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Genes within 1Mb (chr12:103190890:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 709146 sc-eQTL 5.94e-01 0.0217 0.0406 0.637 B L1
ENSG00000111696 NT5DC3 -650344 sc-eQTL 2.23e-01 -0.108 0.0886 0.637 B L1
ENSG00000111727 HCFC2 -873641 sc-eQTL 2.85e-01 0.0886 0.0827 0.637 B L1
ENSG00000120837 NFYB -947351 sc-eQTL 6.85e-01 -0.0325 0.0799 0.637 B L1
ENSG00000139372 TDG -774932 sc-eQTL 8.91e-01 0.011 0.0798 0.637 B L1
ENSG00000166598 HSP90B1 -739217 sc-eQTL 1.55e-01 -0.0712 0.0499 0.637 B L1
ENSG00000179088 C12orf42 -305120 sc-eQTL 1.41e-02 0.182 0.0737 0.637 B L1
ENSG00000204954 C12orf73 -774818 sc-eQTL 5.91e-01 0.0464 0.0861 0.637 B L1
ENSG00000281344 HELLPAR 993305 sc-eQTL 1.75e-01 -0.106 0.0778 0.637 B L1
ENSG00000111696 NT5DC3 -650344 sc-eQTL 4.77e-01 -0.0538 0.0755 0.637 CD4T L1
ENSG00000111727 HCFC2 -873641 sc-eQTL 4.54e-01 0.0569 0.0758 0.637 CD4T L1
ENSG00000120837 NFYB -947351 sc-eQTL 6.68e-01 0.028 0.0652 0.637 CD4T L1
ENSG00000139372 TDG -774932 sc-eQTL 5.04e-01 -0.045 0.0672 0.637 CD4T L1
ENSG00000166598 HSP90B1 -739217 sc-eQTL 7.01e-01 0.0279 0.0727 0.637 CD4T L1
ENSG00000179088 C12orf42 -305120 sc-eQTL 2.59e-02 0.186 0.0828 0.637 CD4T L1
ENSG00000204954 C12orf73 -774818 sc-eQTL 9.01e-01 -0.00898 0.0722 0.637 CD4T L1
ENSG00000111696 NT5DC3 -650344 sc-eQTL 5.79e-01 -0.0428 0.077 0.637 CD8T L1
ENSG00000111727 HCFC2 -873641 sc-eQTL 1.39e-01 0.123 0.0829 0.637 CD8T L1
ENSG00000120837 NFYB -947351 sc-eQTL 8.34e-01 0.0164 0.0782 0.637 CD8T L1
ENSG00000139372 TDG -774932 sc-eQTL 9.28e-01 0.00634 0.0704 0.637 CD8T L1
ENSG00000166598 HSP90B1 -739217 sc-eQTL 8.85e-01 -0.0108 0.0746 0.637 CD8T L1
ENSG00000179088 C12orf42 -305120 sc-eQTL 6.99e-01 0.0349 0.0901 0.637 CD8T L1
ENSG00000204954 C12orf73 -774818 sc-eQTL 9.32e-01 -0.00731 0.0859 0.637 CD8T L1
ENSG00000111696 NT5DC3 -650344 sc-eQTL 2.96e-01 -0.0998 0.0951 0.64 DC L1
ENSG00000111727 HCFC2 -873641 sc-eQTL 3.09e-01 -0.104 0.102 0.64 DC L1
ENSG00000120837 NFYB -947351 sc-eQTL 6.29e-01 0.0444 0.0916 0.64 DC L1
ENSG00000139372 TDG -774932 sc-eQTL 9.52e-01 -0.00563 0.0937 0.64 DC L1
ENSG00000166598 HSP90B1 -739217 sc-eQTL 6.97e-01 0.024 0.0615 0.64 DC L1
ENSG00000179088 C12orf42 -305120 sc-eQTL 8.99e-01 -0.0102 0.0806 0.64 DC L1
ENSG00000204954 C12orf73 -774818 sc-eQTL 2.16e-01 0.12 0.0966 0.64 DC L1
ENSG00000111696 NT5DC3 -650344 sc-eQTL 2.78e-01 -0.106 0.0978 0.637 Mono L1
ENSG00000111727 HCFC2 -873641 sc-eQTL 2.96e-01 0.0944 0.0901 0.637 Mono L1
ENSG00000120837 NFYB -947351 sc-eQTL 4.14e-01 -0.0689 0.0843 0.637 Mono L1
ENSG00000139372 TDG -774932 sc-eQTL 8.36e-01 0.0134 0.0648 0.637 Mono L1
ENSG00000166598 HSP90B1 -739217 sc-eQTL 9.54e-01 -0.00379 0.0649 0.637 Mono L1
ENSG00000204954 C12orf73 -774818 sc-eQTL 2.68e-01 -0.0923 0.0831 0.637 Mono L1
ENSG00000111727 HCFC2 -873641 sc-eQTL 3.95e-01 -0.0729 0.0856 0.637 NK L1
ENSG00000120837 NFYB -947351 sc-eQTL 6.27e-01 0.0384 0.079 0.637 NK L1
ENSG00000139372 TDG -774932 sc-eQTL 8.67e-01 0.0123 0.0736 0.637 NK L1
ENSG00000166598 HSP90B1 -739217 sc-eQTL 4.03e-01 -0.0681 0.0813 0.637 NK L1
ENSG00000204954 C12orf73 -774818 sc-eQTL 1.51e-01 0.117 0.0809 0.637 NK L1
ENSG00000017427 IGF1 709146 sc-eQTL 3.15e-01 -0.0308 0.0306 0.637 Other_T L1
ENSG00000111696 NT5DC3 -650344 sc-eQTL 2.59e-01 -0.0991 0.0876 0.637 Other_T L1
