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Genes within 1Mb (chr12:105597630:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -760118 sc-eQTL 4.50e-01 -0.087 0.115 0.844 B L1
ENSG00000136026 CKAP4 -706649 sc-eQTL 3.54e-01 -0.0551 0.0594 0.844 B L1
ENSG00000136044 APPL2 361427 sc-eQTL 1.26e-01 -0.134 0.087 0.844 B L1
ENSG00000136051 WASHC4 490306 sc-eQTL 4.26e-01 -0.0444 0.0557 0.844 B L1
ENSG00000136052 SLC41A2 638886 sc-eQTL 7.62e-01 -0.027 0.0888 0.844 B L1
ENSG00000151131 C12orf45 611314 sc-eQTL 3.27e-01 -0.105 0.107 0.844 B L1
ENSG00000166046 TCP11L2 -704299 sc-eQTL 9.78e-01 0.00195 0.0714 0.844 B L1
ENSG00000235162 C12orf75 362340 sc-eQTL 5.76e-01 -0.0428 0.0764 0.844 B L1
ENSG00000013503 POLR3B -760118 sc-eQTL 3.35e-01 -0.0814 0.0841 0.844 CD4T L1
ENSG00000136026 CKAP4 -706649 sc-eQTL 4.06e-01 -0.0599 0.0719 0.844 CD4T L1
ENSG00000136044 APPL2 361427 sc-eQTL 9.50e-01 -0.00516 0.083 0.844 CD4T L1
ENSG00000136051 WASHC4 490306 sc-eQTL 9.61e-01 -0.004 0.0818 0.844 CD4T L1
ENSG00000151131 C12orf45 611314 sc-eQTL 5.10e-01 -0.0746 0.113 0.844 CD4T L1
ENSG00000166046 TCP11L2 -704299 sc-eQTL 9.73e-01 0.00246 0.0733 0.844 CD4T L1
ENSG00000235162 C12orf75 362340 sc-eQTL 9.83e-01 -0.00133 0.0633 0.844 CD4T L1
ENSG00000013503 POLR3B -760118 sc-eQTL 6.68e-01 -0.0441 0.103 0.844 CD8T L1
ENSG00000136026 CKAP4 -706649 sc-eQTL 8.90e-01 -0.00942 0.0678 0.844 CD8T L1
ENSG00000136044 APPL2 361427 sc-eQTL 5.59e-01 -0.0567 0.097 0.844 CD8T L1
ENSG00000136051 WASHC4 490306 sc-eQTL 2.46e-01 0.126 0.108 0.844 CD8T L1
ENSG00000151131 C12orf45 611314 sc-eQTL 6.44e-01 0.0453 0.098 0.844 CD8T L1
ENSG00000166046 TCP11L2 -704299 sc-eQTL 1.82e-01 -0.0801 0.0599 0.844 CD8T L1
ENSG00000235162 C12orf75 362340 sc-eQTL 9.89e-01 -0.000583 0.0431 0.844 CD8T L1
ENSG00000013503 POLR3B -760118 sc-eQTL 5.18e-01 0.0742 0.115 0.838 DC L1
ENSG00000136026 CKAP4 -706649 sc-eQTL 4.33e-01 0.0619 0.0788 0.838 DC L1
ENSG00000136044 APPL2 361427 sc-eQTL 3.46e-01 0.111 0.118 0.838 DC L1
ENSG00000136051 WASHC4 490306 sc-eQTL 7.27e-01 -0.0332 0.095 0.838 DC L1
ENSG00000136052 SLC41A2 638886 sc-eQTL 2.96e-01 0.0842 0.0804 0.838 DC L1
ENSG00000151131 C12orf45 611314 sc-eQTL 1.20e-01 -0.112 0.0717 0.838 DC L1
ENSG00000166046 TCP11L2 -704299 sc-eQTL 4.86e-01 -0.0826 0.118 0.838 DC L1
ENSG00000235162 C12orf75 362340 sc-eQTL 1.58e-01 0.0682 0.0481 0.838 DC L1
ENSG00000013503 POLR3B -760118 sc-eQTL 5.13e-01 -0.0648 0.099 0.844 Mono L1
ENSG00000136026 CKAP4 -706649 sc-eQTL 3.69e-01 0.0638 0.0709 0.844 Mono L1
ENSG00000136044 APPL2 361427 sc-eQTL 5.74e-01 0.0632 0.112 0.844 Mono L1
ENSG00000136051 WASHC4 490306 sc-eQTL 4.76e-01 0.0393 0.0552 0.844 Mono L1
ENSG00000151131 C12orf45 611314 sc-eQTL 6.20e-01 -0.0481 0.0969 0.844 Mono L1
ENSG00000166046 TCP11L2 -704299 sc-eQTL 9.67e-01 0.00345 0.0824 0.844 Mono L1
ENSG00000235162 C12orf75 362340 sc-eQTL 6.29e-01 0.052 0.108 0.844 Mono L1
ENSG00000013503 POLR3B -760118 sc-eQTL 6.80e-01 0.0452 0.109 0.843 NK L1
ENSG00000074590 NUAK1 -542403 sc-eQTL 6.62e-01 -0.0471 0.108 0.843 NK L1
ENSG00000136026 CKAP4 -706649 sc-eQTL 8.83e-01 -0.0144 0.0979 0.843 NK L1
