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Genes within 1Mb (chr12:105482771:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -874977 sc-eQTL 5.40e-01 0.0649 0.106 0.874 B L1
ENSG00000136026 CKAP4 -821508 sc-eQTL 6.91e-02 0.0993 0.0544 0.874 B L1
ENSG00000136044 APPL2 246568 sc-eQTL 4.56e-01 0.0601 0.0805 0.874 B L1
ENSG00000136051 WASHC4 375447 sc-eQTL 6.19e-02 0.0956 0.0509 0.874 B L1
ENSG00000136052 SLC41A2 524027 sc-eQTL 2.91e-01 -0.0863 0.0816 0.874 B L1
ENSG00000151131 C12orf45 496455 sc-eQTL 8.29e-01 0.0214 0.0989 0.874 B L1
ENSG00000166046 TCP11L2 -819158 sc-eQTL 1.49e-01 -0.0948 0.0655 0.874 B L1
ENSG00000235162 C12orf75 247481 sc-eQTL 3.37e-01 -0.0677 0.0703 0.874 B L1
ENSG00000013503 POLR3B -874977 sc-eQTL 4.07e-01 -0.0649 0.0781 0.874 CD4T L1
ENSG00000136026 CKAP4 -821508 sc-eQTL 8.99e-01 -0.00849 0.0668 0.874 CD4T L1
ENSG00000136044 APPL2 246568 sc-eQTL 1.03e-01 0.125 0.0765 0.874 CD4T L1
ENSG00000136051 WASHC4 375447 sc-eQTL 5.15e-01 0.0494 0.0758 0.874 CD4T L1
ENSG00000151131 C12orf45 496455 sc-eQTL 3.64e-01 0.0953 0.105 0.874 CD4T L1
ENSG00000166046 TCP11L2 -819158 sc-eQTL 6.62e-01 0.0297 0.0679 0.874 CD4T L1
ENSG00000235162 C12orf75 247481 sc-eQTL 1.78e-01 -0.0791 0.0585 0.874 CD4T L1
ENSG00000013503 POLR3B -874977 sc-eQTL 8.62e-01 -0.0161 0.0922 0.874 CD8T L1
ENSG00000136026 CKAP4 -821508 sc-eQTL 7.05e-01 -0.0231 0.0609 0.874 CD8T L1
ENSG00000136044 APPL2 246568 sc-eQTL 1.20e-01 0.135 0.0867 0.874 CD8T L1
ENSG00000136051 WASHC4 375447 sc-eQTL 1.89e-01 -0.128 0.097 0.874 CD8T L1
ENSG00000151131 C12orf45 496455 sc-eQTL 2.29e-02 0.2 0.087 0.874 CD8T L1
ENSG00000166046 TCP11L2 -819158 sc-eQTL 1.78e-01 0.0727 0.0538 0.874 CD8T L1
ENSG00000235162 C12orf75 247481 sc-eQTL 1.76e-01 -0.0523 0.0386 0.874 CD8T L1
ENSG00000013503 POLR3B -874977 sc-eQTL 6.65e-01 -0.0458 0.106 0.869 DC L1
ENSG00000136026 CKAP4 -821508 sc-eQTL 1.96e-01 0.0942 0.0725 0.869 DC L1
ENSG00000136044 APPL2 246568 sc-eQTL 4.54e-01 0.0815 0.109 0.869 DC L1
ENSG00000136051 WASHC4 375447 sc-eQTL 4.81e-01 0.0619 0.0876 0.869 DC L1
ENSG00000136052 SLC41A2 524027 sc-eQTL 2.42e-01 -0.0871 0.0741 0.869 DC L1
ENSG00000151131 C12orf45 496455 sc-eQTL 8.14e-01 -0.0157 0.0665 0.869 DC L1
ENSG00000166046 TCP11L2 -819158 sc-eQTL 7.67e-01 0.0325 0.109 0.869 DC L1
ENSG00000235162 C12orf75 247481 sc-eQTL 8.47e-01 -0.00861 0.0446 0.869 DC L1
ENSG00000013503 POLR3B -874977 sc-eQTL 1.61e-01 0.13 0.0924 0.874 Mono L1
ENSG00000136026 CKAP4 -821508 sc-eQTL 9.76e-01 -0.00196 0.0666 0.874 Mono L1
ENSG00000136044 APPL2 246568 sc-eQTL 5.91e-01 -0.0567 0.105 0.874 Mono L1
ENSG00000136051 WASHC4 375447 sc-eQTL 5.93e-03 0.141 0.0509 0.874 Mono L1
ENSG00000151131 C12orf45 496455 sc-eQTL 4.67e-01 0.0662 0.0908 0.874 Mono L1
ENSG00000166046 TCP11L2 -819158 sc-eQTL 7.66e-01 -0.023 0.0773 0.874 Mono L1
ENSG00000235162 C12orf75 247481 sc-eQTL 4.63e-01 -0.074 0.101 0.874 Mono L1
ENSG00000013503 POLR3B -874977 sc-eQTL 1.30e-01 -0.153 0.1 0.873 NK L1
ENSG00000074590 NUAK1 -657262 sc-eQTL 6.60e-01 0.0437 0.0994 0.873 NK L1
ENSG00000136026 CKAP4 -821508 sc-eQTL 5.10e-01 -0.0595 0.0903 0.873 NK L1
ENSG00000136044 APPL2 246568 sc-eQTL 7.24e-02 0.16 0.0885 0.873 NK L1
ENSG00000136051 WASHC4 375447 sc-eQTL 1.66e-01 -0.129 0.0926 0.873 NK L1
ENSG00000151131 C12orf45 496455 sc-eQTL 2.60e-02 0.253 0.113 0.873 NK L1
ENSG00000166046 TCP11L2 -819158 sc-eQTL 7.68e-01 -0.0243 0.0823 0.873 NK L1
ENSG00000235162 C12orf75 247481 sc-eQTL 4.20e-01 -0.0544 0.0673 0.873 NK L1
ENSG00000013503 POLR3B -874977 sc-eQTL 1.67e-01 0.158 0.114 0.874 Other_T L1
ENSG00000136026 CKAP4 -821508 sc-eQTL 8.96e-01 0.00937 0.0716 0.874 Other_T L1
ENSG00000136044 APPL2 246568 sc-eQTL 5.19e-01 0.0603 0.0933 0.874 Other_T L1
ENSG00000136051 WASHC4 375447 sc-eQTL 8.73e-01 0.0197 0.123 0.874 Other_T L1
ENSG00000151131 C12orf45 496455 sc-eQTL 3.68e-01 0.0777 0.0861 0.874 Other_T L1
ENSG00000166046 TCP11L2 -819158 sc-eQTL 7.04e-01 -0.0335 0.0878 0.874 Other_T L1
ENSG00000235162 C12orf75 247481 sc-eQTL 8.49e-01 -0.0137 0.0718 0.874 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -874977 sc-eQTL 3.62e-01 0.11 0.12 0.878 B_Activated L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 8.39e-01 -0.0232 0.114 0.878 B_Activated L2
ENSG00000136044 APPL2 246568 sc-eQTL 8.50e-01 -0.0244 0.129 0.878 B_Activated L2
ENSG00000136051 WASHC4 375447 sc-eQTL 8.55e-02 0.21 0.121 0.878 B_Activated L2
ENSG00000136052 SLC41A2 524027 sc-eQTL 2.95e-01 0.0958 0.0912 0.878 B_Activated L2
ENSG00000151131 C12orf45 496455 sc-eQTL 9.11e-01 -0.0142 0.127 0.878 B_Activated L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 1.04e-02 -0.323 0.125 0.878 B_Activated L2
ENSG00000235162 C12orf75 247481 sc-eQTL 1.71e-01 -0.169 0.123 0.878 B_Activated L2
ENSG00000013503 POLR3B -874977 sc-eQTL 1.45e-01 0.176 0.12 0.876 B_Intermediate L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 1.32e-03 0.284 0.0874 0.876 B_Intermediate L2
ENSG00000136044 APPL2 246568 sc-eQTL 9.18e-01 0.011 0.107 0.876 B_Intermediate L2
ENSG00000136051 WASHC4 375447 sc-eQTL 4.86e-01 0.0643 0.092 0.876 B_Intermediate L2
ENSG00000136052 SLC41A2 524027 sc-eQTL 5.83e-02 -0.191 0.1 0.876 B_Intermediate L2
ENSG00000151131 C12orf45 496455 sc-eQTL 4.28e-01 -0.0927 0.117 0.876 B_Intermediate L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 3.28e-02 -0.221 0.103 0.876 B_Intermediate L2
ENSG00000235162 C12orf75 247481 sc-eQTL 7.37e-01 -0.0365 0.109 0.876 B_Intermediate L2
ENSG00000013503 POLR3B -874977 sc-eQTL 7.47e-01 0.0388 0.12 0.873 B_Memory L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 3.97e-01 0.0859 0.101 0.873 B_Memory L2
ENSG00000136044 APPL2 246568 sc-eQTL 5.74e-01 -0.0616 0.109 0.873 B_Memory L2
ENSG00000136051 WASHC4 375447 sc-eQTL 2.23e-01 0.11 0.0902 0.873 B_Memory L2
ENSG00000136052 SLC41A2 524027 sc-eQTL 2.21e-01 -0.13 0.106 0.873 B_Memory L2
ENSG00000151131 C12orf45 496455 sc-eQTL 7.20e-01 0.044 0.123 0.873 B_Memory L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 9.54e-01 -0.00588 0.101 0.873 B_Memory L2
ENSG00000235162 C12orf75 247481 sc-eQTL 1.56e-01 0.132 0.0925 0.873 B_Memory L2
ENSG00000013503 POLR3B -874977 sc-eQTL 9.81e-01 -0.00265 0.11 0.874 B_Naive1 L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 5.33e-01 -0.0518 0.0829 0.874 B_Naive1 L2
ENSG00000136044 APPL2 246568 sc-eQTL 4.15e-01 -0.0758 0.0928 0.874 B_Naive1 L2
ENSG00000136051 WASHC4 375447 sc-eQTL 7.88e-01 0.0225 0.0835 0.874 B_Naive1 L2
ENSG00000136052 SLC41A2 524027 sc-eQTL 7.45e-01 -0.0315 0.0966 0.874 B_Naive1 L2
ENSG00000151131 C12orf45 496455 sc-eQTL 8.00e-01 0.0305 0.12 0.874 B_Naive1 L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 7.59e-02 -0.144 0.0809 0.874 B_Naive1 L2
ENSG00000235162 C12orf75 247481 sc-eQTL 4.57e-01 -0.0795 0.107 0.874 B_Naive1 L2
ENSG00000013503 POLR3B -874977 sc-eQTL 8.31e-01 0.0254 0.119 0.873 B_Naive2 L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 2.05e-01 -0.131 0.103 0.873 B_Naive2 L2
ENSG00000136044 APPL2 246568 sc-eQTL 2.12e-01 0.123 0.0985 0.873 B_Naive2 L2
ENSG00000136051 WASHC4 375447 sc-eQTL 2.85e-01 0.0956 0.0891 0.873 B_Naive2 L2
ENSG00000136052 SLC41A2 524027 sc-eQTL 1.79e-01 0.126 0.0934 0.873 B_Naive2 L2
ENSG00000151131 C12orf45 496455 sc-eQTL 6.35e-02 0.235 0.126 0.873 B_Naive2 L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 6.88e-01 -0.0354 0.0881 0.873 B_Naive2 L2
ENSG00000235162 C12orf75 247481 sc-eQTL 3.47e-01 -0.103 0.109 0.873 B_Naive2 L2
ENSG00000013503 POLR3B -874977 sc-eQTL 7.79e-01 -0.0324 0.115 0.875 CD4_CTL L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 3.98e-01 -0.0802 0.0947 0.875 CD4_CTL L2
ENSG00000136044 APPL2 246568 sc-eQTL 8.60e-01 0.0208 0.118 0.875 CD4_CTL L2
ENSG00000136051 WASHC4 375447 sc-eQTL 2.39e-01 -0.133 0.113 0.875 CD4_CTL L2
ENSG00000151131 C12orf45 496455 sc-eQTL 8.45e-02 -0.196 0.113 0.875 CD4_CTL L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 3.42e-01 -0.114 0.12 0.875 CD4_CTL L2
ENSG00000235162 C12orf75 247481 sc-eQTL 1.17e-01 -0.107 0.0683 0.875 CD4_CTL L2
ENSG00000013503 POLR3B -874977 sc-eQTL 4.21e-01 -0.0704 0.0873 0.874 CD4_Naive L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 6.87e-01 0.0303 0.0751 0.874 CD4_Naive L2
ENSG00000136044 APPL2 246568 sc-eQTL 3.69e-02 0.166 0.0792 0.874 CD4_Naive L2
ENSG00000136051 WASHC4 375447 sc-eQTL 6.80e-01 0.0326 0.0789 0.874 CD4_Naive L2
ENSG00000151131 C12orf45 496455 sc-eQTL 5.69e-01 0.0657 0.115 0.874 CD4_Naive L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 1.35e-01 0.112 0.0748 0.874 CD4_Naive L2
ENSG00000235162 C12orf75 247481 sc-eQTL 9.69e-01 -0.00402 0.103 0.874 CD4_Naive L2
ENSG00000013503 POLR3B -874977 sc-eQTL 9.12e-01 0.011 0.0996 0.874 CD4_TCM L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 4.56e-01 -0.0546 0.0731 0.874 CD4_TCM L2
ENSG00000136044 APPL2 246568 sc-eQTL 1.25e-01 0.146 0.0947 0.874 CD4_TCM L2
ENSG00000136051 WASHC4 375447 sc-eQTL 9.14e-01 0.0107 0.0981 0.874 CD4_TCM L2
ENSG00000151131 C12orf45 496455 sc-eQTL 3.49e-01 0.113 0.121 0.874 CD4_TCM L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 7.62e-01 -0.0245 0.0806 0.874 CD4_TCM L2
ENSG00000235162 C12orf75 247481 sc-eQTL 1.48e-01 -0.115 0.0794 0.874 CD4_TCM L2
ENSG00000013503 POLR3B -874977 sc-eQTL 5.89e-02 -0.231 0.122 0.874 CD4_TEM L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 5.39e-01 -0.0592 0.0962 0.874 CD4_TEM L2
ENSG00000136044 APPL2 246568 sc-eQTL 8.79e-01 0.016 0.105 0.874 CD4_TEM L2
ENSG00000136051 WASHC4 375447 sc-eQTL 2.21e-01 0.146 0.119 0.874 CD4_TEM L2
