4.86e-01 0.0325 0.0465 0.374 CD4T L1
ENSG00000013503 POLR3B -614449 sc-eQTL 3.34e-01 0.0713 0.0735 0.374 CD8T L1
ENSG00000136026 CKAP4 -560980 sc-eQTL 6.23e-01 -0.0239 0.0487 0.374 CD8T L1
ENSG00000136044 APPL2 507096 sc-eQTL 2.46e-01 -0.0808 0.0695 0.374 CD8T L1
ENSG00000136051 WASHC4 635975 sc-eQTL 4.37e-01 0.0605 0.0777 0.374 CD8T L1
ENSG00000151131 C12orf45 756983 sc-eQTL 2.45e-01 0.0818 0.0702 0.374 CD8T L1
ENSG00000166046 TCP11L2 -558630 sc-eQTL 6.76e-02 -0.0787 0.0429 0.374 CD8T L1
ENSG00000235162 C12orf75 508009 sc-eQTL 2.31e-01 -0.037 0.0309 0.374 CD8T L1
ENSG00000013503 POLR3B -614449 sc-eQTL 5.99e-01 0.0451 0.0857 0.383 DC L1
ENSG00000136026 CKAP4 -560980 sc-eQTL 4.63e-01 -0.0433 0.0589 0.383 DC L1
ENSG00000136044 APPL2 507096 sc-eQTL 3.33e-01 -0.0854 0.0879 0.383 DC L1
ENSG00000136051 WASHC4 635975 sc-eQTL 9.82e-01 -0.00157 0.0711 0.383 DC L1
ENSG00000136052 SLC41A2 784555 sc-eQTL 6.10e-01 -0.0308 0.0602 0.383 DC L1
ENSG00000151131 C12orf45 756983 sc-eQTL 2.00e-01 0.0691 0.0537 0.383 DC L1
ENSG00000166046 TCP11L2 -558630 sc-eQTL 4.44e-01 -0.068 0.0885 0.383 DC L1
ENSG00000235162 C12orf75 508009 sc-eQTL 1.97e-01 -0.0466 0.036 0.383 DC L1
ENSG00000013503 POLR3B -614449 sc-eQTL 9.39e-01 0.00573 0.0744 0.374 Mono L1
ENSG00000136026 CKAP4 -560980 sc-eQTL 5.08e-02 -0.104 0.0529 0.374 Mono L1
ENSG00000136044 APPL2 507096 sc-eQTL 1.62e-01 -0.118 0.0839 0.374 Mono L1
ENSG00000136051 WASHC4 635975 sc-eQTL 1.01e-01 -0.068 0.0412 0.374 Mono L1
ENSG00000151131 C12orf45 756983 sc-eQTL 2.69e-01 -0.0805 0.0726 0.374 Mono L1
ENSG00000166046 TCP11L2 -558630 sc-eQTL 3.02e-02 0.134 0.0612 0.374 Mono L1
ENSG00000235162 C12orf75 508009 sc-eQTL 6.40e-01 0.0378 0.0808 0.374 Mono L1
ENSG00000013503 POLR3B -614449 sc-eQTL 5.10e-02 0.162 0.0823 0.376 NK L1
ENSG00000074590 NUAK1 -396734 sc-eQTL 3.24e-01 0.0808 0.0816 0.376 NK L1
ENSG00000136026 CKAP4 -560980 sc-eQTL 8.55e-01 -0.0136 0.0744 0.376 NK L1
ENSG00000136044 APPL2 507096 sc-eQTL 8.80e-02 -0.125 0.0728 0.376 NK L1
ENSG00000136051 WASHC4 635975 sc-eQTL 8.46e-01 0.0149 0.0765 0.376 NK L1
ENSG00000151131 C12orf45 756983 sc-eQTL 9.67e-01 0.00393 0.094 0.376 NK L1
ENSG00000166046 TCP11L2 -558630 sc-eQTL 3.60e-01 -0.062 0.0676 0.376 NK L1
ENSG00000235162 C12orf75 508009 sc-eQTL 7.94e-01 0.0145 0.0555 0.376 NK L1
ENSG00000013503 POLR3B -614449 sc-eQTL 5.52e-01 0.0543 0.0911 0.374 Other_T L1
ENSG00000136026 CKAP4 -560980 sc-eQTL 4.81e-01 -0.0403 0.0571 0.374 Other_T L1
ENSG00000136044 APPL2 507096 sc-eQTL 3.92e-01 0.0637 0.0744 0.374 Other_T L1
ENSG00000136051 WASHC4 635975 sc-eQTL 9.14e-01 0.0105 0.0978 0.374 Other_T L1
ENSG00000151131 C12orf45 756983 sc-eQTL 4.67e-01 0.0501 0.0687 0.374 Other_T L1
ENSG00000166046 TCP11L2 -558630 sc-eQTL 7.37e-02 0.125 0.0695 0.374 Other_T L1
ENSG00000235162 C12orf75 508009 sc-eQTL 5.75e-01 0.0321 0.0572 0.374 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -614449 sc-eQTL 9.21e-01 0.00918 0.0922 0.367 B_Activated L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 1.60e-01 -0.123 0.0871 0.367 B_Activated L2