ENSG00000136044 APPL2 361427 sc-eQTL 8.33e-01 -0.0204 0.0965 0.843 NK L1
ENSG00000136051 WASHC4 490306 sc-eQTL 3.93e-01 0.086 0.101 0.843 NK L1
ENSG00000151131 C12orf45 611314 sc-eQTL 1.96e-01 -0.16 0.123 0.843 NK L1
ENSG00000166046 TCP11L2 -704299 sc-eQTL 9.37e-01 0.00704 0.0892 0.843 NK L1
ENSG00000235162 C12orf75 362340 sc-eQTL 5.15e-01 -0.0476 0.073 0.843 NK L1
ENSG00000013503 POLR3B -760118 sc-eQTL 1.65e-01 0.173 0.124 0.844 Other_T L1
ENSG00000136026 CKAP4 -706649 sc-eQTL 2.08e-01 0.0985 0.078 0.844 Other_T L1
ENSG00000136044 APPL2 361427 sc-eQTL 2.08e-01 0.129 0.102 0.844 Other_T L1
ENSG00000136051 WASHC4 490306 sc-eQTL 6.50e-01 -0.0608 0.134 0.844 Other_T L1
ENSG00000151131 C12orf45 611314 sc-eQTL 5.91e-01 -0.0508 0.0943 0.844 Other_T L1
ENSG00000166046 TCP11L2 -704299 sc-eQTL 3.88e-01 -0.083 0.0959 0.844 Other_T L1
ENSG00000235162 C12orf75 362340 sc-eQTL 2.86e-01 -0.0836 0.0782 0.844 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -760118 sc-eQTL 8.94e-01 0.017 0.127 0.847 B_Activated L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 5.50e-01 0.0721 0.12 0.847 B_Activated L2
ENSG00000136044 APPL2 361427 sc-eQTL 3.89e-01 -0.117 0.136 0.847 B_Activated L2
ENSG00000136051 WASHC4 490306 sc-eQTL 9.96e-02 0.212 0.128 0.847 B_Activated L2
ENSG00000136052 SLC41A2 638886 sc-eQTL 8.31e-01 -0.0207 0.0965 0.847 B_Activated L2
ENSG00000151131 C12orf45 611314 sc-eQTL 8.13e-01 0.0317 0.134 0.847 B_Activated L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 3.57e-01 -0.124 0.134 0.847 B_Activated L2
ENSG00000235162 C12orf75 362340 sc-eQTL 7.17e-01 0.0472 0.13 0.847 B_Activated L2
ENSG00000013503 POLR3B -760118 sc-eQTL 6.64e-01 -0.0561 0.129 0.843 B_Intermediate L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 6.15e-01 -0.0481 0.0955 0.843 B_Intermediate L2
ENSG00000136044 APPL2 361427 sc-eQTL 5.64e-01 -0.0656 0.114 0.843 B_Intermediate L2
ENSG00000136051 WASHC4 490306 sc-eQTL 8.92e-01 0.0133 0.0983 0.843 B_Intermediate L2
ENSG00000136052 SLC41A2 638886 sc-eQTL 4.79e-01 0.0764 0.108 0.843 B_Intermediate L2
ENSG00000151131 C12orf45 611314 sc-eQTL 3.81e-01 -0.109 0.125 0.843 B_Intermediate L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 5.83e-01 -0.061 0.111 0.843 B_Intermediate L2
ENSG00000235162 C12orf75 362340 sc-eQTL 6.22e-02 -0.216 0.115 0.843 B_Intermediate L2
ENSG00000013503 POLR3B -760118 sc-eQTL 9.20e-01 0.0128 0.128 0.843 B_Memory L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 7.48e-01 -0.0347 0.108 0.843 B_Memory L2
ENSG00000136044 APPL2 361427 sc-eQTL 7.35e-01 0.0396 0.117 0.843 B_Memory L2
ENSG00000136051 WASHC4 490306 sc-eQTL 8.30e-01 -0.0207 0.0963 0.843 B_Memory L2
ENSG00000136052 SLC41A2 638886 sc-eQTL 3.97e-01 -0.0958 0.113 0.843 B_Memory L2
ENSG00000151131 C12orf45 611314 sc-eQTL 1.44e-01 0.19 0.13 0.843 B_Memory L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 4.01e-01 0.0903 0.107 0.843 B_Memory L2
ENSG00000235162 C12orf75 362340 sc-eQTL 6.89e-01 0.0396 0.0989 0.843 B_Memory L2
ENSG00000013503 POLR3B -760118 sc-eQTL 9.71e-01 -0.00433 0.119 0.844 B_Naive1 L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 1.37e-02 -0.219 0.088 0.844 B_Naive1 L2
ENSG00000136044 APPL2 361427 sc-eQTL 1.39e-01 -0.148 0.0994 0.844 B_Naive1 L2
ENSG00000136051 WASHC4 490306 sc-eQTL 4.99e-01 0.0608 0.0898 0.844 B_Naive1 L2
ENSG00000136052 SLC41A2 638886 sc-eQTL 9.62e-01 -0.00493 0.104 0.844 B_Naive1 L2
ENSG00000151131 C12orf45 611314 sc-eQTL 9.95e-01 0.00073 0.129 0.844 B_Naive1 L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 3.62e-01 0.0799 0.0875 0.844 B_Naive1 L2
ENSG00000235162 C12orf75 362340 sc-eQTL 7.86e-01 -0.0313 0.115 0.844 B_Naive1 L2
ENSG00000013503 POLR3B -760118 sc-eQTL 9.36e-02 -0.213 0.127 0.843 B_Naive2 L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 8.83e-01 -0.0163 0.111 0.843 B_Naive2 L2
ENSG00000136044 APPL2 361427 sc-eQTL 9.16e-01 -0.0112 0.106 0.843 B_Naive2 L2
ENSG00000136051 WASHC4 490306 sc-eQTL 1.22e-02 -0.238 0.0943 0.843 B_Naive2 L2
ENSG00000136052 SLC41A2 638886 sc-eQTL 4.07e-01 0.0833 0.1 0.843 B_Naive2 L2
ENSG00000151131 C12orf45 611314 sc-eQTL 7.37e-01 -0.0457 0.136 0.843 B_Naive2 L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 3.89e-01 -0.0814 0.0942 0.843 B_Naive2 L2
ENSG00000235162 C12orf75 362340 sc-eQTL 3.95e-01 0.0997 0.117 0.843 B_Naive2 L2
ENSG00000013503 POLR3B -760118 sc-eQTL 6.32e-01 -0.0577 0.12 0.841 CD4_CTL L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 2.42e-01 -0.116 0.0989 0.841 CD4_CTL L2
ENSG00000136044 APPL2 361427 sc-eQTL 7.93e-01 -0.0325 0.124 0.841 CD4_CTL L2
ENSG00000136051 WASHC4 490306 sc-eQTL 1.65e-01 0.164 0.118 0.841 CD4_CTL L2
ENSG00000151131 C12orf45 611314 sc-eQTL 3.38e-01 0.114 0.119 0.841 CD4_CTL L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 6.38e-01 0.0591 0.125 0.841 CD4_CTL L2
ENSG00000235162 C12orf75 362340 sc-eQTL 6.24e-01 -0.0353 0.0719 0.841 CD4_CTL L2
ENSG00000013503 POLR3B -760118 sc-eQTL 2.08e-01 -0.119 0.0939 0.844 CD4_Naive L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 9.42e-01 -0.00589 0.0809 0.844 CD4_Naive L2
ENSG00000136044 APPL2 361427 sc-eQTL 5.31e-01 0.0542 0.0862 0.844 CD4_Naive L2
ENSG00000136051 WASHC4 490306 sc-eQTL 6.45e-01 0.0392 0.085 0.844 CD4_Naive L2
ENSG00000151131 C12orf45 611314 sc-eQTL 5.62e-01 -0.072 0.124 0.844 CD4_Naive L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 1.75e-01 0.11 0.0807 0.844 CD4_Naive L2
ENSG00000235162 C12orf75 362340 sc-eQTL 7.99e-01 0.0281 0.111 0.844 CD4_Naive L2
ENSG00000013503 POLR3B -760118 sc-eQTL 9.03e-01 -0.013 0.107 0.844 CD4_TCM L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 6.40e-01 -0.0367 0.0782 0.844 CD4_TCM L2
ENSG00000136044 APPL2 361427 sc-eQTL 3.30e-01 -0.0993 0.102 0.844 CD4_TCM L2
ENSG00000136051 WASHC4 490306 sc-eQTL 9.19e-01 -0.0107 0.105 0.844 CD4_TCM L2
ENSG00000151131 C12orf45 611314 sc-eQTL 5.00e-01 -0.0875 0.129 0.844 CD4_TCM L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 1.96e-01 -0.111 0.0858 0.844 CD4_TCM L2
ENSG00000235162 C12orf75 362340 sc-eQTL 7.37e-01 -0.0286 0.0853 0.844 CD4_TCM L2
ENSG00000013503 POLR3B -760118 sc-eQTL 4.41e-01 0.103 0.134 0.844 CD4_TEM L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 3.11e-01 0.107 0.105 0.844 CD4_TEM L2
ENSG00000136044 APPL2 361427 sc-eQTL 6.89e-01 0.0461 0.115 0.844 CD4_TEM L2
