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Genes within 1Mb (chr12:103192196:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 710452 sc-eQTL 6.05e-01 0.0204 0.0394 0.412 B L1
ENSG00000111696 NT5DC3 -649038 sc-eQTL 3.60e-01 -0.0791 0.0863 0.412 B L1
ENSG00000111727 HCFC2 -872335 sc-eQTL 4.58e-01 0.0598 0.0805 0.412 B L1
ENSG00000120837 NFYB -946045 sc-eQTL 5.68e-01 0.0445 0.0777 0.412 B L1
ENSG00000139372 TDG -773626 sc-eQTL 9.75e-01 0.0024 0.0776 0.412 B L1
ENSG00000166598 HSP90B1 -737911 sc-eQTL 5.41e-01 0.0298 0.0487 0.412 B L1
ENSG00000179088 C12orf42 -303814 sc-eQTL 2.82e-01 0.0781 0.0725 0.412 B L1
ENSG00000204954 C12orf73 -773512 sc-eQTL 2.34e-01 0.0996 0.0835 0.412 B L1
ENSG00000281344 HELLPAR 994611 sc-eQTL 6.76e-01 -0.0318 0.076 0.412 B L1
ENSG00000111696 NT5DC3 -649038 sc-eQTL 6.62e-01 -0.0322 0.0734 0.412 CD4T L1
ENSG00000111727 HCFC2 -872335 sc-eQTL 4.98e-01 -0.05 0.0737 0.412 CD4T L1
ENSG00000120837 NFYB -946045 sc-eQTL 8.53e-01 0.0118 0.0634 0.412 CD4T L1
ENSG00000139372 TDG -773626 sc-eQTL 5.76e-01 -0.0366 0.0653 0.412 CD4T L1
ENSG00000166598 HSP90B1 -737911 sc-eQTL 7.26e-01 -0.0248 0.0706 0.412 CD4T L1
ENSG00000179088 C12orf42 -303814 sc-eQTL 4.71e-02 0.161 0.0807 0.412 CD4T L1
ENSG00000204954 C12orf73 -773512 sc-eQTL 6.86e-01 -0.0284 0.0701 0.412 CD4T L1
ENSG00000111696 NT5DC3 -649038 sc-eQTL 9.61e-01 -0.00369 0.0748 0.412 CD8T L1
ENSG00000111727 HCFC2 -872335 sc-eQTL 5.97e-01 -0.0428 0.0808 0.412 CD8T L1
ENSG00000120837 NFYB -946045 sc-eQTL 6.46e-01 -0.0349 0.0759 0.412 CD8T L1
ENSG00000139372 TDG -773626 sc-eQTL 5.05e-01 0.0456 0.0683 0.412 CD8T L1
ENSG00000166598 HSP90B1 -737911 sc-eQTL 1.78e-01 -0.0975 0.0721 0.412 CD8T L1
ENSG00000179088 C12orf42 -303814 sc-eQTL 2.52e-01 0.1 0.0872 0.412 CD8T L1
ENSG00000204954 C12orf73 -773512 sc-eQTL 5.51e-01 0.0497 0.0833 0.412 CD8T L1
ENSG00000111696 NT5DC3 -649038 sc-eQTL 5.60e-01 0.0532 0.0911 0.414 DC L1
ENSG00000111727 HCFC2 -872335 sc-eQTL 2.38e-01 -0.115 0.0974 0.414 DC L1
ENSG00000120837 NFYB -946045 sc-eQTL 6.16e-01 -0.044 0.0875 0.414 DC L1
ENSG00000139372 TDG -773626 sc-eQTL 6.64e-01 -0.0389 0.0895 0.414 DC L1
ENSG00000166598 HSP90B1 -737911 sc-eQTL 8.59e-01 0.0105 0.0588 0.414 DC L1
ENSG00000179088 C12orf42 -303814 sc-eQTL 9.22e-01 0.00759 0.077 0.414 DC L1
ENSG00000204954 C12orf73 -773512 sc-eQTL 9.02e-01 0.0114 0.0926 0.414 DC L1
ENSG00000111696 NT5DC3 -649038 sc-eQTL 5.78e-01 0.053 0.0951 0.412 Mono L1
ENSG00000111727 HCFC2 -872335 sc-eQTL 9.13e-01 0.00958 0.0876 0.412 Mono L1
ENSG00000120837 NFYB -946045 sc-eQTL 2.97e-01 -0.0854 0.0817 0.412 Mono L1
ENSG00000139372 TDG -773626 sc-eQTL 8.73e-01 0.01 0.0629 0.412 Mono L1
ENSG00000166598 HSP90B1 -737911 sc-eQTL 1.78e-01 -0.0846 0.0627 0.412 Mono L1
ENSG00000204954 C12orf73 -773512 sc-eQTL 8.36e-01 0.0167 0.0809 0.412 Mono L1
ENSG00000111727 HCFC2 -872335 sc-eQTL 3.60e-01 -0.0765 0.0833 0.412 NK L1
ENSG00000120837 NFYB -946045 sc-eQTL 5.79e-01 -0.0427 0.0769 0.412 NK L1
ENSG00000139372 TDG -773626 sc-eQTL 8.27e-01 0.0157 0.0716 0.412 NK L1
ENSG00000166598 HSP90B1 -737911 sc-eQTL 1.54e-01 -0.113 0.0789 0.412 NK L1