ENSG00000136044 APPL2 507096 sc-eQTL 3.08e-02 -0.212 0.0975 0.367 B_Activated L2
ENSG00000136051 WASHC4 635975 sc-eQTL 1.83e-01 -0.125 0.0934 0.367 B_Activated L2
ENSG00000136052 SLC41A2 784555 sc-eQTL 1.55e-01 0.0997 0.0698 0.367 B_Activated L2
ENSG00000151131 C12orf45 756983 sc-eQTL 5.06e-01 0.0649 0.0973 0.367 B_Activated L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 5.21e-01 0.0627 0.0975 0.367 B_Activated L2
ENSG00000235162 C12orf75 508009 sc-eQTL 8.91e-01 0.013 0.0946 0.367 B_Activated L2
ENSG00000013503 POLR3B -614449 sc-eQTL 5.94e-01 -0.0515 0.0963 0.373 B_Intermediate L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 2.18e-02 -0.163 0.0705 0.373 B_Intermediate L2
ENSG00000136044 APPL2 507096 sc-eQTL 2.25e-01 0.103 0.0846 0.373 B_Intermediate L2
ENSG00000136051 WASHC4 635975 sc-eQTL 9.47e-01 0.00491 0.0734 0.373 B_Intermediate L2
ENSG00000136052 SLC41A2 784555 sc-eQTL 2.80e-01 0.087 0.0804 0.373 B_Intermediate L2
ENSG00000151131 C12orf45 756983 sc-eQTL 6.56e-01 0.0416 0.0932 0.373 B_Intermediate L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 2.93e-01 0.0871 0.0827 0.373 B_Intermediate L2
ENSG00000235162 C12orf75 508009 sc-eQTL 4.87e-01 0.0603 0.0866 0.373 B_Intermediate L2
ENSG00000013503 POLR3B -614449 sc-eQTL 6.14e-02 -0.178 0.0946 0.377 B_Memory L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 8.68e-01 0.0134 0.0806 0.377 B_Memory L2
ENSG00000136044 APPL2 507096 sc-eQTL 2.75e-01 -0.095 0.0868 0.377 B_Memory L2
ENSG00000136051 WASHC4 635975 sc-eQTL 6.60e-01 0.0317 0.0719 0.377 B_Memory L2
ENSG00000136052 SLC41A2 784555 sc-eQTL 3.92e-01 -0.0722 0.0842 0.377 B_Memory L2
ENSG00000151131 C12orf45 756983 sc-eQTL 2.35e-01 -0.116 0.0971 0.377 B_Memory L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 8.34e-01 0.0168 0.0803 0.377 B_Memory L2
ENSG00000235162 C12orf75 508009 sc-eQTL 7.39e-01 -0.0246 0.0738 0.377 B_Memory L2
ENSG00000013503 POLR3B -614449 sc-eQTL 3.92e-01 0.0771 0.0899 0.374 B_Naive1 L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 2.39e-01 0.08 0.0677 0.374 B_Naive1 L2
ENSG00000136044 APPL2 507096 sc-eQTL 5.84e-01 0.0416 0.0759 0.374 B_Naive1 L2
ENSG00000136051 WASHC4 635975 sc-eQTL 8.36e-01 -0.0142 0.0683 0.374 B_Naive1 L2
ENSG00000136052 SLC41A2 784555 sc-eQTL 7.34e-01 0.0268 0.079 0.374 B_Naive1 L2
ENSG00000151131 C12orf45 756983 sc-eQTL 6.01e-01 0.0514 0.0981 0.374 B_Naive1 L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 2.89e-01 -0.0706 0.0665 0.374 B_Naive1 L2
ENSG00000235162 C12orf75 508009 sc-eQTL 1.21e-01 0.136 0.087 0.374 B_Naive1 L2
ENSG00000013503 POLR3B -614449 sc-eQTL 5.57e-01 -0.0566 0.0961 0.376 B_Naive2 L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 4.56e-01 0.0623 0.0834 0.376 B_Naive2 L2
ENSG00000136044 APPL2 507096 sc-eQTL 3.87e-01 -0.0692 0.0797 0.376 B_Naive2 L2
ENSG00000136051 WASHC4 635975 sc-eQTL 5.56e-01 -0.0425 0.0721 0.376 B_Naive2 L2
ENSG00000136052 SLC41A2 784555 sc-eQTL 6.28e-01 -0.0368 0.0757 0.376 B_Naive2 L2
