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Genes within 1Mb (chr12:105525624:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -832124 sc-eQTL 1.74e-01 -0.111 0.0813 0.415 B L1
ENSG00000136026 CKAP4 -778655 sc-eQTL 1.39e-01 -0.0624 0.042 0.415 B L1
ENSG00000136044 APPL2 289421 sc-eQTL 7.43e-01 0.0203 0.0621 0.415 B L1
ENSG00000136051 WASHC4 418300 sc-eQTL 5.96e-01 0.021 0.0396 0.415 B L1
ENSG00000136052 SLC41A2 566880 sc-eQTL 4.23e-01 0.0505 0.063 0.415 B L1
ENSG00000151131 C12orf45 539308 sc-eQTL 7.16e-01 -0.0277 0.0762 0.415 B L1
ENSG00000166046 TCP11L2 -776305 sc-eQTL 6.05e-01 0.0263 0.0507 0.415 B L1
ENSG00000235162 C12orf75 290334 sc-eQTL 7.28e-04 0.181 0.0529 0.415 B L1
ENSG00000013503 POLR3B -832124 sc-eQTL 5.57e-01 -0.0352 0.0599 0.415 CD4T L1
ENSG00000136026 CKAP4 -778655 sc-eQTL 6.92e-01 -0.0203 0.0512 0.415 CD4T L1
ENSG00000136044 APPL2 289421 sc-eQTL 9.66e-02 -0.0978 0.0586 0.415 CD4T L1
ENSG00000136051 WASHC4 418300 sc-eQTL 6.82e-01 -0.0239 0.0581 0.415 CD4T L1
ENSG00000151131 C12orf45 539308 sc-eQTL 9.76e-01 0.00238 0.0804 0.415 CD4T L1
ENSG00000166046 TCP11L2 -776305 sc-eQTL 4.97e-01 0.0354 0.052 0.415 CD4T L1
ENSG00000235162 C12orf75 290334 sc-eQTL 6.62e-01 -0.0197 0.045 0.415 CD4T L1
ENSG00000013503 POLR3B -832124 sc-eQTL 1.44e-01 0.104 0.0712 0.415 CD8T L1
ENSG00000136026 CKAP4 -778655 sc-eQTL 9.68e-01 -0.00191 0.0473 0.415 CD8T L1
ENSG00000136044 APPL2 289421 sc-eQTL 1.46e-01 -0.0983 0.0674 0.415 CD8T L1
ENSG00000136051 WASHC4 418300 sc-eQTL 6.83e-01 0.0309 0.0756 0.415 CD8T L1
ENSG00000151131 C12orf45 539308 sc-eQTL 1.53e-01 -0.0978 0.0681 0.415 CD8T L1
ENSG00000166046 TCP11L2 -776305 sc-eQTL 8.31e-01 0.00896 0.042 0.415 CD8T L1
ENSG00000235162 C12orf75 290334 sc-eQTL 8.09e-01 -0.00729 0.0301 0.415 CD8T L1
ENSG00000013503 POLR3B -832124 sc-eQTL 1.01e-01 0.138 0.0835 0.423 DC L1
ENSG00000136026 CKAP4 -778655 sc-eQTL 4.90e-01 -0.0399 0.0578 0.423 DC L1
ENSG00000136044 APPL2 289421 sc-eQTL 7.67e-03 -0.229 0.0848 0.423 DC L1
ENSG00000136051 WASHC4 418300 sc-eQTL 7.39e-02 -0.124 0.0691 0.423 DC L1
ENSG00000136052 SLC41A2 566880 sc-eQTL 2.44e-01 0.0688 0.0589 0.423 DC L1
ENSG00000151131 C12orf45 539308 sc-eQTL 9.78e-01 0.00146 0.0528 0.423 DC L1
ENSG00000166046 TCP11L2 -776305 sc-eQTL 3.42e-01 0.0825 0.0867 0.423 DC L1
ENSG00000235162 C12orf75 290334 sc-eQTL 3.30e-01 -0.0345 0.0353 0.423 DC L1
ENSG00000013503 POLR3B -832124 sc-eQTL 6.37e-01 0.0341 0.0722 0.415 Mono L1
ENSG00000136026 CKAP4 -778655 sc-eQTL 3.33e-01 -0.0501 0.0517 0.415 Mono L1
ENSG00000136044 APPL2 289421 sc-eQTL 3.05e-01 -0.084 0.0817 0.415 Mono L1
ENSG00000136051 WASHC4 418300 sc-eQTL 1.77e-01 -0.0543 0.0401 0.415 Mono L1
ENSG00000151131 C12orf45 539308 sc-eQTL 8.83e-01 -0.0104 0.0707 0.415 Mono L1
ENSG00000166046 TCP11L2 -776305 sc-eQTL 6.97e-01 0.0235 0.0601 0.415 Mono L1
ENSG00000235162 C12orf75 290334 sc-eQTL 4.50e-01 0.0593 0.0784 0.415 Mono L1
ENSG00000013503 POLR3B -832124 sc-eQTL 1.31e-01 0.118 0.078 0.416 NK L1
ENSG00000074590 NUAK1 -614409 sc-eQTL 6.40e-01 0.0362 0.0772 0.416 NK L1
ENSG00000136026 CKAP4 -778655 sc-eQTL 7.19e-01 0.0253 0.0702 0.416 NK L1
ENSG00000136044 APPL2 289421 sc-eQTL 5.10e-01 -0.0456 0.0692 0.416 NK L1
ENSG00000136051 WASHC4 418300 sc-eQTL 8.28e-01 -0.0157 0.0722 0.416 NK L1
ENSG00000151131 C12orf45 539308 sc-eQTL 4.02e-01 -0.0744 0.0886 0.416 NK L1
ENSG00000166046 TCP11L2 -776305 sc-eQTL 8.84e-01 0.00933 0.0639 0.416 NK L1
ENSG00000235162 C12orf75 290334 sc-eQTL 8.64e-01 0.00896 0.0524 0.416 NK L1
ENSG00000013503 POLR3B -832124 sc-eQTL 8.46e-01 -0.0172 0.0882 0.415 Other_T L1
ENSG00000136026 CKAP4 -778655 sc-eQTL 9.59e-01 -0.00282 0.0553 0.415 Other_T L1
ENSG00000136044 APPL2 289421 sc-eQTL 3.27e-01 -0.0707 0.0719 0.415 Other_T L1
ENSG00000136051 WASHC4 418300 sc-eQTL 9.42e-01 -0.0069 0.0946 0.415 Other_T L1
ENSG00000151131 C12orf45 539308 sc-eQTL 6.01e-01 0.0349 0.0666 0.415 Other_T L1
ENSG00000166046 TCP11L2 -776305 sc-eQTL 6.30e-01 0.0327 0.0678 0.415 Other_T L1
ENSG00000235162 C12orf75 290334 sc-eQTL 7.82e-01 0.0153 0.0554 0.415 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -832124 sc-eQTL 5.66e-01 0.0529 0.0921 0.393 B_Activated L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 1.13e-01 -0.138 0.087 0.393 B_Activated L2
ENSG00000136044 APPL2 289421 sc-eQTL 3.31e-01 0.0961 0.0985 0.393 B_Activated L2
ENSG00000136051 WASHC4 418300 sc-eQTL 1.46e-01 -0.136 0.0933 0.393 B_Activated L2
ENSG00000136052 SLC41A2 566880 sc-eQTL 4.40e-01 -0.0542 0.07 0.393 B_Activated L2
ENSG00000151131 C12orf45 539308 sc-eQTL 6.44e-01 -0.0451 0.0974 0.393 B_Activated L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 4.92e-01 -0.0672 0.0974 0.393 B_Activated L2
ENSG00000235162 C12orf75 290334 sc-eQTL 1.71e-01 0.129 0.0941 0.393 B_Activated L2
ENSG00000013503 POLR3B -832124 sc-eQTL 8.17e-01 -0.0219 0.0944 0.412 B_Intermediate L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 2.92e-02 -0.152 0.0691 0.412 B_Intermediate L2
ENSG00000136044 APPL2 289421 sc-eQTL 2.25e-01 0.101 0.0828 0.412 B_Intermediate L2
ENSG00000136051 WASHC4 418300 sc-eQTL 6.59e-01 -0.0318 0.0718 0.412 B_Intermediate L2
ENSG00000136052 SLC41A2 566880 sc-eQTL 2.24e-01 0.0959 0.0787 0.412 B_Intermediate L2
ENSG00000151131 C12orf45 539308 sc-eQTL 1.07e-01 0.147 0.0907 0.412 B_Intermediate L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 2.30e-01 0.0973 0.0809 0.412 B_Intermediate L2
ENSG00000235162 C12orf75 290334 sc-eQTL 3.52e-02 0.178 0.084 0.412 B_Intermediate L2
ENSG00000013503 POLR3B -832124 sc-eQTL 5.81e-01 0.0517 0.0934 0.416 B_Memory L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 2.27e-01 -0.0953 0.0787 0.416 B_Memory L2
ENSG00000136044 APPL2 289421 sc-eQTL 5.11e-01 0.056 0.0852 0.416 B_Memory L2
ENSG00000136051 WASHC4 418300 sc-eQTL 3.81e-01 0.0617 0.0703 0.416 B_Memory L2
ENSG00000136052 SLC41A2 566880 sc-eQTL 4.74e-01 0.0592 0.0825 0.416 B_Memory L2
ENSG00000151131 C12orf45 539308 sc-eQTL 6.77e-01 0.0398 0.0954 0.416 B_Memory L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 8.06e-01 0.0194 0.0786 0.416 B_Memory L2
ENSG00000235162 C12orf75 290334 sc-eQTL 7.33e-01 0.0247 0.0723 0.416 B_Memory L2
ENSG00000013503 POLR3B -832124 sc-eQTL 3.98e-01 -0.0722 0.0853 0.415 B_Naive1 L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 4.54e-02 0.128 0.0638 0.415 B_Naive1 L2