ENSG00000204954 C12orf73 -773512 sc-eQTL 2.83e-01 0.0849 0.0789 0.412 NK L1
ENSG00000017427 IGF1 710452 sc-eQTL 5.28e-01 0.0188 0.0297 0.412 Other_T L1
ENSG00000111696 NT5DC3 -649038 sc-eQTL 4.61e-01 -0.0627 0.085 0.412 Other_T L1
ENSG00000111727 HCFC2 -872335 sc-eQTL 6.10e-01 0.0443 0.0867 0.412 Other_T L1
ENSG00000120837 NFYB -946045 sc-eQTL 8.87e-01 0.0112 0.0787 0.412 Other_T L1
ENSG00000139372 TDG -773626 sc-eQTL 7.92e-01 -0.0199 0.0756 0.412 Other_T L1
ENSG00000166598 HSP90B1 -737911 sc-eQTL 1.10e-01 -0.109 0.0681 0.412 Other_T L1
ENSG00000179088 C12orf42 -303814 sc-eQTL 4.35e-01 0.0671 0.0858 0.412 Other_T L1
ENSG00000204954 C12orf73 -773512 sc-eQTL 8.83e-02 0.151 0.0879 0.412 Other_T L1
ENSG00000281344 HELLPAR 994611 sc-eQTL 7.49e-01 0.0225 0.0702 0.412 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 710452 sc-eQTL 1.63e-01 0.0264 0.0188 0.416 B_Activated L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 4.90e-01 0.0607 0.0877 0.416 B_Activated L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 7.87e-01 -0.0261 0.0966 0.416 B_Activated L2
ENSG00000120837 NFYB -946045 sc-eQTL 4.24e-01 0.0834 0.104 0.416 B_Activated L2
ENSG00000139372 TDG -773626 sc-eQTL 2.30e-01 -0.125 0.104 0.416 B_Activated L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 3.69e-01 0.101 0.112 0.416 B_Activated L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 6.80e-01 -0.0354 0.0858 0.416 B_Activated L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 6.58e-01 0.0417 0.0942 0.416 B_Activated L2
ENSG00000281344 HELLPAR 994611 sc-eQTL 8.47e-01 -0.0148 0.0765 0.416 B_Activated L2
ENSG00000017427 IGF1 710452 sc-eQTL 2.34e-01 0.048 0.0402 0.41 B_Intermediate L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 3.83e-01 -0.0793 0.0907 0.41 B_Intermediate L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 3.35e-01 -0.0916 0.0947 0.41 B_Intermediate L2
ENSG00000120837 NFYB -946045 sc-eQTL 4.01e-01 0.0848 0.101 0.41 B_Intermediate L2
ENSG00000139372 TDG -773626 sc-eQTL 6.19e-01 0.0505 0.102 0.41 B_Intermediate L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 2.63e-01 0.102 0.0906 0.41 B_Intermediate L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 7.84e-01 0.0243 0.0887 0.41 B_Intermediate L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 3.50e-01 0.0898 0.0959 0.41 B_Intermediate L2
ENSG00000281344 HELLPAR 994611 sc-eQTL 6.97e-02 -0.169 0.0928 0.41 B_Intermediate L2
ENSG00000017427 IGF1 710452 sc-eQTL 6.00e-01 0.019 0.0362 0.414 B_Memory L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 3.88e-01 0.079 0.0912 0.414 B_Memory L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 4.96e-01 -0.0671 0.0984 0.414 B_Memory L2
ENSG00000120837 NFYB -946045 sc-eQTL 7.64e-01 -0.0292 0.0972 0.414 B_Memory L2
ENSG00000139372 TDG -773626 sc-eQTL 8.09e-01 -0.024 0.0992 0.414 B_Memory L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 5.64e-01 0.0507 0.0877 0.414 B_Memory L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 2.78e-01 -0.0983 0.0904 0.414 B_Memory L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 2.10e-01 0.121 0.0963 0.414 B_Memory L2
ENSG00000281344 HELLPAR 994611 sc-eQTL 9.61e-01 0.00414 0.084 0.414 B_Memory L2
ENSG00000017427 IGF1 710452 sc-eQTL 9.15e-01 -0.00527 0.0495 0.412 B_Naive1 L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 6.40e-01 -0.0413 0.088 0.412 B_Naive1 L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 1.86e-02 0.226 0.0953 0.412 B_Naive1 L2
ENSG00000120837 NFYB -946045 sc-eQTL 4.32e-01 -0.0722 0.0916 0.412 B_Naive1 L2
ENSG00000139372 TDG -773626 sc-eQTL 5.99e-01 0.0447 0.085 0.412 B_Naive1 L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 5.86e-01 0.0395 0.0725 0.412 B_Naive1 L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 4.33e-01 -0.0737 0.0939 0.412 B_Naive1 L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 3.23e-01 -0.0918 0.0927 0.412 B_Naive1 L2
ENSG00000281344 HELLPAR 994611 sc-eQTL 5.07e-01 -0.0589 0.0886 0.412 B_Naive1 L2
ENSG00000017427 IGF1 710452 sc-eQTL 7.52e-01 0.0138 0.0436 0.414 B_Naive2 L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 8.19e-01 0.0215 0.0935 0.414 B_Naive2 L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 4.37e-01 -0.0769 0.0987 0.414 B_Naive2 L2
ENSG00000120837 NFYB -946045 sc-eQTL 4.66e-01 0.0699 0.0958 0.414 B_Naive2 L2
ENSG00000139372 TDG -773626 sc-eQTL 4.61e-01 -0.0646 0.0875 0.414 B_Naive2 L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 2.77e-01 0.0967 0.0887 0.414 B_Naive2 L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 2.01e-01 0.118 0.0921 0.414 B_Naive2 L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 8.20e-03 0.256 0.0958 0.414 B_Naive2 L2
ENSG00000281344 HELLPAR 994611 sc-eQTL 4.07e-01 0.0708 0.0851 0.414 B_Naive2 L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 1.70e-02 -0.202 0.0838 0.425 CD4_CTL L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 8.16e-01 0.0225 0.0965 0.425 CD4_CTL L2
ENSG00000120837 NFYB -946045 sc-eQTL 7.16e-01 0.035 0.096 0.425 CD4_CTL L2
ENSG00000139372 TDG -773626 sc-eQTL 2.95e-02 0.219 0.0998 0.425 CD4_CTL L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 5.47e-01 -0.0517 0.0856 0.425 CD4_CTL L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 3.85e-01 0.0761 0.0875 0.425 CD4_CTL L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 9.01e-01 -0.0118 0.0948 0.425 CD4_CTL L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 7.07e-01 -0.0288 0.0763 0.412 CD4_Naive L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 9.87e-01 0.00125 0.0795 0.412 CD4_Naive L2
ENSG00000120837 NFYB -946045 sc-eQTL 6.15e-01 -0.0344 0.0682 0.412 CD4_Naive L2
ENSG00000139372 TDG -773626 sc-eQTL 6.05e-01 -0.0357 0.069 0.412 CD4_Naive L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 5.02e-01 -0.0474 0.0704 0.412 CD4_Naive L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 6.33e-02 0.157 0.084 0.412 CD4_Naive L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 9.79e-01 -0.00203 0.0771 0.412 CD4_Naive L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 9.69e-01 -0.00344 0.089 0.412 CD4_TCM L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 1.52e-01 -0.135 0.0941 0.412 CD4_TCM L2
ENSG00000120837 NFYB -946045 sc-eQTL 3.49e-01 0.0796 0.0848 0.412 CD4_TCM L2
