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Genes within 1Mb (chr12:103211559:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 729815 sc-eQTL 5.90e-01 0.0216 0.0401 0.37 B L1
ENSG00000111696 NT5DC3 -629675 sc-eQTL 1.71e-01 -0.12 0.0876 0.37 B L1
ENSG00000111727 HCFC2 -852972 sc-eQTL 1.74e-01 0.111 0.0816 0.37 B L1
ENSG00000120837 NFYB -926682 sc-eQTL 6.61e-01 0.0347 0.0791 0.37 B L1
ENSG00000139372 TDG -754263 sc-eQTL 9.19e-01 -0.00801 0.079 0.37 B L1
ENSG00000166598 HSP90B1 -718548 sc-eQTL 3.56e-01 0.0457 0.0495 0.37 B L1
ENSG00000179088 C12orf42 -284451 sc-eQTL 2.37e-01 0.0874 0.0737 0.37 B L1
ENSG00000204954 C12orf73 -754149 sc-eQTL 2.86e-01 0.0909 0.085 0.37 B L1
ENSG00000111696 NT5DC3 -629675 sc-eQTL 8.82e-01 -0.0112 0.0754 0.37 CD4T L1
ENSG00000111727 HCFC2 -852972 sc-eQTL 5.73e-01 -0.0427 0.0757 0.37 CD4T L1
ENSG00000120837 NFYB -926682 sc-eQTL 7.73e-01 -0.0188 0.0651 0.37 CD4T L1
ENSG00000139372 TDG -754263 sc-eQTL 5.77e-01 -0.0375 0.067 0.37 CD4T L1
ENSG00000166598 HSP90B1 -718548 sc-eQTL 5.43e-01 0.0441 0.0724 0.37 CD4T L1
ENSG00000179088 C12orf42 -284451 sc-eQTL 1.35e-01 0.125 0.0831 0.37 CD4T L1
ENSG00000204954 C12orf73 -754149 sc-eQTL 7.12e-01 -0.0267 0.072 0.37 CD4T L1
ENSG00000111696 NT5DC3 -629675 sc-eQTL 5.02e-01 0.0516 0.0768 0.37 CD8T L1
ENSG00000111727 HCFC2 -852972 sc-eQTL 8.36e-01 -0.0172 0.083 0.37 CD8T L1
ENSG00000120837 NFYB -926682 sc-eQTL 5.37e-01 -0.0481 0.0779 0.37 CD8T L1
ENSG00000139372 TDG -754263 sc-eQTL 6.15e-01 0.0353 0.0701 0.37 CD8T L1
ENSG00000166598 HSP90B1 -718548 sc-eQTL 7.76e-01 0.0211 0.0743 0.37 CD8T L1
ENSG00000179088 C12orf42 -284451 sc-eQTL 9.67e-01 0.00369 0.0898 0.37 CD8T L1
ENSG00000204954 C12orf73 -754149 sc-eQTL 2.80e-01 0.0924 0.0853 0.37 CD8T L1
ENSG00000111696 NT5DC3 -629675 sc-eQTL 8.94e-01 0.0124 0.0931 0.374 DC L1
ENSG00000111727 HCFC2 -852972 sc-eQTL 5.93e-02 -0.188 0.0989 0.374 DC L1
ENSG00000120837 NFYB -926682 sc-eQTL 2.40e-01 -0.105 0.0891 0.374 DC L1
ENSG00000139372 TDG -754263 sc-eQTL 9.55e-01 -0.0052 0.0914 0.374 DC L1
ENSG00000166598 HSP90B1 -718548 sc-eQTL 7.14e-01 0.022 0.06 0.374 DC L1
ENSG00000179088 C12orf42 -284451 sc-eQTL 7.50e-01 0.0251 0.0786 0.374 DC L1
ENSG00000204954 C12orf73 -754149 sc-eQTL 5.31e-01 -0.0594 0.0945 0.374 DC L1
ENSG00000111696 NT5DC3 -629675 sc-eQTL 3.32e-01 0.0939 0.0965 0.37 Mono L1
ENSG00000111727 HCFC2 -852972 sc-eQTL 9.17e-01 -0.00926 0.0891 0.37 Mono L1
ENSG00000120837 NFYB -926682 sc-eQTL 2.52e-01 -0.0955 0.083 0.37 Mono L1
ENSG00000139372 TDG -754263 sc-eQTL 9.43e-01 -0.00459 0.064 0.37 Mono L1
ENSG00000166598 HSP90B1 -718548 sc-eQTL 6.34e-01 -0.0305 0.064 0.37 Mono L1
ENSG00000204954 C12orf73 -754149 sc-eQTL 8.53e-01 -0.0152 0.0822 0.37 Mono L1
ENSG00000111727 HCFC2 -852972 sc-eQTL 1.90e-01 -0.112 0.0856 0.369 NK L1
ENSG00000120837 NFYB -926682 sc-eQTL 2.65e-01 -0.0884 0.079 0.369 NK L1
ENSG00000139372 TDG -754263 sc-eQTL 8.94e-01 0.00988 0.0738 0.369 NK L1
ENSG00000166598 HSP90B1 -718548 sc-eQTL 8.90e-01 -0.0113 0.0816 0.369 NK L1
ENSG00000204954 C12orf73 -754149 sc-eQTL 4.74e-02 0.161 0.0807 0.369 NK L1
ENSG00000017427 IGF1 729815 sc-eQTL 9.77e-01 -0.000891 0.0304 0.37 Other_T L1
ENSG00000111696 NT5DC3 -629675 sc-eQTL 2.88e-01 -0.0926 0.0869 0.37 Other_T L1
ENSG00000111727 HCFC2 -852972 sc-eQTL 3.04e-01 0.0914 0.0886 0.37 Other_T L1
ENSG00000120837 NFYB -926682 sc-eQTL 8.82e-01 -0.012 0.0805 0.37 Other_T L1
ENSG00000139372 TDG -754263 sc-eQTL 6.31e-01 0.0372 0.0773 0.37 Other_T L1
ENSG00000166598 HSP90B1 -718548 sc-eQTL 3.00e-01 -0.0727 0.0699 0.37 Other_T L1
ENSG00000179088 C12orf42 -284451 sc-eQTL 3.91e-01 0.0755 0.0878 0.37 Other_T L1
ENSG00000204954 C12orf73 -754149 sc-eQTL 1.04e-01 0.147 0.09 0.37 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 729815 sc-eQTL 3.17e-01 0.0196 0.0196 0.378 B_Activated L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 2.93e-01 0.0958 0.0908 0.378 B_Activated L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 7.90e-01 -0.0267 0.1 0.378 B_Activated L2
ENSG00000120837 NFYB -926682 sc-eQTL 7.39e-01 0.0361 0.108 0.378 B_Activated L2
ENSG00000139372 TDG -754263 sc-eQTL 1.30e-01 -0.163 0.107 0.378 B_Activated L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 4.84e-01 0.0817 0.117 0.378 B_Activated L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 7.03e-01 -0.034 0.089 0.378 B_Activated L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 9.00e-01 -0.0123 0.0977 0.378 B_Activated L2
ENSG00000017427 IGF1 729815 sc-eQTL 1.75e-01 0.056 0.0412 0.367 B_Intermediate L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 3.31e-01 -0.0905 0.0929 0.367 B_Intermediate L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 9.28e-01 -0.00885 0.0973 0.367 B_Intermediate L2
ENSG00000120837 NFYB -926682 sc-eQTL 2.72e-01 0.114 0.103 0.367 B_Intermediate L2
ENSG00000139372 TDG -754263 sc-eQTL 9.52e-01 -0.00624 0.104 0.367 B_Intermediate L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 1.17e-01 0.146 0.0926 0.367 B_Intermediate L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 8.96e-01 -0.0119 0.0909 0.367 B_Intermediate L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 3.33e-01 0.0954 0.0982 0.367 B_Intermediate L2
ENSG00000017427 IGF1 729815 sc-eQTL 8.25e-01 -0.00824 0.0372 0.373 B_Memory L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 8.52e-01 -0.0175 0.0938 0.373 B_Memory L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 7.34e-01 -0.0343 0.101 0.373 B_Memory L2
ENSG00000120837 NFYB -926682 sc-eQTL 7.87e-01 0.0271 0.0999 0.373 B_Memory L2
ENSG00000139372 TDG -754263 sc-eQTL 9.28e-01 0.00919 0.102 0.373 B_Memory L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 1.93e-01 0.117 0.0898 0.373 B_Memory L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 6.82e-01 -0.0382 0.093 0.373 B_Memory L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 6.83e-01 0.0406 0.0992 0.373 B_Memory L2
ENSG00000017427 IGF1 729815 sc-eQTL 9.50e-01 0.00319 0.0509 0.37 B_Naive1 L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 4.80e-01 -0.064 0.0904 0.37 B_Naive1 L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 2.07e-02 0.228 0.0979 0.37 B_Naive1 L2
ENSG00000120837 NFYB -926682 sc-eQTL 1.86e-01 -0.125 0.0939 0.37 B_Naive1 L2
ENSG00000139372 TDG -754263 sc-eQTL 4.97e-01 0.0594 0.0873 0.37 B_Naive1 L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 3.10e-01 0.0756 0.0743 0.37 B_Naive1 L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 6.31e-01 -0.0464 0.0965 0.37 B_Naive1 L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 3.54e-01 -0.0884 0.0952 0.37 B_Naive1 L2
ENSG00000017427 IGF1 729815 sc-eQTL 6.78e-01 0.0186 0.0447 0.371 B_Naive2 L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 7.17e-01 0.0348 0.0958 0.371 B_Naive2 L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 9.66e-01 0.00434 0.101 0.371 B_Naive2 L2
ENSG00000120837 NFYB -926682 sc-eQTL 2.65e-01 0.109 0.098 0.371 B_Naive2 L2
ENSG00000139372 TDG -754263 sc-eQTL 1.50e-01 -0.129 0.0893 0.371 B_Naive2 L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 2.08e-01 0.115 0.0908 0.371 B_Naive2 L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 1.87e-01 0.125 0.0944 0.371 B_Naive2 L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 7.67e-03 0.264 0.0982 0.371 B_Naive2 L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 9.52e-03 -0.222 0.0849 0.377 CD4_CTL L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 1.21e-01 0.152 0.0974 0.377 CD4_CTL L2
ENSG00000120837 NFYB -926682 sc-eQTL 8.41e-01 -0.0196 0.0975 0.377 CD4_CTL L2
ENSG00000139372 TDG -754263 sc-eQTL 9.49e-02 0.171 0.102 0.377 CD4_CTL L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 6.22e-01 0.043 0.087 0.377 CD4_CTL L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 7.85e-01 0.0243 0.089 0.377 CD4_CTL L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 9.55e-01 0.0055 0.0963 0.377 CD4_CTL L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 8.97e-01 0.0101 0.0783 0.37 CD4_Naive L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 9.50e-01 -0.00509 0.0815 0.37 CD4_Naive L2
ENSG00000120837 NFYB -926682 sc-eQTL 7.17e-01 -0.0254 0.07 0.37 CD4_Naive L2
ENSG00000139372 TDG -754263 sc-eQTL 5.65e-01 -0.0408 0.0708 0.37 CD4_Naive L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 6.98e-01 0.028 0.0722 0.37 CD4_Naive L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 1.53e-01 0.124 0.0864 0.37 CD4_Naive L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 6.60e-01 0.0348 0.0791 0.37 CD4_Naive L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 9.31e-01 -0.00793 0.0912 0.37 CD4_TCM L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 1.25e-01 -0.149 0.0965 0.37 CD4_TCM L2
ENSG00000120837 NFYB -926682 sc-eQTL 9.24e-01 0.00834 0.0871 0.37 CD4_TCM L2
ENSG00000139372 TDG -754263 sc-eQTL 4.49e-01 -0.0597 0.0788 0.37 CD4_TCM L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 3.96e-01 0.066 0.0776 0.37 CD4_TCM L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 6.46e-01 0.0415 0.0901 0.37 CD4_TCM L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 4.84e-01 0.0624 0.0891 0.37 CD4_TCM L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 1.42e-01 -0.141 0.0957 0.37 CD4_TEM L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 4.66e-01 0.0716 0.098 0.37 CD4_TEM L2
ENSG00000120837 NFYB -926682 sc-eQTL 1.44e-01 0.137 0.0931 0.37 CD4_TEM L2
ENSG00000139372 TDG -754263 sc-eQTL 8.82e-01 0.0137 0.0927 0.37 CD4_TEM L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 6.14e-01 -0.0465 0.0921 0.37 CD4_TEM L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 3.76e-01 0.085 0.0957 0.37 CD4_TEM L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 3.84e-01 -0.0809 0.0927 0.37 CD4_TEM L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 6.13e-01 0.0432 0.0853 0.37 CD8_CTL L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 9.51e-01 0.00594 0.0962 0.37 CD8_CTL L2
ENSG00000120837 NFYB -926682 sc-eQTL 3.23e-01 -0.0896 0.0905 0.37 CD8_CTL L2
ENSG00000139372 TDG -754263 sc-eQTL 3.40e-01 0.0862 0.0901 0.37 CD8_CTL L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 8.14e-01 -0.0187 0.0793 0.37 CD8_CTL L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 3.27e-01 -0.0914 0.093 0.37 CD8_CTL L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 7.85e-02 0.151 0.0854 0.37 CD8_CTL L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 7.63e-01 -0.0269 0.0888 0.37 CD8_Naive L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 5.15e-01 -0.0635 0.0974 0.37 CD8_Naive L2
ENSG00000120837 NFYB -926682 sc-eQTL 2.36e-01 -0.107 0.0899 0.37 CD8_Naive L2
ENSG00000139372 TDG -754263 sc-eQTL 7.87e-01 0.0219 0.081 0.37 CD8_Naive L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 6.62e-01 -0.0337 0.077 0.37 CD8_Naive L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 8.91e-01 -0.0127 0.0922 0.37 CD8_Naive L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 7.23e-01 -0.0317 0.0894 0.37 CD8_Naive L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 2.34e-01 0.104 0.0868 0.373 CD8_TCM L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 5.88e-01 0.0526 0.0969 0.373 CD8_TCM L2
ENSG00000120837 NFYB -926682 sc-eQTL 8.61e-01 0.0171 0.0976 0.373 CD8_TCM L2
ENSG00000139372 TDG -754263 sc-eQTL 5.90e-01 -0.0519 0.0961 0.373 CD8_TCM L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 4.73e-01 0.0657 0.0914 0.373 CD8_TCM L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 5.53e-01 0.0534 0.0898 0.373 CD8_TCM L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 5.87e-01 0.0542 0.0995 0.373 CD8_TCM L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 2.48e-01 0.106 0.0913 0.372 CD8_TEM L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 1.92e-01 -0.13 0.0992 0.372 CD8_TEM L2
ENSG00000120837 NFYB -926682 sc-eQTL 8.44e-01 -0.0188 0.0951 0.372 CD8_TEM L2
ENSG00000139372 TDG -754263 sc-eQTL 2.68e-01 -0.113 0.102 0.372 CD8_TEM L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 5.27e-01 0.0601 0.0948 0.372 CD8_TEM L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 8.91e-01 -0.0131 0.0953 0.372 CD8_TEM L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 1.53e-01 0.139 0.0971 0.372 CD8_TEM L2
ENSG00000017427 IGF1 729815 sc-eQTL 9.31e-01 -0.00285 0.033 0.372 MAIT L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 2.49e-01 -0.106 0.0918 0.372 MAIT L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 6.56e-01 0.0421 0.0943 0.372 MAIT L2
ENSG00000120837 NFYB -926682 sc-eQTL 9.65e-01 0.00403 0.0918 0.372 MAIT L2
ENSG00000139372 TDG -754263 sc-eQTL 1.85e-01 0.131 0.0988 0.372 MAIT L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 2.09e-01 -0.121 0.096 0.372 MAIT L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 2.67e-01 0.096 0.0862 0.372 MAIT L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 1.69e-01 0.133 0.0967 0.372 MAIT L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 6.59e-01 0.0415 0.0939 0.371 NK_CD56bright L2
ENSG00000120837 NFYB -926682 sc-eQTL 5.55e-01 -0.0562 0.095 0.371 NK_CD56bright L2
ENSG00000139372 TDG -754263 sc-eQTL 4.79e-01 -0.0685 0.0966 0.371 NK_CD56bright L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 7.81e-01 0.0267 0.0955 0.371 NK_CD56bright L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 6.99e-01 -0.0392 0.101 0.371 NK_CD56bright L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 3.52e-01 -0.0893 0.0958 0.369 NK_CD56dim L2
ENSG00000120837 NFYB -926682 sc-eQTL 8.35e-01 -0.0179 0.0857 0.369 NK_CD56dim L2
ENSG00000139372 TDG -754263 sc-eQTL 8.46e-01 0.0158 0.0813 0.369 NK_CD56dim L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 4.44e-01 -0.0623 0.0813 0.369 NK_CD56dim L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 4.42e-02 0.187 0.0925 0.369 NK_CD56dim L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 3.78e-01 -0.0884 0.1 0.372 NK_HLA L2
ENSG00000120837 NFYB -926682 sc-eQTL 8.09e-01 -0.0247 0.102 0.372 NK_HLA L2
ENSG00000139372 TDG -754263 sc-eQTL 9.11e-01 -0.0112 0.101 0.372 NK_HLA L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 3.84e-01 -0.0861 0.0986 0.372 NK_HLA L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 7.87e-01 -0.0247 0.0914 0.372 NK_HLA L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 2.99e-01 -0.101 0.0973 0.369 NK_cytokine L2
ENSG00000120837 NFYB -926682 sc-eQTL 5.72e-02 -0.16 0.0839 0.369 NK_cytokine L2
ENSG00000139372 TDG -754263 sc-eQTL 9.47e-01 -0.00577 0.0864 0.369 NK_cytokine L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 4.40e-01 0.0662 0.0857 0.369 NK_cytokine L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 1.07e-01 0.144 0.0892 0.369 NK_cytokine L2
ENSG00000017427 IGF1 729815 sc-eQTL 9.81e-03 0.195 0.0741 0.341 PB L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 4.39e-01 -0.0929 0.119 0.341 PB L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 4.14e-01 -0.0838 0.102 0.341 PB L2
ENSG00000120837 NFYB -926682 sc-eQTL 6.43e-01 0.0555 0.119 0.341 PB L2
