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Genes within 1Mb (chr12:103193163:T:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 711419 sc-eQTL 5.49e-01 0.0234 0.039 0.417 B L1
ENSG00000111696 NT5DC3 -648071 sc-eQTL 3.58e-01 -0.0787 0.0854 0.417 B L1
ENSG00000111727 HCFC2 -871368 sc-eQTL 4.95e-01 0.0545 0.0797 0.417 B L1
ENSG00000120837 NFYB -945078 sc-eQTL 5.84e-01 0.0422 0.0769 0.417 B L1
ENSG00000139372 TDG -772659 sc-eQTL 9.40e-01 -0.00583 0.0768 0.417 B L1
ENSG00000166598 HSP90B1 -736944 sc-eQTL 6.42e-01 0.0224 0.0482 0.417 B L1
ENSG00000179088 C12orf42 -302847 sc-eQTL 2.16e-01 0.0889 0.0717 0.417 B L1
ENSG00000204954 C12orf73 -772545 sc-eQTL 1.64e-01 0.115 0.0825 0.417 B L1
ENSG00000281344 HELLPAR 995578 sc-eQTL 7.38e-01 -0.0252 0.0752 0.417 B L1
ENSG00000111696 NT5DC3 -648071 sc-eQTL 6.64e-01 -0.0318 0.0731 0.417 CD4T L1
ENSG00000111727 HCFC2 -871368 sc-eQTL 5.11e-01 -0.0483 0.0734 0.417 CD4T L1
ENSG00000120837 NFYB -945078 sc-eQTL 8.38e-01 0.013 0.0631 0.417 CD4T L1
ENSG00000139372 TDG -772659 sc-eQTL 4.28e-01 -0.0516 0.0649 0.417 CD4T L1
ENSG00000166598 HSP90B1 -736944 sc-eQTL 9.05e-01 -0.0084 0.0703 0.417 CD4T L1
ENSG00000179088 C12orf42 -302847 sc-eQTL 4.67e-02 0.161 0.0803 0.417 CD4T L1
ENSG00000204954 C12orf73 -772545 sc-eQTL 8.44e-01 -0.0137 0.0698 0.417 CD4T L1
ENSG00000111696 NT5DC3 -648071 sc-eQTL 9.28e-01 0.00672 0.0746 0.417 CD8T L1
ENSG00000111727 HCFC2 -871368 sc-eQTL 5.81e-01 -0.0445 0.0805 0.417 CD8T L1
ENSG00000120837 NFYB -945078 sc-eQTL 5.85e-01 -0.0414 0.0756 0.417 CD8T L1
ENSG00000139372 TDG -772659 sc-eQTL 6.58e-01 0.0301 0.068 0.417 CD8T L1
ENSG00000166598 HSP90B1 -736944 sc-eQTL 2.46e-01 -0.0837 0.0719 0.417 CD8T L1
ENSG00000179088 C12orf42 -302847 sc-eQTL 2.88e-01 0.0927 0.0869 0.417 CD8T L1
ENSG00000204954 C12orf73 -772545 sc-eQTL 5.64e-01 0.0479 0.083 0.417 CD8T L1
ENSG00000111696 NT5DC3 -648071 sc-eQTL 7.26e-01 0.0319 0.0907 0.419 DC L1
ENSG00000111727 HCFC2 -871368 sc-eQTL 1.70e-01 -0.133 0.0968 0.419 DC L1
ENSG00000120837 NFYB -945078 sc-eQTL 6.71e-01 -0.0371 0.0871 0.419 DC L1
ENSG00000139372 TDG -772659 sc-eQTL 8.30e-01 -0.0192 0.089 0.419 DC L1
ENSG00000166598 HSP90B1 -736944 sc-eQTL 9.76e-01 0.00179 0.0585 0.419 DC L1
ENSG00000179088 C12orf42 -302847 sc-eQTL 9.62e-01 0.00368 0.0766 0.419 DC L1
ENSG00000204954 C12orf73 -772545 sc-eQTL 9.03e-01 0.0113 0.0922 0.419 DC L1
ENSG00000111696 NT5DC3 -648071 sc-eQTL 5.60e-01 0.0553 0.0949 0.417 Mono L1
ENSG00000111727 HCFC2 -871368 sc-eQTL 9.24e-01 -0.00836 0.0874 0.417 Mono L1
ENSG00000120837 NFYB -945078 sc-eQTL 3.09e-01 -0.0831 0.0816 0.417 Mono L1
ENSG00000139372 TDG -772659 sc-eQTL 7.25e-01 0.0221 0.0628 0.417 Mono L1
ENSG00000166598 HSP90B1 -736944 sc-eQTL 2.81e-01 -0.0677 0.0626 0.417 Mono L1
ENSG00000204954 C12orf73 -772545 sc-eQTL 7.29e-01 0.028 0.0807 0.417 Mono L1
ENSG00000111727 HCFC2 -871368 sc-eQTL 3.16e-01 -0.0832 0.0828 0.416 NK L1
ENSG00000120837 NFYB -945078 sc-eQTL 7.04e-01 -0.0291 0.0765 0.416 NK L1
ENSG00000139372 TDG -772659 sc-eQTL 9.59e-01 0.00369 0.0712 0.416 NK L1
ENSG00000166598 HSP90B1 -736944 sc-eQTL 1.89e-01 -0.103 0.0784 0.416 NK L1