ENSG00000139372 TDG -773626 sc-eQTL 6.84e-01 -0.0313 0.0769 0.412 CD4_TCM L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 8.57e-01 0.0137 0.0758 0.412 CD4_TCM L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 2.76e-01 0.0957 0.0877 0.412 CD4_TCM L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 5.15e-01 0.0567 0.0869 0.412 CD4_TCM L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 6.63e-02 -0.171 0.0928 0.412 CD4_TEM L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 9.28e-01 0.00865 0.0955 0.412 CD4_TEM L2
ENSG00000120837 NFYB -946045 sc-eQTL 1.55e-01 0.129 0.0906 0.412 CD4_TEM L2
ENSG00000139372 TDG -773626 sc-eQTL 5.30e-01 -0.0567 0.0901 0.412 CD4_TEM L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 3.75e-01 -0.0794 0.0894 0.412 CD4_TEM L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 2.89e-01 0.0989 0.0931 0.412 CD4_TEM L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 3.03e-01 -0.0931 0.0901 0.412 CD4_TEM L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 5.68e-01 0.0476 0.0833 0.412 CD8_CTL L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 6.56e-01 -0.0419 0.094 0.412 CD8_CTL L2
ENSG00000120837 NFYB -946045 sc-eQTL 2.53e-01 -0.101 0.0884 0.412 CD8_CTL L2
ENSG00000139372 TDG -773626 sc-eQTL 3.16e-01 0.0885 0.088 0.412 CD8_CTL L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 8.26e-02 -0.134 0.0769 0.412 CD8_CTL L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 8.61e-01 0.0159 0.091 0.412 CD8_CTL L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 3.23e-02 0.179 0.0831 0.412 CD8_CTL L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 2.97e-01 -0.0903 0.0863 0.412 CD8_Naive L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 9.92e-01 -0.000938 0.095 0.412 CD8_Naive L2
ENSG00000120837 NFYB -946045 sc-eQTL 9.18e-01 -0.00905 0.0878 0.412 CD8_Naive L2
ENSG00000139372 TDG -773626 sc-eQTL 7.16e-01 0.0287 0.0789 0.412 CD8_Naive L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 1.71e-01 -0.103 0.0747 0.412 CD8_Naive L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 7.30e-01 0.031 0.0898 0.412 CD8_Naive L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 3.55e-01 -0.0807 0.087 0.412 CD8_Naive L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 8.60e-01 0.0151 0.0855 0.419 CD8_TCM L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 6.95e-01 0.0373 0.0951 0.419 CD8_TCM L2
ENSG00000120837 NFYB -946045 sc-eQTL 3.62e-01 0.0873 0.0956 0.419 CD8_TCM L2
ENSG00000139372 TDG -773626 sc-eQTL 7.77e-01 -0.0268 0.0944 0.419 CD8_TCM L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 7.79e-01 0.0252 0.0898 0.419 CD8_TCM L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 2.16e-01 0.109 0.0879 0.419 CD8_TCM L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 9.93e-01 0.000873 0.0977 0.419 CD8_TCM L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 1.45e-01 0.129 0.0882 0.42 CD8_TEM L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 6.65e-02 -0.176 0.0955 0.42 CD8_TEM L2
ENSG00000120837 NFYB -946045 sc-eQTL 3.02e-01 -0.0949 0.0918 0.42 CD8_TEM L2