ENSG00000151131 C12orf45 756983 sc-eQTL 9.30e-01 0.00907 0.103 0.376 B_Naive2 L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 1.67e-01 -0.0982 0.0709 0.376 B_Naive2 L2
ENSG00000235162 C12orf75 508009 sc-eQTL 9.50e-01 0.00556 0.0885 0.376 B_Naive2 L2
ENSG00000013503 POLR3B -614449 sc-eQTL 9.51e-02 0.149 0.0888 0.375 CD4_CTL L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 7.18e-01 0.0267 0.0738 0.375 CD4_CTL L2
ENSG00000136044 APPL2 507096 sc-eQTL 9.96e-01 0.00045 0.0919 0.375 CD4_CTL L2
ENSG00000136051 WASHC4 635975 sc-eQTL 1.41e-01 0.13 0.0876 0.375 CD4_CTL L2
ENSG00000151131 C12orf45 756983 sc-eQTL 4.34e-01 0.0695 0.0886 0.375 CD4_CTL L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 5.17e-01 0.0605 0.0931 0.375 CD4_CTL L2
ENSG00000235162 C12orf75 508009 sc-eQTL 8.68e-01 0.00889 0.0535 0.375 CD4_CTL L2
ENSG00000013503 POLR3B -614449 sc-eQTL 7.69e-01 -0.0204 0.0694 0.374 CD4_Naive L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 8.02e-01 0.015 0.0596 0.374 CD4_Naive L2
ENSG00000136044 APPL2 507096 sc-eQTL 2.49e-01 -0.0732 0.0633 0.374 CD4_Naive L2
ENSG00000136051 WASHC4 635975 sc-eQTL 8.05e-01 -0.0155 0.0626 0.374 CD4_Naive L2
ENSG00000151131 C12orf45 756983 sc-eQTL 2.76e-01 0.0996 0.0911 0.374 CD4_Naive L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 3.35e-01 -0.0576 0.0595 0.374 CD4_Naive L2
ENSG00000235162 C12orf75 508009 sc-eQTL 5.61e-01 -0.0473 0.0814 0.374 CD4_Naive L2
ENSG00000013503 POLR3B -614449 sc-eQTL 6.52e-01 0.0358 0.0791 0.374 CD4_TCM L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 8.03e-01 -0.0146 0.0582 0.374 CD4_TCM L2
ENSG00000136044 APPL2 507096 sc-eQTL 1.48e-01 -0.109 0.0753 0.374 CD4_TCM L2
ENSG00000136051 WASHC4 635975 sc-eQTL 4.27e-01 0.062 0.0778 0.374 CD4_TCM L2
ENSG00000151131 C12orf45 756983 sc-eQTL 7.67e-01 0.0285 0.0963 0.374 CD4_TCM L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 7.78e-01 -0.0181 0.064 0.374 CD4_TCM L2
ENSG00000235162 C12orf75 508009 sc-eQTL 2.40e-02 0.142 0.0626 0.374 CD4_TCM L2
ENSG00000013503 POLR3B -614449 sc-eQTL 3.23e-01 -0.0988 0.0997 0.374 CD4_TEM L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 6.63e-02 0.144 0.0778 0.374 CD4_TEM L2
ENSG00000136044 APPL2 507096 sc-eQTL 9.12e-01 0.00955 0.0858 0.374 CD4_TEM L2
ENSG00000136051 WASHC4 635975 sc-eQTL 6.72e-01 -0.0412 0.097 0.374 CD4_TEM L2
ENSG00000151131 C12orf45 756983 sc-eQTL 5.13e-01 -0.0616 0.094 0.374 CD4_TEM L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 7.89e-01 -0.021 0.0784 0.374 CD4_TEM L2
ENSG00000235162 C12orf75 508009 sc-eQTL 2.09e-01 -0.0789 0.0627 0.374 CD4_TEM L2
ENSG00000013503 POLR3B -614449 sc-eQTL 4.65e-01 0.0658 0.0899 0.374 CD8_CTL L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 3.72e-01 -0.0716 0.08 0.374 CD8_CTL L2
ENSG00000136044 APPL2 507096 sc-eQTL 5.42e-01 -0.0462 0.0757 0.374 CD8_CTL L2
ENSG00000136051 WASHC4 635975 sc-eQTL 1.95e-01 -0.109 0.0836 0.374 CD8_CTL L2
ENSG00000151131 C12orf45 756983 sc-eQTL 1.86e-01 -0.131 0.0987 0.374 CD8_CTL L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 2.25e-01 -0.104 0.0857 0.374 CD8_CTL L2
ENSG00000235162 C12orf75 508009 sc-eQTL 2.84e-01 -0.0681 0.0634 0.374 CD8_CTL L2
