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Genes within 1Mb (chr12:104460233:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000111696 NT5DC3 618999 sc-eQTL 2.15e-01 0.242 0.194 0.948 DC L1
ENSG00000111727 HCFC2 395702 sc-eQTL 7.11e-01 0.0774 0.209 0.948 DC L1
ENSG00000120837 NFYB 321992 sc-eQTL 2.50e-01 0.216 0.187 0.948 DC L1
ENSG00000136044 APPL2 -775970 sc-eQTL 4.15e-01 0.156 0.191 0.948 DC L1
ENSG00000136051 WASHC4 -647091 sc-eQTL 3.18e-01 0.154 0.154 0.948 DC L1
ENSG00000136052 SLC41A2 -498511 sc-eQTL 3.91e-01 -0.112 0.13 0.948 DC L1
ENSG00000139372 TDG 494411 sc-eQTL 1.51e-01 -0.275 0.191 0.948 DC L1
ENSG00000151131 C12orf45 -526083 sc-eQTL 8.87e-01 0.0166 0.117 0.948 DC L1
ENSG00000166598 HSP90B1 530126 sc-eQTL 1.23e-01 -0.194 0.125 0.948 DC L1
ENSG00000171310 CHST11 4938 sc-eQTL 7.21e-01 -0.0585 0.163 0.948 DC L1
ENSG00000179088 C12orf42 964223 sc-eQTL 6.92e-01 -0.0653 0.165 0.948 DC L1
ENSG00000198431 TXNRD1 244454 sc-eQTL 9.66e-01 -0.00779 0.18 0.948 DC L1
ENSG00000204954 C12orf73 494525 sc-eQTL 4.24e-01 0.158 0.198 0.948 DC L1
ENSG00000235162 C12orf75 -775057 sc-eQTL 8.65e-01 -0.0134 0.0783 0.948 DC L1
ENSG00000255150 EID3 156494 sc-eQTL 2.76e-01 0.201 0.184 0.948 DC L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000111696 NT5DC3 618999 sc-eQTL 4.85e-01 -0.132 0.188 0.946 B_Activated L2
ENSG00000111727 HCFC2 395702 sc-eQTL 9.06e-02 -0.35 0.206 0.946 B_Activated L2
ENSG00000120837 NFYB 321992 sc-eQTL 3.07e-01 0.229 0.223 0.946 B_Activated L2
ENSG00000136044 APPL2 -775970 sc-eQTL 4.04e-01 0.182 0.217 0.946 B_Activated L2
ENSG00000136051 WASHC4 -647091 sc-eQTL 2.01e-02 -0.478 0.203 0.946 B_Activated L2
ENSG00000136052 SLC41A2 -498511 sc-eQTL 5.75e-01 -0.0867 0.154 0.946 B_Activated L2
ENSG00000139372 TDG 494411 sc-eQTL 5.27e-01 0.141 0.223 0.946 B_Activated L2
ENSG00000151131 C12orf45 -526083 sc-eQTL 6.79e-01 -0.089 0.214 0.946 B_Activated L2
ENSG00000166598 HSP90B1 530126 sc-eQTL 4.81e-01 -0.17 0.241 0.946 B_Activated L2
ENSG00000171310 CHST11 4938 sc-eQTL 8.11e-01 0.05 0.209 0.946 B_Activated L2
ENSG00000179088 C12orf42 964223 sc-eQTL 6.51e-01 0.0834 0.184 0.946 B_Activated L2
ENSG00000198431 TXNRD1 244454 sc-eQTL 2.27e-01 -0.266 0.22 0.946 B_Activated L2
ENSG00000204954 C12orf73 494525 sc-eQTL 5.05e-01 -0.135 0.202 0.946 B_Activated L2
ENSG00000235162 C12orf75 -775057 sc-eQTL 2.67e-01 -0.231 0.208 0.946 B_Activated L2
ENSG00000255150 EID3 156494 sc-eQTL 2.73e-02 0.457 0.205 0.946 B_Activated L2
ENSG00000111696 NT5DC3 618999 sc-eQTL 2.98e-01 0.187 0.18 0.948 CD4_CTL L2
ENSG00000111727 HCFC2 395702 sc-eQTL 4.84e-01 -0.143 0.204 0.948 CD4_CTL L2
ENSG00000120837 NFYB 321992 sc-eQTL 2.91e-01 0.215 0.203 0.948 CD4_CTL L2
ENSG00000136044 APPL2 -775970 sc-eQTL 6.45e-01 -0.0924 0.2 0.948 CD4_CTL L2
ENSG00000136051 WASHC4 -647091 sc-eQTL 2.09e-01 0.241 0.192 0.948 CD4_CTL L2
ENSG00000139372 TDG 494411 sc-eQTL 2.07e-01 0.27 0.213 0.948 CD4_CTL L2
ENSG00000151131 C12orf45 -526083 sc-eQTL 5.58e-01 0.113 0.193 0.948 CD4_CTL L2
ENSG00000166598 HSP90B1 530126 sc-eQTL 8.12e-01 0.0433 0.181 0.948 CD4_CTL L2
ENSG00000171310 CHST11 4938 sc-eQTL 7.39e-01 -0.0577 0.173 0.948 CD4_CTL L2
ENSG00000179088 C12orf42 964223 sc-eQTL 6.52e-01 0.0837 0.186 0.948 CD4_CTL L2
ENSG00000198431 TXNRD1 244454 sc-eQTL 5.44e-01 -0.126 0.207 0.948 CD4_CTL L2
ENSG00000204954 C12orf73 494525 sc-eQTL 2.88e-01 0.213 0.2 0.948 CD4_CTL L2
ENSG00000235162 C12orf75 -775057 sc-eQTL 4.54e-01 0.0874 0.117 0.948 CD4_CTL L2
ENSG00000255150 EID3 156494 sc-eQTL 8.18e-01 0.0476 0.206 0.948 CD4_CTL L2
ENSG00000111696 NT5DC3 618999 sc-eQTL 4.14e-01 0.151 0.184 0.947 CD8_TCM L2
ENSG00000111727 HCFC2 395702 sc-eQTL 5.10e-02 0.399 0.203 0.947 CD8_TCM L2
ENSG00000120837 NFYB 321992 sc-eQTL 8.62e-01 -0.0361 0.207 0.947 CD8_TCM L2
ENSG00000136044 APPL2 -775970 sc-eQTL 8.98e-01 0.0262 0.204 0.947 CD8_TCM L2
ENSG00000136051 WASHC4 -647091 sc-eQTL 1.40e-01 -0.304 0.205 0.947 CD8_TCM L2
ENSG00000139372 TDG 494411 sc-eQTL 3.15e-01 -0.205 0.203 0.947 CD8_TCM L2
ENSG00000151131 C12orf45 -526083 sc-eQTL 6.69e-01 0.094 0.219 0.947 CD8_TCM L2
ENSG00000166598 HSP90B1 530126 sc-eQTL 7.44e-01 -0.0633 0.194 0.947 CD8_TCM L2
ENSG00000171310 CHST11 4938 sc-eQTL 6.66e-01 -0.062 0.143 0.947 CD8_TCM L2
ENSG00000179088 C12orf42 964223 sc-eQTL 6.55e-01 -0.085 0.19 0.947 CD8_TCM L2
ENSG00000198431 TXNRD1 244454 sc-eQTL 9.76e-01 -0.00648 0.212 0.947 CD8_TCM L2
ENSG00000204954 C12orf73 494525 sc-eQTL 8.95e-01 -0.0279 0.211 0.947 CD8_TCM L2
ENSG00000235162 C12orf75 -775057 sc-eQTL 5.55e-01 -0.115 0.194 0.947 CD8_TCM L2
ENSG00000255150 EID3 156494 sc-eQTL 5.25e-01 -0.133 0.208 0.947 CD8_TCM L2
ENSG00000111696 NT5DC3 618999 sc-eQTL 2.98e-01 0.2 0.192 0.947 CD8_TEM L2
ENSG00000111727 HCFC2 395702 sc-eQTL 1.43e-01 0.307 0.208 0.947 CD8_TEM L2
ENSG00000120837 NFYB 321992 sc-eQTL 2.68e-02 -0.441 0.197 0.947 CD8_TEM L2
ENSG00000136044 APPL2 -775970 sc-eQTL 2.76e-01 0.233 0.214 0.947 CD8_TEM L2
ENSG00000136051 WASHC4 -647091 sc-eQTL 5.21e-02 -0.429 0.22 0.947 CD8_TEM L2