ENSG00000111727 HCFC2 -873641 sc-eQTL 4.32e-01 0.0704 0.0895 0.637 Other_T L1
ENSG00000120837 NFYB -947351 sc-eQTL 4.70e-01 0.0588 0.0811 0.637 Other_T L1
ENSG00000139372 TDG -774932 sc-eQTL 5.67e-01 -0.0447 0.078 0.637 Other_T L1
ENSG00000166598 HSP90B1 -739217 sc-eQTL 1.84e-02 -0.166 0.0698 0.637 Other_T L1
ENSG00000179088 C12orf42 -305120 sc-eQTL 5.74e-02 0.168 0.088 0.637 Other_T L1
ENSG00000204954 C12orf73 -774818 sc-eQTL 5.65e-01 0.0527 0.0913 0.637 Other_T L1
ENSG00000281344 HELLPAR 993305 sc-eQTL 3.69e-01 0.0651 0.0723 0.637 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 709146 sc-eQTL 6.34e-02 0.0355 0.019 0.638 B_Activated L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 2.61e-01 0.1 0.0889 0.638 B_Activated L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 1.86e-01 0.13 0.0976 0.638 B_Activated L2
ENSG00000120837 NFYB -947351 sc-eQTL 9.19e-01 -0.0108 0.106 0.638 B_Activated L2
ENSG00000139372 TDG -774932 sc-eQTL 9.63e-02 -0.175 0.105 0.638 B_Activated L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 9.02e-01 0.014 0.114 0.638 B_Activated L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 9.75e-01 0.00273 0.0872 0.638 B_Activated L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 6.28e-01 0.0464 0.0956 0.638 B_Activated L2
ENSG00000281344 HELLPAR 993305 sc-eQTL 9.36e-01 -0.00629 0.0777 0.638 B_Activated L2
ENSG00000017427 IGF1 709146 sc-eQTL 8.95e-02 0.0683 0.0401 0.635 B_Intermediate L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 3.01e-02 -0.196 0.0898 0.635 B_Intermediate L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 8.74e-01 0.0151 0.0949 0.635 B_Intermediate L2
ENSG00000120837 NFYB -947351 sc-eQTL 9.98e-01 -0.000272 0.101 0.635 B_Intermediate L2
ENSG00000139372 TDG -774932 sc-eQTL 9.45e-01 0.007 0.102 0.635 B_Intermediate L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 5.24e-01 0.0579 0.0907 0.635 B_Intermediate L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 2.37e-02 0.2 0.0876 0.635 B_Intermediate L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 8.07e-01 0.0235 0.096 0.635 B_Intermediate L2
ENSG00000281344 HELLPAR 993305 sc-eQTL 4.16e-04 -0.326 0.0908 0.635 B_Intermediate L2
ENSG00000017427 IGF1 709146 sc-eQTL 1.02e-01 0.0607 0.037 0.638 B_Memory L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 4.36e-01 -0.0731 0.0937 0.638 B_Memory L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 9.16e-01 -0.0107 0.101 0.638 B_Memory L2
ENSG00000120837 NFYB -947351 sc-eQTL 9.76e-01 0.00295 0.0999 0.638 B_Memory L2
ENSG00000139372 TDG -774932 sc-eQTL 6.16e-02 -0.19 0.101 0.638 B_Memory L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 7.62e-01 -0.0273 0.0901 0.638 B_Memory L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 2.09e-01 -0.117 0.0927 0.638 B_Memory L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 2.05e-01 0.126 0.0989 0.638 B_Memory L2
ENSG00000281344 HELLPAR 993305 sc-eQTL 8.39e-01 -0.0176 0.0862 0.638 B_Memory L2
ENSG00000017427 IGF1 709146 sc-eQTL 4.66e-01 -0.0372 0.0509 0.637 B_Naive1 L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 6.10e-01 0.0463 0.0906 0.637 B_Naive1 L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 8.49e-02 0.171 0.0986 0.637 B_Naive1 L2
ENSG00000120837 NFYB -947351 sc-eQTL 7.43e-01 -0.031 0.0944 0.637 B_Naive1 L2
ENSG00000139372 TDG -774932 sc-eQTL 8.74e-01 0.0139 0.0875 0.637 B_Naive1 L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 8.42e-02 -0.129 0.0741 0.637 B_Naive1 L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 5.07e-01 0.0642 0.0966 0.637 B_Naive1 L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 4.37e-01 -0.0744 0.0955 0.637 B_Naive1 L2
ENSG00000281344 HELLPAR 993305 sc-eQTL 8.18e-01 0.0211 0.0913 0.637 B_Naive1 L2
ENSG00000017427 IGF1 709146 sc-eQTL 5.81e-01 0.0248 0.045 0.637 B_Naive2 L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 9.85e-01 -0.00185 0.0964 0.637 B_Naive2 L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 9.60e-01 -0.00515 0.102 0.637 B_Naive2 L2
ENSG00000120837 NFYB -947351 sc-eQTL 5.23e-01 -0.0632 0.0988 0.637 B_Naive2 L2
ENSG00000139372 TDG -774932 sc-eQTL 5.53e-01 -0.0536 0.0902 0.637 B_Naive2 L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 3.77e-01 -0.0811 0.0915 0.637 B_Naive2 L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 1.87e-02 0.223 0.0941 0.637 B_Naive2 L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 8.25e-03 0.264 0.0988 0.637 B_Naive2 L2
ENSG00000281344 HELLPAR 993305 sc-eQTL 9.55e-01 0.00496 0.0879 0.637 B_Naive2 L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 3.98e-01 -0.0732 0.0865 0.639 CD4_CTL L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 2.55e-01 0.112 0.0981 0.639 CD4_CTL L2
ENSG00000120837 NFYB -947351 sc-eQTL 2.92e-01 0.103 0.0976 0.639 CD4_CTL L2
ENSG00000139372 TDG -774932 sc-eQTL 8.83e-01 0.0152 0.103 0.639 CD4_CTL L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 6.04e-01 -0.0453 0.0873 0.639 CD4_CTL L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 4.61e-01 0.0659 0.0892 0.639 CD4_CTL L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 2.14e-01 0.12 0.0963 0.639 CD4_CTL L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 8.95e-01 -0.0104 0.0785 0.637 CD4_Naive L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 7.64e-01 0.0246 0.0817 0.637 CD4_Naive L2
ENSG00000120837 NFYB -947351 sc-eQTL 7.91e-01 0.0186 0.0702 0.637 CD4_Naive L2
ENSG00000139372 TDG -774932 sc-eQTL 7.42e-01 -0.0234 0.071 0.637 CD4_Naive L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 9.50e-01 -0.00456 0.0724 0.637 CD4_Naive L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 3.83e-02 0.18 0.0862 0.637 CD4_Naive L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 5.05e-01 0.0529 0.0792 0.637 CD4_Naive L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 5.06e-01 -0.0601 0.0901 0.637 CD4_TCM L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 4.67e-01 0.0698 0.0958 0.637 CD4_TCM L2
ENSG00000120837 NFYB -947351 sc-eQTL 2.93e-01 0.0906 0.0859 0.637 CD4_TCM L2
ENSG00000139372 TDG -774932 sc-eQTL 1.57e-01 -0.11 0.0776 0.637 CD4_TCM L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 2.88e-01 0.0816 0.0766 0.637 CD4_TCM L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 6.97e-02 0.161 0.0885 0.637 CD4_TCM L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 6.25e-01 -0.0432 0.0881 0.637 CD4_TCM L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 3.02e-02 -0.207 0.0947 0.637 CD4_TEM L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 2.16e-01 0.121 0.0973 0.637 CD4_TEM L2
ENSG00000120837 NFYB -947351 sc-eQTL 2.83e-01 0.0999 0.0928 0.637 CD4_TEM L2
ENSG00000139372 TDG -774932 sc-eQTL 3.54e-01 -0.0855 0.092 0.637 CD4_TEM L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 8.06e-01 -0.0226 0.0916 0.637 CD4_TEM L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 5.51e-01 0.0569 0.0953 0.637 CD4_TEM L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 5.72e-01 -0.0522 0.0923 0.637 CD4_TEM L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 7.24e-01 0.0303 0.0857 0.637 CD8_CTL L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 1.73e-01 0.132 0.0962 0.637 CD8_CTL L2
ENSG00000120837 NFYB -947351 sc-eQTL 8.45e-01 -0.0178 0.0911 0.637 CD8_CTL L2
ENSG00000139372 TDG -774932 sc-eQTL 2.04e-01 0.115 0.0903 0.637 CD8_CTL L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 4.54e-01 -0.0596 0.0795 0.637 CD8_CTL L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 4.09e-01 -0.0773 0.0934 0.637 CD8_CTL L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 6.44e-01 0.04 0.0863 0.637 CD8_CTL L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 3.93e-01 -0.0753 0.088 0.637 CD8_Naive L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 1.80e-01 0.129 0.0963 0.637 CD8_Naive L2
ENSG00000120837 NFYB -947351 sc-eQTL 3.21e-01 0.0887 0.0892 0.637 CD8_Naive L2
ENSG00000139372 TDG -774932 sc-eQTL 1.44e-01 -0.117 0.0799 0.637 CD8_Naive L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 6.27e-02 -0.142 0.0758 0.637 CD8_Naive L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 6.25e-01 0.0447 0.0914 0.637 CD8_Naive L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 1.15e-01 -0.14 0.0882 0.637 CD8_Naive L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 5.84e-01 0.0472 0.0861 0.634 CD8_TCM L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 5.29e-01 0.0605 0.0958 0.634 CD8_TCM L2
ENSG00000120837 NFYB -947351 sc-eQTL 6.78e-01 -0.0401 0.0965 0.634 CD8_TCM L2
ENSG00000139372 TDG -774932 sc-eQTL 1.43e-01 -0.139 0.0946 0.634 CD8_TCM L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 1.40e-01 0.133 0.0901 0.634 CD8_TCM L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 8.41e-01 0.0179 0.0889 0.634 CD8_TCM L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 1.31e-01 0.149 0.0979 0.634 CD8_TCM L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 5.62e-01 0.0542 0.0933 0.637 CD8_TEM L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 5.39e-01 -0.0625 0.101 0.637 CD8_TEM L2
ENSG00000120837 NFYB -947351 sc-eQTL 3.33e-02 -0.205 0.0958 0.637 CD8_TEM L2
ENSG00000139372 TDG -774932 sc-eQTL 4.34e-01 -0.0813 0.104 0.637 CD8_TEM L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 9.30e-01 0.00856 0.0967 0.637 CD8_TEM L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 6.57e-01 -0.0432 0.0971 0.637 CD8_TEM L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 3.97e-01 0.0843 0.0993 0.637 CD8_TEM L2
ENSG00000017427 IGF1 709146 sc-eQTL 4.28e-02 -0.0676 0.0331 0.636 MAIT L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 1.89e-01 -0.123 0.093 0.636 MAIT L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 4.96e-01 -0.0652 0.0956 0.636 MAIT L2
ENSG00000120837 NFYB -947351 sc-eQTL 3.80e-01 0.0817 0.0929 0.636 MAIT L2