ENSG00000013503 POLR3B -614449 sc-eQTL 9.50e-01 0.00513 0.0812 0.374 CD8_Naive L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 6.42e-01 -0.0337 0.0724 0.374 CD8_Naive L2
ENSG00000136044 APPL2 507096 sc-eQTL 4.66e-02 -0.148 0.0737 0.374 CD8_Naive L2
ENSG00000136051 WASHC4 635975 sc-eQTL 4.74e-01 0.0578 0.0806 0.374 CD8_Naive L2
ENSG00000151131 C12orf45 756983 sc-eQTL 2.28e-01 0.104 0.0864 0.374 CD8_Naive L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 1.42e-02 -0.158 0.0638 0.374 CD8_Naive L2
ENSG00000235162 C12orf75 508009 sc-eQTL 7.41e-01 0.0229 0.0692 0.374 CD8_Naive L2
ENSG00000013503 POLR3B -614449 sc-eQTL 5.29e-01 0.0598 0.0947 0.38 CD8_TCM L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 3.65e-01 0.075 0.0825 0.38 CD8_TCM L2
ENSG00000136044 APPL2 507096 sc-eQTL 9.46e-01 -0.0063 0.093 0.38 CD8_TCM L2
ENSG00000136051 WASHC4 635975 sc-eQTL 5.69e-01 0.0534 0.0935 0.38 CD8_TCM L2
ENSG00000151131 C12orf45 756983 sc-eQTL 7.16e-01 0.0363 0.0998 0.38 CD8_TCM L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 8.15e-01 -0.0186 0.0797 0.38 CD8_TCM L2
ENSG00000235162 C12orf75 508009 sc-eQTL 5.99e-01 -0.0464 0.0881 0.38 CD8_TCM L2
ENSG00000013503 POLR3B -614449 sc-eQTL 6.78e-01 0.0398 0.0957 0.372 CD8_TEM L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 2.41e-01 -0.103 0.0878 0.372 CD8_TEM L2
ENSG00000136044 APPL2 507096 sc-eQTL 3.50e-01 0.0907 0.0968 0.372 CD8_TEM L2
ENSG00000136051 WASHC4 635975 sc-eQTL 9.94e-01 0.000793 0.1 0.372 CD8_TEM L2
ENSG00000151131 C12orf45 756983 sc-eQTL 6.83e-01 -0.0401 0.0978 0.372 CD8_TEM L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 4.82e-01 0.0646 0.0916 0.372 CD8_TEM L2
ENSG00000235162 C12orf75 508009 sc-eQTL 9.62e-01 -0.00354 0.0748 0.372 CD8_TEM L2
ENSG00000013503 POLR3B -614449 sc-eQTL 3.86e-01 0.0807 0.0929 0.377 MAIT L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 3.81e-01 -0.0733 0.0834 0.377 MAIT L2
ENSG00000136044 APPL2 507096 sc-eQTL 5.66e-01 0.0512 0.0892 0.377 MAIT L2
ENSG00000136051 WASHC4 635975 sc-eQTL 4.96e-01 -0.0716 0.105 0.377 MAIT L2
ENSG00000151131 C12orf45 756983 sc-eQTL 1.31e-01 0.142 0.0938 0.377 MAIT L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 6.73e-01 -0.036 0.085 0.377 MAIT L2
ENSG00000235162 C12orf75 508009 sc-eQTL 1.78e-01 -0.0951 0.0705 0.377 MAIT L2
ENSG00000013503 POLR3B -614449 sc-eQTL 8.54e-01 0.0165 0.0893 0.38 NK_CD56bright L2
ENSG00000074590 NUAK1 -396734 sc-eQTL 4.10e-01 0.0643 0.0778 0.38 NK_CD56bright L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 3.93e-01 -0.0625 0.073 0.38 NK_CD56bright L2
ENSG00000136044 APPL2 507096 sc-eQTL 6.59e-01 0.0385 0.087 0.38 NK_CD56bright L2
ENSG00000136051 WASHC4 635975 sc-eQTL 2.55e-01 0.102 0.0896 0.38 NK_CD56bright L2
ENSG00000151131 C12orf45 756983 sc-eQTL 5.64e-01 -0.0562 0.0973 0.38 NK_CD56bright L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 8.78e-01 0.0144 0.0932 0.38 NK_CD56bright L2
ENSG00000235162 C12orf75 508009 sc-eQTL 8.54e-01 0.0156 0.0842 0.38 NK_CD56bright L2