ENSG00000151131 C12orf45 496455 sc-eQTL 2.69e-01 -0.128 0.115 0.874 CD4_TEM L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 5.59e-01 -0.0563 0.0963 0.874 CD4_TEM L2
ENSG00000235162 C12orf75 247481 sc-eQTL 9.47e-01 -0.00515 0.0773 0.874 CD4_TEM L2
ENSG00000013503 POLR3B -874977 sc-eQTL 4.42e-01 0.0857 0.111 0.874 CD8_CTL L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 9.00e-01 -0.0124 0.0992 0.874 CD8_CTL L2
ENSG00000136044 APPL2 246568 sc-eQTL 7.87e-02 0.164 0.093 0.874 CD8_CTL L2
ENSG00000136051 WASHC4 375447 sc-eQTL 9.73e-01 0.00356 0.104 0.874 CD8_CTL L2
ENSG00000151131 C12orf45 496455 sc-eQTL 1.35e-01 0.183 0.122 0.874 CD8_CTL L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 5.07e-01 0.0706 0.106 0.874 CD8_CTL L2
ENSG00000235162 C12orf75 247481 sc-eQTL 2.36e-01 -0.0931 0.0783 0.874 CD8_CTL L2
ENSG00000013503 POLR3B -874977 sc-eQTL 8.19e-01 0.0237 0.103 0.874 CD8_Naive L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 6.73e-01 -0.0388 0.0919 0.874 CD8_Naive L2
ENSG00000136044 APPL2 246568 sc-eQTL 8.45e-01 0.0185 0.0945 0.874 CD8_Naive L2
ENSG00000136051 WASHC4 375447 sc-eQTL 4.25e-01 -0.0818 0.102 0.874 CD8_Naive L2
ENSG00000151131 C12orf45 496455 sc-eQTL 1.32e-01 0.165 0.11 0.874 CD8_Naive L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 6.08e-01 0.0421 0.0821 0.874 CD8_Naive L2
ENSG00000235162 C12orf75 247481 sc-eQTL 8.75e-01 -0.0138 0.0879 0.874 CD8_Naive L2
ENSG00000013503 POLR3B -874977 sc-eQTL 8.11e-01 -0.0292 0.122 0.877 CD8_TCM L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 9.46e-01 -0.00721 0.106 0.877 CD8_TCM L2
ENSG00000136044 APPL2 246568 sc-eQTL 8.09e-01 0.0288 0.119 0.877 CD8_TCM L2
ENSG00000136051 WASHC4 375447 sc-eQTL 5.58e-01 -0.0705 0.12 0.877 CD8_TCM L2
ENSG00000151131 C12orf45 496455 sc-eQTL 7.64e-01 0.0385 0.128 0.877 CD8_TCM L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 4.38e-01 0.0793 0.102 0.877 CD8_TCM L2
ENSG00000235162 C12orf75 247481 sc-eQTL 8.72e-01 0.0183 0.113 0.877 CD8_TCM L2
ENSG00000013503 POLR3B -874977 sc-eQTL 9.72e-01 0.00431 0.123 0.877 CD8_TEM L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 7.29e-01 -0.0392 0.113 0.877 CD8_TEM L2
ENSG00000136044 APPL2 246568 sc-eQTL 6.68e-01 -0.0535 0.124 0.877 CD8_TEM L2
ENSG00000136051 WASHC4 375447 sc-eQTL 4.49e-01 -0.0975 0.129 0.877 CD8_TEM L2
ENSG00000151131 C12orf45 496455 sc-eQTL 3.06e-01 0.129 0.125 0.877 CD8_TEM L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 2.59e-01 -0.133 0.117 0.877 CD8_TEM L2
ENSG00000235162 C12orf75 247481 sc-eQTL 3.03e-03 -0.281 0.0938 0.877 CD8_TEM L2
ENSG00000013503 POLR3B -874977 sc-eQTL 5.63e-02 0.219 0.114 0.874 MAIT L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 7.12e-01 -0.0381 0.103 0.874 MAIT L2
ENSG00000136044 APPL2 246568 sc-eQTL 1.86e-01 0.146 0.11 0.874 MAIT L2
ENSG00000136051 WASHC4 375447 sc-eQTL 2.30e-01 0.156 0.129 0.874 MAIT L2
ENSG00000151131 C12orf45 496455 sc-eQTL 2.79e-01 0.126 0.116 0.874 MAIT L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 8.90e-01 -0.0145 0.105 0.874 MAIT L2
ENSG00000235162 C12orf75 247481 sc-eQTL 7.45e-01 -0.0284 0.0873 0.874 MAIT L2