ENSG00000139372 TDG 494411 sc-eQTL 8.33e-01 -0.0453 0.214 0.947 CD8_TEM L2
ENSG00000151131 C12orf45 -526083 sc-eQTL 6.19e-02 0.403 0.214 0.947 CD8_TEM L2
ENSG00000166598 HSP90B1 530126 sc-eQTL 5.25e-01 0.127 0.199 0.947 CD8_TEM L2
ENSG00000171310 CHST11 4938 sc-eQTL 6.55e-01 0.0944 0.211 0.947 CD8_TEM L2
ENSG00000179088 C12orf42 964223 sc-eQTL 1.34e-01 -0.3 0.199 0.947 CD8_TEM L2
ENSG00000198431 TXNRD1 244454 sc-eQTL 7.62e-01 0.064 0.211 0.947 CD8_TEM L2
ENSG00000204954 C12orf73 494525 sc-eQTL 6.79e-01 -0.0851 0.205 0.947 CD8_TEM L2
ENSG00000235162 C12orf75 -775057 sc-eQTL 8.03e-01 -0.0413 0.165 0.947 CD8_TEM L2
ENSG00000255150 EID3 156494 sc-eQTL 2.22e-02 0.483 0.209 0.947 CD8_TEM L2
ENSG00000111727 HCFC2 395702 sc-eQTL 2.89e-02 0.467 0.212 0.95 NK_HLA L2
ENSG00000120837 NFYB 321992 sc-eQTL 2.01e-01 0.279 0.217 0.95 NK_HLA L2
ENSG00000136044 APPL2 -775970 sc-eQTL 3.43e-01 -0.192 0.202 0.95 NK_HLA L2
ENSG00000136051 WASHC4 -647091 sc-eQTL 5.53e-02 -0.4 0.207 0.95 NK_HLA L2
ENSG00000139372 TDG 494411 sc-eQTL 5.05e-01 0.143 0.215 0.95 NK_HLA L2
ENSG00000151131 C12orf45 -526083 sc-eQTL 7.51e-01 -0.0671 0.211 0.95 NK_HLA L2
ENSG00000166598 HSP90B1 530126 sc-eQTL 6.61e-01 -0.0928 0.211 0.95 NK_HLA L2
ENSG00000171310 CHST11 4938 sc-eQTL 6.46e-01 0.085 0.185 0.95 NK_HLA L2
ENSG00000198431 TXNRD1 244454 sc-eQTL 9.08e-01 0.0261 0.226 0.95 NK_HLA L2
ENSG00000204954 C12orf73 494525 sc-eQTL 1.59e-01 0.275 0.195 0.95 NK_HLA L2
ENSG00000235162 C12orf75 -775057 sc-eQTL 5.62e-01 -0.0878 0.151 0.95 NK_HLA L2
ENSG00000255150 EID3 156494 sc-eQTL 7.82e-01 -0.0566 0.204 0.95 NK_HLA L2
ENSG00000111696 NT5DC3 618999 sc-eQTL 7.39e-01 -0.0601 0.18 0.95 Pro_T L2
ENSG00000111727 HCFC2 395702 sc-eQTL 8.55e-01 -0.0359 0.196 0.95 Pro_T L2
ENSG00000120837 NFYB 321992 sc-eQTL 9.84e-01 0.00414 0.202 0.95 Pro_T L2
ENSG00000136044 APPL2 -775970 sc-eQTL 4.78e-01 0.14 0.197 0.95 Pro_T L2
ENSG00000136051 WASHC4 -647091 sc-eQTL 5.13e-01 0.144 0.22 0.95 Pro_T L2
ENSG00000139372 TDG 494411 sc-eQTL 2.40e-01 -0.225 0.191 0.95 Pro_T L2
ENSG00000151131 C12orf45 -526083 sc-eQTL 2.22e-01 -0.205 0.167 0.95 Pro_T L2
ENSG00000166598 HSP90B1 530126 sc-eQTL 5.81e-01 0.0741 0.134 0.95 Pro_T L2
ENSG00000171310 CHST11 4938 sc-eQTL 8.21e-01 -0.0429 0.19 0.95 Pro_T L2
ENSG00000179088 C12orf42 964223 sc-eQTL 4.00e-01 -0.155 0.184 0.95 Pro_T L2
ENSG00000198431 TXNRD1 244454 sc-eQTL 1.70e-01 0.224 0.162 0.95 Pro_T L2
ENSG00000204954 C12orf73 494525 sc-eQTL 8.31e-01 0.0405 0.189 0.95 Pro_T L2
ENSG00000235162 C12orf75 -775057 sc-eQTL 8.51e-01 -0.0264 0.14 0.95 Pro_T L2