ENSG00000139372 TDG -754263 sc-eQTL 5.30e-02 -0.235 0.12 0.341 PB L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 5.04e-02 0.109 0.0552 0.341 PB L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 6.25e-01 0.0481 0.0981 0.341 PB L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 9.98e-01 -0.000366 0.122 0.341 PB L2
ENSG00000017427 IGF1 729815 sc-eQTL 5.92e-01 0.0178 0.0331 0.37 Pro_T L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 5.29e-01 -0.0524 0.0831 0.37 Pro_T L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 6.42e-01 0.042 0.0903 0.37 Pro_T L2
ENSG00000120837 NFYB -926682 sc-eQTL 1.53e-01 -0.133 0.0929 0.37 Pro_T L2
ENSG00000139372 TDG -754263 sc-eQTL 2.47e-01 0.103 0.0882 0.37 Pro_T L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 8.91e-01 -0.00852 0.0619 0.37 Pro_T L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 6.39e-01 0.0399 0.0849 0.37 Pro_T L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 1.20e-01 0.136 0.0869 0.37 Pro_T L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 3.69e-01 0.0798 0.0887 0.37 Treg L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 2.27e-01 -0.123 0.101 0.37 Treg L2
ENSG00000120837 NFYB -926682 sc-eQTL 5.49e-01 -0.0542 0.0903 0.37 Treg L2
ENSG00000139372 TDG -754263 sc-eQTL 3.52e-01 -0.0931 0.0998 0.37 Treg L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 9.22e-01 -0.00911 0.0924 0.37 Treg L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 6.70e-01 0.0338 0.0793 0.37 Treg L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 3.64e-02 -0.208 0.0987 0.37 Treg L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 9.43e-01 0.0075 0.105 0.376 cDC L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 2.24e-01 -0.111 0.0912 0.376 cDC L2
ENSG00000120837 NFYB -926682 sc-eQTL 2.16e-01 -0.121 0.0976 0.376 cDC L2
ENSG00000139372 TDG -754263 sc-eQTL 7.84e-01 0.0276 0.101 0.376 cDC L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 4.09e-01 -0.0737 0.0892 0.376 cDC L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 6.20e-01 0.033 0.0665 0.376 cDC L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 5.97e-01 0.0493 0.0929 0.376 cDC L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 2.25e-01 0.111 0.0909 0.37 cMono_IL1B L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 8.41e-01 0.0187 0.093 0.37 cMono_IL1B L2
ENSG00000120837 NFYB -926682 sc-eQTL 4.69e-01 -0.0687 0.0946 0.37 cMono_IL1B L2
ENSG00000139372 TDG -754263 sc-eQTL 2.76e-01 -0.0791 0.0725 0.37 cMono_IL1B L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 3.32e-01 -0.0683 0.0702 0.37 cMono_IL1B L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 9.33e-01 0.00712 0.0844 0.37 cMono_IL1B L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 7.34e-01 0.0317 0.0932 0.37 cMono_S100A L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 5.01e-01 -0.0655 0.0972 0.37 cMono_S100A L2
ENSG00000120837 NFYB -926682 sc-eQTL 8.42e-01 -0.018 0.0904 0.37 cMono_S100A L2
ENSG00000139372 TDG -754263 sc-eQTL 4.14e-01 0.068 0.083 0.37 cMono_S100A L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 2.13e-01 -0.091 0.0728 0.37 cMono_S100A L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 8.91e-01 -0.0127 0.0922 0.37 cMono_S100A L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 8.50e-01 0.0199 0.105 0.397 gdT L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 2.60e-01 0.122 0.108 0.397 gdT L2
ENSG00000120837 NFYB -926682 sc-eQTL 3.30e-01 -0.101 0.103 0.397 gdT L2
ENSG00000139372 TDG -754263 sc-eQTL 8.79e-01 0.016 0.105 0.397 gdT L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 9.93e-02 -0.181 0.109 0.397 gdT L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 1.87e-01 -0.136 0.103 0.397 gdT L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 3.47e-01 0.0989 0.105 0.397 gdT L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 8.52e-01 -0.0171 0.0917 0.369 intMono L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 6.47e-01 -0.0445 0.097 0.369 intMono L2
ENSG00000120837 NFYB -926682 sc-eQTL 6.23e-01 0.0499 0.101 0.369 intMono L2
ENSG00000139372 TDG -754263 sc-eQTL 8.32e-01 0.0201 0.0947 0.369 intMono L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 4.94e-01 0.0579 0.0845 0.369 intMono L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 7.33e-01 -0.0297 0.0867 0.369 intMono L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 5.90e-01 0.0504 0.0934 0.371 ncMono L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 2.18e-01 -0.115 0.0933 0.371 ncMono L2
ENSG00000120837 NFYB -926682 sc-eQTL 4.94e-01 -0.0647 0.0943 0.371 ncMono L2
ENSG00000139372 TDG -754263 sc-eQTL 2.61e-01 0.103 0.0914 0.371 ncMono L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 6.84e-01 0.0331 0.0814 0.371 ncMono L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 8.88e-01 0.013 0.092 0.371 ncMono L2
ENSG00000111696 NT5DC3 -629675 sc-eQTL 8.06e-01 -0.0223 0.0906 0.373 pDC L2
ENSG00000111727 HCFC2 -852972 sc-eQTL 3.73e-02 -0.213 0.101 0.373 pDC L2
ENSG00000120837 NFYB -926682 sc-eQTL 9.94e-01 0.000753 0.107 0.373 pDC L2
ENSG00000139372 TDG -754263 sc-eQTL 7.17e-01 0.0331 0.0911 0.373 pDC L2
ENSG00000166598 HSP90B1 -718548 sc-eQTL 4.88e-01 0.0495 0.0711 0.373 pDC L2
ENSG00000179088 C12orf42 -284451 sc-eQTL 2.80e-01 0.1 0.0924 0.373 pDC L2
ENSG00000204954 C12orf73 -754149 sc-eQTL 2.10e-01 -0.111 0.0882 0.373 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 729815 sc-eQTL 2.96e-01 0.0494 0.0472 0.37 B_Memory LOneK1K
ENSG00000111696 NT5DC3 -629675 sc-eQTL 2.41e-01 -0.109 0.0923 0.37 B_Memory LOneK1K
ENSG00000111727 HCFC2 -852972 sc-eQTL 6.88e-01 -0.0401 0.0996 0.37 B_Memory LOneK1K
ENSG00000120837 NFYB -926682 sc-eQTL 1.33e-01 0.137 0.0907 0.37 B_Memory LOneK1K
ENSG00000139372 TDG -754263 sc-eQTL 6.79e-01 -0.04 0.0964 0.37 B_Memory LOneK1K
ENSG00000166598 HSP90B1 -718548 sc-eQTL 4.31e-02 0.174 0.0855 0.37 B_Memory LOneK1K
ENSG00000179088 C12orf42 -284451 sc-eQTL 7.85e-01 -0.0202 0.0739 0.37 B_Memory LOneK1K
ENSG00000204954 C12orf73 -754149 sc-eQTL 7.08e-01 0.0375 0.1 0.37 B_Memory LOneK1K
ENSG00000017427 IGF1 729815 sc-eQTL 8.33e-01 0.0114 0.0538 0.37 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -629675 sc-eQTL 5.88e-01 -0.0492 0.0906 0.37 B_Naive LOneK1K
ENSG00000111727 HCFC2 -852972 sc-eQTL 3.23e-02 0.209 0.0969 0.37 B_Naive LOneK1K
ENSG00000120837 NFYB -926682 sc-eQTL 6.13e-01 -0.0452 0.0893 0.37 B_Naive LOneK1K
ENSG00000139372 TDG -754263 sc-eQTL 6.80e-01 0.0344 0.0833 0.37 B_Naive LOneK1K
ENSG00000166598 HSP90B1 -718548 sc-eQTL 2.04e-01 0.0967 0.0759 0.37 B_Naive LOneK1K
ENSG00000179088 C12orf42 -284451 sc-eQTL 4.93e-01 0.0643 0.0935 0.37 B_Naive LOneK1K
ENSG00000204954 C12orf73 -754149 sc-eQTL 3.80e-01 0.0853 0.0969 0.37 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -629675 sc-eQTL 2.28e-01 0.113 0.0935 0.37 CD14_Mono LOneK1K
ENSG00000111727 HCFC2 -852972 sc-eQTL 9.78e-01 -0.00269 0.096 0.37 CD14_Mono LOneK1K
ENSG00000120837 NFYB -926682 sc-eQTL 2.67e-01 -0.0988 0.0888 0.37 CD14_Mono LOneK1K
ENSG00000139372 TDG -754263 sc-eQTL 9.48e-01 -0.00436 0.0666 0.37 CD14_Mono LOneK1K
ENSG00000166598 HSP90B1 -718548 sc-eQTL 3.92e-01 -0.0559 0.0652 0.37 CD14_Mono LOneK1K
ENSG00000204954 C12orf73 -754149 sc-eQTL 9.98e-01 0.000167 0.0831 0.37 CD14_Mono LOneK1K
ENSG00000111696 NT5DC3 -629675 sc-eQTL 7.21e-01 0.0338 0.0946 0.366 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -852972 sc-eQTL 4.39e-01 -0.0717 0.0924 0.366 CD16_Mono LOneK1K
ENSG00000120837 NFYB -926682 sc-eQTL 3.21e-01 -0.0902 0.0907 0.366 CD16_Mono LOneK1K
ENSG00000139372 TDG -754263 sc-eQTL 4.92e-01 0.0605 0.0879 0.366 CD16_Mono LOneK1K
ENSG00000166598 HSP90B1 -718548 sc-eQTL 4.76e-01 0.0627 0.0878 0.366 CD16_Mono LOneK1K
ENSG00000204954 C12orf73 -754149 sc-eQTL 8.84e-01 0.0132 0.0905 0.366 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -852972 sc-eQTL 1.17e-01 -0.14 0.0888 0.369 NK_CD56dim LOneK1K
ENSG00000120837 NFYB -926682 sc-eQTL 4.22e-01 -0.0633 0.0787 0.369 NK_CD56dim LOneK1K
ENSG00000139372 TDG -754263 sc-eQTL 6.24e-01 0.0381 0.0777 0.369 NK_CD56dim LOneK1K
ENSG00000166598 HSP90B1 -718548 sc-eQTL 7.44e-01 -0.0267 0.0817 0.369 NK_CD56dim LOneK1K
ENSG00000204954 C12orf73 -754149 sc-eQTL 4.91e-02 0.168 0.0851 0.369 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000120837 NFYB -926682 eQTL 0.0395 -0.0378 0.0183 0.00121 0.0 0.389
ENSG00000136011 STAB2 -375714 pQTL 0.0152 -0.0558 0.0229 0.0 0.0 0.387
ENSG00000214198 TTC41P -718652 eQTL 0.0242 0.089 0.0394 0.00127 0.0 0.389

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000214198 TTC41P -718652 3.27e-07 1.67e-07 6.57e-08 2.25e-07 1.05e-07 7.75e-08 2.5e-07 5.89e-08 1.85e-07 1.03e-07 1.86e-07 1.46e-07 2.45e-07 8.15e-08 5.97e-08 9.48e-08 5.57e-08 2.15e-07 7.42e-08 6.03e-08 1.23e-07 1.76e-07 1.69e-07 4.27e-08 2.37e-07 1.56e-07 1.31e-07 1.26e-07 1.34e-07 1.46e-07 1.26e-07 4.85e-08 4.16e-08 9.52e-08 4.41e-08 3.43e-08 5.1e-08 7.49e-08 6.45e-08 7.17e-08 5.1e-08 1.63e-07 3.19e-08 7.35e-09 3.71e-08 6.53e-09 7.12e-08 2.1e-09 4.83e-08