ENSG00000139372 TDG -774932 sc-eQTL 8.28e-01 -0.0219 0.101 0.636 MAIT L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 8.87e-02 -0.166 0.097 0.636 MAIT L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 5.45e-02 0.168 0.0869 0.636 MAIT L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 2.46e-02 0.22 0.0973 0.636 MAIT L2
ENSG00000281344 HELLPAR 993305 sc-eQTL 5.49e-01 -0.0487 0.0811 0.636 MAIT L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 8.71e-01 0.0156 0.0958 0.638 NK_CD56bright L2
ENSG00000120837 NFYB -947351 sc-eQTL 7.77e-01 -0.0275 0.097 0.638 NK_CD56bright L2
ENSG00000139372 TDG -774932 sc-eQTL 6.24e-01 -0.0485 0.0986 0.638 NK_CD56bright L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 3.76e-01 -0.0864 0.0973 0.638 NK_CD56bright L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 6.55e-01 0.0462 0.103 0.638 NK_CD56bright L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 4.01e-01 -0.08 0.0951 0.638 NK_CD56dim L2
ENSG00000120837 NFYB -947351 sc-eQTL 1.96e-01 0.11 0.0847 0.638 NK_CD56dim L2
ENSG00000139372 TDG -774932 sc-eQTL 9.56e-01 0.00441 0.0807 0.638 NK_CD56dim L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 2.87e-01 -0.0861 0.0806 0.638 NK_CD56dim L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 4.07e-01 0.0768 0.0926 0.638 NK_CD56dim L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 9.82e-01 0.00229 0.102 0.637 NK_HLA L2
ENSG00000120837 NFYB -947351 sc-eQTL 7.30e-01 0.0359 0.104 0.637 NK_HLA L2
ENSG00000139372 TDG -774932 sc-eQTL 6.61e-01 -0.0449 0.102 0.637 NK_HLA L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 2.09e-01 -0.126 0.1 0.637 NK_HLA L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 6.77e-01 -0.0388 0.0929 0.637 NK_HLA L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 6.73e-01 -0.0419 0.0992 0.638 NK_cytokine L2
ENSG00000120837 NFYB -947351 sc-eQTL 2.94e-01 -0.0903 0.0859 0.638 NK_cytokine L2
ENSG00000139372 TDG -774932 sc-eQTL 1.46e-01 -0.128 0.0875 0.638 NK_cytokine L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 3.50e-01 -0.0816 0.0872 0.638 NK_cytokine L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 1.56e-01 0.129 0.0909 0.638 NK_cytokine L2
ENSG00000017427 IGF1 709146 sc-eQTL 3.43e-01 0.0709 0.0743 0.622 PB L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 3.63e-01 0.107 0.117 0.622 PB L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 5.55e-01 -0.0592 0.1 0.622 PB L2
ENSG00000120837 NFYB -947351 sc-eQTL 2.83e-01 0.125 0.116 0.622 PB L2
ENSG00000139372 TDG -774932 sc-eQTL 8.03e-01 -0.0298 0.119 0.622 PB L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 1.99e-02 0.126 0.0536 0.622 PB L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 1.27e-01 -0.146 0.095 0.622 PB L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 1.66e-01 -0.165 0.119 0.622 PB L2
ENSG00000281344 HELLPAR 993305 sc-eQTL 2.14e-01 0.113 0.0906 0.622 PB L2
ENSG00000017427 IGF1 709146 sc-eQTL 8.73e-01 -0.00529 0.0331 0.635 Pro_T L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 6.57e-01 -0.0369 0.0829 0.635 Pro_T L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 2.97e-01 0.094 0.0899 0.635 Pro_T L2
ENSG00000120837 NFYB -947351 sc-eQTL 7.94e-01 0.0244 0.0932 0.635 Pro_T L2
ENSG00000139372 TDG -774932 sc-eQTL 9.74e-01 0.00288 0.0883 0.635 Pro_T L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 7.19e-01 -0.0222 0.0618 0.635 Pro_T L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 6.98e-01 0.0329 0.0848 0.635 Pro_T L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 7.84e-01 -0.0239 0.0872 0.635 Pro_T L2