ENSG00000255150 EID3 156494 sc-eQTL 1.49e-01 -0.306 0.211 0.95 Pro_T L2
ENSG00000111696 NT5DC3 618999 sc-eQTL 3.24e-01 -0.204 0.206 0.936 gdT L2
ENSG00000111727 HCFC2 395702 sc-eQTL 7.20e-01 0.0767 0.214 0.936 gdT L2
ENSG00000120837 NFYB 321992 sc-eQTL 5.87e-02 -0.385 0.202 0.936 gdT L2
ENSG00000136044 APPL2 -775970 sc-eQTL 5.83e-01 -0.109 0.198 0.936 gdT L2
ENSG00000136051 WASHC4 -647091 sc-eQTL 4.19e-01 0.189 0.234 0.936 gdT L2
ENSG00000139372 TDG 494411 sc-eQTL 8.89e-01 0.0289 0.206 0.936 gdT L2
ENSG00000151131 C12orf45 -526083 sc-eQTL 7.83e-01 0.0643 0.233 0.936 gdT L2
ENSG00000166598 HSP90B1 530126 sc-eQTL 3.19e-01 -0.217 0.217 0.936 gdT L2
ENSG00000171310 CHST11 4938 sc-eQTL 5.54e-01 0.114 0.193 0.936 gdT L2
ENSG00000179088 C12orf42 964223 sc-eQTL 9.25e-02 0.342 0.202 0.936 gdT L2
ENSG00000198431 TXNRD1 244454 sc-eQTL 1.60e-01 0.32 0.227 0.936 gdT L2
ENSG00000204954 C12orf73 494525 sc-eQTL 3.75e-01 -0.184 0.207 0.936 gdT L2
ENSG00000235162 C12orf75 -775057 sc-eQTL 1.92e-01 0.241 0.184 0.936 gdT L2
ENSG00000255150 EID3 156494 sc-eQTL 9.45e-02 0.377 0.224 0.936 gdT L2
ENSG00000111696 NT5DC3 618999 sc-eQTL 7.46e-01 0.0624 0.192 0.949 intMono L2
ENSG00000111727 HCFC2 395702 sc-eQTL 2.66e-01 0.227 0.203 0.949 intMono L2
ENSG00000120837 NFYB 321992 sc-eQTL 9.99e-01 -0.000203 0.213 0.949 intMono L2
ENSG00000136044 APPL2 -775970 sc-eQTL 3.43e-01 -0.196 0.206 0.949 intMono L2
ENSG00000136051 WASHC4 -647091 sc-eQTL 4.06e-01 0.145 0.174 0.949 intMono L2
ENSG00000139372 TDG 494411 sc-eQTL 5.52e-01 -0.118 0.199 0.949 intMono L2
ENSG00000151131 C12orf45 -526083 sc-eQTL 7.38e-01 -0.0706 0.211 0.949 intMono L2
ENSG00000166598 HSP90B1 530126 sc-eQTL 4.46e-01 -0.135 0.177 0.949 intMono L2
ENSG00000171310 CHST11 4938 sc-eQTL 1.52e-02 0.46 0.188 0.949 intMono L2
ENSG00000198431 TXNRD1 244454 sc-eQTL 4.53e-01 0.154 0.205 0.949 intMono L2
ENSG00000204954 C12orf73 494525 sc-eQTL 7.04e-01 0.0693 0.182 0.949 intMono L2
ENSG00000235162 C12orf75 -775057 sc-eQTL 2.37e-01 -0.215 0.182 0.949 intMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000213442 \N 194924 4.54e-06 4.86e-06 8.36e-07 2.61e-06 8.73e-07 1.6e-06 4.23e-06 9.78e-07 4.99e-06 2.35e-06 5.33e-06 3.32e-06 7.38e-06 1.76e-06 1.39e-06 3.84e-06 2.06e-06 3.43e-06 1.27e-06 1.09e-06 2.78e-06 4.95e-06 3.63e-06 1.87e-06 7.21e-06 1.67e-06 2.35e-06 1.73e-06 4.45e-06 3.86e-06 2.75e-06 4.18e-07 6.52e-07 1.57e-06 1.97e-06 9.53e-07 1.12e-06 4.5e-07 9.46e-07 6.03e-07 7.35e-07 5.58e-06 1.39e-06 1.66e-07 4.54e-07 5.88e-07 1.16e-06 8.04e-07 4.71e-07