ENSG00000139372 TDG -773626 sc-eQTL 2.11e-01 -0.123 0.0981 0.42 CD8_TEM L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 5.80e-01 -0.0509 0.0918 0.42 CD8_TEM L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 9.37e-01 0.0073 0.0922 0.42 CD8_TEM L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 2.38e-01 0.111 0.0941 0.42 CD8_TEM L2
ENSG00000017427 IGF1 710452 sc-eQTL 8.52e-01 -0.00599 0.0322 0.416 MAIT L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 9.49e-02 -0.15 0.0891 0.416 MAIT L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 8.65e-01 -0.0156 0.0919 0.416 MAIT L2
ENSG00000120837 NFYB -946045 sc-eQTL 9.65e-01 -0.00394 0.0894 0.416 MAIT L2
ENSG00000139372 TDG -773626 sc-eQTL 2.22e-01 0.118 0.0964 0.416 MAIT L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 8.38e-02 -0.162 0.0932 0.416 MAIT L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 2.46e-01 0.0976 0.0839 0.416 MAIT L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 2.99e-02 0.205 0.0936 0.416 MAIT L2
ENSG00000281344 HELLPAR 994611 sc-eQTL 7.54e-01 -0.0244 0.0779 0.416 MAIT L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 7.51e-01 0.0291 0.0917 0.416 NK_CD56bright L2
ENSG00000120837 NFYB -946045 sc-eQTL 8.14e-01 -0.0219 0.0929 0.416 NK_CD56bright L2
ENSG00000139372 TDG -773626 sc-eQTL 5.37e-01 -0.0584 0.0944 0.416 NK_CD56bright L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 2.89e-01 -0.099 0.0931 0.416 NK_CD56bright L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 5.87e-01 -0.0537 0.0988 0.416 NK_CD56bright L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 4.91e-01 -0.0638 0.0926 0.412 NK_CD56dim L2
ENSG00000120837 NFYB -946045 sc-eQTL 7.40e-01 -0.0275 0.0828 0.412 NK_CD56dim L2
ENSG00000139372 TDG -773626 sc-eQTL 9.84e-01 0.00162 0.0785 0.412 NK_CD56dim L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 8.04e-02 -0.137 0.0781 0.412 NK_CD56dim L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 7.53e-02 0.16 0.0895 0.412 NK_CD56dim L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 4.07e-01 -0.0807 0.0972 0.418 NK_HLA L2
ENSG00000120837 NFYB -946045 sc-eQTL 5.56e-01 0.0583 0.0988 0.418 NK_HLA L2
ENSG00000139372 TDG -773626 sc-eQTL 9.13e-01 0.0107 0.0976 0.418 NK_HLA L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 7.54e-02 -0.17 0.0951 0.418 NK_HLA L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 4.41e-01 -0.0684 0.0885 0.418 NK_HLA L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 5.70e-01 -0.0543 0.0953 0.412 NK_cytokine L2
ENSG00000120837 NFYB -946045 sc-eQTL 2.66e-01 -0.092 0.0825 0.412 NK_cytokine L2
ENSG00000139372 TDG -773626 sc-eQTL 8.93e-01 0.0114 0.0845 0.412 NK_cytokine L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 6.77e-01 -0.035 0.0839 0.412 NK_cytokine L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 6.20e-01 0.0435 0.0877 0.412 NK_cytokine L2
ENSG00000017427 IGF1 710452 sc-eQTL 2.46e-02 0.162 0.0709 0.378 PB L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 6.29e-01 -0.0552 0.114 0.378 PB L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 5.09e-01 -0.0645 0.0972 0.378 PB L2
ENSG00000120837 NFYB -946045 sc-eQTL 1.51e-01 0.163 0.112 0.378 PB L2
ENSG00000139372 TDG -773626 sc-eQTL 1.39e-01 -0.171 0.115 0.378 PB L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 2.05e-01 0.0674 0.0529 0.378 PB L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 8.99e-01 -0.0119 0.0933 0.378 PB L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 9.40e-01 0.00881 0.116 0.378 PB L2
ENSG00000281344 HELLPAR 994611 sc-eQTL 5.76e-03 0.241 0.0856 0.378 PB L2
ENSG00000017427 IGF1 710452 sc-eQTL 2.63e-01 0.0363 0.0323 0.413 Pro_T L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 7.94e-01 0.0213 0.0813 0.413 Pro_T L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 6.79e-01 0.0366 0.0883 0.413 Pro_T L2
ENSG00000120837 NFYB -946045 sc-eQTL 3.00e-01 -0.0946 0.0912 0.413 Pro_T L2
ENSG00000139372 TDG -773626 sc-eQTL 6.49e-01 0.0395 0.0866 0.413 Pro_T L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 8.63e-01 0.0105 0.0606 0.413 Pro_T L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 9.83e-01 0.00179 0.0832 0.413 Pro_T L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 5.82e-01 0.0471 0.0855 0.413 Pro_T L2
ENSG00000281344 HELLPAR 994611 sc-eQTL 9.29e-01 0.0058 0.0655 0.413 Pro_T L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 1.83e-01 0.115 0.0863 0.412 Treg L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 3.33e-01 -0.0962 0.0991 0.412 Treg L2
ENSG00000120837 NFYB -946045 sc-eQTL 9.24e-01 -0.0084 0.0882 0.412 Treg L2
ENSG00000139372 TDG -773626 sc-eQTL 1.40e-01 -0.144 0.097 0.412 Treg L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 8.52e-01 -0.0169 0.0901 0.412 Treg L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 7.32e-01 0.0265 0.0773 0.412 Treg L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 1.52e-01 -0.139 0.0968 0.412 Treg L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 6.55e-01 0.0466 0.104 0.417 cDC L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 3.00e-01 -0.0943 0.0907 0.417 cDC L2
ENSG00000120837 NFYB -946045 sc-eQTL 4.13e-01 -0.0798 0.0972 0.417 cDC L2
ENSG00000139372 TDG -773626 sc-eQTL 6.55e-01 -0.0448 0.1 0.417 cDC L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 4.13e-01 -0.0726 0.0885 0.417 cDC L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 7.57e-01 0.0205 0.0661 0.417 cDC L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 6.54e-01 0.0415 0.0923 0.417 cDC L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 3.99e-01 0.0757 0.0896 0.412 cMono_IL1B L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 9.12e-01 0.0102 0.0915 0.412 cMono_IL1B L2
ENSG00000120837 NFYB -946045 sc-eQTL 3.26e-01 -0.0915 0.093 0.412 cMono_IL1B L2
ENSG00000139372 TDG -773626 sc-eQTL 3.97e-01 -0.0606 0.0714 0.412 cMono_IL1B L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 5.54e-02 -0.132 0.0686 0.412 cMono_IL1B L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 9.35e-01 0.00674 0.083 0.412 cMono_IL1B L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 9.95e-01 -0.00058 0.0915 0.412 cMono_S100A L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 6.07e-01 -0.0492 0.0954 0.412 cMono_S100A L2
ENSG00000120837 NFYB -946045 sc-eQTL 8.64e-01 -0.0152 0.0887 0.412 cMono_S100A L2
ENSG00000139372 TDG -773626 sc-eQTL 3.32e-01 0.0791 0.0814 0.412 cMono_S100A L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 6.10e-02 -0.134 0.0712 0.412 cMono_S100A L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 5.84e-01 0.0497 0.0905 0.412 cMono_S100A L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 7.28e-01 -0.036 0.103 0.458 gdT L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 4.37e-01 0.0832 0.107 0.458 gdT L2
ENSG00000120837 NFYB -946045 sc-eQTL 3.62e-01 -0.0931 0.102 0.458 gdT L2
ENSG00000139372 TDG -773626 sc-eQTL 5.71e-01 -0.0584 0.103 0.458 gdT L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 4.71e-03 -0.304 0.106 0.458 gdT L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 2.16e-01 -0.126 0.101 0.458 gdT L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 1.53e-01 0.148 0.103 0.458 gdT L2
ENSG00000281344 HELLPAR 994611 sc-eQTL 2.46e-01 0.108 0.0928 0.458 gdT L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 7.60e-01 0.0272 0.0891 0.413 intMono L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 2.46e-01 -0.109 0.094 0.413 intMono L2
ENSG00000120837 NFYB -946045 sc-eQTL 3.28e-01 0.0964 0.0983 0.413 intMono L2
ENSG00000139372 TDG -773626 sc-eQTL 9.88e-01 -0.00141 0.0921 0.413 intMono L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 9.43e-01 -0.00585 0.0822 0.413 intMono L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 5.62e-01 -0.0489 0.0842 0.413 intMono L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 4.18e-01 0.0746 0.0919 0.414 ncMono L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 3.79e-01 -0.081 0.092 0.414 ncMono L2
ENSG00000120837 NFYB -946045 sc-eQTL 5.17e-01 -0.0603 0.0929 0.414 ncMono L2
ENSG00000139372 TDG -773626 sc-eQTL 2.90e-01 0.0954 0.09 0.414 ncMono L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 3.92e-01 -0.0686 0.08 0.414 ncMono L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 7.45e-01 0.0295 0.0906 0.414 ncMono L2
ENSG00000111696 NT5DC3 -649038 sc-eQTL 9.80e-01 0.00224 0.0914 0.412 pDC L2
ENSG00000111727 HCFC2 -872335 sc-eQTL 5.12e-02 -0.201 0.102 0.412 pDC L2
ENSG00000120837 NFYB -946045 sc-eQTL 5.54e-01 0.064 0.108 0.412 pDC L2
ENSG00000139372 TDG -773626 sc-eQTL 9.13e-01 0.01 0.0919 0.412 pDC L2
ENSG00000166598 HSP90B1 -737911 sc-eQTL 6.37e-01 0.034 0.0718 0.412 pDC L2
ENSG00000179088 C12orf42 -303814 sc-eQTL 8.02e-01 0.0235 0.0936 0.412 pDC L2
ENSG00000204954 C12orf73 -773512 sc-eQTL 9.22e-01 -0.00871 0.0894 0.412 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 710452 sc-eQTL 1.30e-01 0.0698 0.046 0.412 B_Memory LOneK1K
ENSG00000111696 NT5DC3 -649038 sc-eQTL 4.58e-01 -0.0671 0.0903 0.412 B_Memory LOneK1K
ENSG00000111727 HCFC2 -872335 sc-eQTL 1.36e-01 -0.145 0.0968 0.412 B_Memory LOneK1K
ENSG00000120837 NFYB -946045 sc-eQTL 3.86e-01 0.0772 0.0889 0.412 B_Memory LOneK1K
ENSG00000139372 TDG -773626 sc-eQTL 8.45e-01 -0.0184 0.0942 0.412 B_Memory LOneK1K
ENSG00000166598 HSP90B1 -737911 sc-eQTL 2.09e-01 0.106 0.084 0.412 B_Memory LOneK1K
ENSG00000179088 C12orf42 -303814 sc-eQTL 8.76e-01 -0.0113 0.0722 0.412 B_Memory LOneK1K
ENSG00000204954 C12orf73 -773512 sc-eQTL 3.04e-01 0.101 0.0977 0.412 B_Memory LOneK1K
ENSG00000281344 HELLPAR 994611 sc-eQTL 3.43e-01 -0.0908 0.0954 0.412 B_Memory LOneK1K
ENSG00000017427 IGF1 710452 sc-eQTL 9.69e-01 0.00204 0.0524 0.412 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -649038 sc-eQTL 7.16e-01 -0.0322 0.0883 0.412 B_Naive LOneK1K
ENSG00000111727 HCFC2 -872335 sc-eQTL 8.12e-02 0.166 0.0947 0.412 B_Naive LOneK1K
ENSG00000120837 NFYB -946045 sc-eQTL 6.25e-01 -0.0425 0.087 0.412 B_Naive LOneK1K
ENSG00000139372 TDG -773626 sc-eQTL 4.72e-01 0.0584 0.0811 0.412 B_Naive LOneK1K
ENSG00000166598 HSP90B1 -737911 sc-eQTL 3.77e-01 0.0657 0.0741 0.412 B_Naive LOneK1K
ENSG00000179088 C12orf42 -303814 sc-eQTL 7.44e-01 0.0298 0.0911 0.412 B_Naive LOneK1K
ENSG00000204954 C12orf73 -773512 sc-eQTL 4.43e-01 0.0726 0.0945 0.412 B_Naive LOneK1K
ENSG00000281344 HELLPAR 994611 sc-eQTL 9.73e-01 0.00305 0.0889 0.412 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -649038 sc-eQTL 5.00e-01 0.0625 0.0925 0.412 CD14_Mono LOneK1K
ENSG00000111727 HCFC2 -872335 sc-eQTL 9.96e-01 0.000459 0.0947 0.412 CD14_Mono LOneK1K
ENSG00000120837 NFYB -946045 sc-eQTL 2.78e-01 -0.0952 0.0875 0.412 CD14_Mono LOneK1K
ENSG00000139372 TDG -773626 sc-eQTL 8.81e-01 0.00981 0.0657 0.412 CD14_Mono LOneK1K
ENSG00000166598 HSP90B1 -737911 sc-eQTL 7.51e-02 -0.114 0.0639 0.412 CD14_Mono LOneK1K
ENSG00000204954 C12orf73 -773512 sc-eQTL 6.62e-01 0.0358 0.0819 0.412 CD14_Mono LOneK1K
ENSG00000111696 NT5DC3 -649038 sc-eQTL 3.02e-01 0.0961 0.0928 0.409 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -872335 sc-eQTL 4.35e-01 -0.0712 0.0909 0.409 CD16_Mono LOneK1K
ENSG00000120837 NFYB -946045 sc-eQTL 3.22e-01 -0.0886 0.0892 0.409 CD16_Mono LOneK1K
ENSG00000139372 TDG -773626 sc-eQTL 6.29e-01 0.0419 0.0865 0.409 CD16_Mono LOneK1K
ENSG00000166598 HSP90B1 -737911 sc-eQTL 8.77e-01 -0.0134 0.0864 0.409 CD16_Mono LOneK1K
ENSG00000204954 C12orf73 -773512 sc-eQTL 9.05e-01 -0.0106 0.089 0.409 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -872335 sc-eQTL 2.84e-01 -0.0927 0.0863 0.412 NK_CD56dim LOneK1K
ENSG00000120837 NFYB -946045 sc-eQTL 7.41e-01 -0.0253 0.0762 0.412 NK_CD56dim LOneK1K
ENSG00000139372 TDG -773626 sc-eQTL 5.67e-01 0.0431 0.0752 0.412 NK_CD56dim LOneK1K
ENSG00000166598 HSP90B1 -737911 sc-eQTL 1.44e-01 -0.116 0.0787 0.412 NK_CD56dim LOneK1K
ENSG00000204954 C12orf73 -773512 sc-eQTL 3.09e-01 0.0846 0.0829 0.412 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136011 STAB2 -395077 pQTL 0.0127 -0.0554 0.0222 0.0 0.0 0.432
ENSG00000214198 TTC41P -738015 eQTL 0.0134 0.0944 0.0381 0.00155 0.0 0.437

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000214198 TTC41P -738015 3.92e-07 1.92e-07 8.83e-08 2.92e-07 1.07e-07 1.28e-07 3.11e-07 5.68e-08 1.98e-07 1.21e-07 1.96e-07 1.62e-07 3.4e-07 8.85e-08 1.07e-07 1.1e-07 8.53e-08 2.56e-07 9.97e-08 7.05e-08 1.33e-07 1.89e-07 1.89e-07 4.37e-08 2.99e-07 1.65e-07 1.48e-07 1.48e-07 1.37e-07 3.3e-07 1.39e-07 5.69e-08 4.34e-08 1.02e-07 1.07e-07 5.05e-08 4.43e-08 6.32e-08 5.25e-08 2.17e-08 5.94e-08 1.64e-07 2.62e-08 2.03e-08 4.36e-08 1.05e-08 7e-08 1.18e-08 4.72e-08