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Genes within 1Mb (chr12:105641009:G:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -716739 sc-eQTL 5.09e-01 0.0547 0.0827 0.65 B L1
ENSG00000136026 CKAP4 -663270 sc-eQTL 6.57e-01 0.019 0.0428 0.65 B L1
ENSG00000136044 APPL2 404806 sc-eQTL 7.70e-01 -0.0184 0.0629 0.65 B L1
ENSG00000136051 WASHC4 533685 sc-eQTL 3.26e-01 -0.0394 0.04 0.65 B L1
ENSG00000136052 SLC41A2 682265 sc-eQTL 7.73e-01 -0.0184 0.0639 0.65 B L1
ENSG00000151131 C12orf45 654693 sc-eQTL 7.59e-01 0.0238 0.0773 0.65 B L1
ENSG00000166046 TCP11L2 -660920 sc-eQTL 9.46e-01 0.00347 0.0514 0.65 B L1
ENSG00000235162 C12orf75 405719 sc-eQTL 2.86e-01 0.0588 0.0549 0.65 B L1
ENSG00000013503 POLR3B -716739 sc-eQTL 4.99e-01 -0.0401 0.0592 0.65 CD4T L1
ENSG00000136026 CKAP4 -663270 sc-eQTL 5.48e-01 0.0305 0.0506 0.65 CD4T L1
ENSG00000136044 APPL2 404806 sc-eQTL 6.47e-01 -0.0267 0.0583 0.65 CD4T L1
ENSG00000136051 WASHC4 533685 sc-eQTL 2.79e-01 0.0622 0.0573 0.65 CD4T L1
ENSG00000151131 C12orf45 654693 sc-eQTL 2.67e-01 -0.0882 0.0793 0.65 CD4T L1
ENSG00000166046 TCP11L2 -660920 sc-eQTL 8.88e-01 0.00724 0.0515 0.65 CD4T L1
ENSG00000235162 C12orf75 405719 sc-eQTL 4.56e-01 0.0332 0.0444 0.65 CD4T L1
ENSG00000013503 POLR3B -716739 sc-eQTL 7.79e-01 -0.0197 0.0703 0.65 CD8T L1
ENSG00000136026 CKAP4 -663270 sc-eQTL 3.10e-01 -0.0472 0.0463 0.65 CD8T L1
ENSG00000136044 APPL2 404806 sc-eQTL 3.93e-01 -0.0568 0.0664 0.65 CD8T L1
ENSG00000136051 WASHC4 533685 sc-eQTL 8.74e-01 0.0118 0.0742 0.65 CD8T L1
ENSG00000151131 C12orf45 654693 sc-eQTL 2.26e-01 -0.0813 0.067 0.65 CD8T L1
ENSG00000166046 TCP11L2 -660920 sc-eQTL 5.58e-01 0.0242 0.0412 0.65 CD8T L1
ENSG00000235162 C12orf75 405719 sc-eQTL 8.67e-01 -0.00497 0.0295 0.65 CD8T L1
ENSG00000013503 POLR3B -716739 sc-eQTL 6.77e-03 0.231 0.0844 0.646 DC L1
ENSG00000136026 CKAP4 -663270 sc-eQTL 2.52e-01 0.0677 0.0589 0.646 DC L1
ENSG00000136044 APPL2 404806 sc-eQTL 3.67e-01 -0.0797 0.0881 0.646 DC L1
ENSG00000136051 WASHC4 533685 sc-eQTL 5.72e-01 -0.0403 0.0711 0.646 DC L1
ENSG00000136052 SLC41A2 682265 sc-eQTL 4.83e-01 0.0424 0.0603 0.646 DC L1
ENSG00000151131 C12orf45 654693 sc-eQTL 4.78e-01 -0.0383 0.0539 0.646 DC L1
ENSG00000166046 TCP11L2 -660920 sc-eQTL 6.62e-01 0.0389 0.0888 0.646 DC L1
ENSG00000235162 C12orf75 405719 sc-eQTL 7.00e-02 -0.0654 0.0359 0.646 DC L1
ENSG00000013503 POLR3B -716739 sc-eQTL 2.46e-01 -0.082 0.0704 0.65 Mono L1
ENSG00000136026 CKAP4 -663270 sc-eQTL 8.52e-01 -0.00944 0.0507 0.65 Mono L1
ENSG00000136044 APPL2 404806 sc-eQTL 4.06e-01 -0.0666 0.08 0.65 Mono L1
ENSG00000136051 WASHC4 533685 sc-eQTL 8.89e-02 -0.0669 0.0391 0.65 Mono L1
ENSG00000151131 C12orf45 654693 sc-eQTL 5.75e-01 0.0388 0.0691 0.65 Mono L1
ENSG00000166046 TCP11L2 -660920 sc-eQTL 6.52e-01 -0.0265 0.0588 0.65 Mono L1
ENSG00000235162 C12orf75 405719 sc-eQTL 1.94e-01 -0.0996 0.0765 0.65 Mono L1
ENSG00000013503 POLR3B -716739 sc-eQTL 3.26e-01 0.0764 0.0775 0.648 NK L1
ENSG00000074590 NUAK1 -499024 sc-eQTL 9.45e-01 0.00532 0.0765 0.648 NK L1
ENSG00000136026 CKAP4 -663270 sc-eQTL 1.61e-01 0.0975 0.0692 0.648 NK L1
ENSG00000136044 APPL2 404806 sc-eQTL 1.67e-01 -0.0948 0.0683 0.648 NK L1
ENSG00000136051 WASHC4 533685 sc-eQTL 5.01e-01 0.0482 0.0715 0.648 NK L1
ENSG00000151131 C12orf45 654693 sc-eQTL 6.08e-01 0.0451 0.0879 0.648 NK L1
ENSG00000166046 TCP11L2 -660920 sc-eQTL 2.16e-01 0.0783 0.0631 0.648 NK L1
ENSG00000235162 C12orf75 405719 sc-eQTL 8.21e-01 -0.0118 0.0519 0.648 NK L1
ENSG00000013503 POLR3B -716739 sc-eQTL 7.71e-01 0.0255 0.0876 0.65 Other_T L1
ENSG00000136026 CKAP4 -663270 sc-eQTL 8.12e-01 0.0131 0.0549 0.65 Other_T L1
ENSG00000136044 APPL2 404806 sc-eQTL 1.69e-01 -0.0983 0.0712 0.65 Other_T L1
ENSG00000136051 WASHC4 533685 sc-eQTL 3.44e-01 -0.0889 0.0937 0.65 Other_T L1
ENSG00000151131 C12orf45 654693 sc-eQTL 5.28e-01 -0.0418 0.0661 0.65 Other_T L1
ENSG00000166046 TCP11L2 -660920 sc-eQTL 6.14e-01 0.034 0.0673 0.65 Other_T L1
ENSG00000235162 C12orf75 405719 sc-eQTL 4.67e-01 0.04 0.0549 0.65 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -716739 sc-eQTL 2.47e-01 -0.101 0.0867 0.643 B_Activated L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 4.76e-01 0.059 0.0826 0.643 B_Activated L2
ENSG00000136044 APPL2 404806 sc-eQTL 4.03e-01 0.078 0.0931 0.643 B_Activated L2
ENSG00000136051 WASHC4 533685 sc-eQTL 1.46e-01 -0.129 0.0881 0.643 B_Activated L2
ENSG00000136052 SLC41A2 682265 sc-eQTL 9.20e-01 0.00663 0.0663 0.643 B_Activated L2
ENSG00000151131 C12orf45 654693 sc-eQTL 8.73e-01 0.0147 0.092 0.643 B_Activated L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 7.72e-01 -0.0267 0.0921 0.643 B_Activated L2
ENSG00000235162 C12orf75 405719 sc-eQTL 2.70e-01 0.0986 0.089 0.643 B_Activated L2
ENSG00000013503 POLR3B -716739 sc-eQTL 1.06e-01 0.149 0.0914 0.65 B_Intermediate L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 8.38e-01 0.0139 0.0681 0.65 B_Intermediate L2
ENSG00000136044 APPL2 404806 sc-eQTL 8.64e-02 -0.139 0.0805 0.65 B_Intermediate L2
ENSG00000136051 WASHC4 533685 sc-eQTL 6.35e-01 -0.0333 0.07 0.65 B_Intermediate L2
ENSG00000136052 SLC41A2 682265 sc-eQTL 5.52e-02 0.147 0.0763 0.65 B_Intermediate L2
ENSG00000151131 C12orf45 654693 sc-eQTL 3.92e-01 0.0763 0.0888 0.65 B_Intermediate L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 6.48e-01 0.0362 0.0791 0.65 B_Intermediate L2
ENSG00000235162 C12orf75 405719 sc-eQTL 1.51e-01 0.119 0.0824 0.65 B_Intermediate L2
ENSG00000013503 POLR3B -716739 sc-eQTL 9.50e-01 0.00579 0.0926 0.649 B_Memory L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 5.85e-01 0.0427 0.0782 0.649 B_Memory L2
ENSG00000136044 APPL2 404806 sc-eQTL 8.49e-01 0.0161 0.0845 0.649 B_Memory L2
ENSG00000136051 WASHC4 533685 sc-eQTL 4.32e-01 -0.0548 0.0697 0.649 B_Memory L2
ENSG00000136052 SLC41A2 682265 sc-eQTL 8.63e-01 0.0141 0.0819 0.649 B_Memory L2
ENSG00000151131 C12orf45 654693 sc-eQTL 8.19e-02 0.164 0.0939 0.649 B_Memory L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 3.13e-01 0.0786 0.0777 0.649 B_Memory L2
ENSG00000235162 C12orf75 405719 sc-eQTL 2.88e-01 -0.0762 0.0715 0.649 B_Memory L2
ENSG00000013503 POLR3B -716739 sc-eQTL 5.81e-01 0.0468 0.0846 0.65 B_Naive1 L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 7.27e-01 0.0223 0.0638 0.65 B_Naive1 L2