ENSG00000136044 APPL2 289421 sc-eQTL 7.91e-01 0.0191 0.0721 0.415 B_Naive1 L2
ENSG00000136051 WASHC4 418300 sc-eQTL 6.06e-01 -0.0334 0.0648 0.415 B_Naive1 L2
ENSG00000136052 SLC41A2 566880 sc-eQTL 6.26e-01 0.0366 0.0749 0.415 B_Naive1 L2
ENSG00000151131 C12orf45 539308 sc-eQTL 5.63e-01 -0.054 0.093 0.415 B_Naive1 L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 9.96e-01 -0.000331 0.0632 0.415 B_Naive1 L2
ENSG00000235162 C12orf75 290334 sc-eQTL 1.09e-02 0.21 0.0817 0.415 B_Naive1 L2
ENSG00000013503 POLR3B -832124 sc-eQTL 2.38e-01 -0.109 0.0921 0.414 B_Naive2 L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 2.09e-01 0.101 0.0799 0.414 B_Naive2 L2
ENSG00000136044 APPL2 289421 sc-eQTL 6.46e-01 0.0352 0.0767 0.414 B_Naive2 L2
ENSG00000136051 WASHC4 418300 sc-eQTL 1.59e-01 0.0975 0.069 0.414 B_Naive2 L2
ENSG00000136052 SLC41A2 566880 sc-eQTL 9.69e-02 -0.121 0.0723 0.414 B_Naive2 L2
ENSG00000151131 C12orf45 539308 sc-eQTL 2.68e-01 -0.109 0.0982 0.414 B_Naive2 L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 1.44e-01 0.0997 0.068 0.414 B_Naive2 L2
ENSG00000235162 C12orf75 290334 sc-eQTL 8.45e-01 0.0167 0.085 0.414 B_Naive2 L2
ENSG00000013503 POLR3B -832124 sc-eQTL 3.88e-01 0.076 0.0878 0.423 CD4_CTL L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 1.18e-02 0.182 0.0715 0.423 CD4_CTL L2
ENSG00000136044 APPL2 289421 sc-eQTL 3.65e-01 -0.0819 0.0902 0.423 CD4_CTL L2
ENSG00000136051 WASHC4 418300 sc-eQTL 7.74e-01 0.0249 0.0867 0.423 CD4_CTL L2
ENSG00000151131 C12orf45 539308 sc-eQTL 9.28e-01 -0.00791 0.0873 0.423 CD4_CTL L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 4.57e-01 0.0683 0.0916 0.423 CD4_CTL L2
ENSG00000235162 C12orf75 290334 sc-eQTL 6.58e-01 0.0233 0.0526 0.423 CD4_CTL L2
ENSG00000013503 POLR3B -832124 sc-eQTL 4.56e-01 -0.05 0.0669 0.415 CD4_Naive L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 3.00e-01 -0.0596 0.0574 0.415 CD4_Naive L2
ENSG00000136044 APPL2 289421 sc-eQTL 4.81e-02 -0.121 0.0608 0.415 CD4_Naive L2
ENSG00000136051 WASHC4 418300 sc-eQTL 2.82e-01 -0.065 0.0603 0.415 CD4_Naive L2
ENSG00000151131 C12orf45 539308 sc-eQTL 9.86e-01 -0.00158 0.0883 0.415 CD4_Naive L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 8.06e-01 -0.0142 0.0576 0.415 CD4_Naive L2
ENSG00000235162 C12orf75 290334 sc-eQTL 8.57e-01 -0.0142 0.0787 0.415 CD4_Naive L2
ENSG00000013503 POLR3B -832124 sc-eQTL 6.93e-01 -0.0301 0.0761 0.415 CD4_TCM L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 1.47e-01 -0.0811 0.0557 0.415 CD4_TCM L2
ENSG00000136044 APPL2 289421 sc-eQTL 8.00e-01 -0.0185 0.0728 0.415 CD4_TCM L2
ENSG00000136051 WASHC4 418300 sc-eQTL 6.78e-01 -0.0312 0.075 0.415 CD4_TCM L2
ENSG00000151131 C12orf45 539308 sc-eQTL 9.64e-01 -0.00414 0.0926 0.415 CD4_TCM L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 2.80e-01 0.0666 0.0614 0.415 CD4_TCM L2
ENSG00000235162 C12orf75 290334 sc-eQTL 6.86e-01 0.0247 0.0609 0.415 CD4_TCM L2
ENSG00000013503 POLR3B -832124 sc-eQTL 6.23e-01 -0.0466 0.0948 0.415 CD4_TEM L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 7.58e-01 0.023 0.0744 0.415 CD4_TEM L2