ENSG00000013503 POLR3B -614449 sc-eQTL 1.46e-01 0.122 0.0836 0.375 NK_CD56dim L2
ENSG00000074590 NUAK1 -396734 sc-eQTL 4.77e-01 0.0584 0.082 0.375 NK_CD56dim L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 7.54e-01 0.0264 0.0843 0.375 NK_CD56dim L2
ENSG00000136044 APPL2 507096 sc-eQTL 3.82e-01 -0.0663 0.0756 0.375 NK_CD56dim L2
ENSG00000136051 WASHC4 635975 sc-eQTL 6.29e-01 0.04 0.0827 0.375 NK_CD56dim L2
ENSG00000151131 C12orf45 756983 sc-eQTL 9.30e-01 -0.00877 0.0995 0.375 NK_CD56dim L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 8.36e-01 -0.0154 0.0739 0.375 NK_CD56dim L2
ENSG00000235162 C12orf75 508009 sc-eQTL 2.32e-01 0.0716 0.0597 0.375 NK_CD56dim L2
ENSG00000013503 POLR3B -614449 sc-eQTL 7.69e-01 -0.0276 0.0935 0.384 NK_HLA L2
ENSG00000074590 NUAK1 -396734 sc-eQTL 7.10e-01 0.034 0.0912 0.384 NK_HLA L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 5.72e-01 -0.0476 0.0842 0.384 NK_HLA L2
ENSG00000136044 APPL2 507096 sc-eQTL 1.41e-01 -0.136 0.0923 0.384 NK_HLA L2
ENSG00000136051 WASHC4 635975 sc-eQTL 1.69e-01 -0.132 0.0956 0.384 NK_HLA L2
ENSG00000151131 C12orf45 756983 sc-eQTL 3.63e-01 0.088 0.0964 0.384 NK_HLA L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 7.79e-01 -0.0266 0.0948 0.384 NK_HLA L2
ENSG00000235162 C12orf75 508009 sc-eQTL 9.50e-01 -0.00441 0.0695 0.384 NK_HLA L2
ENSG00000013503 POLR3B -614449 sc-eQTL 4.03e-02 0.189 0.0917 0.375 NK_cytokine L2
ENSG00000074590 NUAK1 -396734 sc-eQTL 3.97e-01 0.0725 0.0855 0.375 NK_cytokine L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 7.66e-01 0.0253 0.0847 0.375 NK_cytokine L2
ENSG00000136044 APPL2 507096 sc-eQTL 1.89e-02 -0.209 0.0885 0.375 NK_cytokine L2
ENSG00000136051 WASHC4 635975 sc-eQTL 5.44e-01 -0.0527 0.0867 0.375 NK_cytokine L2
ENSG00000151131 C12orf45 756983 sc-eQTL 7.96e-01 -0.0248 0.0959 0.375 NK_cytokine L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 6.95e-01 -0.0298 0.0758 0.375 NK_cytokine L2
ENSG00000235162 C12orf75 508009 sc-eQTL 4.88e-01 -0.0442 0.0636 0.375 NK_cytokine L2
ENSG00000013503 POLR3B -614449 sc-eQTL 1.81e-01 -0.159 0.118 0.348 PB L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 2.75e-01 -0.0731 0.0666 0.348 PB L2
ENSG00000136044 APPL2 507096 sc-eQTL 5.48e-01 -0.0728 0.121 0.348 PB L2
ENSG00000136051 WASHC4 635975 sc-eQTL 8.51e-02 -0.177 0.102 0.348 PB L2
ENSG00000136052 SLC41A2 784555 sc-eQTL 6.89e-01 -0.0441 0.11 0.348 PB L2
ENSG00000151131 C12orf45 756983 sc-eQTL 1.39e-01 -0.16 0.107 0.348 PB L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 1.52e-01 -0.16 0.111 0.348 PB L2
ENSG00000235162 C12orf75 508009 sc-eQTL 1.50e-01 0.109 0.0751 0.348 PB L2
ENSG00000013503 POLR3B -614449 sc-eQTL 2.02e-01 -0.12 0.0936 0.374 Pro_T L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 3.43e-01 0.0466 0.049 0.374 Pro_T L2
ENSG00000136044 APPL2 507096 sc-eQTL 3.20e-01 0.0887 0.0889 0.374 Pro_T L2
ENSG00000136051 WASHC4 635975 sc-eQTL 6.67e-01 0.0427 0.0991 0.374 Pro_T L2
ENSG00000151131 C12orf45 756983 sc-eQTL 7.79e-02 -0.133 0.0752 0.374 Pro_T L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 2.66e-01 0.0842 0.0755 0.374 Pro_T L2