ENSG00000204954 C12orf73 -772545 sc-eQTL 2.37e-01 0.0929 0.0784 0.416 NK L1
ENSG00000017427 IGF1 711419 sc-eQTL 5.83e-01 0.0162 0.0296 0.417 Other_T L1
ENSG00000111696 NT5DC3 -648071 sc-eQTL 4.20e-01 -0.0683 0.0845 0.417 Other_T L1
ENSG00000111727 HCFC2 -871368 sc-eQTL 5.86e-01 0.0471 0.0863 0.417 Other_T L1
ENSG00000120837 NFYB -945078 sc-eQTL 9.09e-01 0.00899 0.0783 0.417 Other_T L1
ENSG00000139372 TDG -772659 sc-eQTL 7.66e-01 -0.0224 0.0752 0.417 Other_T L1
ENSG00000166598 HSP90B1 -736944 sc-eQTL 1.09e-01 -0.109 0.0677 0.417 Other_T L1
ENSG00000179088 C12orf42 -302847 sc-eQTL 4.40e-01 0.066 0.0854 0.417 Other_T L1
ENSG00000204954 C12orf73 -772545 sc-eQTL 7.78e-02 0.155 0.0874 0.417 Other_T L1
ENSG00000281344 HELLPAR 995578 sc-eQTL 7.89e-01 0.0187 0.0698 0.417 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 711419 sc-eQTL 1.63e-01 0.0261 0.0186 0.421 B_Activated L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 5.76e-01 0.0487 0.0868 0.421 B_Activated L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 7.28e-01 -0.0332 0.0954 0.421 B_Activated L2
ENSG00000120837 NFYB -945078 sc-eQTL 3.86e-01 0.0893 0.103 0.421 B_Activated L2
ENSG00000139372 TDG -772659 sc-eQTL 1.99e-01 -0.132 0.102 0.421 B_Activated L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 4.14e-01 0.0908 0.111 0.421 B_Activated L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 8.09e-01 -0.0205 0.0848 0.421 B_Activated L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 8.59e-01 0.0166 0.0931 0.421 B_Activated L2
ENSG00000281344 HELLPAR 995578 sc-eQTL 7.99e-01 -0.0193 0.0756 0.421 B_Activated L2
ENSG00000017427 IGF1 711419 sc-eQTL 1.62e-01 0.0558 0.0398 0.414 B_Intermediate L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 3.56e-01 -0.083 0.0898 0.414 B_Intermediate L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 2.96e-01 -0.0982 0.0938 0.414 B_Intermediate L2
ENSG00000120837 NFYB -945078 sc-eQTL 3.13e-01 0.101 0.0998 0.414 B_Intermediate L2
ENSG00000139372 TDG -772659 sc-eQTL 6.86e-01 0.0407 0.101 0.414 B_Intermediate L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 2.10e-01 0.113 0.0897 0.414 B_Intermediate L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 5.93e-01 0.047 0.0879 0.414 B_Intermediate L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 3.51e-01 0.0888 0.095 0.414 B_Intermediate L2
ENSG00000281344 HELLPAR 995578 sc-eQTL 3.59e-02 -0.194 0.0917 0.414 B_Intermediate L2
ENSG00000017427 IGF1 711419 sc-eQTL 4.04e-01 0.03 0.0359 0.418 B_Memory L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 4.62e-01 0.0667 0.0905 0.418 B_Memory L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 5.97e-01 -0.0517 0.0976 0.418 B_Memory L2
ENSG00000120837 NFYB -945078 sc-eQTL 9.11e-01 -0.0108 0.0964 0.418 B_Memory L2
ENSG00000139372 TDG -772659 sc-eQTL 7.05e-01 -0.0373 0.0984 0.418 B_Memory L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 5.64e-01 0.0503 0.0869 0.418 B_Memory L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 2.20e-01 -0.11 0.0895 0.418 B_Memory L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 1.55e-01 0.136 0.0954 0.418 B_Memory L2