ENSG00000136044 APPL2 289421 sc-eQTL 1.12e-01 -0.129 0.081 0.415 CD4_TEM L2
ENSG00000136051 WASHC4 418300 sc-eQTL 7.10e-01 0.0343 0.0921 0.415 CD4_TEM L2
ENSG00000151131 C12orf45 539308 sc-eQTL 6.70e-01 0.038 0.0892 0.415 CD4_TEM L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 3.91e-01 -0.0639 0.0743 0.415 CD4_TEM L2
ENSG00000235162 C12orf75 290334 sc-eQTL 1.39e-01 0.0883 0.0594 0.415 CD4_TEM L2
ENSG00000013503 POLR3B -832124 sc-eQTL 6.32e-01 -0.041 0.0854 0.415 CD8_CTL L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 9.20e-01 -0.00761 0.0761 0.415 CD8_CTL L2
ENSG00000136044 APPL2 289421 sc-eQTL 3.70e-02 -0.149 0.0712 0.415 CD8_CTL L2
ENSG00000136051 WASHC4 418300 sc-eQTL 7.79e-01 -0.0224 0.0796 0.415 CD8_CTL L2
ENSG00000151131 C12orf45 539308 sc-eQTL 2.00e-01 -0.12 0.0937 0.415 CD8_CTL L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 4.46e-01 0.0623 0.0815 0.415 CD8_CTL L2
ENSG00000235162 C12orf75 290334 sc-eQTL 6.89e-01 0.0242 0.0603 0.415 CD8_CTL L2
ENSG00000013503 POLR3B -832124 sc-eQTL 2.95e-01 0.084 0.08 0.415 CD8_Naive L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 8.04e-01 -0.0177 0.0715 0.415 CD8_Naive L2
ENSG00000136044 APPL2 289421 sc-eQTL 8.49e-01 -0.014 0.0735 0.415 CD8_Naive L2
ENSG00000136051 WASHC4 418300 sc-eQTL 1.34e-01 0.119 0.0793 0.415 CD8_Naive L2
ENSG00000151131 C12orf45 539308 sc-eQTL 7.29e-01 -0.0297 0.0857 0.415 CD8_Naive L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 7.98e-01 0.0164 0.0639 0.415 CD8_Naive L2
ENSG00000235162 C12orf75 290334 sc-eQTL 7.88e-01 -0.0184 0.0684 0.415 CD8_Naive L2
ENSG00000013503 POLR3B -832124 sc-eQTL 4.42e-01 0.0715 0.0928 0.428 CD8_TCM L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 4.86e-01 0.0565 0.081 0.428 CD8_TCM L2
ENSG00000136044 APPL2 289421 sc-eQTL 7.15e-01 -0.0333 0.0911 0.428 CD8_TCM L2
ENSG00000136051 WASHC4 418300 sc-eQTL 7.60e-01 0.0281 0.0917 0.428 CD8_TCM L2
ENSG00000151131 C12orf45 539308 sc-eQTL 8.72e-01 0.0157 0.0978 0.428 CD8_TCM L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 6.44e-01 0.0361 0.0781 0.428 CD8_TCM L2
ENSG00000235162 C12orf75 290334 sc-eQTL 4.64e-01 -0.0633 0.0863 0.428 CD8_TCM L2
ENSG00000013503 POLR3B -832124 sc-eQTL 2.21e-01 0.113 0.0917 0.418 CD8_TEM L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 7.38e-01 0.0284 0.0846 0.418 CD8_TEM L2
ENSG00000136044 APPL2 289421 sc-eQTL 6.09e-01 -0.0477 0.0932 0.418 CD8_TEM L2
ENSG00000136051 WASHC4 418300 sc-eQTL 9.90e-01 0.00122 0.0964 0.418 CD8_TEM L2
ENSG00000151131 C12orf45 539308 sc-eQTL 5.18e-02 -0.182 0.0931 0.418 CD8_TEM L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 2.31e-01 -0.106 0.0878 0.418 CD8_TEM L2
ENSG00000235162 C12orf75 290334 sc-eQTL 7.18e-01 -0.026 0.0718 0.418 CD8_TEM L2
ENSG00000013503 POLR3B -832124 sc-eQTL 7.45e-01 -0.0286 0.0876 0.418 MAIT L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 6.45e-01 -0.0363 0.0786 0.418 MAIT L2
ENSG00000136044 APPL2 289421 sc-eQTL 8.23e-02 -0.146 0.0834 0.418 MAIT L2
ENSG00000136051 WASHC4 418300 sc-eQTL 1.52e-01 -0.142 0.0984 0.418 MAIT L2
ENSG00000151131 C12orf45 539308 sc-eQTL 8.90e-01 -0.0123 0.0888 0.418 MAIT L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 3.33e-01 0.0775 0.0799 0.418 MAIT L2
ENSG00000235162 C12orf75 290334 sc-eQTL 9.97e-01 -0.00027 0.0666 0.418 MAIT L2
ENSG00000013503 POLR3B -832124 sc-eQTL 6.46e-01 0.0396 0.086 0.418 NK_CD56bright L2
ENSG00000074590 NUAK1 -614409 sc-eQTL 1.14e-01 0.118 0.0746 0.418 NK_CD56bright L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 2.83e-01 0.0756 0.0702 0.418 NK_CD56bright L2
ENSG00000136044 APPL2 289421 sc-eQTL 1.64e-01 0.117 0.0835 0.418 NK_CD56bright L2
ENSG00000136051 WASHC4 418300 sc-eQTL 2.41e-01 -0.102 0.0863 0.418 NK_CD56bright L2
ENSG00000151131 C12orf45 539308 sc-eQTL 4.53e-01 -0.0705 0.0937 0.418 NK_CD56bright L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 2.42e-01 0.105 0.0895 0.418 NK_CD56bright L2
ENSG00000235162 C12orf75 290334 sc-eQTL 6.23e-01 -0.04 0.0811 0.418 NK_CD56bright L2
ENSG00000013503 POLR3B -832124 sc-eQTL 5.24e-01 0.051 0.0799 0.416 NK_CD56dim L2
ENSG00000074590 NUAK1 -614409 sc-eQTL 9.82e-02 0.129 0.0776 0.416 NK_CD56dim L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 5.00e-01 -0.0542 0.0802 0.416 NK_CD56dim L2
ENSG00000136044 APPL2 289421 sc-eQTL 5.38e-01 -0.0445 0.072 0.416 NK_CD56dim L2
ENSG00000136051 WASHC4 418300 sc-eQTL 6.37e-01 -0.0373 0.0788 0.416 NK_CD56dim L2
ENSG00000151131 C12orf45 539308 sc-eQTL 3.72e-01 0.0846 0.0946 0.416 NK_CD56dim L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 5.26e-01 0.0446 0.0703 0.416 NK_CD56dim L2
ENSG00000235162 C12orf75 290334 sc-eQTL 3.27e-01 0.0559 0.0569 0.416 NK_CD56dim L2
ENSG00000013503 POLR3B -832124 sc-eQTL 3.98e-01 0.0764 0.0902 0.422 NK_HLA L2
ENSG00000074590 NUAK1 -614409 sc-eQTL 6.14e-01 -0.0445 0.0881 0.422 NK_HLA L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 5.64e-01 -0.0469 0.0813 0.422 NK_HLA L2
ENSG00000136044 APPL2 289421 sc-eQTL 5.90e-01 0.0483 0.0896 0.422 NK_HLA L2
ENSG00000136051 WASHC4 418300 sc-eQTL 1.20e-02 0.231 0.0913 0.422 NK_HLA L2
ENSG00000151131 C12orf45 539308 sc-eQTL 7.74e-01 0.0268 0.0934 0.422 NK_HLA L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 7.75e-01 -0.0262 0.0916 0.422 NK_HLA L2
ENSG00000235162 C12orf75 290334 sc-eQTL 8.40e-01 -0.0135 0.0671 0.422 NK_HLA L2
ENSG00000013503 POLR3B -832124 sc-eQTL 8.64e-01 0.015 0.0873 0.416 NK_cytokine L2
ENSG00000074590 NUAK1 -614409 sc-eQTL 9.33e-01 -0.0068 0.0807 0.416 NK_cytokine L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 7.66e-01 -0.0238 0.0799 0.416 NK_cytokine L2
ENSG00000136044 APPL2 289421 sc-eQTL 2.42e-01 -0.0988 0.0842 0.416 NK_cytokine L2
ENSG00000136051 WASHC4 418300 sc-eQTL 8.75e-01 0.0129 0.0818 0.416 NK_cytokine L2
ENSG00000151131 C12orf45 539308 sc-eQTL 8.19e-02 -0.157 0.0897 0.416 NK_cytokine L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 6.71e-01 -0.0304 0.0714 0.416 NK_cytokine L2
ENSG00000235162 C12orf75 290334 sc-eQTL 4.79e-01 -0.0425 0.0599 0.416 NK_cytokine L2
ENSG00000013503 POLR3B -832124 sc-eQTL 5.81e-01 -0.0623 0.113 0.393 PB L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 6.99e-01 -0.0245 0.0633 0.393 PB L2
ENSG00000136044 APPL2 289421 sc-eQTL 4.19e-01 -0.0926 0.114 0.393 PB L2
ENSG00000136051 WASHC4 418300 sc-eQTL 5.04e-01 -0.0652 0.0973 0.393 PB L2
ENSG00000136052 SLC41A2 566880 sc-eQTL 3.30e-01 0.101 0.103 0.393 PB L2
ENSG00000151131 C12orf45 539308 sc-eQTL 1.05e-01 -0.165 0.101 0.393 PB L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 2.40e-01 -0.124 0.105 0.393 PB L2
ENSG00000235162 C12orf75 290334 sc-eQTL 4.74e-02 0.141 0.0705 0.393 PB L2
ENSG00000013503 POLR3B -832124 sc-eQTL 1.03e-01 -0.147 0.0899 0.411 Pro_T L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 3.88e-01 0.0408 0.0472 0.411 Pro_T L2
ENSG00000136044 APPL2 289421 sc-eQTL 6.81e-01 -0.0353 0.0858 0.411 Pro_T L2
ENSG00000136051 WASHC4 418300 sc-eQTL 3.02e-01 0.0985 0.0951 0.411 Pro_T L2
ENSG00000151131 C12orf45 539308 sc-eQTL 9.30e-01 0.00644 0.0729 0.411 Pro_T L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 2.37e-01 -0.0862 0.0726 0.411 Pro_T L2
ENSG00000235162 C12orf75 290334 sc-eQTL 8.72e-01 -0.00984 0.0609 0.411 Pro_T L2
ENSG00000013503 POLR3B -832124 sc-eQTL 3.92e-01 0.0761 0.0887 0.415 Treg L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 4.94e-01 -0.0449 0.0655 0.415 Treg L2
ENSG00000136044 APPL2 289421 sc-eQTL 7.26e-01 -0.0275 0.0782 0.415 Treg L2
ENSG00000136051 WASHC4 418300 sc-eQTL 6.67e-02 0.159 0.0863 0.415 Treg L2
ENSG00000151131 C12orf45 539308 sc-eQTL 8.28e-01 0.0191 0.0875 0.415 Treg L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 1.92e-01 0.0922 0.0704 0.415 Treg L2
ENSG00000235162 C12orf75 290334 sc-eQTL 6.84e-01 -0.0231 0.0566 0.415 Treg L2
ENSG00000013503 POLR3B -832124 sc-eQTL 2.44e-01 0.103 0.088 0.432 cDC L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 8.96e-01 -0.00861 0.0656 0.432 cDC L2
ENSG00000136044 APPL2 289421 sc-eQTL 9.54e-02 -0.155 0.0925 0.432 cDC L2
ENSG00000136051 WASHC4 418300 sc-eQTL 2.30e-01 -0.0997 0.0828 0.432 cDC L2
ENSG00000136052 SLC41A2 566880 sc-eQTL 1.96e-02 0.168 0.0714 0.432 cDC L2
ENSG00000151131 C12orf45 539308 sc-eQTL 8.40e-01 0.013 0.0644 0.432 cDC L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 8.54e-01 -0.0181 0.0978 0.432 cDC L2
ENSG00000235162 C12orf75 290334 sc-eQTL 8.87e-01 0.00994 0.0698 0.432 cDC L2
ENSG00000013503 POLR3B -832124 sc-eQTL 3.81e-01 0.0761 0.0866 0.415 cMono_IL1B L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 6.06e-01 -0.0307 0.0594 0.415 cMono_IL1B L2
ENSG00000136044 APPL2 289421 sc-eQTL 1.78e-02 -0.211 0.0884 0.415 cMono_IL1B L2
ENSG00000136051 WASHC4 418300 sc-eQTL 6.70e-02 -0.0843 0.0458 0.415 cMono_IL1B L2
ENSG00000151131 C12orf45 539308 sc-eQTL 4.62e-01 -0.0553 0.0751 0.415 cMono_IL1B L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 8.49e-01 0.0135 0.071 0.415 cMono_IL1B L2
ENSG00000235162 C12orf75 290334 sc-eQTL 4.46e-01 0.0636 0.0832 0.415 cMono_IL1B L2
ENSG00000013503 POLR3B -832124 sc-eQTL 5.87e-01 0.0481 0.0884 0.415 cMono_S100A L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 2.00e-01 -0.0827 0.0644 0.415 cMono_S100A L2
ENSG00000136044 APPL2 289421 sc-eQTL 2.09e-01 0.12 0.0954 0.415 cMono_S100A L2