ENSG00000013503 POLR3B -874977 sc-eQTL 5.70e-01 0.0643 0.113 0.876 NK_CD56bright L2
ENSG00000074590 NUAK1 -657262 sc-eQTL 2.09e-01 -0.124 0.0983 0.876 NK_CD56bright L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 3.82e-01 -0.081 0.0924 0.876 NK_CD56bright L2
ENSG00000136044 APPL2 246568 sc-eQTL 5.78e-01 0.0614 0.11 0.876 NK_CD56bright L2
ENSG00000136051 WASHC4 375447 sc-eQTL 2.11e-01 -0.142 0.113 0.876 NK_CD56bright L2
ENSG00000151131 C12orf45 496455 sc-eQTL 9.27e-01 0.0113 0.123 0.876 NK_CD56bright L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 8.64e-01 0.0202 0.118 0.876 NK_CD56bright L2
ENSG00000235162 C12orf75 247481 sc-eQTL 2.31e-01 0.128 0.106 0.876 NK_CD56bright L2
ENSG00000013503 POLR3B -874977 sc-eQTL 1.83e-01 -0.137 0.102 0.873 NK_CD56dim L2
ENSG00000074590 NUAK1 -657262 sc-eQTL 9.52e-01 0.00605 0.1 0.873 NK_CD56dim L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 6.72e-01 0.0437 0.103 0.873 NK_CD56dim L2
ENSG00000136044 APPL2 246568 sc-eQTL 1.28e-02 0.229 0.0913 0.873 NK_CD56dim L2
ENSG00000136051 WASHC4 375447 sc-eQTL 3.81e-01 -0.0888 0.101 0.873 NK_CD56dim L2
ENSG00000151131 C12orf45 496455 sc-eQTL 1.43e-01 0.178 0.121 0.873 NK_CD56dim L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 3.56e-01 -0.0836 0.0903 0.873 NK_CD56dim L2
ENSG00000235162 C12orf75 247481 sc-eQTL 1.66e-01 -0.101 0.073 0.873 NK_CD56dim L2
ENSG00000013503 POLR3B -874977 sc-eQTL 3.65e-01 -0.108 0.118 0.87 NK_HLA L2
ENSG00000074590 NUAK1 -657262 sc-eQTL 2.22e-02 0.263 0.114 0.87 NK_HLA L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 4.67e-01 -0.0779 0.107 0.87 NK_HLA L2
ENSG00000136044 APPL2 246568 sc-eQTL 3.06e-01 -0.12 0.117 0.87 NK_HLA L2
ENSG00000136051 WASHC4 375447 sc-eQTL 8.87e-02 -0.207 0.121 0.87 NK_HLA L2
ENSG00000151131 C12orf45 496455 sc-eQTL 9.03e-01 0.015 0.123 0.87 NK_HLA L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 4.53e-01 0.0903 0.12 0.87 NK_HLA L2
ENSG00000235162 C12orf75 247481 sc-eQTL 1.99e-01 -0.113 0.0878 0.87 NK_HLA L2
ENSG00000013503 POLR3B -874977 sc-eQTL 6.78e-01 -0.049 0.118 0.873 NK_cytokine L2
ENSG00000074590 NUAK1 -657262 sc-eQTL 3.91e-01 0.0935 0.109 0.873 NK_cytokine L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 4.38e-01 -0.0837 0.108 0.873 NK_cytokine L2
ENSG00000136044 APPL2 246568 sc-eQTL 8.68e-01 0.019 0.114 0.873 NK_cytokine L2
ENSG00000136051 WASHC4 375447 sc-eQTL 8.69e-01 0.0182 0.11 0.873 NK_cytokine L2
ENSG00000151131 C12orf45 496455 sc-eQTL 2.36e-01 0.145 0.122 0.873 NK_cytokine L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 9.60e-01 -0.00487 0.0965 0.873 NK_cytokine L2
ENSG00000235162 C12orf75 247481 sc-eQTL 5.27e-01 -0.0514 0.081 0.873 NK_cytokine L2
ENSG00000013503 POLR3B -874977 sc-eQTL 5.27e-01 0.092 0.145 0.878 PB L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 4.34e-01 0.0638 0.0813 0.878 PB L2
ENSG00000136044 APPL2 246568 sc-eQTL 2.59e-01 -0.166 0.146 0.878 PB L2
ENSG00000136051 WASHC4 375447 sc-eQTL 7.15e-01 -0.0459 0.125 0.878 PB L2
ENSG00000136052 SLC41A2 524027 sc-eQTL 4.16e-01 0.109 0.133 0.878 PB L2
ENSG00000151131 C12orf45 496455 sc-eQTL 2.26e-01 0.16 0.131 0.878 PB L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 3.17e-01 0.136 0.136 0.878 PB L2
ENSG00000235162 C12orf75 247481 sc-eQTL 7.96e-01 0.024 0.0924 0.878 PB L2
ENSG00000013503 POLR3B -874977 sc-eQTL 1.15e-01 -0.183 0.116 0.874 Pro_T L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 7.70e-01 0.0178 0.0607 0.874 Pro_T L2
ENSG00000136044 APPL2 246568 sc-eQTL 5.93e-01 -0.059 0.11 0.874 Pro_T L2
ENSG00000136051 WASHC4 375447 sc-eQTL 2.89e-01 -0.13 0.122 0.874 Pro_T L2
ENSG00000151131 C12orf45 496455 sc-eQTL 8.30e-01 -0.0201 0.0937 0.874 Pro_T L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 4.19e-01 0.0758 0.0935 0.874 Pro_T L2
ENSG00000235162 C12orf75 247481 sc-eQTL 5.14e-02 0.152 0.0776 0.874 Pro_T L2
ENSG00000013503 POLR3B -874977 sc-eQTL 4.51e-01 0.0888 0.118 0.874 Treg L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 7.77e-01 0.0247 0.087 0.874 Treg L2
ENSG00000136044 APPL2 246568 sc-eQTL 8.61e-01 -0.0182 0.104 0.874 Treg L2
ENSG00000136051 WASHC4 375447 sc-eQTL 1.90e-01 0.151 0.115 0.874 Treg L2
ENSG00000151131 C12orf45 496455 sc-eQTL 3.66e-01 0.105 0.116 0.874 Treg L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 2.66e-01 0.104 0.0936 0.874 Treg L2
ENSG00000235162 C12orf75 247481 sc-eQTL 1.49e-01 -0.108 0.0747 0.874 Treg L2
ENSG00000013503 POLR3B -874977 sc-eQTL 1.84e-01 0.148 0.111 0.868 cDC L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 5.67e-01 0.0475 0.0828 0.868 cDC L2
ENSG00000136044 APPL2 246568 sc-eQTL 4.69e-01 0.0854 0.118 0.868 cDC L2
ENSG00000136051 WASHC4 375447 sc-eQTL 7.73e-01 0.0303 0.105 0.868 cDC L2
ENSG00000136052 SLC41A2 524027 sc-eQTL 1.94e-01 -0.119 0.0912 0.868 cDC L2
ENSG00000151131 C12orf45 496455 sc-eQTL 4.04e-01 0.068 0.0813 0.868 cDC L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 6.52e-02 0.227 0.122 0.868 cDC L2
ENSG00000235162 C12orf75 247481 sc-eQTL 2.71e-01 -0.097 0.0879 0.868 cDC L2
ENSG00000013503 POLR3B -874977 sc-eQTL 3.32e-01 0.107 0.11 0.874 cMono_IL1B L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 6.78e-01 -0.0314 0.0756 0.874 cMono_IL1B L2
ENSG00000136044 APPL2 246568 sc-eQTL 6.47e-01 0.0522 0.114 0.874 cMono_IL1B L2
ENSG00000136051 WASHC4 375447 sc-eQTL 2.52e-02 0.131 0.058 0.874 cMono_IL1B L2
ENSG00000151131 C12orf45 496455 sc-eQTL 7.92e-01 0.0252 0.0957 0.874 cMono_IL1B L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 9.27e-01 0.00824 0.0903 0.874 cMono_IL1B L2
ENSG00000235162 C12orf75 247481 sc-eQTL 5.67e-02 -0.202 0.105 0.874 cMono_IL1B L2
ENSG00000013503 POLR3B -874977 sc-eQTL 1.78e-01 0.153 0.113 0.874 cMono_S100A L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 4.71e-01 0.0599 0.0829 0.874 cMono_S100A L2
ENSG00000136044 APPL2 246568 sc-eQTL 7.05e-02 -0.222 0.122 0.874 cMono_S100A L2
ENSG00000136051 WASHC4 375447 sc-eQTL 9.95e-01 0.000564 0.0857 0.874 cMono_S100A L2
ENSG00000151131 C12orf45 496455 sc-eQTL 6.33e-01 0.0489 0.102 0.874 cMono_S100A L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 4.39e-01 0.0754 0.0972 0.874 cMono_S100A L2
ENSG00000235162 C12orf75 247481 sc-eQTL 6.29e-01 -0.0508 0.105 0.874 cMono_S100A L2
ENSG00000013503 POLR3B -874977 sc-eQTL 6.42e-01 -0.0604 0.13 0.873 gdT L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 5.49e-02 0.236 0.122 0.873 gdT L2
ENSG00000136044 APPL2 246568 sc-eQTL 3.63e-01 0.112 0.122 0.873 gdT L2
ENSG00000136051 WASHC4 375447 sc-eQTL 3.69e-01 -0.13 0.144 0.873 gdT L2
ENSG00000151131 C12orf45 496455 sc-eQTL 9.04e-01 0.0174 0.144 0.873 gdT L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 2.45e-01 -0.156 0.134 0.873 gdT L2
ENSG00000235162 C12orf75 247481 sc-eQTL 4.80e-02 -0.224 0.112 0.873 gdT L2
ENSG00000013503 POLR3B -874977 sc-eQTL 8.19e-01 -0.0254 0.111 0.876 intMono L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 5.91e-02 -0.213 0.112 0.876 intMono L2
ENSG00000136044 APPL2 246568 sc-eQTL 3.74e-01 0.105 0.118 0.876 intMono L2
ENSG00000136051 WASHC4 375447 sc-eQTL 1.44e-01 0.146 0.0995 0.876 intMono L2
ENSG00000151131 C12orf45 496455 sc-eQTL 4.03e-01 0.101 0.121 0.876 intMono L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 1.52e-01 -0.181 0.126 0.876 intMono L2
ENSG00000235162 C12orf75 247481 sc-eQTL 3.87e-01 -0.0907 0.105 0.876 intMono L2
ENSG00000013503 POLR3B -874977 sc-eQTL 1.16e-01 0.162 0.103 0.869 ncMono L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 3.08e-01 0.109 0.106 0.869 ncMono L2
ENSG00000136044 APPL2 246568 sc-eQTL 1.98e-01 -0.14 0.109 0.869 ncMono L2
ENSG00000136051 WASHC4 375447 sc-eQTL 3.33e-02 0.156 0.0727 0.869 ncMono L2
ENSG00000151131 C12orf45 496455 sc-eQTL 7.92e-01 -0.0311 0.118 0.869 ncMono L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 2.50e-03 -0.314 0.103 0.869 ncMono L2
ENSG00000235162 C12orf75 247481 sc-eQTL 6.37e-01 0.0539 0.114 0.869 ncMono L2
ENSG00000013503 POLR3B -874977 sc-eQTL 3.33e-01 -0.122 0.125 0.873 pDC L2
ENSG00000136026 CKAP4 -821508 sc-eQTL 9.45e-01 0.00556 0.0806 0.873 pDC L2
ENSG00000136044 APPL2 246568 sc-eQTL 6.99e-01 -0.0479 0.124 0.873 pDC L2
ENSG00000136051 WASHC4 375447 sc-eQTL 4.25e-01 0.0937 0.117 0.873 pDC L2
ENSG00000136052 SLC41A2 524027 sc-eQTL 2.98e-01 -0.0953 0.0912 0.873 pDC L2
ENSG00000151131 C12orf45 496455 sc-eQTL 8.97e-01 -0.0103 0.0798 0.873 pDC L2
ENSG00000166046 TCP11L2 -819158 sc-eQTL 6.79e-01 0.0501 0.121 0.873 pDC L2
ENSG00000235162 C12orf75 247481 sc-eQTL 9.33e-01 0.0065 0.0768 0.873 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000013503 POLR3B -874977 sc-eQTL 1.17e-01 0.186 0.118 0.874 B_Memory LOneK1K
ENSG00000136026 CKAP4 -821508 sc-eQTL 8.10e-03 0.211 0.079 0.874 B_Memory LOneK1K
ENSG00000136044 APPL2 246568 sc-eQTL 6.36e-01 0.0481 0.101 0.874 B_Memory LOneK1K
ENSG00000136051 WASHC4 375447 sc-eQTL 9.24e-02 0.122 0.0719 0.874 B_Memory LOneK1K
ENSG00000136052 SLC41A2 524027 sc-eQTL 6.18e-02 -0.196 0.104 0.874 B_Memory LOneK1K
ENSG00000151131 C12orf45 496455 sc-eQTL 4.17e-01 -0.0893 0.11 0.874 B_Memory LOneK1K
ENSG00000166046 TCP11L2 -819158 sc-eQTL 4.94e-02 -0.191 0.0964 0.874 B_Memory LOneK1K
ENSG00000235162 C12orf75 247481 sc-eQTL 9.61e-01 0.00485 0.0996 0.874 B_Memory LOneK1K
ENSG00000013503 POLR3B -874977 sc-eQTL 8.93e-01 0.0152 0.112 0.874 B_Naive LOneK1K
ENSG00000136026 CKAP4 -821508 sc-eQTL 5.82e-01 -0.046 0.0834 0.874 B_Naive LOneK1K
ENSG00000136044 APPL2 246568 sc-eQTL 9.33e-01 0.00724 0.0855 0.874 B_Naive LOneK1K