ENSG00000136044 APPL2 404806 sc-eQTL 9.01e-01 -0.00887 0.0714 0.65 B_Naive1 L2
ENSG00000136051 WASHC4 533685 sc-eQTL 3.51e-01 0.06 0.0641 0.65 B_Naive1 L2
ENSG00000136052 SLC41A2 682265 sc-eQTL 6.00e-01 -0.039 0.0743 0.65 B_Naive1 L2
ENSG00000151131 C12orf45 654693 sc-eQTL 1.65e-01 -0.128 0.0919 0.65 B_Naive1 L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 5.37e-01 -0.0387 0.0626 0.65 B_Naive1 L2
ENSG00000235162 C12orf75 405719 sc-eQTL 1.60e-01 0.115 0.0818 0.65 B_Naive1 L2
ENSG00000013503 POLR3B -716739 sc-eQTL 5.20e-01 0.0582 0.0903 0.65 B_Naive2 L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 2.97e-01 0.0819 0.0782 0.65 B_Naive2 L2
ENSG00000136044 APPL2 404806 sc-eQTL 4.95e-01 0.0513 0.075 0.65 B_Naive2 L2
ENSG00000136051 WASHC4 533685 sc-eQTL 6.18e-01 -0.0338 0.0678 0.65 B_Naive2 L2
ENSG00000136052 SLC41A2 682265 sc-eQTL 2.15e-01 -0.0882 0.0709 0.65 B_Naive2 L2
ENSG00000151131 C12orf45 654693 sc-eQTL 4.47e-01 -0.0734 0.0963 0.65 B_Naive2 L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 9.26e-02 0.112 0.0664 0.65 B_Naive2 L2
ENSG00000235162 C12orf75 405719 sc-eQTL 1.89e-01 0.109 0.0828 0.65 B_Naive2 L2
ENSG00000013503 POLR3B -716739 sc-eQTL 4.87e-01 0.0602 0.0865 0.652 CD4_CTL L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 4.86e-01 0.0499 0.0714 0.652 CD4_CTL L2
ENSG00000136044 APPL2 404806 sc-eQTL 9.90e-02 -0.146 0.0883 0.652 CD4_CTL L2
ENSG00000136051 WASHC4 533685 sc-eQTL 4.33e-01 -0.0669 0.0852 0.652 CD4_CTL L2
ENSG00000151131 C12orf45 654693 sc-eQTL 7.53e-01 -0.027 0.0858 0.652 CD4_CTL L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 8.23e-01 0.0202 0.0902 0.652 CD4_CTL L2
ENSG00000235162 C12orf75 405719 sc-eQTL 6.53e-01 0.0233 0.0517 0.652 CD4_CTL L2
ENSG00000013503 POLR3B -716739 sc-eQTL 1.62e-01 -0.0935 0.0666 0.65 CD4_Naive L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 9.25e-01 0.00544 0.0574 0.65 CD4_Naive L2
ENSG00000136044 APPL2 404806 sc-eQTL 8.06e-01 0.0151 0.0612 0.65 CD4_Naive L2
ENSG00000136051 WASHC4 533685 sc-eQTL 6.06e-01 0.0312 0.0603 0.65 CD4_Naive L2
ENSG00000151131 C12orf45 654693 sc-eQTL 4.48e-01 -0.0668 0.088 0.65 CD4_Naive L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 9.77e-01 -0.00164 0.0575 0.65 CD4_Naive L2
ENSG00000235162 C12orf75 405719 sc-eQTL 7.03e-01 0.03 0.0785 0.65 CD4_Naive L2
ENSG00000013503 POLR3B -716739 sc-eQTL 3.82e-01 0.0659 0.0753 0.65 CD4_TCM L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 9.72e-01 0.00197 0.0554 0.65 CD4_TCM L2
ENSG00000136044 APPL2 404806 sc-eQTL 3.26e-01 -0.0709 0.0719 0.65 CD4_TCM L2
ENSG00000136051 WASHC4 533685 sc-eQTL 5.08e-01 0.0492 0.0742 0.65 CD4_TCM L2
ENSG00000151131 C12orf45 654693 sc-eQTL 3.32e-01 -0.0889 0.0915 0.65 CD4_TCM L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 1.60e-01 0.0856 0.0607 0.65 CD4_TCM L2
ENSG00000235162 C12orf75 405719 sc-eQTL 2.98e-01 0.0628 0.0602 0.65 CD4_TCM L2
ENSG00000013503 POLR3B -716739 sc-eQTL 3.24e-01 0.0916 0.0926 0.65 CD4_TEM L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 2.19e-01 -0.0894 0.0726 0.65 CD4_TEM L2
ENSG00000136044 APPL2 404806 sc-eQTL 1.35e-01 -0.119 0.0793 0.65 CD4_TEM L2
ENSG00000136051 WASHC4 533685 sc-eQTL 5.91e-01 0.0484 0.0901 0.65 CD4_TEM L2
ENSG00000151131 C12orf45 654693 sc-eQTL 7.64e-01 0.0263 0.0874 0.65 CD4_TEM L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 3.17e-01 -0.073 0.0727 0.65 CD4_TEM L2
ENSG00000235162 C12orf75 405719 sc-eQTL 5.04e-02 0.114 0.058 0.65 CD4_TEM L2
ENSG00000013503 POLR3B -716739 sc-eQTL 7.79e-01 0.0239 0.0849 0.65 CD8_CTL L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 8.02e-01 -0.019 0.0756 0.65 CD8_CTL L2
ENSG00000136044 APPL2 404806 sc-eQTL 5.32e-02 -0.138 0.0709 0.65 CD8_CTL L2
ENSG00000136051 WASHC4 533685 sc-eQTL 2.43e-01 0.0925 0.079 0.65 CD8_CTL L2
ENSG00000151131 C12orf45 654693 sc-eQTL 7.66e-01 0.0278 0.0935 0.65 CD8_CTL L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 1.08e-01 0.13 0.0807 0.65 CD8_CTL L2
ENSG00000235162 C12orf75 405719 sc-eQTL 8.38e-01 -0.0123 0.0599 0.65 CD8_CTL L2
ENSG00000013503 POLR3B -716739 sc-eQTL 6.44e-01 -0.0362 0.0783 0.65 CD8_Naive L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 6.02e-01 -0.0364 0.0698 0.65 CD8_Naive L2
ENSG00000136044 APPL2 404806 sc-eQTL 6.07e-01 0.037 0.0718 0.65 CD8_Naive L2
ENSG00000136051 WASHC4 533685 sc-eQTL 9.98e-01 -0.000173 0.0778 0.65 CD8_Naive L2
ENSG00000151131 C12orf45 654693 sc-eQTL 5.12e-01 -0.0549 0.0836 0.65 CD8_Naive L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 6.99e-01 0.0242 0.0624 0.65 CD8_Naive L2
ENSG00000235162 C12orf75 405719 sc-eQTL 2.41e-01 0.0782 0.0665 0.65 CD8_Naive L2
ENSG00000013503 POLR3B -716739 sc-eQTL 3.27e-01 -0.0911 0.0927 0.65 CD8_TCM L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 3.33e-01 0.0785 0.0809 0.65 CD8_TCM L2
ENSG00000136044 APPL2 404806 sc-eQTL 5.92e-01 0.0489 0.0911 0.65 CD8_TCM L2
ENSG00000136051 WASHC4 533685 sc-eQTL 9.53e-02 -0.153 0.0911 0.65 CD8_TCM L2
ENSG00000151131 C12orf45 654693 sc-eQTL 8.76e-02 -0.167 0.0971 0.65 CD8_TCM L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 2.52e-01 0.0894 0.0779 0.65 CD8_TCM L2
ENSG00000235162 C12orf75 405719 sc-eQTL 5.59e-01 -0.0506 0.0864 0.65 CD8_TCM L2
ENSG00000013503 POLR3B -716739 sc-eQTL 3.07e-01 0.0943 0.0921 0.653 CD8_TEM L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 2.19e-01 -0.104 0.0847 0.653 CD8_TEM L2
ENSG00000136044 APPL2 404806 sc-eQTL 3.03e-01 0.0965 0.0933 0.653 CD8_TEM L2
ENSG00000136051 WASHC4 533685 sc-eQTL 6.81e-01 -0.0398 0.0968 0.653 CD8_TEM L2
ENSG00000151131 C12orf45 654693 sc-eQTL 7.40e-02 -0.168 0.0936 0.653 CD8_TEM L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 6.79e-01 -0.0367 0.0885 0.653 CD8_TEM L2
ENSG00000235162 C12orf75 405719 sc-eQTL 8.86e-01 -0.0104 0.0721 0.653 CD8_TEM L2
ENSG00000013503 POLR3B -716739 sc-eQTL 6.64e-01 0.0378 0.0871 0.649 MAIT L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 5.80e-01 -0.0433 0.0781 0.649 MAIT L2
ENSG00000136044 APPL2 404806 sc-eQTL 1.66e-03 -0.26 0.0816 0.649 MAIT L2
ENSG00000136051 WASHC4 533685 sc-eQTL 1.81e-01 -0.132 0.0979 0.649 MAIT L2
ENSG00000151131 C12orf45 654693 sc-eQTL 4.31e-01 -0.0695 0.0882 0.649 MAIT L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 5.86e-01 -0.0434 0.0796 0.649 MAIT L2
ENSG00000235162 C12orf75 405719 sc-eQTL 8.86e-01 -0.00948 0.0662 0.649 MAIT L2
ENSG00000013503 POLR3B -716739 sc-eQTL 9.56e-01 -0.0048 0.0867 0.656 NK_CD56bright L2
ENSG00000074590 NUAK1 -499024 sc-eQTL 1.80e-01 0.101 0.0754 0.656 NK_CD56bright L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 5.10e-02 0.138 0.0703 0.656 NK_CD56bright L2
ENSG00000136044 APPL2 404806 sc-eQTL 7.57e-02 -0.15 0.0839 0.656 NK_CD56bright L2
ENSG00000136051 WASHC4 533685 sc-eQTL 8.53e-01 -0.0162 0.0873 0.656 NK_CD56bright L2
ENSG00000151131 C12orf45 654693 sc-eQTL 8.97e-01 0.0123 0.0945 0.656 NK_CD56bright L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 2.93e-01 0.0952 0.0903 0.656 NK_CD56bright L2
ENSG00000235162 C12orf75 405719 sc-eQTL 3.87e-01 -0.0708 0.0816 0.656 NK_CD56bright L2
ENSG00000013503 POLR3B -716739 sc-eQTL 9.79e-01 -0.00213 0.0796 0.649 NK_CD56dim L2
ENSG00000074590 NUAK1 -499024 sc-eQTL 6.32e-01 -0.0373 0.0778 0.649 NK_CD56dim L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 1.76e-01 0.108 0.0795 0.649 NK_CD56dim L2
ENSG00000136044 APPL2 404806 sc-eQTL 4.68e-01 -0.0521 0.0717 0.649 NK_CD56dim L2
ENSG00000136051 WASHC4 533685 sc-eQTL 6.08e-01 0.0403 0.0784 0.649 NK_CD56dim L2
ENSG00000151131 C12orf45 654693 sc-eQTL 2.59e-01 0.106 0.094 0.649 NK_CD56dim L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 2.07e-01 0.0883 0.0698 0.649 NK_CD56dim L2
ENSG00000235162 C12orf75 405719 sc-eQTL 5.32e-01 0.0355 0.0567 0.649 NK_CD56dim L2
ENSG00000013503 POLR3B -716739 sc-eQTL 8.81e-01 -0.0136 0.0906 0.651 NK_HLA L2
ENSG00000074590 NUAK1 -499024 sc-eQTL 1.64e-01 -0.123 0.0879 0.651 NK_HLA L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 9.32e-02 0.137 0.081 0.651 NK_HLA L2
ENSG00000136044 APPL2 404806 sc-eQTL 7.72e-01 -0.0261 0.0898 0.651 NK_HLA L2
ENSG00000136051 WASHC4 533685 sc-eQTL 1.30e-01 0.141 0.0924 0.651 NK_HLA L2
ENSG00000151131 C12orf45 654693 sc-eQTL 4.55e-01 -0.0699 0.0934 0.651 NK_HLA L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 4.23e-01 0.0736 0.0917 0.651 NK_HLA L2
ENSG00000235162 C12orf75 405719 sc-eQTL 9.45e-01 -0.00465 0.0673 0.651 NK_HLA L2
ENSG00000013503 POLR3B -716739 sc-eQTL 4.10e-01 0.0738 0.0894 0.649 NK_cytokine L2
ENSG00000074590 NUAK1 -499024 sc-eQTL 3.55e-01 0.0765 0.0825 0.649 NK_cytokine L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 6.09e-01 0.0419 0.0818 0.649 NK_cytokine L2
ENSG00000136044 APPL2 404806 sc-eQTL 2.41e-01 -0.101 0.0863 0.649 NK_cytokine L2
ENSG00000136051 WASHC4 533685 sc-eQTL 7.78e-01 -0.0237 0.0838 0.649 NK_cytokine L2
ENSG00000151131 C12orf45 654693 sc-eQTL 7.98e-01 0.0238 0.0926 0.649 NK_cytokine L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 2.16e-01 0.0906 0.073 0.649 NK_cytokine L2
ENSG00000235162 C12orf75 405719 sc-eQTL 4.26e-01 -0.049 0.0614 0.649 NK_cytokine L2
ENSG00000013503 POLR3B -716739 sc-eQTL 6.03e-01 0.0561 0.107 0.622 PB L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 9.34e-01 0.00501 0.0604 0.622 PB L2
ENSG00000136044 APPL2 404806 sc-eQTL 3.64e-01 0.0992 0.109 0.622 PB L2
ENSG00000136051 WASHC4 533685 sc-eQTL 1.54e-01 -0.132 0.0921 0.622 PB L2
ENSG00000136052 SLC41A2 682265 sc-eQTL 9.32e-01 0.00841 0.099 0.622 PB L2
ENSG00000151131 C12orf45 654693 sc-eQTL 1.09e-01 -0.156 0.0966 0.622 PB L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 2.88e-01 0.107 0.1 0.622 PB L2
ENSG00000235162 C12orf75 405719 sc-eQTL 3.87e-01 0.0592 0.0682 0.622 PB L2
ENSG00000013503 POLR3B -716739 sc-eQTL 3.54e-01 0.0828 0.0891 0.646 Pro_T L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 3.20e-01 -0.0464 0.0465 0.646 Pro_T L2
ENSG00000136044 APPL2 404806 sc-eQTL 1.76e-01 0.114 0.0843 0.646 Pro_T L2
ENSG00000136051 WASHC4 533685 sc-eQTL 2.37e-01 -0.111 0.0938 0.646 Pro_T L2
ENSG00000151131 C12orf45 654693 sc-eQTL 3.75e-01 -0.0638 0.0718 0.646 Pro_T L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 9.99e-01 -7.59e-05 0.0719 0.646 Pro_T L2
ENSG00000235162 C12orf75 405719 sc-eQTL 5.58e-01 0.0352 0.0601 0.646 Pro_T L2
ENSG00000013503 POLR3B -716739 sc-eQTL 3.37e-01 -0.0851 0.0885 0.65 Treg L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 5.83e-01 -0.036 0.0654 0.65 Treg L2
ENSG00000136044 APPL2 404806 sc-eQTL 1.75e-01 -0.106 0.0778 0.65 Treg L2
ENSG00000136051 WASHC4 533685 sc-eQTL 1.73e-01 0.118 0.0865 0.65 Treg L2
ENSG00000151131 C12orf45 654693 sc-eQTL 1.36e-01 -0.13 0.0869 0.65 Treg L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 8.04e-01 0.0175 0.0706 0.65 Treg L2
ENSG00000235162 C12orf75 405719 sc-eQTL 1.38e-01 0.0836 0.0562 0.65 Treg L2
ENSG00000013503 POLR3B -716739 sc-eQTL 2.47e-02 0.194 0.0857 0.661 cDC L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 4.53e-03 0.182 0.0632 0.661 cDC L2
ENSG00000136044 APPL2 404806 sc-eQTL 4.18e-02 -0.186 0.0907 0.661 cDC L2
ENSG00000136051 WASHC4 533685 sc-eQTL 5.96e-01 -0.0434 0.0818 0.661 cDC L2
ENSG00000136052 SLC41A2 682265 sc-eQTL 2.39e-01 0.084 0.0711 0.661 cDC L2
ENSG00000151131 C12orf45 654693 sc-eQTL 5.01e-01 0.0427 0.0634 0.661 cDC L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 6.98e-01 0.0374 0.0962 0.661 cDC L2
ENSG00000235162 C12orf75 405719 sc-eQTL 6.07e-01 0.0354 0.0687 0.661 cDC L2
ENSG00000013503 POLR3B -716739 sc-eQTL 4.68e-01 -0.0625 0.0858 0.65 cMono_IL1B L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 7.78e-01 0.0166 0.0589 0.65 cMono_IL1B L2
ENSG00000136044 APPL2 404806 sc-eQTL 2.78e-01 -0.0963 0.0885 0.65 cMono_IL1B L2
ENSG00000136051 WASHC4 533685 sc-eQTL 1.42e-01 -0.0669 0.0455 0.65 cMono_IL1B L2
ENSG00000151131 C12orf45 654693 sc-eQTL 9.19e-01 -0.00754 0.0744 0.65 cMono_IL1B L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 4.04e-01 -0.0586 0.0702 0.65 cMono_IL1B L2
ENSG00000235162 C12orf75 405719 sc-eQTL 4.10e-01 -0.068 0.0824 0.65 cMono_IL1B L2
ENSG00000013503 POLR3B -716739 sc-eQTL 8.11e-01 -0.021 0.0878 0.65 cMono_S100A L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 4.11e-01 -0.0528 0.0641 0.65 cMono_S100A L2
ENSG00000136044 APPL2 404806 sc-eQTL 9.07e-01 -0.0112 0.0951 0.65 cMono_S100A L2
ENSG00000136051 WASHC4 533685 sc-eQTL 6.03e-01 -0.0345 0.0662 0.65 cMono_S100A L2
ENSG00000151131 C12orf45 654693 sc-eQTL 2.08e-01 0.0995 0.0789 0.65 cMono_S100A L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 4.03e-01 -0.0629 0.0751 0.65 cMono_S100A L2
ENSG00000235162 C12orf75 405719 sc-eQTL 9.76e-01 -0.00248 0.0813 0.65 cMono_S100A L2
ENSG00000013503 POLR3B -716739 sc-eQTL 3.20e-01 0.108 0.108 0.679 gdT L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 1.44e-01 -0.15 0.102 0.679 gdT L2
ENSG00000136044 APPL2 404806 sc-eQTL 7.42e-01 0.0336 0.102 0.679 gdT L2
ENSG00000136051 WASHC4 533685 sc-eQTL 2.97e-02 0.26 0.118 0.679 gdT L2
ENSG00000151131 C12orf45 654693 sc-eQTL 4.97e-01 -0.0813 0.12 0.679 gdT L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 5.48e-01 -0.0672 0.112 0.679 gdT L2
ENSG00000235162 C12orf75 405719 sc-eQTL 6.35e-01 0.045 0.0947 0.679 gdT L2
ENSG00000013503 POLR3B -716739 sc-eQTL 2.52e-01 -0.098 0.0854 0.649 intMono L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 6.58e-01 0.0386 0.0873 0.649 intMono L2
ENSG00000136044 APPL2 404806 sc-eQTL 9.86e-01 0.00159 0.0914 0.649 intMono L2
ENSG00000136051 WASHC4 533685 sc-eQTL 6.91e-01 0.0308 0.0772 0.649 intMono L2
ENSG00000151131 C12orf45 654693 sc-eQTL 2.15e-01 0.116 0.0932 0.649 intMono L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 8.12e-01 -0.0233 0.0979 0.649 intMono L2
ENSG00000235162 C12orf75 405719 sc-eQTL 4.81e-01 0.057 0.0807 0.649 intMono L2
ENSG00000013503 POLR3B -716739 sc-eQTL 7.56e-01 0.0255 0.0817 0.647 ncMono L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 4.33e-01 0.0664 0.0844 0.647 ncMono L2
ENSG00000136044 APPL2 404806 sc-eQTL 9.23e-01 -0.00833 0.0864 0.647 ncMono L2
ENSG00000136051 WASHC4 533685 sc-eQTL 7.22e-01 -0.0207 0.0582 0.647 ncMono L2
ENSG00000151131 C12orf45 654693 sc-eQTL 2.96e-01 0.0976 0.0932 0.647 ncMono L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 3.10e-01 0.0844 0.0829 0.647 ncMono L2
ENSG00000235162 C12orf75 405719 sc-eQTL 9.29e-02 -0.152 0.0898 0.647 ncMono L2
ENSG00000013503 POLR3B -716739 sc-eQTL 9.72e-01 0.00359 0.102 0.667 pDC L2
ENSG00000136026 CKAP4 -663270 sc-eQTL 4.14e-02 -0.133 0.0647 0.667 pDC L2
ENSG00000136044 APPL2 404806 sc-eQTL 9.78e-01 0.00277 0.101 0.667 pDC L2
ENSG00000136051 WASHC4 533685 sc-eQTL 7.80e-01 0.0267 0.0956 0.667 pDC L2
ENSG00000136052 SLC41A2 682265 sc-eQTL 7.67e-01 -0.0221 0.0745 0.667 pDC L2
ENSG00000151131 C12orf45 654693 sc-eQTL 7.94e-01 0.017 0.0649 0.667 pDC L2
ENSG00000166046 TCP11L2 -660920 sc-eQTL 7.06e-02 -0.177 0.0975 0.667 pDC L2
ENSG00000235162 C12orf75 405719 sc-eQTL 1.88e-01 0.0823 0.0622 0.667 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -716739 sc-eQTL 9.18e-01 -0.00939 0.0911 0.65 B_Memory LOneK1K
ENSG00000136026 CKAP4 -663270 sc-eQTL 2.64e-01 0.0687 0.0614 0.65 B_Memory LOneK1K
ENSG00000136044 APPL2 404806 sc-eQTL 2.23e-01 -0.0946 0.0774 0.65 B_Memory LOneK1K
ENSG00000136051 WASHC4 533685 sc-eQTL 1.77e-01 -0.0749 0.0552 0.65 B_Memory LOneK1K
ENSG00000136052 SLC41A2 682265 sc-eQTL 7.33e-02 0.144 0.0799 0.65 B_Memory LOneK1K
ENSG00000151131 C12orf45 654693 sc-eQTL 6.12e-02 0.157 0.0835 0.65 B_Memory LOneK1K
ENSG00000166046 TCP11L2 -660920 sc-eQTL 8.17e-01 0.0173 0.0745 0.65 B_Memory LOneK1K
ENSG00000235162 C12orf75 405719 sc-eQTL 7.04e-01 0.029 0.0762 0.65 B_Memory LOneK1K
ENSG00000013503 POLR3B -716739 sc-eQTL 3.99e-01 0.0725 0.0858 0.65 B_Naive LOneK1K
ENSG00000136026 CKAP4 -663270 sc-eQTL 6.76e-01 0.0268 0.0639 0.65 B_Naive LOneK1K
ENSG00000136044 APPL2 404806 sc-eQTL 7.85e-01 0.0179 0.0655 0.65 B_Naive LOneK1K
ENSG00000136051 WASHC4 533685 sc-eQTL 8.29e-01 0.0121 0.0559 0.65 B_Naive LOneK1K
ENSG00000136052 SLC41A2 682265 sc-eQTL 4.67e-01 -0.0498 0.0683 0.65 B_Naive LOneK1K
ENSG00000151131 C12orf45 654693 sc-eQTL 2.99e-01 -0.0967 0.0929 0.65 B_Naive LOneK1K
ENSG00000166046 TCP11L2 -660920 sc-eQTL 5.83e-01 0.0307 0.0558 0.65 B_Naive LOneK1K
ENSG00000235162 C12orf75 405719 sc-eQTL 8.34e-02 0.136 0.0781 0.65 B_Naive LOneK1K
ENSG00000013503 POLR3B -716739 sc-eQTL 6.36e-01 -0.038 0.0803 0.65 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 -663270 sc-eQTL 8.49e-01 -0.0107 0.0559 0.65 CD14_Mono LOneK1K
ENSG00000136044 APPL2 404806 sc-eQTL 3.15e-01 -0.0869 0.0863 0.65 CD14_Mono LOneK1K
ENSG00000136051 WASHC4 533685 sc-eQTL 6.56e-02 -0.0776 0.0419 0.65 CD14_Mono LOneK1K
ENSG00000151131 C12orf45 654693 sc-eQTL 7.68e-01 0.0204 0.069 0.65 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 -660920 sc-eQTL 3.69e-01 -0.0533 0.0593 0.65 CD14_Mono LOneK1K
ENSG00000235162 C12orf75 405719 sc-eQTL 2.42e-01 -0.0917 0.0782 0.65 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -716739 sc-eQTL 4.49e-01 -0.0584 0.0769 0.647 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 -663270 sc-eQTL 9.09e-01 0.00868 0.076 0.647 CD16_Mono LOneK1K
ENSG00000136044 APPL2 404806 sc-eQTL 7.15e-01 -0.0313 0.0856 0.647 CD16_Mono LOneK1K
ENSG00000136051 WASHC4 533685 sc-eQTL 6.81e-01 -0.0208 0.0506 0.647 CD16_Mono LOneK1K
ENSG00000151131 C12orf45 654693 sc-eQTL 3.71e-01 0.0824 0.0919 0.647 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 -660920 sc-eQTL 9.93e-01 0.000707 0.0787 0.647 CD16_Mono LOneK1K
ENSG00000235162 C12orf75 405719 sc-eQTL 4.08e-01 -0.0744 0.0898 0.647 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -716739 sc-eQTL 4.83e-01 0.057 0.081 0.649 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 -499024 sc-eQTL 8.29e-01 0.0169 0.078 0.649 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 -663270 sc-eQTL 4.16e-01 0.0603 0.0741 0.649 NK_CD56dim LOneK1K
ENSG00000136044 APPL2 404806 sc-eQTL 2.88e-01 -0.0737 0.0692 0.649 NK_CD56dim LOneK1K
ENSG00000136051 WASHC4 533685 sc-eQTL 6.17e-01 0.038 0.0759 0.649 NK_CD56dim LOneK1K
ENSG00000151131 C12orf45 654693 sc-eQTL 5.78e-01 0.0509 0.0914 0.649 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 -660920 sc-eQTL 6.64e-02 0.116 0.0629 0.649 NK_CD56dim LOneK1K
ENSG00000235162 C12orf75 405719 sc-eQTL 9.65e-01 0.0023 0.0531 0.649 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136044 APPL2 404806 eQTL 0.89 -0.00276 0.0199 0.00213 0.0 0.352

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000258355 \N -605947 3.27e-07 2.3e-07 6.55e-08 2.54e-07 1.07e-07 1.13e-07 2.86e-07 5.84e-08 1.96e-07 1.11e-07 2.07e-07 1.57e-07 3.18e-07 8.54e-08 6.6e-08 9.35e-08 6.63e-08 2.04e-07 7.42e-08 7.05e-08 1.33e-07 2.06e-07 1.81e-07 3.41e-08 2.74e-07 1.65e-07 1.25e-07 1.46e-07 1.36e-07 1.58e-07 1.27e-07 5.38e-08 4.86e-08 1.03e-07 7.55e-08 3.57e-08 6.48e-08 5.53e-08 4.78e-08 7.78e-08 4.27e-08 2.15e-07 3.59e-08 1.53e-08 4.06e-08 1.03e-08 8.93e-08 2.71e-09 4.83e-08