ENSG00000136051 WASHC4 490306 sc-eQTL 6.84e-01 0.0531 0.13 0.844 CD4_TEM L2
ENSG00000151131 C12orf45 611314 sc-eQTL 8.49e-01 0.024 0.126 0.844 CD4_TEM L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 3.61e-01 0.0962 0.105 0.844 CD4_TEM L2
ENSG00000235162 C12orf75 362340 sc-eQTL 4.10e-01 -0.0695 0.0843 0.844 CD4_TEM L2
ENSG00000013503 POLR3B -760118 sc-eQTL 6.02e-01 -0.0633 0.121 0.844 CD8_CTL L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 4.10e-01 0.0889 0.108 0.844 CD8_CTL L2
ENSG00000136044 APPL2 361427 sc-eQTL 3.55e-01 -0.0945 0.102 0.844 CD8_CTL L2
ENSG00000136051 WASHC4 490306 sc-eQTL 8.15e-01 0.0266 0.113 0.844 CD8_CTL L2
ENSG00000151131 C12orf45 611314 sc-eQTL 3.38e-01 0.128 0.133 0.844 CD8_CTL L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 3.92e-01 -0.0992 0.116 0.844 CD8_CTL L2
ENSG00000235162 C12orf75 362340 sc-eQTL 3.74e-01 -0.0762 0.0854 0.844 CD8_CTL L2
ENSG00000013503 POLR3B -760118 sc-eQTL 9.09e-01 0.013 0.114 0.844 CD8_Naive L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 9.60e-01 0.00512 0.101 0.844 CD8_Naive L2
ENSG00000136044 APPL2 361427 sc-eQTL 9.80e-01 -0.00264 0.104 0.844 CD8_Naive L2
ENSG00000136051 WASHC4 490306 sc-eQTL 8.77e-01 -0.0175 0.113 0.844 CD8_Naive L2
ENSG00000151131 C12orf45 611314 sc-eQTL 9.65e-01 -0.00537 0.122 0.844 CD8_Naive L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 7.33e-01 -0.031 0.0906 0.844 CD8_Naive L2
ENSG00000235162 C12orf75 362340 sc-eQTL 5.39e-01 -0.0596 0.0969 0.844 CD8_Naive L2
ENSG00000013503 POLR3B -760118 sc-eQTL 6.00e-01 -0.0684 0.13 0.847 CD8_TCM L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 2.01e-01 0.145 0.113 0.847 CD8_TCM L2
ENSG00000136044 APPL2 361427 sc-eQTL 5.85e-01 -0.0698 0.128 0.847 CD8_TCM L2
ENSG00000136051 WASHC4 490306 sc-eQTL 4.24e-01 0.103 0.128 0.847 CD8_TCM L2
ENSG00000151131 C12orf45 611314 sc-eQTL 7.72e-01 0.0397 0.137 0.847 CD8_TCM L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 2.74e-01 -0.12 0.109 0.847 CD8_TCM L2
ENSG00000235162 C12orf75 362340 sc-eQTL 8.10e-01 0.0292 0.121 0.847 CD8_TCM L2
ENSG00000013503 POLR3B -760118 sc-eQTL 1.29e-01 0.196 0.128 0.838 CD8_TEM L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 5.89e-01 0.0642 0.119 0.838 CD8_TEM L2
ENSG00000136044 APPL2 361427 sc-eQTL 9.16e-01 -0.0138 0.131 0.838 CD8_TEM L2
ENSG00000136051 WASHC4 490306 sc-eQTL 3.33e-01 0.131 0.135 0.838 CD8_TEM L2
ENSG00000151131 C12orf45 611314 sc-eQTL 1.27e-01 0.201 0.131 0.838 CD8_TEM L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 1.00e+00 1.2e-05 0.124 0.838 CD8_TEM L2
ENSG00000235162 C12orf75 362340 sc-eQTL 2.54e-01 0.115 0.1 0.838 CD8_TEM L2
ENSG00000013503 POLR3B -760118 sc-eQTL 1.89e-02 0.285 0.12 0.842 MAIT L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 8.71e-01 -0.0178 0.11 0.842 MAIT L2
ENSG00000136044 APPL2 361427 sc-eQTL 2.97e-01 0.122 0.117 0.842 MAIT L2
ENSG00000136051 WASHC4 490306 sc-eQTL 7.63e-01 -0.0416 0.138 0.842 MAIT L2
ENSG00000151131 C12orf45 611314 sc-eQTL 8.33e-01 0.0261 0.124 0.842 MAIT L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 6.22e-01 -0.0551 0.112 0.842 MAIT L2
ENSG00000235162 C12orf75 362340 sc-eQTL 9.93e-01 -0.000856 0.0928 0.842 MAIT L2
ENSG00000013503 POLR3B -760118 sc-eQTL 7.25e-01 -0.0435 0.124 0.84 NK_CD56bright L2
ENSG00000074590 NUAK1 -542403 sc-eQTL 4.52e-01 -0.0812 0.108 0.84 NK_CD56bright L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 2.26e-01 -0.122 0.101 0.84 NK_CD56bright L2
ENSG00000136044 APPL2 361427 sc-eQTL 1.93e-02 -0.28 0.119 0.84 NK_CD56bright L2
ENSG00000136051 WASHC4 490306 sc-eQTL 5.92e-01 -0.0667 0.124 0.84 NK_CD56bright L2
ENSG00000151131 C12orf45 611314 sc-eQTL 7.75e-02 -0.237 0.134 0.84 NK_CD56bright L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 5.91e-01 0.0695 0.129 0.84 NK_CD56bright L2
ENSG00000235162 C12orf75 362340 sc-eQTL 1.04e-01 -0.189 0.116 0.84 NK_CD56bright L2
ENSG00000013503 POLR3B -760118 sc-eQTL 7.27e-01 0.0391 0.112 0.843 NK_CD56dim L2
ENSG00000074590 NUAK1 -542403 sc-eQTL 7.13e-01 -0.0402 0.109 0.843 NK_CD56dim L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 8.98e-01 0.0144 0.112 0.843 NK_CD56dim L2
ENSG00000136044 APPL2 361427 sc-eQTL 7.11e-01 -0.0373 0.101 0.843 NK_CD56dim L2
ENSG00000136051 WASHC4 490306 sc-eQTL 8.91e-01 -0.0151 0.11 0.843 NK_CD56dim L2
ENSG00000151131 C12orf45 611314 sc-eQTL 1.21e-01 -0.204 0.132 0.843 NK_CD56dim L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 8.00e-01 -0.0249 0.0982 0.843 NK_CD56dim L2
ENSG00000235162 C12orf75 362340 sc-eQTL 6.06e-01 -0.0411 0.0796 0.843 NK_CD56dim L2
ENSG00000013503 POLR3B -760118 sc-eQTL 8.45e-01 -0.0243 0.124 0.842 NK_HLA L2
ENSG00000074590 NUAK1 -542403 sc-eQTL 3.79e-01 -0.106 0.121 0.842 NK_HLA L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 6.10e-02 0.208 0.111 0.842 NK_HLA L2
ENSG00000136044 APPL2 361427 sc-eQTL 6.66e-01 0.0532 0.123 0.842 NK_HLA L2
ENSG00000136051 WASHC4 490306 sc-eQTL 1.86e-01 0.168 0.127 0.842 NK_HLA L2
ENSG00000151131 C12orf45 611314 sc-eQTL 6.53e-01 -0.0576 0.128 0.842 NK_HLA L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 3.25e-01 -0.124 0.125 0.842 NK_HLA L2
ENSG00000235162 C12orf75 362340 sc-eQTL 9.38e-01 -0.00715 0.092 0.842 NK_HLA L2
ENSG00000013503 POLR3B -760118 sc-eQTL 8.78e-01 0.0188 0.123 0.843 NK_cytokine L2
ENSG00000074590 NUAK1 -542403 sc-eQTL 9.82e-01 0.0026 0.114 0.843 NK_cytokine L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 8.58e-01 0.0201 0.112 0.843 NK_cytokine L2
ENSG00000136044 APPL2 361427 sc-eQTL 3.19e-01 0.119 0.119 0.843 NK_cytokine L2
ENSG00000136051 WASHC4 490306 sc-eQTL 2.28e-01 0.138 0.115 0.843 NK_cytokine L2
ENSG00000151131 C12orf45 611314 sc-eQTL 8.81e-01 0.019 0.127 0.843 NK_cytokine L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 7.11e-01 0.0374 0.1 0.843 NK_cytokine L2
ENSG00000235162 C12orf75 362340 sc-eQTL 5.76e-01 0.0473 0.0844 0.843 NK_cytokine L2
ENSG00000013503 POLR3B -760118 sc-eQTL 8.38e-01 -0.0338 0.165 0.863 PB L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 9.45e-01 -0.00638 0.0927 0.863 PB L2
ENSG00000136044 APPL2 361427 sc-eQTL 4.81e-01 -0.118 0.167 0.863 PB L2
ENSG00000136051 WASHC4 490306 sc-eQTL 2.25e-01 0.173 0.142 0.863 PB L2
ENSG00000136052 SLC41A2 638886 sc-eQTL 1.49e-01 -0.219 0.151 0.863 PB L2
ENSG00000151131 C12orf45 611314 sc-eQTL 6.73e-01 -0.0633 0.15 0.863 PB L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 1.85e-01 -0.205 0.154 0.863 PB L2
ENSG00000235162 C12orf75 362340 sc-eQTL 8.04e-01 0.0261 0.105 0.863 PB L2
ENSG00000013503 POLR3B -760118 sc-eQTL 2.24e-01 0.152 0.125 0.85 Pro_T L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 2.33e-01 0.0778 0.0651 0.85 Pro_T L2
ENSG00000136044 APPL2 361427 sc-eQTL 4.41e-02 0.238 0.117 0.85 Pro_T L2
ENSG00000136051 WASHC4 490306 sc-eQTL 1.25e-01 0.202 0.131 0.85 Pro_T L2
ENSG00000151131 C12orf45 611314 sc-eQTL 4.24e-01 0.0806 0.101 0.85 Pro_T L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 2.08e-01 -0.127 0.1 0.85 Pro_T L2
ENSG00000235162 C12orf75 362340 sc-eQTL 1.74e-01 -0.114 0.0838 0.85 Pro_T L2
ENSG00000013503 POLR3B -760118 sc-eQTL 7.69e-01 -0.0368 0.126 0.844 Treg L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 4.11e-01 0.0762 0.0926 0.844 Treg L2
ENSG00000136044 APPL2 361427 sc-eQTL 3.78e-01 -0.0976 0.11 0.844 Treg L2
ENSG00000136051 WASHC4 490306 sc-eQTL 5.70e-01 -0.07 0.123 0.844 Treg L2
ENSG00000151131 C12orf45 611314 sc-eQTL 2.48e-01 -0.143 0.123 0.844 Treg L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 5.00e-01 -0.0674 0.0999 0.844 Treg L2
ENSG00000235162 C12orf75 362340 sc-eQTL 7.47e-01 -0.0258 0.08 0.844 Treg L2
ENSG00000013503 POLR3B -760118 sc-eQTL 6.74e-01 -0.0494 0.117 0.829 cDC L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 9.14e-01 -0.00939 0.087 0.829 cDC L2
ENSG00000136044 APPL2 361427 sc-eQTL 2.74e-01 0.135 0.123 0.829 cDC L2
ENSG00000136051 WASHC4 490306 sc-eQTL 2.53e-01 0.126 0.11 0.829 cDC L2
ENSG00000136052 SLC41A2 638886 sc-eQTL 1.07e-01 0.155 0.0955 0.829 cDC L2
ENSG00000151131 C12orf45 611314 sc-eQTL 1.86e-01 -0.113 0.0851 0.829 cDC L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 3.21e-01 -0.129 0.129 0.829 cDC L2
ENSG00000235162 C12orf75 362340 sc-eQTL 5.03e-01 -0.0621 0.0925 0.829 cDC L2
ENSG00000013503 POLR3B -760118 sc-eQTL 1.68e-01 -0.163 0.118 0.844 cMono_IL1B L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 7.74e-01 0.0234 0.0813 0.844 cMono_IL1B L2
ENSG00000136044 APPL2 361427 sc-eQTL 5.47e-01 -0.0739 0.122 0.844 cMono_IL1B L2
ENSG00000136051 WASHC4 490306 sc-eQTL 7.58e-01 0.0195 0.0631 0.844 cMono_IL1B L2
ENSG00000151131 C12orf45 611314 sc-eQTL 2.66e-01 -0.114 0.103 0.844 cMono_IL1B L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 8.75e-01 0.0153 0.0971 0.844 cMono_IL1B L2
ENSG00000235162 C12orf75 362340 sc-eQTL 1.23e-01 0.175 0.113 0.844 cMono_IL1B L2
ENSG00000013503 POLR3B -760118 sc-eQTL 1.58e-01 0.171 0.121 0.844 cMono_S100A L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 6.01e-01 0.0464 0.0886 0.844 cMono_S100A L2
ENSG00000136044 APPL2 361427 sc-eQTL 4.57e-01 0.0977 0.131 0.844 cMono_S100A L2
ENSG00000136051 WASHC4 490306 sc-eQTL 4.74e-01 0.0655 0.0914 0.844 cMono_S100A L2
ENSG00000151131 C12orf45 611314 sc-eQTL 5.71e-01 0.062 0.109 0.844 cMono_S100A L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 5.09e-01 -0.0687 0.104 0.844 cMono_S100A L2
ENSG00000235162 C12orf75 362340 sc-eQTL 7.75e-01 0.0322 0.112 0.844 cMono_S100A L2