ENSG00000136051 WASHC4 418300 sc-eQTL 6.62e-01 0.0292 0.0667 0.415 cMono_S100A L2
ENSG00000151131 C12orf45 539308 sc-eQTL 9.78e-01 0.00219 0.0797 0.415 cMono_S100A L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 7.28e-01 -0.0264 0.0758 0.415 cMono_S100A L2
ENSG00000235162 C12orf75 290334 sc-eQTL 7.89e-01 0.0219 0.0819 0.415 cMono_S100A L2
ENSG00000013503 POLR3B -832124 sc-eQTL 7.26e-01 0.0354 0.101 0.43 gdT L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 6.73e-02 -0.175 0.095 0.43 gdT L2
ENSG00000136044 APPL2 289421 sc-eQTL 7.59e-01 0.0293 0.0952 0.43 gdT L2
ENSG00000136051 WASHC4 418300 sc-eQTL 6.64e-03 0.301 0.109 0.43 gdT L2
ENSG00000151131 C12orf45 539308 sc-eQTL 9.08e-01 0.0129 0.112 0.43 gdT L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 6.25e-01 0.0511 0.104 0.43 gdT L2
ENSG00000235162 C12orf75 290334 sc-eQTL 1.77e-01 0.119 0.088 0.43 gdT L2
ENSG00000013503 POLR3B -832124 sc-eQTL 8.14e-01 -0.0203 0.0862 0.42 intMono L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 9.10e-02 -0.148 0.0872 0.42 intMono L2
ENSG00000136044 APPL2 289421 sc-eQTL 4.04e-01 -0.0768 0.0918 0.42 intMono L2
ENSG00000136051 WASHC4 418300 sc-eQTL 9.50e-02 -0.129 0.0772 0.42 intMono L2
ENSG00000151131 C12orf45 539308 sc-eQTL 9.15e-01 0.0101 0.0942 0.42 intMono L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 7.74e-01 0.0284 0.0985 0.42 intMono L2
ENSG00000235162 C12orf75 290334 sc-eQTL 9.36e-02 0.136 0.0808 0.42 intMono L2
ENSG00000013503 POLR3B -832124 sc-eQTL 4.34e-02 -0.158 0.0776 0.416 ncMono L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 1.25e-01 -0.124 0.0807 0.416 ncMono L2
ENSG00000136044 APPL2 289421 sc-eQTL 6.31e-01 0.0398 0.0828 0.416 ncMono L2
ENSG00000136051 WASHC4 418300 sc-eQTL 7.53e-01 0.0176 0.0559 0.416 ncMono L2
ENSG00000151131 C12orf45 539308 sc-eQTL 2.33e-01 0.107 0.0893 0.416 ncMono L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 3.82e-01 0.0697 0.0796 0.416 ncMono L2
ENSG00000235162 C12orf75 290334 sc-eQTL 4.03e-01 0.0726 0.0866 0.416 ncMono L2
ENSG00000013503 POLR3B -832124 sc-eQTL 5.10e-01 -0.063 0.0955 0.441 pDC L2
ENSG00000136026 CKAP4 -778655 sc-eQTL 1.20e-01 -0.0952 0.0608 0.441 pDC L2
ENSG00000136044 APPL2 289421 sc-eQTL 2.30e-01 -0.113 0.0938 0.441 pDC L2
ENSG00000136051 WASHC4 418300 sc-eQTL 8.19e-02 -0.155 0.0885 0.441 pDC L2
ENSG00000136052 SLC41A2 566880 sc-eQTL 6.99e-01 -0.027 0.0696 0.441 pDC L2
ENSG00000151131 C12orf45 539308 sc-eQTL 7.20e-01 -0.0218 0.0607 0.441 pDC L2
ENSG00000166046 TCP11L2 -776305 sc-eQTL 8.97e-01 0.012 0.0921 0.441 pDC L2
ENSG00000235162 C12orf75 290334 sc-eQTL 4.35e-01 -0.0457 0.0583 0.441 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -832124 sc-eQTL 8.81e-01 -0.0141 0.0943 0.415 B_Memory LOneK1K
ENSG00000136026 CKAP4 -778655 sc-eQTL 2.46e-03 -0.191 0.0623 0.415 B_Memory LOneK1K
ENSG00000136044 APPL2 289421 sc-eQTL 2.20e-01 0.0984 0.08 0.415 B_Memory LOneK1K
ENSG00000136051 WASHC4 418300 sc-eQTL 6.19e-01 -0.0286 0.0574 0.415 B_Memory LOneK1K
ENSG00000136052 SLC41A2 566880 sc-eQTL 1.10e-01 0.133 0.0828 0.415 B_Memory LOneK1K
ENSG00000151131 C12orf45 539308 sc-eQTL 1.35e-01 0.13 0.0867 0.415 B_Memory LOneK1K
ENSG00000166046 TCP11L2 -776305 sc-eQTL 4.46e-01 0.0588 0.077 0.415 B_Memory LOneK1K
ENSG00000235162 C12orf75 290334 sc-eQTL 2.04e-02 0.182 0.0779 0.415 B_Memory LOneK1K
ENSG00000013503 POLR3B -832124 sc-eQTL 1.57e-01 -0.122 0.086 0.415 B_Naive LOneK1K
ENSG00000136026 CKAP4 -778655 sc-eQTL 9.25e-02 0.108 0.0639 0.415 B_Naive LOneK1K
ENSG00000136044 APPL2 289421 sc-eQTL 9.19e-01 0.00667 0.0659 0.415 B_Naive LOneK1K
ENSG00000136051 WASHC4 418300 sc-eQTL 6.39e-01 0.0264 0.0562 0.415 B_Naive LOneK1K
ENSG00000136052 SLC41A2 566880 sc-eQTL 9.30e-01 0.00604 0.0688 0.415 B_Naive LOneK1K
ENSG00000151131 C12orf45 539308 sc-eQTL 4.45e-01 -0.0717 0.0936 0.415 B_Naive LOneK1K
ENSG00000166046 TCP11L2 -776305 sc-eQTL 8.86e-01 0.00806 0.0562 0.415 B_Naive LOneK1K
ENSG00000235162 C12orf75 290334 sc-eQTL 8.05e-02 0.138 0.0786 0.415 B_Naive LOneK1K
ENSG00000013503 POLR3B -832124 sc-eQTL 1.87e-01 0.108 0.0815 0.415 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 -778655 sc-eQTL 4.15e-01 -0.0464 0.0568 0.415 CD14_Mono LOneK1K
ENSG00000136044 APPL2 289421 sc-eQTL 4.79e-01 -0.0624 0.088 0.415 CD14_Mono LOneK1K
ENSG00000136051 WASHC4 418300 sc-eQTL 4.15e-01 -0.0351 0.043 0.415 CD14_Mono LOneK1K
ENSG00000151131 C12orf45 539308 sc-eQTL 4.23e-01 -0.0564 0.0703 0.415 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 -776305 sc-eQTL 9.79e-01 -0.00156 0.0605 0.415 CD14_Mono LOneK1K
ENSG00000235162 C12orf75 290334 sc-eQTL 5.17e-01 0.0519 0.0799 0.415 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -832124 sc-eQTL 4.08e-02 -0.157 0.0761 0.416 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 -778655 sc-eQTL 2.06e-01 -0.0959 0.0755 0.416 CD16_Mono LOneK1K
ENSG00000136044 APPL2 289421 sc-eQTL 7.91e-01 -0.0227 0.0854 0.416 CD16_Mono LOneK1K
ENSG00000136051 WASHC4 418300 sc-eQTL 6.75e-01 -0.0212 0.0505 0.416 CD16_Mono LOneK1K
ENSG00000151131 C12orf45 539308 sc-eQTL 7.85e-01 0.0251 0.0919 0.416 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 -776305 sc-eQTL 6.55e-01 0.0351 0.0785 0.416 CD16_Mono LOneK1K
ENSG00000235162 C12orf75 290334 sc-eQTL 4.27e-01 0.0714 0.0896 0.416 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -832124 sc-eQTL 2.96e-01 0.0846 0.0807 0.416 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 -614409 sc-eQTL 7.23e-01 0.0276 0.0778 0.416 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 -778655 sc-eQTL 7.90e-01 -0.0198 0.074 0.416 NK_CD56dim LOneK1K
ENSG00000136044 APPL2 289421 sc-eQTL 3.93e-01 -0.0591 0.0691 0.416 NK_CD56dim LOneK1K
ENSG00000136051 WASHC4 418300 sc-eQTL 8.52e-01 0.0142 0.0757 0.416 NK_CD56dim LOneK1K
ENSG00000151131 C12orf45 539308 sc-eQTL 6.65e-01 -0.0395 0.0912 0.416 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 -776305 sc-eQTL 7.69e-01 0.0186 0.0633 0.416 NK_CD56dim LOneK1K
ENSG00000235162 C12orf75 290334 sc-eQTL 7.72e-01 0.0154 0.0529 0.416 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136044 APPL2 289421 pQTL 0.0081 -0.0264 0.00996 0.0 0.0 0.439
ENSG00000136044 APPL2 289421 eQTL 0.00014 -0.0719 0.0188 0.0 0.0 0.453

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina