logo

Genes within 1Mb (chr12:105308229:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000136026 CKAP4 -996050 sc-eQTL 1.27e-01 -0.279 0.182 0.05 CD8_TEM L2
ENSG00000136044 APPL2 72026 sc-eQTL 6.59e-01 0.089 0.202 0.05 CD8_TEM L2
ENSG00000136051 WASHC4 200905 sc-eQTL 4.10e-02 0.425 0.206 0.05 CD8_TEM L2
ENSG00000151131 C12orf45 321913 sc-eQTL 7.43e-01 0.0667 0.203 0.05 CD8_TEM L2
ENSG00000166046 TCP11L2 -993700 sc-eQTL 1.29e-03 0.607 0.186 0.05 CD8_TEM L2
ENSG00000171310 CHST11 852934 sc-eQTL 9.04e-01 -0.0239 0.198 0.05 CD8_TEM L2
ENSG00000235162 C12orf75 72939 sc-eQTL 2.84e-01 0.166 0.155 0.05 CD8_TEM L2
ENSG00000074590 NUAK1 -831804 sc-eQTL 7.11e-01 0.06 0.162 0.051 NK_CD56bright L2
ENSG00000136026 CKAP4 -996050 sc-eQTL 8.78e-01 0.0233 0.152 0.051 NK_CD56bright L2
ENSG00000136044 APPL2 72026 sc-eQTL 4.22e-03 -0.513 0.177 0.051 NK_CD56bright L2
ENSG00000136051 WASHC4 200905 sc-eQTL 6.73e-01 -0.0789 0.187 0.051 NK_CD56bright L2
ENSG00000151131 C12orf45 321913 sc-eQTL 1.73e-01 -0.275 0.201 0.051 NK_CD56bright L2
ENSG00000166046 TCP11L2 -993700 sc-eQTL 9.38e-01 -0.0152 0.194 0.051 NK_CD56bright L2
ENSG00000171310 CHST11 852934 sc-eQTL 2.67e-01 -0.184 0.166 0.051 NK_CD56bright L2
ENSG00000235162 C12orf75 72939 sc-eQTL 9.45e-02 -0.292 0.174 0.051 NK_CD56bright L2
ENSG00000074590 NUAK1 -831804 sc-eQTL 2.08e-01 -0.236 0.186 0.05 NK_HLA L2
ENSG00000136026 CKAP4 -996050 sc-eQTL 3.41e-01 -0.164 0.172 0.05 NK_HLA L2
ENSG00000136044 APPL2 72026 sc-eQTL 1.84e-01 -0.253 0.189 0.05 NK_HLA L2
ENSG00000136051 WASHC4 200905 sc-eQTL 4.58e-01 -0.146 0.197 0.05 NK_HLA L2
ENSG00000151131 C12orf45 321913 sc-eQTL 2.56e-01 0.225 0.198 0.05 NK_HLA L2
ENSG00000166046 TCP11L2 -993700 sc-eQTL 5.97e-01 0.103 0.194 0.05 NK_HLA L2
ENSG00000171310 CHST11 852934 sc-eQTL 2.11e-01 -0.217 0.173 0.05 NK_HLA L2
ENSG00000235162 C12orf75 72939 sc-eQTL 3.10e-01 -0.145 0.142 0.05 NK_HLA L2
ENSG00000136026 CKAP4 -996050 sc-eQTL 9.33e-02 -0.182 0.108 0.07 PB L2
ENSG00000136044 APPL2 72026 sc-eQTL 6.01e-01 0.103 0.197 0.07 PB L2
ENSG00000136051 WASHC4 200905 sc-eQTL 9.25e-01 0.0159 0.168 0.07 PB L2
ENSG00000136052 SLC41A2 349485 sc-eQTL 2.77e-01 0.194 0.178 0.07 PB L2
ENSG00000151131 C12orf45 321913 sc-eQTL 1.52e-01 0.252 0.175 0.07 PB L2
ENSG00000166046 TCP11L2 -993700 sc-eQTL 4.99e-01 0.123 0.182 0.07 PB L2
ENSG00000171310 CHST11 852934 sc-eQTL 3.13e-01 -0.16 0.158 0.07 PB L2
ENSG00000235162 C12orf75 72939 sc-eQTL 2.84e-01 -0.132 0.123 0.07 PB L2
ENSG00000136026 CKAP4 -996050 sc-eQTL 9.57e-01 -0.00985 0.184 0.051 intMono L2
ENSG00000136044 APPL2 72026 sc-eQTL 2.84e-01 -0.207 0.192 0.051 intMono L2
ENSG00000136051 WASHC4 200905 sc-eQTL 9.87e-01 0.00275 0.163 0.051 intMono L2
ENSG00000151131 C12orf45 321913 sc-eQTL 3.96e-02 0.405 0.195 0.051 intMono L2
ENSG00000166046 TCP11L2 -993700 sc-eQTL 4.70e-01 0.149 0.206 0.051 intMono L2
ENSG00000171310 CHST11 852934 sc-eQTL 6.44e-01 -0.0824 0.178 0.051 intMono L2
ENSG00000235162 C12orf75 72939 sc-eQTL 7.81e-01 0.0475 0.17 0.051 intMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136010 ALDH1L2 200586 eQTL 0.0155 0.186 0.0767 0.0 0.0 0.0299
ENSG00000136044 APPL2 72026 pQTL 3.76e-05 0.107 0.0259 0.0 0.0 0.035

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina