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Genes within 1Mb (chr12:103194788:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 713044 sc-eQTL 5.49e-01 0.0234 0.039 0.417 B L1
ENSG00000111696 NT5DC3 -646446 sc-eQTL 3.58e-01 -0.0787 0.0854 0.417 B L1
ENSG00000111727 HCFC2 -869743 sc-eQTL 4.95e-01 0.0545 0.0797 0.417 B L1
ENSG00000120837 NFYB -943453 sc-eQTL 5.84e-01 0.0422 0.0769 0.417 B L1
ENSG00000139372 TDG -771034 sc-eQTL 9.40e-01 -0.00583 0.0768 0.417 B L1
ENSG00000166598 HSP90B1 -735319 sc-eQTL 6.42e-01 0.0224 0.0482 0.417 B L1
ENSG00000179088 C12orf42 -301222 sc-eQTL 2.16e-01 0.0889 0.0717 0.417 B L1
ENSG00000204954 C12orf73 -770920 sc-eQTL 1.64e-01 0.115 0.0825 0.417 B L1
ENSG00000281344 HELLPAR 997203 sc-eQTL 7.38e-01 -0.0252 0.0752 0.417 B L1
ENSG00000111696 NT5DC3 -646446 sc-eQTL 6.64e-01 -0.0318 0.0731 0.417 CD4T L1
ENSG00000111727 HCFC2 -869743 sc-eQTL 5.11e-01 -0.0483 0.0734 0.417 CD4T L1
ENSG00000120837 NFYB -943453 sc-eQTL 8.38e-01 0.013 0.0631 0.417 CD4T L1
ENSG00000139372 TDG -771034 sc-eQTL 4.28e-01 -0.0516 0.0649 0.417 CD4T L1
ENSG00000166598 HSP90B1 -735319 sc-eQTL 9.05e-01 -0.0084 0.0703 0.417 CD4T L1
ENSG00000179088 C12orf42 -301222 sc-eQTL 4.67e-02 0.161 0.0803 0.417 CD4T L1
ENSG00000204954 C12orf73 -770920 sc-eQTL 8.44e-01 -0.0137 0.0698 0.417 CD4T L1
ENSG00000111696 NT5DC3 -646446 sc-eQTL 9.28e-01 0.00672 0.0746 0.417 CD8T L1
ENSG00000111727 HCFC2 -869743 sc-eQTL 5.81e-01 -0.0445 0.0805 0.417 CD8T L1
ENSG00000120837 NFYB -943453 sc-eQTL 5.85e-01 -0.0414 0.0756 0.417 CD8T L1
ENSG00000139372 TDG -771034 sc-eQTL 6.58e-01 0.0301 0.068 0.417 CD8T L1
ENSG00000166598 HSP90B1 -735319 sc-eQTL 2.46e-01 -0.0837 0.0719 0.417 CD8T L1
ENSG00000179088 C12orf42 -301222 sc-eQTL 2.88e-01 0.0927 0.0869 0.417 CD8T L1
ENSG00000204954 C12orf73 -770920 sc-eQTL 5.64e-01 0.0479 0.083 0.417 CD8T L1
ENSG00000111696 NT5DC3 -646446 sc-eQTL 7.26e-01 0.0319 0.0907 0.419 DC L1
ENSG00000111727 HCFC2 -869743 sc-eQTL 1.70e-01 -0.133 0.0968 0.419 DC L1
ENSG00000120837 NFYB -943453 sc-eQTL 6.71e-01 -0.0371 0.0871 0.419 DC L1
ENSG00000139372 TDG -771034 sc-eQTL 8.30e-01 -0.0192 0.089 0.419 DC L1
ENSG00000166598 HSP90B1 -735319 sc-eQTL 9.76e-01 0.00179 0.0585 0.419 DC L1
ENSG00000179088 C12orf42 -301222 sc-eQTL 9.62e-01 0.00368 0.0766 0.419 DC L1
ENSG00000204954 C12orf73 -770920 sc-eQTL 9.03e-01 0.0113 0.0922 0.419 DC L1
ENSG00000111696 NT5DC3 -646446 sc-eQTL 5.60e-01 0.0553 0.0949 0.417 Mono L1
ENSG00000111727 HCFC2 -869743 sc-eQTL 9.24e-01 -0.00836 0.0874 0.417 Mono L1
ENSG00000120837 NFYB -943453 sc-eQTL 3.09e-01 -0.0831 0.0816 0.417 Mono L1
ENSG00000139372 TDG -771034 sc-eQTL 7.25e-01 0.0221 0.0628 0.417 Mono L1
ENSG00000166598 HSP90B1 -735319 sc-eQTL 2.81e-01 -0.0677 0.0626 0.417 Mono L1
ENSG00000204954 C12orf73 -770920 sc-eQTL 7.29e-01 0.028 0.0807 0.417 Mono L1
ENSG00000111727 HCFC2 -869743 sc-eQTL 3.16e-01 -0.0832 0.0828 0.416 NK L1
ENSG00000120837 NFYB -943453 sc-eQTL 7.04e-01 -0.0291 0.0765 0.416 NK L1
ENSG00000139372 TDG -771034 sc-eQTL 9.59e-01 0.00369 0.0712 0.416 NK L1
ENSG00000166598 HSP90B1 -735319 sc-eQTL 1.89e-01 -0.103 0.0784 0.416 NK L1
ENSG00000204954 C12orf73 -770920 sc-eQTL 2.37e-01 0.0929 0.0784 0.416 NK L1
ENSG00000017427 IGF1 713044 sc-eQTL 5.83e-01 0.0162 0.0296 0.417 Other_T L1
ENSG00000111696 NT5DC3 -646446 sc-eQTL 4.20e-01 -0.0683 0.0845 0.417 Other_T L1
ENSG00000111727 HCFC2 -869743 sc-eQTL 5.86e-01 0.0471 0.0863 0.417 Other_T L1
ENSG00000120837 NFYB -943453 sc-eQTL 9.09e-01 0.00899 0.0783 0.417 Other_T L1
ENSG00000139372 TDG -771034 sc-eQTL 7.66e-01 -0.0224 0.0752 0.417 Other_T L1
ENSG00000166598 HSP90B1 -735319 sc-eQTL 1.09e-01 -0.109 0.0677 0.417 Other_T L1
ENSG00000179088 C12orf42 -301222 sc-eQTL 4.40e-01 0.066 0.0854 0.417 Other_T L1
ENSG00000204954 C12orf73 -770920 sc-eQTL 7.78e-02 0.155 0.0874 0.417 Other_T L1
ENSG00000281344 HELLPAR 997203 sc-eQTL 7.89e-01 0.0187 0.0698 0.417 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 713044 sc-eQTL 1.63e-01 0.0261 0.0186 0.421 B_Activated L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 5.76e-01 0.0487 0.0868 0.421 B_Activated L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 7.28e-01 -0.0332 0.0954 0.421 B_Activated L2
ENSG00000120837 NFYB -943453 sc-eQTL 3.86e-01 0.0893 0.103 0.421 B_Activated L2
ENSG00000139372 TDG -771034 sc-eQTL 1.99e-01 -0.132 0.102 0.421 B_Activated L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 4.14e-01 0.0908 0.111 0.421 B_Activated L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 8.09e-01 -0.0205 0.0848 0.421 B_Activated L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 8.59e-01 0.0166 0.0931 0.421 B_Activated L2
ENSG00000281344 HELLPAR 997203 sc-eQTL 7.99e-01 -0.0193 0.0756 0.421 B_Activated L2
ENSG00000017427 IGF1 713044 sc-eQTL 1.62e-01 0.0558 0.0398 0.414 B_Intermediate L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 3.56e-01 -0.083 0.0898 0.414 B_Intermediate L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 2.96e-01 -0.0982 0.0938 0.414 B_Intermediate L2
ENSG00000120837 NFYB -943453 sc-eQTL 3.13e-01 0.101 0.0998 0.414 B_Intermediate L2
ENSG00000139372 TDG -771034 sc-eQTL 6.86e-01 0.0407 0.101 0.414 B_Intermediate L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 2.10e-01 0.113 0.0897 0.414 B_Intermediate L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 5.93e-01 0.047 0.0879 0.414 B_Intermediate L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 3.51e-01 0.0888 0.095 0.414 B_Intermediate L2
ENSG00000281344 HELLPAR 997203 sc-eQTL 3.59e-02 -0.194 0.0917 0.414 B_Intermediate L2
ENSG00000017427 IGF1 713044 sc-eQTL 4.04e-01 0.03 0.0359 0.418 B_Memory L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 4.62e-01 0.0667 0.0905 0.418 B_Memory L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 5.97e-01 -0.0517 0.0976 0.418 B_Memory L2
ENSG00000120837 NFYB -943453 sc-eQTL 9.11e-01 -0.0108 0.0964 0.418 B_Memory L2
ENSG00000139372 TDG -771034 sc-eQTL 7.05e-01 -0.0373 0.0984 0.418 B_Memory L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 5.64e-01 0.0503 0.0869 0.418 B_Memory L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 2.20e-01 -0.11 0.0895 0.418 B_Memory L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 1.55e-01 0.136 0.0954 0.418 B_Memory L2
ENSG00000281344 HELLPAR 997203 sc-eQTL 8.71e-01 0.0135 0.0832 0.418 B_Memory L2
ENSG00000017427 IGF1 713044 sc-eQTL 8.85e-01 0.00717 0.0493 0.417 B_Naive1 L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 7.08e-01 -0.0328 0.0876 0.417 B_Naive1 L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 2.98e-02 0.208 0.095 0.417 B_Naive1 L2
ENSG00000120837 NFYB -943453 sc-eQTL 3.44e-01 -0.0865 0.0911 0.417 B_Naive1 L2
ENSG00000139372 TDG -771034 sc-eQTL 7.14e-01 0.031 0.0846 0.417 B_Naive1 L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 5.61e-01 0.042 0.0721 0.417 B_Naive1 L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 5.48e-01 -0.0562 0.0934 0.417 B_Naive1 L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 4.40e-01 -0.0714 0.0923 0.417 B_Naive1 L2
ENSG00000281344 HELLPAR 997203 sc-eQTL 5.79e-01 -0.049 0.0882 0.417 B_Naive1 L2
ENSG00000017427 IGF1 713044 sc-eQTL 8.76e-01 0.00678 0.0433 0.418 B_Naive2 L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 8.69e-01 0.0153 0.0928 0.418 B_Naive2 L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 3.53e-01 -0.091 0.0979 0.418 B_Naive2 L2
ENSG00000120837 NFYB -943453 sc-eQTL 5.18e-01 0.0616 0.0951 0.418 B_Naive2 L2
ENSG00000139372 TDG -771034 sc-eQTL 3.01e-01 -0.09 0.0867 0.418 B_Naive2 L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 2.85e-01 0.0945 0.088 0.418 B_Naive2 L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 1.58e-01 0.129 0.0913 0.418 B_Naive2 L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 2.87e-03 0.286 0.0947 0.418 B_Naive2 L2
ENSG00000281344 HELLPAR 997203 sc-eQTL 3.94e-01 0.0722 0.0845 0.418 B_Naive2 L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 1.56e-02 -0.203 0.0834 0.43 CD4_CTL L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 6.09e-01 0.0492 0.096 0.43 CD4_CTL L2
ENSG00000120837 NFYB -943453 sc-eQTL 5.59e-01 0.0559 0.0956 0.43 CD4_CTL L2
ENSG00000139372 TDG -771034 sc-eQTL 4.00e-02 0.206 0.0995 0.43 CD4_CTL L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 7.42e-01 -0.0281 0.0853 0.43 CD4_CTL L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 5.52e-01 0.0519 0.0872 0.43 CD4_CTL L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 9.25e-01 -0.00886 0.0944 0.43 CD4_CTL L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 7.26e-01 -0.0266 0.076 0.417 CD4_Naive L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 9.96e-01 0.000438 0.0791 0.417 CD4_Naive L2
ENSG00000120837 NFYB -943453 sc-eQTL 5.95e-01 -0.0362 0.0679 0.417 CD4_Naive L2
ENSG00000139372 TDG -771034 sc-eQTL 4.82e-01 -0.0483 0.0687 0.417 CD4_Naive L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 6.21e-01 -0.0347 0.0701 0.417 CD4_Naive L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 5.27e-02 0.163 0.0835 0.417 CD4_Naive L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 8.24e-01 0.017 0.0767 0.417 CD4_Naive L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 9.77e-01 0.0025 0.0883 0.417 CD4_TCM L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 1.97e-01 -0.121 0.0936 0.417 CD4_TCM L2
ENSG00000120837 NFYB -943453 sc-eQTL 3.51e-01 0.0786 0.0842 0.417 CD4_TCM L2
ENSG00000139372 TDG -771034 sc-eQTL 5.02e-01 -0.0514 0.0763 0.417 CD4_TCM L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 7.01e-01 0.0289 0.0752 0.417 CD4_TCM L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 3.18e-01 0.0871 0.0871 0.417 CD4_TCM L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 4.85e-01 0.0604 0.0863 0.417 CD4_TCM L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 5.70e-02 -0.177 0.0923 0.417 CD4_TEM L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 9.71e-01 0.00351 0.095 0.417 CD4_TEM L2
ENSG00000120837 NFYB -943453 sc-eQTL 1.07e-01 0.145 0.0899 0.417 CD4_TEM L2
ENSG00000139372 TDG -771034 sc-eQTL 5.41e-01 -0.0549 0.0896 0.417 CD4_TEM L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 5.84e-01 -0.0489 0.089 0.417 CD4_TEM L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 2.95e-01 0.0971 0.0925 0.417 CD4_TEM L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 3.77e-01 -0.0794 0.0897 0.417 CD4_TEM L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 4.43e-01 0.0637 0.0829 0.417 CD8_CTL L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 5.79e-01 -0.052 0.0935 0.417 CD8_CTL L2
ENSG00000120837 NFYB -943453 sc-eQTL 2.51e-01 -0.101 0.088 0.417 CD8_CTL L2
ENSG00000139372 TDG -771034 sc-eQTL 3.83e-01 0.0766 0.0877 0.417 CD8_CTL L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 1.24e-01 -0.118 0.0767 0.417 CD8_CTL L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 9.55e-01 0.00506 0.0906 0.417 CD8_CTL L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 3.34e-02 0.177 0.0827 0.417 CD8_CTL L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 2.57e-01 -0.0975 0.0857 0.417 CD8_Naive L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 8.50e-01 -0.0179 0.0944 0.417 CD8_Naive L2
ENSG00000120837 NFYB -943453 sc-eQTL 6.63e-01 -0.0381 0.0872 0.417 CD8_Naive L2
ENSG00000139372 TDG -771034 sc-eQTL 9.67e-01 0.00327 0.0784 0.417 CD8_Naive L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 1.50e-01 -0.107 0.0742 0.417 CD8_Naive L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 6.37e-01 0.0422 0.0892 0.417 CD8_Naive L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 3.74e-01 -0.0769 0.0864 0.417 CD8_Naive L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 8.23e-01 0.0191 0.0853 0.424 CD8_TCM L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 5.27e-01 0.0602 0.0949 0.424 CD8_TCM L2
ENSG00000120837 NFYB -943453 sc-eQTL 4.53e-01 0.0717 0.0955 0.424 CD8_TCM L2
ENSG00000139372 TDG -771034 sc-eQTL 7.73e-01 -0.0272 0.0942 0.424 CD8_TCM L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 6.55e-01 0.0402 0.0896 0.424 CD8_TCM L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 2.80e-01 0.095 0.0878 0.424 CD8_TCM L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 7.79e-01 0.0274 0.0975 0.424 CD8_TCM L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 1.55e-01 0.126 0.0883 0.422 CD8_TEM L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 7.96e-02 -0.169 0.0958 0.422 CD8_TEM L2
ENSG00000120837 NFYB -943453 sc-eQTL 2.88e-01 -0.0979 0.0919 0.422 CD8_TEM L2
ENSG00000139372 TDG -771034 sc-eQTL 1.58e-01 -0.139 0.0982 0.422 CD8_TEM L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 6.38e-01 -0.0433 0.0919 0.422 CD8_TEM L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 8.72e-01 0.0149 0.0924 0.422 CD8_TEM L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 2.88e-01 0.101 0.0944 0.422 CD8_TEM L2
ENSG00000017427 IGF1 713044 sc-eQTL 7.67e-01 -0.00951 0.0321 0.42 MAIT L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 1.36e-01 -0.133 0.0891 0.42 MAIT L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 7.75e-01 -0.0262 0.0918 0.42 MAIT L2
ENSG00000120837 NFYB -943453 sc-eQTL 9.60e-01 -0.00449 0.0892 0.42 MAIT L2
ENSG00000139372 TDG -771034 sc-eQTL 2.34e-01 0.115 0.0962 0.42 MAIT L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 6.29e-02 -0.174 0.0929 0.42 MAIT L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 1.86e-01 0.111 0.0837 0.42 MAIT L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 4.17e-02 0.192 0.0935 0.42 MAIT L2
ENSG00000281344 HELLPAR 997203 sc-eQTL 6.72e-01 -0.033 0.0778 0.42 MAIT L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 8.20e-01 0.0208 0.0912 0.42 NK_CD56bright L2
ENSG00000120837 NFYB -943453 sc-eQTL 7.35e-01 -0.0313 0.0924 0.42 NK_CD56bright L2
ENSG00000139372 TDG -771034 sc-eQTL 4.15e-01 -0.0767 0.0938 0.42 NK_CD56bright L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 3.72e-01 -0.0829 0.0926 0.42 NK_CD56bright L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 5.94e-01 -0.0525 0.0982 0.42 NK_CD56bright L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 4.07e-01 -0.0764 0.0919 0.416 NK_CD56dim L2
ENSG00000120837 NFYB -943453 sc-eQTL 8.91e-01 -0.0113 0.0822 0.416 NK_CD56dim L2
ENSG00000139372 TDG -771034 sc-eQTL 8.50e-01 -0.0148 0.078 0.416 NK_CD56dim L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 9.60e-02 -0.13 0.0776 0.416 NK_CD56dim L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 5.70e-02 0.17 0.0888 0.416 NK_CD56dim L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 4.60e-01 -0.0714 0.0966 0.422 NK_HLA L2
ENSG00000120837 NFYB -943453 sc-eQTL 4.87e-01 0.0683 0.0981 0.422 NK_HLA L2
ENSG00000139372 TDG -771034 sc-eQTL 8.83e-01 0.0143 0.097 0.422 NK_HLA L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 8.37e-02 -0.164 0.0945 0.422 NK_HLA L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 4.89e-01 -0.061 0.088 0.422 NK_HLA L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 6.69e-01 -0.0405 0.0948 0.416 NK_cytokine L2
ENSG00000120837 NFYB -943453 sc-eQTL 2.76e-01 -0.0896 0.082 0.416 NK_cytokine L2
ENSG00000139372 TDG -771034 sc-eQTL 9.50e-01 -0.0053 0.084 0.416 NK_cytokine L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 7.99e-01 -0.0213 0.0835 0.416 NK_cytokine L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 5.30e-01 0.0548 0.0872 0.416 NK_cytokine L2
ENSG00000017427 IGF1 713044 sc-eQTL 1.93e-02 0.168 0.0708 0.381 PB L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 6.08e-01 -0.0586 0.114 0.381 PB L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 4.53e-01 -0.0731 0.0972 0.381 PB L2
ENSG00000120837 NFYB -943453 sc-eQTL 1.64e-01 0.158 0.113 0.381 PB L2
ENSG00000139372 TDG -771034 sc-eQTL 1.40e-01 -0.171 0.115 0.381 PB L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 2.74e-01 0.0584 0.0531 0.381 PB L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 9.34e-01 -0.00779 0.0934 0.381 PB L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 9.45e-01 0.00803 0.116 0.381 PB L2
ENSG00000281344 HELLPAR 997203 sc-eQTL 4.56e-03 0.248 0.0855 0.381 PB L2
ENSG00000017427 IGF1 713044 sc-eQTL 3.02e-01 0.0332 0.0321 0.417 Pro_T L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 7.94e-01 0.021 0.0806 0.417 Pro_T L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 6.47e-01 0.0402 0.0876 0.417 Pro_T L2
ENSG00000120837 NFYB -943453 sc-eQTL 2.41e-01 -0.106 0.0903 0.417 Pro_T L2
ENSG00000139372 TDG -771034 sc-eQTL 6.44e-01 0.0397 0.0858 0.417 Pro_T L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 9.08e-01 0.00692 0.0601 0.417 Pro_T L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 9.95e-01 -0.000469 0.0824 0.417 Pro_T L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 3.88e-01 0.0732 0.0846 0.417 Pro_T L2
ENSG00000281344 HELLPAR 997203 sc-eQTL 8.29e-01 0.014 0.0649 0.417 Pro_T L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 1.66e-01 0.119 0.0858 0.417 Treg L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 3.24e-01 -0.0974 0.0986 0.417 Treg L2
ENSG00000120837 NFYB -943453 sc-eQTL 9.90e-01 0.00111 0.0877 0.417 Treg L2
ENSG00000139372 TDG -771034 sc-eQTL 1.13e-01 -0.153 0.0964 0.417 Treg L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 9.13e-01 -0.00983 0.0897 0.417 Treg L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 7.38e-01 0.0257 0.0769 0.417 Treg L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 1.05e-01 -0.157 0.0962 0.417 Treg L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 7.48e-01 0.0332 0.103 0.422 cDC L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 3.03e-01 -0.093 0.09 0.422 cDC L2
ENSG00000120837 NFYB -943453 sc-eQTL 4.56e-01 -0.0721 0.0965 0.422 cDC L2
ENSG00000139372 TDG -771034 sc-eQTL 8.03e-01 -0.0247 0.0993 0.422 cDC L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 4.12e-01 -0.0723 0.0879 0.422 cDC L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 6.58e-01 0.029 0.0656 0.422 cDC L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 5.79e-01 0.0509 0.0916 0.422 cDC L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 4.27e-01 0.071 0.0891 0.417 cMono_IL1B L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 9.68e-01 -0.00369 0.091 0.417 cMono_IL1B L2
ENSG00000120837 NFYB -943453 sc-eQTL 4.19e-01 -0.075 0.0925 0.417 cMono_IL1B L2
ENSG00000139372 TDG -771034 sc-eQTL 4.22e-01 -0.0571 0.071 0.417 cMono_IL1B L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 7.54e-02 -0.122 0.0683 0.417 cMono_IL1B L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 7.73e-01 0.0239 0.0825 0.417 cMono_IL1B L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 9.91e-01 0.000998 0.0911 0.417 cMono_S100A L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 4.99e-01 -0.0644 0.0949 0.417 cMono_S100A L2
ENSG00000120837 NFYB -943453 sc-eQTL 9.24e-01 -0.00843 0.0883 0.417 cMono_S100A L2
ENSG00000139372 TDG -771034 sc-eQTL 3.16e-01 0.0814 0.081 0.417 cMono_S100A L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 1.10e-01 -0.114 0.071 0.417 cMono_S100A L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 6.09e-01 0.0461 0.0901 0.417 cMono_S100A L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 7.03e-01 -0.0391 0.102 0.461 gdT L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 3.49e-01 0.099 0.105 0.461 gdT L2
ENSG00000120837 NFYB -943453 sc-eQTL 3.42e-01 -0.0961 0.101 0.461 gdT L2
ENSG00000139372 TDG -771034 sc-eQTL 5.64e-01 -0.0589 0.102 0.461 gdT L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 7.43e-03 -0.285 0.105 0.461 gdT L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 1.85e-01 -0.134 0.1 0.461 gdT L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 2.03e-01 0.131 0.102 0.461 gdT L2
ENSG00000281344 HELLPAR 997203 sc-eQTL 2.93e-01 0.0971 0.092 0.461 gdT L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 7.81e-01 0.0247 0.0888 0.418 intMono L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 3.30e-01 -0.0916 0.0938 0.418 intMono L2
ENSG00000120837 NFYB -943453 sc-eQTL 2.78e-01 0.106 0.098 0.418 intMono L2
ENSG00000139372 TDG -771034 sc-eQTL 8.12e-01 0.0218 0.0918 0.418 intMono L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 9.50e-01 0.00519 0.082 0.418 intMono L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 4.67e-01 -0.0611 0.0839 0.418 intMono L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 3.89e-01 0.079 0.0915 0.419 ncMono L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 3.29e-01 -0.0897 0.0916 0.419 ncMono L2
ENSG00000120837 NFYB -943453 sc-eQTL 4.64e-01 -0.0678 0.0925 0.419 ncMono L2
ENSG00000139372 TDG -771034 sc-eQTL 3.11e-01 0.091 0.0896 0.419 ncMono L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 3.97e-01 -0.0676 0.0797 0.419 ncMono L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 6.21e-01 0.0447 0.0902 0.419 ncMono L2
ENSG00000111696 NT5DC3 -646446 sc-eQTL 9.19e-01 -0.0092 0.0907 0.418 pDC L2
ENSG00000111727 HCFC2 -869743 sc-eQTL 3.58e-02 -0.214 0.101 0.418 pDC L2
ENSG00000120837 NFYB -943453 sc-eQTL 6.24e-01 0.0525 0.107 0.418 pDC L2
ENSG00000139372 TDG -771034 sc-eQTL 7.90e-01 0.0243 0.0912 0.418 pDC L2
ENSG00000166598 HSP90B1 -735319 sc-eQTL 7.10e-01 0.0265 0.0713 0.418 pDC L2
ENSG00000179088 C12orf42 -301222 sc-eQTL 6.84e-01 0.0379 0.0929 0.418 pDC L2
ENSG00000204954 C12orf73 -770920 sc-eQTL 8.23e-01 -0.0199 0.0887 0.418 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 713044 sc-eQTL 8.52e-02 0.0785 0.0454 0.417 B_Memory LOneK1K
ENSG00000111696 NT5DC3 -646446 sc-eQTL 3.76e-01 -0.0792 0.0893 0.417 B_Memory LOneK1K
ENSG00000111727 HCFC2 -869743 sc-eQTL 1.41e-01 -0.142 0.0957 0.417 B_Memory LOneK1K
ENSG00000120837 NFYB -943453 sc-eQTL 3.03e-01 0.0907 0.0879 0.417 B_Memory LOneK1K
ENSG00000139372 TDG -771034 sc-eQTL 7.11e-01 -0.0346 0.0932 0.417 B_Memory LOneK1K
ENSG00000166598 HSP90B1 -735319 sc-eQTL 2.12e-01 0.104 0.0831 0.417 B_Memory LOneK1K
ENSG00000179088 C12orf42 -301222 sc-eQTL 9.55e-01 -0.004 0.0714 0.417 B_Memory LOneK1K
ENSG00000204954 C12orf73 -770920 sc-eQTL 2.91e-01 0.102 0.0966 0.417 B_Memory LOneK1K
ENSG00000281344 HELLPAR 997203 sc-eQTL 3.09e-01 -0.0962 0.0944 0.417 B_Memory LOneK1K
ENSG00000017427 IGF1 713044 sc-eQTL 7.90e-01 0.0139 0.0522 0.417 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -646446 sc-eQTL 7.33e-01 -0.0301 0.088 0.417 B_Naive LOneK1K
ENSG00000111727 HCFC2 -869743 sc-eQTL 1.35e-01 0.142 0.0945 0.417 B_Naive LOneK1K
ENSG00000120837 NFYB -943453 sc-eQTL 5.01e-01 -0.0584 0.0866 0.417 B_Naive LOneK1K
ENSG00000139372 TDG -771034 sc-eQTL 6.31e-01 0.0389 0.0808 0.417 B_Naive LOneK1K
ENSG00000166598 HSP90B1 -735319 sc-eQTL 3.67e-01 0.0668 0.0738 0.417 B_Naive LOneK1K
ENSG00000179088 C12orf42 -301222 sc-eQTL 5.73e-01 0.0512 0.0907 0.417 B_Naive LOneK1K
ENSG00000204954 C12orf73 -770920 sc-eQTL 2.65e-01 0.105 0.0939 0.417 B_Naive LOneK1K
ENSG00000281344 HELLPAR 997203 sc-eQTL 8.19e-01 0.0203 0.0885 0.417 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -646446 sc-eQTL 4.94e-01 0.0631 0.0922 0.417 CD14_Mono LOneK1K
ENSG00000111727 HCFC2 -869743 sc-eQTL 8.59e-01 -0.0168 0.0944 0.417 CD14_Mono LOneK1K
ENSG00000120837 NFYB -943453 sc-eQTL 3.19e-01 -0.0871 0.0873 0.417 CD14_Mono LOneK1K
ENSG00000139372 TDG -771034 sc-eQTL 7.94e-01 0.0171 0.0654 0.417 CD14_Mono LOneK1K
ENSG00000166598 HSP90B1 -735319 sc-eQTL 1.30e-01 -0.097 0.0639 0.417 CD14_Mono LOneK1K
ENSG00000204954 C12orf73 -770920 sc-eQTL 5.55e-01 0.0483 0.0816 0.417 CD14_Mono LOneK1K
ENSG00000111696 NT5DC3 -646446 sc-eQTL 2.78e-01 0.101 0.0925 0.414 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -869743 sc-eQTL 4.13e-01 -0.0743 0.0906 0.414 CD16_Mono LOneK1K
ENSG00000120837 NFYB -943453 sc-eQTL 2.85e-01 -0.0952 0.0889 0.414 CD16_Mono LOneK1K
ENSG00000139372 TDG -771034 sc-eQTL 5.25e-01 0.0549 0.0862 0.414 CD16_Mono LOneK1K
ENSG00000166598 HSP90B1 -735319 sc-eQTL 9.11e-01 -0.00965 0.0861 0.414 CD16_Mono LOneK1K
ENSG00000204954 C12orf73 -770920 sc-eQTL 9.49e-01 -0.00565 0.0888 0.414 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -869743 sc-eQTL 2.64e-01 -0.096 0.0857 0.416 NK_CD56dim LOneK1K
ENSG00000120837 NFYB -943453 sc-eQTL 8.72e-01 -0.0122 0.0758 0.416 NK_CD56dim LOneK1K
ENSG00000139372 TDG -771034 sc-eQTL 6.93e-01 0.0295 0.0747 0.416 NK_CD56dim LOneK1K
ENSG00000166598 HSP90B1 -735319 sc-eQTL 1.74e-01 -0.107 0.0783 0.416 NK_CD56dim LOneK1K
ENSG00000204954 C12orf73 -770920 sc-eQTL 2.50e-01 0.095 0.0823 0.416 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136011 STAB2 -392485 pQTL 0.0116 -0.056 0.0222 0.0 0.0 0.436
ENSG00000214198 TTC41P -735423 eQTL 0.0159 0.0921 0.0382 0.00144 0.0 0.439

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000214198 TTC41P -735423 3.21e-07 1.56e-07 6.45e-08 2.15e-07 1.01e-07 8.63e-08 2.24e-07 6.2e-08 1.89e-07 1.05e-07 1.83e-07 1.46e-07 2.38e-07 8.07e-08 5.62e-08 9.35e-08 5.27e-08 2.04e-07 7.36e-08 5.87e-08 1.24e-07 1.81e-07 1.69e-07 3.59e-08 2.17e-07 1.71e-07 1.29e-07 1.17e-07 1.37e-07 1.17e-07 1.26e-07 3.66e-08 3.46e-08 9.5e-08 3.36e-08 3.18e-08 4.06e-08 8.57e-08 6.62e-08 5.35e-08 6e-08 1.55e-07 4.76e-08 1.3e-08 3.29e-08 1.19e-08 7.83e-08 1.95e-09 4.94e-08