ENSG00000235162 C12orf75 508009 sc-eQTL 8.30e-01 0.0136 0.0633 0.374 Pro_T L2
ENSG00000013503 POLR3B -614449 sc-eQTL 4.25e-01 0.0752 0.0941 0.374 Treg L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 6.34e-02 0.129 0.069 0.374 Treg L2
ENSG00000136044 APPL2 507096 sc-eQTL 2.78e-01 -0.0899 0.0828 0.374 Treg L2
ENSG00000136051 WASHC4 635975 sc-eQTL 3.77e-02 0.191 0.0913 0.374 Treg L2
ENSG00000151131 C12orf45 756983 sc-eQTL 7.39e-01 0.031 0.0929 0.374 Treg L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 6.89e-01 -0.0301 0.075 0.374 Treg L2
ENSG00000235162 C12orf75 508009 sc-eQTL 9.46e-01 -0.0041 0.06 0.374 Treg L2
ENSG00000013503 POLR3B -614449 sc-eQTL 4.89e-01 0.0594 0.0858 0.385 cDC L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 5.44e-01 -0.0387 0.0638 0.385 cDC L2
ENSG00000136044 APPL2 507096 sc-eQTL 1.42e-01 -0.133 0.0901 0.385 cDC L2
ENSG00000136051 WASHC4 635975 sc-eQTL 8.99e-01 0.0103 0.0809 0.385 cDC L2
ENSG00000136052 SLC41A2 784555 sc-eQTL 9.86e-02 0.116 0.07 0.385 cDC L2
ENSG00000151131 C12orf45 756983 sc-eQTL 4.93e-01 -0.043 0.0626 0.385 cDC L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 6.14e-02 -0.177 0.0942 0.385 cDC L2
ENSG00000235162 C12orf75 508009 sc-eQTL 4.22e-01 -0.0545 0.0678 0.385 cDC L2
ENSG00000013503 POLR3B -614449 sc-eQTL 5.61e-01 0.0517 0.0887 0.374 cMono_IL1B L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 1.39e-01 -0.0899 0.0605 0.374 cMono_IL1B L2
ENSG00000136044 APPL2 507096 sc-eQTL 8.74e-01 -0.0146 0.0916 0.374 cMono_IL1B L2
ENSG00000136051 WASHC4 635975 sc-eQTL 8.07e-02 -0.0822 0.0468 0.374 cMono_IL1B L2
ENSG00000151131 C12orf45 756983 sc-eQTL 2.43e-01 -0.0896 0.0766 0.374 cMono_IL1B L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 4.38e-01 0.0563 0.0724 0.374 cMono_IL1B L2
ENSG00000235162 C12orf75 508009 sc-eQTL 8.62e-01 0.0148 0.0852 0.374 cMono_IL1B L2
ENSG00000013503 POLR3B -614449 sc-eQTL 6.93e-01 0.0363 0.0918 0.374 cMono_S100A L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 3.35e-01 -0.0647 0.067 0.374 cMono_S100A L2
ENSG00000136044 APPL2 507096 sc-eQTL 2.21e-01 -0.122 0.0991 0.374 cMono_S100A L2
ENSG00000136051 WASHC4 635975 sc-eQTL 8.64e-01 -0.0119 0.0693 0.374 cMono_S100A L2
ENSG00000151131 C12orf45 756983 sc-eQTL 3.67e-01 -0.0747 0.0827 0.374 cMono_S100A L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 1.19e-01 0.123 0.0783 0.374 cMono_S100A L2
ENSG00000235162 C12orf75 508009 sc-eQTL 1.57e-01 -0.12 0.0847 0.374 cMono_S100A L2
ENSG00000013503 POLR3B -614449 sc-eQTL 8.10e-01 -0.0254 0.105 0.4 gdT L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 6.57e-01 -0.0447 0.1 0.4 gdT L2
ENSG00000136044 APPL2 507096 sc-eQTL 3.96e-01 0.0844 0.0992 0.4 gdT L2
ENSG00000136051 WASHC4 635975 sc-eQTL 4.69e-01 0.0851 0.117 0.4 gdT L2
ENSG00000151131 C12orf45 756983 sc-eQTL 2.52e-01 0.134 0.116 0.4 gdT L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 2.32e-01 0.13 0.109 0.4 gdT L2
ENSG00000235162 C12orf75 508009 sc-eQTL 9.27e-01 0.00844 0.0925 0.4 gdT L2