ENSG00000136051 WASHC4 375447 sc-eQTL 3.58e-01 0.067 0.0728 0.874 B_Naive LOneK1K
ENSG00000136052 SLC41A2 524027 sc-eQTL 9.43e-01 0.00639 0.0893 0.874 B_Naive LOneK1K
ENSG00000151131 C12orf45 496455 sc-eQTL 5.81e-01 0.0672 0.121 0.874 B_Naive LOneK1K
ENSG00000166046 TCP11L2 -819158 sc-eQTL 4.69e-02 -0.144 0.0722 0.874 B_Naive LOneK1K
ENSG00000235162 C12orf75 247481 sc-eQTL 5.57e-01 -0.0603 0.103 0.874 B_Naive LOneK1K
ENSG00000013503 POLR3B -874977 sc-eQTL 1.91e-01 0.137 0.104 0.874 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 -821508 sc-eQTL 9.33e-01 0.00614 0.0728 0.874 CD14_Mono LOneK1K
ENSG00000136044 APPL2 246568 sc-eQTL 3.21e-01 -0.112 0.112 0.874 CD14_Mono LOneK1K
ENSG00000136051 WASHC4 375447 sc-eQTL 1.40e-01 0.0813 0.0548 0.874 CD14_Mono LOneK1K
ENSG00000151131 C12orf45 496455 sc-eQTL 5.83e-01 0.0494 0.0899 0.874 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 -819158 sc-eQTL 5.78e-01 0.0431 0.0774 0.874 CD14_Mono LOneK1K
ENSG00000235162 C12orf75 247481 sc-eQTL 1.04e-01 -0.166 0.102 0.874 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -874977 sc-eQTL 1.94e-01 0.128 0.0982 0.873 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 -821508 sc-eQTL 6.01e-01 -0.0509 0.0972 0.873 CD16_Mono LOneK1K
ENSG00000136044 APPL2 246568 sc-eQTL 6.25e-01 0.0537 0.11 0.873 CD16_Mono LOneK1K
ENSG00000136051 WASHC4 375447 sc-eQTL 3.08e-03 0.19 0.0635 0.873 CD16_Mono LOneK1K
ENSG00000151131 C12orf45 496455 sc-eQTL 2.96e-01 0.123 0.118 0.873 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 -819158 sc-eQTL 1.21e-02 -0.251 0.0993 0.873 CD16_Mono LOneK1K
ENSG00000235162 C12orf75 247481 sc-eQTL 8.21e-01 0.0261 0.115 0.873 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -874977 sc-eQTL 1.22e-01 -0.16 0.103 0.873 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 -657262 sc-eQTL 4.07e-01 0.083 0.0999 0.873 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 -821508 sc-eQTL 8.40e-01 -0.0192 0.0952 0.873 NK_CD56dim LOneK1K
ENSG00000136044 APPL2 246568 sc-eQTL 6.89e-02 0.161 0.0883 0.873 NK_CD56dim LOneK1K
ENSG00000136051 WASHC4 375447 sc-eQTL 2.01e-01 -0.124 0.097 0.873 NK_CD56dim LOneK1K
ENSG00000151131 C12orf45 496455 sc-eQTL 3.80e-02 0.242 0.116 0.873 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 -819158 sc-eQTL 5.95e-01 -0.0433 0.0813 0.873 NK_CD56dim LOneK1K
ENSG00000235162 C12orf75 247481 sc-eQTL 3.12e-01 -0.0689 0.0679 0.873 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136026 CKAP4 -821508 eQTL 0.0111 -0.0378 0.0148 0.0013 0.0 0.141
ENSG00000136044 APPL2 246568 pQTL 0.0289 0.0309 0.0141 0.0 0.0 0.141
ENSG00000136044 APPL2 246568 eQTL 2.39e-06 0.129 0.0272 0.0 0.0 0.141

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000136044 APPL2 246568 1.28e-06 1.29e-06 2.54e-07 1.13e-06 3.48e-07 6.09e-07 1.41e-06 3.49e-07 1.49e-06 5.9e-07 2.03e-06 8.32e-07 2.53e-06 2.98e-07 5.42e-07 9.19e-07 9.41e-07 7.89e-07 6.6e-07 6.46e-07 7.49e-07 1.93e-06 1.14e-06 6.57e-07 2.41e-06 6.16e-07 9.28e-07 9.43e-07 1.63e-06 1.38e-06 6.73e-07 5.06e-08 1.88e-07 6.86e-07 5.28e-07 4.41e-07 4.49e-07 2.4e-07 4.97e-07 2.44e-07 2.79e-07 2.2e-06 6.13e-08 2.07e-07 1.86e-07 2.14e-07 2.56e-07 8.67e-08 1.08e-07