ENSG00000013503 POLR3B -760118 sc-eQTL 1.81e-01 0.18 0.133 0.824 gdT L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 9.25e-01 0.012 0.128 0.824 gdT L2
ENSG00000136044 APPL2 361427 sc-eQTL 7.01e-01 -0.0487 0.127 0.824 gdT L2
ENSG00000136051 WASHC4 490306 sc-eQTL 9.87e-01 -0.00253 0.149 0.824 gdT L2
ENSG00000151131 C12orf45 611314 sc-eQTL 3.16e-02 -0.318 0.146 0.824 gdT L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 6.82e-01 0.0571 0.139 0.824 gdT L2
ENSG00000235162 C12orf75 362340 sc-eQTL 2.19e-01 -0.145 0.117 0.824 gdT L2
ENSG00000013503 POLR3B -760118 sc-eQTL 4.36e-01 0.0916 0.117 0.842 intMono L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 9.96e-01 0.000586 0.12 0.842 intMono L2
ENSG00000136044 APPL2 361427 sc-eQTL 8.77e-01 0.0195 0.126 0.842 intMono L2
ENSG00000136051 WASHC4 490306 sc-eQTL 3.09e-01 -0.108 0.106 0.842 intMono L2
ENSG00000151131 C12orf45 611314 sc-eQTL 3.07e-01 -0.131 0.128 0.842 intMono L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 7.14e-01 0.0493 0.134 0.842 intMono L2
ENSG00000235162 C12orf75 362340 sc-eQTL 3.03e-01 -0.114 0.111 0.842 intMono L2
ENSG00000013503 POLR3B -760118 sc-eQTL 3.62e-01 -0.102 0.111 0.846 ncMono L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 5.88e-01 0.0625 0.115 0.846 ncMono L2
ENSG00000136044 APPL2 361427 sc-eQTL 5.39e-02 0.226 0.117 0.846 ncMono L2
ENSG00000136051 WASHC4 490306 sc-eQTL 8.49e-01 0.0151 0.0794 0.846 ncMono L2
ENSG00000151131 C12orf45 611314 sc-eQTL 6.75e-01 0.0535 0.127 0.846 ncMono L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 3.12e-01 0.114 0.113 0.846 ncMono L2
ENSG00000235162 C12orf75 362340 sc-eQTL 7.47e-01 -0.0398 0.123 0.846 ncMono L2
ENSG00000013503 POLR3B -760118 sc-eQTL 2.36e-01 0.157 0.132 0.831 pDC L2
ENSG00000136026 CKAP4 -706649 sc-eQTL 4.02e-01 0.0714 0.085 0.831 pDC L2
ENSG00000136044 APPL2 361427 sc-eQTL 3.05e-01 0.134 0.131 0.831 pDC L2
ENSG00000136051 WASHC4 490306 sc-eQTL 8.90e-01 -0.0173 0.124 0.831 pDC L2
ENSG00000136052 SLC41A2 638886 sc-eQTL 4.62e-01 0.0712 0.0966 0.831 pDC L2
ENSG00000151131 C12orf45 611314 sc-eQTL 2.04e-01 -0.107 0.0839 0.831 pDC L2
ENSG00000166046 TCP11L2 -704299 sc-eQTL 7.12e-01 -0.0473 0.128 0.831 pDC L2
ENSG00000235162 C12orf75 362340 sc-eQTL 7.24e-02 0.145 0.0804 0.831 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -760118 sc-eQTL 5.92e-01 -0.0689 0.128 0.844 B_Memory LOneK1K
ENSG00000136026 CKAP4 -706649 sc-eQTL 8.01e-01 0.022 0.0868 0.844 B_Memory LOneK1K
ENSG00000136044 APPL2 361427 sc-eQTL 5.81e-01 -0.0605 0.109 0.844 B_Memory LOneK1K
ENSG00000136051 WASHC4 490306 sc-eQTL 8.36e-01 0.0162 0.0783 0.844 B_Memory LOneK1K
ENSG00000136052 SLC41A2 638886 sc-eQTL 8.08e-01 -0.0276 0.114 0.844 B_Memory LOneK1K
ENSG00000151131 C12orf45 611314 sc-eQTL 9.58e-01 -0.00621 0.119 0.844 B_Memory LOneK1K
ENSG00000166046 TCP11L2 -704299 sc-eQTL 7.66e-01 0.0314 0.105 0.844 B_Memory LOneK1K
ENSG00000235162 C12orf75 362340 sc-eQTL 2.39e-01 -0.127 0.107 0.844 B_Memory LOneK1K
ENSG00000013503 POLR3B -760118 sc-eQTL 2.86e-01 -0.128 0.12 0.844 B_Naive LOneK1K
ENSG00000136026 CKAP4 -706649 sc-eQTL 8.78e-02 -0.152 0.0889 0.844 B_Naive LOneK1K
ENSG00000136044 APPL2 361427 sc-eQTL 3.03e-01 -0.0944 0.0915 0.844 B_Naive LOneK1K
ENSG00000136051 WASHC4 490306 sc-eQTL 4.51e-01 -0.059 0.0781 0.844 B_Naive LOneK1K
ENSG00000136052 SLC41A2 638886 sc-eQTL 9.20e-01 0.00968 0.0958 0.844 B_Naive LOneK1K
ENSG00000151131 C12orf45 611314 sc-eQTL 9.24e-01 -0.0124 0.13 0.844 B_Naive LOneK1K
ENSG00000166046 TCP11L2 -704299 sc-eQTL 4.95e-01 0.0533 0.078 0.844 B_Naive LOneK1K
ENSG00000235162 C12orf75 362340 sc-eQTL 6.35e-01 0.0523 0.11 0.844 B_Naive LOneK1K
ENSG00000013503 POLR3B -760118 sc-eQTL 6.23e-01 -0.055 0.112 0.844 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 -706649 sc-eQTL 6.21e-01 0.0384 0.0776 0.844 CD14_Mono LOneK1K
ENSG00000136044 APPL2 361427 sc-eQTL 8.85e-01 -0.0174 0.12 0.844 CD14_Mono LOneK1K
ENSG00000136051 WASHC4 490306 sc-eQTL 7.95e-01 0.0153 0.0588 0.844 CD14_Mono LOneK1K
ENSG00000151131 C12orf45 611314 sc-eQTL 5.51e-01 -0.0573 0.096 0.844 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 -704299 sc-eQTL 9.11e-01 -0.00929 0.0826 0.844 CD14_Mono LOneK1K
ENSG00000235162 C12orf75 362340 sc-eQTL 1.48e-01 0.158 0.109 0.844 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -760118 sc-eQTL 5.76e-01 -0.0597 0.107 0.845 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 -706649 sc-eQTL 8.11e-01 -0.0252 0.105 0.845 CD16_Mono LOneK1K
ENSG00000136044 APPL2 361427 sc-eQTL 2.17e-01 0.146 0.118 0.845 CD16_Mono LOneK1K
ENSG00000136051 WASHC4 490306 sc-eQTL 3.97e-01 -0.0594 0.07 0.845 CD16_Mono LOneK1K
ENSG00000151131 C12orf45 611314 sc-eQTL 7.57e-01 -0.0395 0.127 0.845 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 -704299 sc-eQTL 7.41e-02 0.194 0.108 0.845 CD16_Mono LOneK1K
ENSG00000235162 C12orf75 362340 sc-eQTL 7.80e-01 -0.0349 0.125 0.845 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -760118 sc-eQTL 3.69e-01 0.101 0.112 0.843 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 -542403 sc-eQTL 7.10e-01 -0.0402 0.108 0.843 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 -706649 sc-eQTL 7.97e-01 0.0265 0.103 0.843 NK_CD56dim LOneK1K
ENSG00000136044 APPL2 361427 sc-eQTL 6.65e-01 0.0417 0.0961 0.843 NK_CD56dim LOneK1K
ENSG00000136051 WASHC4 490306 sc-eQTL 3.63e-01 0.0958 0.105 0.843 NK_CD56dim LOneK1K
ENSG00000151131 C12orf45 611314 sc-eQTL 6.12e-01 -0.0644 0.127 0.843 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 -704299 sc-eQTL 8.56e-01 0.016 0.0879 0.843 NK_CD56dim LOneK1K
ENSG00000235162 C12orf75 362340 sc-eQTL 7.23e-01 -0.0261 0.0736 0.843 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000166046 TCP11L2 -704299 eQTL 0.00559 -0.0535 0.0193 0.0 0.0 0.168

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000277715 \N -653129 5.14e-07 2.4e-07 7.97e-08 2.43e-07 1.11e-07 1.25e-07 3.44e-07 8.86e-08 2.66e-07 1.6e-07 3.21e-07 2.28e-07 3.95e-07 8.55e-08 1.01e-07 1.49e-07 9.53e-08 2.9e-07 9.97e-08 7.49e-08 1.59e-07 2.45e-07 2.26e-07 5.6e-08 3.41e-07 2.29e-07 1.74e-07 1.61e-07 1.98e-07 1.85e-07 1.71e-07 4.75e-08 4.98e-08 1.24e-07 1.07e-07 5.23e-08 6.57e-08 5.92e-08 4.82e-08 8.61e-08 3.64e-08 2.19e-07 3.4e-08 1.43e-08 4.91e-08 1.05e-08 9.34e-08 0.0 4.68e-08