ENSG00000281344 HELLPAR 995578 sc-eQTL 8.71e-01 0.0135 0.0832 0.418 B_Memory L2
ENSG00000017427 IGF1 711419 sc-eQTL 8.85e-01 0.00717 0.0493 0.417 B_Naive1 L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 7.08e-01 -0.0328 0.0876 0.417 B_Naive1 L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 2.98e-02 0.208 0.095 0.417 B_Naive1 L2
ENSG00000120837 NFYB -945078 sc-eQTL 3.44e-01 -0.0865 0.0911 0.417 B_Naive1 L2
ENSG00000139372 TDG -772659 sc-eQTL 7.14e-01 0.031 0.0846 0.417 B_Naive1 L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 5.61e-01 0.042 0.0721 0.417 B_Naive1 L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 5.48e-01 -0.0562 0.0934 0.417 B_Naive1 L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 4.40e-01 -0.0714 0.0923 0.417 B_Naive1 L2
ENSG00000281344 HELLPAR 995578 sc-eQTL 5.79e-01 -0.049 0.0882 0.417 B_Naive1 L2
ENSG00000017427 IGF1 711419 sc-eQTL 8.76e-01 0.00678 0.0433 0.418 B_Naive2 L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 8.69e-01 0.0153 0.0928 0.418 B_Naive2 L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 3.53e-01 -0.091 0.0979 0.418 B_Naive2 L2
ENSG00000120837 NFYB -945078 sc-eQTL 5.18e-01 0.0616 0.0951 0.418 B_Naive2 L2
ENSG00000139372 TDG -772659 sc-eQTL 3.01e-01 -0.09 0.0867 0.418 B_Naive2 L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 2.85e-01 0.0945 0.088 0.418 B_Naive2 L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 1.58e-01 0.129 0.0913 0.418 B_Naive2 L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 2.87e-03 0.286 0.0947 0.418 B_Naive2 L2
ENSG00000281344 HELLPAR 995578 sc-eQTL 3.94e-01 0.0722 0.0845 0.418 B_Naive2 L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 1.56e-02 -0.203 0.0834 0.43 CD4_CTL L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 6.09e-01 0.0492 0.096 0.43 CD4_CTL L2
ENSG00000120837 NFYB -945078 sc-eQTL 5.59e-01 0.0559 0.0956 0.43 CD4_CTL L2
ENSG00000139372 TDG -772659 sc-eQTL 4.00e-02 0.206 0.0995 0.43 CD4_CTL L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 7.42e-01 -0.0281 0.0853 0.43 CD4_CTL L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 5.52e-01 0.0519 0.0872 0.43 CD4_CTL L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 9.25e-01 -0.00886 0.0944 0.43 CD4_CTL L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 7.26e-01 -0.0266 0.076 0.417 CD4_Naive L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 9.96e-01 0.000438 0.0791 0.417 CD4_Naive L2
ENSG00000120837 NFYB -945078 sc-eQTL 5.95e-01 -0.0362 0.0679 0.417 CD4_Naive L2
ENSG00000139372 TDG -772659 sc-eQTL 4.82e-01 -0.0483 0.0687 0.417 CD4_Naive L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 6.21e-01 -0.0347 0.0701 0.417 CD4_Naive L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 5.27e-02 0.163 0.0835 0.417 CD4_Naive L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 8.24e-01 0.017 0.0767 0.417 CD4_Naive L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 9.77e-01 0.0025 0.0883 0.417 CD4_TCM L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 1.97e-01 -0.121 0.0936 0.417 CD4_TCM L2
ENSG00000120837 NFYB -945078 sc-eQTL 3.51e-01 0.0786 0.0842 0.417 CD4_TCM L2
ENSG00000139372 TDG -772659 sc-eQTL 5.02e-01 -0.0514 0.0763 0.417 CD4_TCM L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 7.01e-01 0.0289 0.0752 0.417 CD4_TCM L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 3.18e-01 0.0871 0.0871 0.417 CD4_TCM L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 4.85e-01 0.0604 0.0863 0.417 CD4_TCM L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 5.70e-02 -0.177 0.0923 0.417 CD4_TEM L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 9.71e-01 0.00351 0.095 0.417 CD4_TEM L2
ENSG00000120837 NFYB -945078 sc-eQTL 1.07e-01 0.145 0.0899 0.417 CD4_TEM L2
ENSG00000139372 TDG -772659 sc-eQTL 5.41e-01 -0.0549 0.0896 0.417 CD4_TEM L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 5.84e-01 -0.0489 0.089 0.417 CD4_TEM L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 2.95e-01 0.0971 0.0925 0.417 CD4_TEM L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 3.77e-01 -0.0794 0.0897 0.417 CD4_TEM L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 4.43e-01 0.0637 0.0829 0.417 CD8_CTL L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 5.79e-01 -0.052 0.0935 0.417 CD8_CTL L2
ENSG00000120837 NFYB -945078 sc-eQTL 2.51e-01 -0.101 0.088 0.417 CD8_CTL L2
ENSG00000139372 TDG -772659 sc-eQTL 3.83e-01 0.0766 0.0877 0.417 CD8_CTL L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 1.24e-01 -0.118 0.0767 0.417 CD8_CTL L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 9.55e-01 0.00506 0.0906 0.417 CD8_CTL L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 3.34e-02 0.177 0.0827 0.417 CD8_CTL L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 2.57e-01 -0.0975 0.0857 0.417 CD8_Naive L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 8.50e-01 -0.0179 0.0944 0.417 CD8_Naive L2
ENSG00000120837 NFYB -945078 sc-eQTL 6.63e-01 -0.0381 0.0872 0.417 CD8_Naive L2
ENSG00000139372 TDG -772659 sc-eQTL 9.67e-01 0.00327 0.0784 0.417 CD8_Naive L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 1.50e-01 -0.107 0.0742 0.417 CD8_Naive L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 6.37e-01 0.0422 0.0892 0.417 CD8_Naive L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 3.74e-01 -0.0769 0.0864 0.417 CD8_Naive L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 8.23e-01 0.0191 0.0853 0.424 CD8_TCM L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 5.27e-01 0.0602 0.0949 0.424 CD8_TCM L2
ENSG00000120837 NFYB -945078 sc-eQTL 4.53e-01 0.0717 0.0955 0.424 CD8_TCM L2
ENSG00000139372 TDG -772659 sc-eQTL 7.73e-01 -0.0272 0.0942 0.424 CD8_TCM L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 6.55e-01 0.0402 0.0896 0.424 CD8_TCM L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 2.80e-01 0.095 0.0878 0.424 CD8_TCM L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 7.79e-01 0.0274 0.0975 0.424 CD8_TCM L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 1.55e-01 0.126 0.0883 0.422 CD8_TEM L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 7.96e-02 -0.169 0.0958 0.422 CD8_TEM L2
ENSG00000120837 NFYB -945078 sc-eQTL 2.88e-01 -0.0979 0.0919 0.422 CD8_TEM L2
ENSG00000139372 TDG -772659 sc-eQTL 1.58e-01 -0.139 0.0982 0.422 CD8_TEM L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 6.38e-01 -0.0433 0.0919 0.422 CD8_TEM L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 8.72e-01 0.0149 0.0924 0.422 CD8_TEM L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 2.88e-01 0.101 0.0944 0.422 CD8_TEM L2
ENSG00000017427 IGF1 711419 sc-eQTL 7.67e-01 -0.00951 0.0321 0.42 MAIT L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 1.36e-01 -0.133 0.0891 0.42 MAIT L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 7.75e-01 -0.0262 0.0918 0.42 MAIT L2
ENSG00000120837 NFYB -945078 sc-eQTL 9.60e-01 -0.00449 0.0892 0.42 MAIT L2
ENSG00000139372 TDG -772659 sc-eQTL 2.34e-01 0.115 0.0962 0.42 MAIT L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 6.29e-02 -0.174 0.0929 0.42 MAIT L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 1.86e-01 0.111 0.0837 0.42 MAIT L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 4.17e-02 0.192 0.0935 0.42 MAIT L2
ENSG00000281344 HELLPAR 995578 sc-eQTL 6.72e-01 -0.033 0.0778 0.42 MAIT L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 8.20e-01 0.0208 0.0912 0.42 NK_CD56bright L2
ENSG00000120837 NFYB -945078 sc-eQTL 7.35e-01 -0.0313 0.0924 0.42 NK_CD56bright L2
ENSG00000139372 TDG -772659 sc-eQTL 4.15e-01 -0.0767 0.0938 0.42 NK_CD56bright L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 3.72e-01 -0.0829 0.0926 0.42 NK_CD56bright L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 5.94e-01 -0.0525 0.0982 0.42 NK_CD56bright L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 4.07e-01 -0.0764 0.0919 0.416 NK_CD56dim L2
ENSG00000120837 NFYB -945078 sc-eQTL 8.91e-01 -0.0113 0.0822 0.416 NK_CD56dim L2
ENSG00000139372 TDG -772659 sc-eQTL 8.50e-01 -0.0148 0.078 0.416 NK_CD56dim L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 9.60e-02 -0.13 0.0776 0.416 NK_CD56dim L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 5.70e-02 0.17 0.0888 0.416 NK_CD56dim L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 4.60e-01 -0.0714 0.0966 0.422 NK_HLA L2
ENSG00000120837 NFYB -945078 sc-eQTL 4.87e-01 0.0683 0.0981 0.422 NK_HLA L2
ENSG00000139372 TDG -772659 sc-eQTL 8.83e-01 0.0143 0.097 0.422 NK_HLA L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 8.37e-02 -0.164 0.0945 0.422 NK_HLA L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 4.89e-01 -0.061 0.088 0.422 NK_HLA L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 6.69e-01 -0.0405 0.0948 0.416 NK_cytokine L2
ENSG00000120837 NFYB -945078 sc-eQTL 2.76e-01 -0.0896 0.082 0.416 NK_cytokine L2
ENSG00000139372 TDG -772659 sc-eQTL 9.50e-01 -0.0053 0.084 0.416 NK_cytokine L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 7.99e-01 -0.0213 0.0835 0.416 NK_cytokine L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 5.30e-01 0.0548 0.0872 0.416 NK_cytokine L2
ENSG00000017427 IGF1 711419 sc-eQTL 1.93e-02 0.168 0.0708 0.381 PB L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 6.08e-01 -0.0586 0.114 0.381 PB L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 4.53e-01 -0.0731 0.0972 0.381 PB L2
ENSG00000120837 NFYB -945078 sc-eQTL 1.64e-01 0.158 0.113 0.381 PB L2
ENSG00000139372 TDG -772659 sc-eQTL 1.40e-01 -0.171 0.115 0.381 PB L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 2.74e-01 0.0584 0.0531 0.381 PB L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 9.34e-01 -0.00779 0.0934 0.381 PB L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 9.45e-01 0.00803 0.116 0.381 PB L2
ENSG00000281344 HELLPAR 995578 sc-eQTL 4.56e-03 0.248 0.0855 0.381 PB L2
ENSG00000017427 IGF1 711419 sc-eQTL 3.02e-01 0.0332 0.0321 0.417 Pro_T L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 7.94e-01 0.021 0.0806 0.417 Pro_T L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 6.47e-01 0.0402 0.0876 0.417 Pro_T L2
ENSG00000120837 NFYB -945078 sc-eQTL 2.41e-01 -0.106 0.0903 0.417 Pro_T L2
ENSG00000139372 TDG -772659 sc-eQTL 6.44e-01 0.0397 0.0858 0.417 Pro_T L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 9.08e-01 0.00692 0.0601 0.417 Pro_T L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 9.95e-01 -0.000469 0.0824 0.417 Pro_T L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 3.88e-01 0.0732 0.0846 0.417 Pro_T L2
ENSG00000281344 HELLPAR 995578 sc-eQTL 8.29e-01 0.014 0.0649 0.417 Pro_T L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 1.66e-01 0.119 0.0858 0.417 Treg L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 3.24e-01 -0.0974 0.0986 0.417 Treg L2
ENSG00000120837 NFYB -945078 sc-eQTL 9.90e-01 0.00111 0.0877 0.417 Treg L2
ENSG00000139372 TDG -772659 sc-eQTL 1.13e-01 -0.153 0.0964 0.417 Treg L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 9.13e-01 -0.00983 0.0897 0.417 Treg L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 7.38e-01 0.0257 0.0769 0.417 Treg L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 1.05e-01 -0.157 0.0962 0.417 Treg L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 7.48e-01 0.0332 0.103 0.422 cDC L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 3.03e-01 -0.093 0.09 0.422 cDC L2
ENSG00000120837 NFYB -945078 sc-eQTL 4.56e-01 -0.0721 0.0965 0.422 cDC L2
ENSG00000139372 TDG -772659 sc-eQTL 8.03e-01 -0.0247 0.0993 0.422 cDC L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 4.12e-01 -0.0723 0.0879 0.422 cDC L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 6.58e-01 0.029 0.0656 0.422 cDC L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 5.79e-01 0.0509 0.0916 0.422 cDC L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 4.27e-01 0.071 0.0891 0.417 cMono_IL1B L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 9.68e-01 -0.00369 0.091 0.417 cMono_IL1B L2
ENSG00000120837 NFYB -945078 sc-eQTL 4.19e-01 -0.075 0.0925 0.417 cMono_IL1B L2
ENSG00000139372 TDG -772659 sc-eQTL 4.22e-01 -0.0571 0.071 0.417 cMono_IL1B L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 7.54e-02 -0.122 0.0683 0.417 cMono_IL1B L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 7.73e-01 0.0239 0.0825 0.417 cMono_IL1B L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 9.91e-01 0.000998 0.0911 0.417 cMono_S100A L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 4.99e-01 -0.0644 0.0949 0.417 cMono_S100A L2
ENSG00000120837 NFYB -945078 sc-eQTL 9.24e-01 -0.00843 0.0883 0.417 cMono_S100A L2
ENSG00000139372 TDG -772659 sc-eQTL 3.16e-01 0.0814 0.081 0.417 cMono_S100A L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 1.10e-01 -0.114 0.071 0.417 cMono_S100A L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 6.09e-01 0.0461 0.0901 0.417 cMono_S100A L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 7.03e-01 -0.0391 0.102 0.461 gdT L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 3.49e-01 0.099 0.105 0.461 gdT L2
ENSG00000120837 NFYB -945078 sc-eQTL 3.42e-01 -0.0961 0.101 0.461 gdT L2
ENSG00000139372 TDG -772659 sc-eQTL 5.64e-01 -0.0589 0.102 0.461 gdT L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 7.43e-03 -0.285 0.105 0.461 gdT L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 1.85e-01 -0.134 0.1 0.461 gdT L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 2.03e-01 0.131 0.102 0.461 gdT L2
ENSG00000281344 HELLPAR 995578 sc-eQTL 2.93e-01 0.0971 0.092 0.461 gdT L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 7.81e-01 0.0247 0.0888 0.418 intMono L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 3.30e-01 -0.0916 0.0938 0.418 intMono L2
ENSG00000120837 NFYB -945078 sc-eQTL 2.78e-01 0.106 0.098 0.418 intMono L2
ENSG00000139372 TDG -772659 sc-eQTL 8.12e-01 0.0218 0.0918 0.418 intMono L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 9.50e-01 0.00519 0.082 0.418 intMono L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 4.67e-01 -0.0611 0.0839 0.418 intMono L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 3.89e-01 0.079 0.0915 0.419 ncMono L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 3.29e-01 -0.0897 0.0916 0.419 ncMono L2
ENSG00000120837 NFYB -945078 sc-eQTL 4.64e-01 -0.0678 0.0925 0.419 ncMono L2
ENSG00000139372 TDG -772659 sc-eQTL 3.11e-01 0.091 0.0896 0.419 ncMono L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 3.97e-01 -0.0676 0.0797 0.419 ncMono L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 6.21e-01 0.0447 0.0902 0.419 ncMono L2
ENSG00000111696 NT5DC3 -648071 sc-eQTL 9.19e-01 -0.0092 0.0907 0.418 pDC L2
ENSG00000111727 HCFC2 -871368 sc-eQTL 3.58e-02 -0.214 0.101 0.418 pDC L2
ENSG00000120837 NFYB -945078 sc-eQTL 6.24e-01 0.0525 0.107 0.418 pDC L2
ENSG00000139372 TDG -772659 sc-eQTL 7.90e-01 0.0243 0.0912 0.418 pDC L2
ENSG00000166598 HSP90B1 -736944 sc-eQTL 7.10e-01 0.0265 0.0713 0.418 pDC L2
ENSG00000179088 C12orf42 -302847 sc-eQTL 6.84e-01 0.0379 0.0929 0.418 pDC L2
ENSG00000204954 C12orf73 -772545 sc-eQTL 8.23e-01 -0.0199 0.0887 0.418 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 711419 sc-eQTL 8.52e-02 0.0785 0.0454 0.417 B_Memory LOneK1K
ENSG00000111696 NT5DC3 -648071 sc-eQTL 3.76e-01 -0.0792 0.0893 0.417 B_Memory LOneK1K
ENSG00000111727 HCFC2 -871368 sc-eQTL 1.41e-01 -0.142 0.0957 0.417 B_Memory LOneK1K
ENSG00000120837 NFYB -945078 sc-eQTL 3.03e-01 0.0907 0.0879 0.417 B_Memory LOneK1K
ENSG00000139372 TDG -772659 sc-eQTL 7.11e-01 -0.0346 0.0932 0.417 B_Memory LOneK1K
ENSG00000166598 HSP90B1 -736944 sc-eQTL 2.12e-01 0.104 0.0831 0.417 B_Memory LOneK1K
ENSG00000179088 C12orf42 -302847 sc-eQTL 9.55e-01 -0.004 0.0714 0.417 B_Memory LOneK1K
ENSG00000204954 C12orf73 -772545 sc-eQTL 2.91e-01 0.102 0.0966 0.417 B_Memory LOneK1K
ENSG00000281344 HELLPAR 995578 sc-eQTL 3.09e-01 -0.0962 0.0944 0.417 B_Memory LOneK1K
ENSG00000017427 IGF1 711419 sc-eQTL 7.90e-01 0.0139 0.0522 0.417 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -648071 sc-eQTL 7.33e-01 -0.0301 0.088 0.417 B_Naive LOneK1K
ENSG00000111727 HCFC2 -871368 sc-eQTL 1.35e-01 0.142 0.0945 0.417 B_Naive LOneK1K
ENSG00000120837 NFYB -945078 sc-eQTL 5.01e-01 -0.0584 0.0866 0.417 B_Naive LOneK1K
ENSG00000139372 TDG -772659 sc-eQTL 6.31e-01 0.0389 0.0808 0.417 B_Naive LOneK1K
ENSG00000166598 HSP90B1 -736944 sc-eQTL 3.67e-01 0.0668 0.0738 0.417 B_Naive LOneK1K
ENSG00000179088 C12orf42 -302847 sc-eQTL 5.73e-01 0.0512 0.0907 0.417 B_Naive LOneK1K
ENSG00000204954 C12orf73 -772545 sc-eQTL 2.65e-01 0.105 0.0939 0.417 B_Naive LOneK1K
ENSG00000281344 HELLPAR 995578 sc-eQTL 8.19e-01 0.0203 0.0885 0.417 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -648071 sc-eQTL 4.94e-01 0.0631 0.0922 0.417 CD14_Mono LOneK1K
ENSG00000111727 HCFC2 -871368 sc-eQTL 8.59e-01 -0.0168 0.0944 0.417 CD14_Mono LOneK1K
ENSG00000120837 NFYB -945078 sc-eQTL 3.19e-01 -0.0871 0.0873 0.417 CD14_Mono LOneK1K
ENSG00000139372 TDG -772659 sc-eQTL 7.94e-01 0.0171 0.0654 0.417 CD14_Mono LOneK1K
ENSG00000166598 HSP90B1 -736944 sc-eQTL 1.30e-01 -0.097 0.0639 0.417 CD14_Mono LOneK1K
ENSG00000204954 C12orf73 -772545 sc-eQTL 5.55e-01 0.0483 0.0816 0.417 CD14_Mono LOneK1K
ENSG00000111696 NT5DC3 -648071 sc-eQTL 2.78e-01 0.101 0.0925 0.414 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -871368 sc-eQTL 4.13e-01 -0.0743 0.0906 0.414 CD16_Mono LOneK1K
ENSG00000120837 NFYB -945078 sc-eQTL 2.85e-01 -0.0952 0.0889 0.414 CD16_Mono LOneK1K
ENSG00000139372 TDG -772659 sc-eQTL 5.25e-01 0.0549 0.0862 0.414 CD16_Mono LOneK1K
ENSG00000166598 HSP90B1 -736944 sc-eQTL 9.11e-01 -0.00965 0.0861 0.414 CD16_Mono LOneK1K
ENSG00000204954 C12orf73 -772545 sc-eQTL 9.49e-01 -0.00565 0.0888 0.414 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -871368 sc-eQTL 2.64e-01 -0.096 0.0857 0.416 NK_CD56dim LOneK1K
ENSG00000120837 NFYB -945078 sc-eQTL 8.72e-01 -0.0122 0.0758 0.416 NK_CD56dim LOneK1K
ENSG00000139372 TDG -772659 sc-eQTL 6.93e-01 0.0295 0.0747 0.416 NK_CD56dim LOneK1K
ENSG00000166598 HSP90B1 -736944 sc-eQTL 1.74e-01 -0.107 0.0783 0.416 NK_CD56dim LOneK1K
ENSG00000204954 C12orf73 -772545 sc-eQTL 2.50e-01 0.095 0.0823 0.416 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136011 STAB2 -394110 pQTL 0.0125 -0.0553 0.0221 0.0 0.0 0.436
ENSG00000214198 TTC41P -737048 eQTL 0.0182 0.0901 0.0381 0.00136 0.0 0.44

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000214198 TTC41P -737048 3.07e-07 1.42e-07 6.28e-08 2.05e-07 9.94e-08 8.33e-08 1.99e-07 5.82e-08 1.66e-07 9.35e-08 1.63e-07 1.31e-07 2.05e-07 8.13e-08 5.36e-08 8.71e-08 4.45e-08 1.72e-07 7.09e-08 5.35e-08 1.22e-07 1.47e-07 1.62e-07 3.58e-08 1.98e-07 1.31e-07 1.2e-07 1.04e-07 1.31e-07 1.06e-07 1.06e-07 3.72e-08 3.21e-08 9.81e-08 3.12e-08 2.85e-08 5.35e-08 8.2e-08 6.28e-08 4.41e-08 5.81e-08 1.48e-07 4.87e-08 1.86e-08 3.07e-08 1.68e-08 8.98e-08 1.98e-09 4.83e-08