ENSG00000013503 POLR3B -614449 sc-eQTL 5.70e-01 -0.0506 0.0889 0.38 intMono L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 5.50e-02 -0.174 0.0899 0.38 intMono L2
ENSG00000136044 APPL2 507096 sc-eQTL 3.30e-02 -0.202 0.094 0.38 intMono L2
ENSG00000136051 WASHC4 635975 sc-eQTL 3.64e-01 -0.0728 0.0801 0.38 intMono L2
ENSG00000151131 C12orf45 756983 sc-eQTL 6.07e-02 -0.182 0.0964 0.38 intMono L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 9.56e-01 -0.00567 0.102 0.38 intMono L2
ENSG00000235162 C12orf75 508009 sc-eQTL 9.79e-01 0.00224 0.084 0.38 intMono L2
ENSG00000013503 POLR3B -614449 sc-eQTL 6.49e-01 -0.0368 0.0808 0.38 ncMono L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 2.86e-01 -0.0891 0.0834 0.38 ncMono L2
ENSG00000136044 APPL2 507096 sc-eQTL 9.60e-01 -0.00433 0.0854 0.38 ncMono L2
ENSG00000136051 WASHC4 635975 sc-eQTL 8.46e-01 -0.0112 0.0576 0.38 ncMono L2
ENSG00000151131 C12orf45 756983 sc-eQTL 9.63e-02 0.153 0.0918 0.38 ncMono L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 8.27e-01 -0.018 0.0822 0.38 ncMono L2
ENSG00000235162 C12orf75 508009 sc-eQTL 4.19e-01 0.0723 0.0893 0.38 ncMono L2
ENSG00000013503 POLR3B -614449 sc-eQTL 1.58e-01 -0.141 0.0991 0.39 pDC L2
ENSG00000136026 CKAP4 -560980 sc-eQTL 3.66e-01 -0.0578 0.0638 0.39 pDC L2
ENSG00000136044 APPL2 507096 sc-eQTL 7.50e-01 0.0314 0.0983 0.39 pDC L2
ENSG00000136051 WASHC4 635975 sc-eQTL 1.18e-01 -0.146 0.0925 0.39 pDC L2
ENSG00000136052 SLC41A2 784555 sc-eQTL 3.12e-01 -0.0735 0.0724 0.39 pDC L2
ENSG00000151131 C12orf45 756983 sc-eQTL 1.82e-01 0.0843 0.0629 0.39 pDC L2
ENSG00000166046 TCP11L2 -558630 sc-eQTL 6.05e-01 -0.0497 0.096 0.39 pDC L2
ENSG00000235162 C12orf75 508009 sc-eQTL 1.03e-01 -0.099 0.0604 0.39 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -614449 sc-eQTL 5.88e-02 -0.181 0.0953 0.374 B_Memory LOneK1K
ENSG00000136026 CKAP4 -560980 sc-eQTL 1.38e-01 -0.096 0.0646 0.374 B_Memory LOneK1K
ENSG00000136044 APPL2 507096 sc-eQTL 6.70e-01 -0.035 0.0818 0.374 B_Memory LOneK1K
ENSG00000136051 WASHC4 635975 sc-eQTL 8.94e-01 -0.00777 0.0585 0.374 B_Memory LOneK1K
ENSG00000136052 SLC41A2 784555 sc-eQTL 1.87e-01 0.112 0.0846 0.374 B_Memory LOneK1K
ENSG00000151131 C12orf45 756983 sc-eQTL 2.47e-01 0.103 0.0885 0.374 B_Memory LOneK1K
ENSG00000166046 TCP11L2 -558630 sc-eQTL 3.54e-01 0.0728 0.0784 0.374 B_Memory LOneK1K
ENSG00000235162 C12orf75 508009 sc-eQTL 1.45e-01 0.117 0.08 0.374 B_Memory LOneK1K
ENSG00000013503 POLR3B -614449 sc-eQTL 4.48e-01 0.0693 0.0912 0.374 B_Naive LOneK1K
ENSG00000136026 CKAP4 -560980 sc-eQTL 1.79e-01 0.0914 0.0677 0.374 B_Naive LOneK1K
ENSG00000136044 APPL2 507096 sc-eQTL 7.71e-01 -0.0203 0.0697 0.374 B_Naive LOneK1K
ENSG00000136051 WASHC4 635975 sc-eQTL 6.30e-01 -0.0287 0.0594 0.374 B_Naive LOneK1K
ENSG00000136052 SLC41A2 784555 sc-eQTL 6.10e-01 0.0371 0.0727 0.374 B_Naive LOneK1K
ENSG00000151131 C12orf45 756983 sc-eQTL 6.64e-01 0.043 0.099 0.374 B_Naive LOneK1K
ENSG00000166046 TCP11L2 -558630 sc-eQTL 1.92e-01 -0.0774 0.0591 0.374 B_Naive LOneK1K
ENSG00000235162 C12orf75 508009 sc-eQTL 2.52e-01 0.0958 0.0834 0.374 B_Naive LOneK1K
ENSG00000013503 POLR3B -614449 sc-eQTL 7.27e-01 0.0294 0.084 0.374 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 -560980 sc-eQTL 1.62e-01 -0.0817 0.0582 0.374 CD14_Mono LOneK1K
ENSG00000136044 APPL2 507096 sc-eQTL 3.83e-01 -0.079 0.0904 0.374 CD14_Mono LOneK1K
ENSG00000136051 WASHC4 635975 sc-eQTL 2.69e-01 -0.0488 0.0441 0.374 CD14_Mono LOneK1K
ENSG00000151131 C12orf45 756983 sc-eQTL 1.23e-01 -0.111 0.0719 0.374 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 -558630 sc-eQTL 4.67e-02 0.123 0.0616 0.374 CD14_Mono LOneK1K
ENSG00000235162 C12orf75 508009 sc-eQTL 7.09e-01 -0.0307 0.0821 0.374 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -614449 sc-eQTL 5.55e-01 -0.0464 0.0784 0.375 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 -560980 sc-eQTL 4.49e-02 -0.155 0.0767 0.375 CD16_Mono LOneK1K
ENSG00000136044 APPL2 507096 sc-eQTL 2.94e-01 -0.0916 0.087 0.375 CD16_Mono LOneK1K
ENSG00000136051 WASHC4 635975 sc-eQTL 6.58e-01 -0.0228 0.0516 0.375 CD16_Mono LOneK1K
ENSG00000151131 C12orf45 756983 sc-eQTL 6.39e-01 -0.0441 0.0938 0.375 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 -558630 sc-eQTL 5.02e-01 0.054 0.0802 0.375 CD16_Mono LOneK1K
ENSG00000235162 C12orf75 508009 sc-eQTL 6.76e-01 0.0384 0.0916 0.375 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -614449 sc-eQTL 9.01e-02 0.145 0.0849 0.375 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 -396734 sc-eQTL 3.04e-01 0.0845 0.082 0.375 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 -560980 sc-eQTL 7.86e-01 -0.0212 0.0782 0.375 NK_CD56dim LOneK1K
ENSG00000136044 APPL2 507096 sc-eQTL 9.09e-02 -0.123 0.0726 0.375 NK_CD56dim LOneK1K
ENSG00000136051 WASHC4 635975 sc-eQTL 8.65e-01 0.0137 0.08 0.375 NK_CD56dim LOneK1K
ENSG00000151131 C12orf45 756983 sc-eQTL 8.85e-01 -0.0139 0.0964 0.375 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 -558630 sc-eQTL 5.05e-01 -0.0446 0.0668 0.375 NK_CD56dim LOneK1K
ENSG00000235162 C12orf75 508009 sc-eQTL 7.83e-01 0.0155 0.0559 0.375 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000074590 \N -396734 8.48e-07 7.56e-07 2.01e-07 7e-07 1.05e-07 2.95e-07 8.7e-07 1.54e-07 8.36e-07 3.76e-07 1.09e-06 5.95e-07 1.63e-06 1.72e-07 3.12e-07 3.36e-07 6.07e-07 4.39e-07 3.74e-07 2.15e-07 2.38e-07 5.36e-07 4.96e-07 1.76e-07 1.36e-06 2.44e-07 3.93e-07 3.24e-07 6.85e-07 9.49e-07 4.26e-07 7.71e-08 1.94e-07 5.67e-07 3.42e-07 3.38e-07 4.73e-07 1.47e-07 4.57e-07 2.42e-07 3.03e-07 1.02e-06 5.53e-08 1.99e-07 1.61e-07 8.76e-08 1.58e-07 5.35e-08 5.86e-08
ENSG00000277715 \N -507460 3.92e-07 2.88e-07 8.99e-08 4.27e-07 1.03e-07 1.26e-07 5.13e-07 6.57e-08 2.75e-07 2.43e-07 3.66e-07 3.3e-07 8.37e-07 9.18e-08 9.33e-08 1.14e-07 1.35e-07 2.83e-07 1.51e-07 7.26e-08 1.57e-07 2.45e-07 2.67e-07 4.15e-08 4.54e-07 2.01e-07 1.57e-07 1.61e-07 2.78e-07 4.61e-07 1.93e-07 3.78e-08 4.49e-08 1.75e-07 2.82e-07 8.17e-08 1.1e-07 9.33e-08 1.48e-07 3.03e-08 1.22e-07 3.66e-07 4.18e-08 5.7e-08 4.99e-08 1.31e-08 9.68e-08 2.48e-08 4.61e-08