ENSG00000281344 HELLPAR 993305 sc-eQTL 6.57e-01 -0.0296 0.0667 0.635 Pro_T L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 2.04e-01 -0.113 0.0885 0.637 Treg L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 5.95e-01 -0.0542 0.102 0.637 Treg L2
ENSG00000120837 NFYB -947351 sc-eQTL 8.39e-01 0.0184 0.0904 0.637 Treg L2
ENSG00000139372 TDG -774932 sc-eQTL 5.12e-02 -0.194 0.099 0.637 Treg L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 8.73e-01 -0.0148 0.0924 0.637 Treg L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 4.13e-01 0.0649 0.0792 0.637 Treg L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 4.17e-02 -0.202 0.0987 0.637 Treg L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 9.95e-01 0.000651 0.108 0.644 cDC L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 3.29e-01 -0.0919 0.094 0.644 cDC L2
ENSG00000120837 NFYB -947351 sc-eQTL 1.27e-01 -0.154 0.1 0.644 cDC L2
ENSG00000139372 TDG -774932 sc-eQTL 6.31e-01 0.0499 0.104 0.644 cDC L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 8.24e-01 0.0205 0.0919 0.644 cDC L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 8.45e-01 0.0134 0.0685 0.644 cDC L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 3.84e-01 0.0833 0.0954 0.644 cDC L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 2.70e-01 -0.102 0.0919 0.637 cMono_IL1B L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 2.61e-01 0.106 0.0937 0.637 cMono_IL1B L2
ENSG00000120837 NFYB -947351 sc-eQTL 1.76e-01 -0.129 0.0954 0.637 cMono_IL1B L2
ENSG00000139372 TDG -774932 sc-eQTL 8.12e-01 -0.0175 0.0735 0.637 cMono_IL1B L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 6.30e-01 -0.0343 0.0711 0.637 cMono_IL1B L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 4.06e-01 -0.071 0.0852 0.637 cMono_IL1B L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 4.14e-01 -0.0773 0.0944 0.637 cMono_S100A L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 9.05e-01 0.0118 0.0986 0.637 cMono_S100A L2
ENSG00000120837 NFYB -947351 sc-eQTL 8.66e-02 0.157 0.091 0.637 cMono_S100A L2
ENSG00000139372 TDG -774932 sc-eQTL 4.05e-01 0.0702 0.0841 0.637 cMono_S100A L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 7.15e-01 0.0271 0.0741 0.637 cMono_S100A L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 8.43e-01 -0.0185 0.0935 0.637 cMono_S100A L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 9.66e-01 -0.00467 0.108 0.652 gdT L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 1.76e-01 0.152 0.111 0.652 gdT L2
ENSG00000120837 NFYB -947351 sc-eQTL 4.14e-01 -0.0877 0.107 0.652 gdT L2
ENSG00000139372 TDG -774932 sc-eQTL 8.16e-01 -0.0252 0.108 0.652 gdT L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 2.63e-02 -0.252 0.112 0.652 gdT L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 8.74e-01 0.0171 0.107 0.652 gdT L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 8.60e-01 -0.0192 0.109 0.652 gdT L2
ENSG00000281344 HELLPAR 993305 sc-eQTL 9.11e-01 0.0109 0.0979 0.652 gdT L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 5.22e-01 -0.0589 0.0919 0.636 intMono L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 2.48e-01 -0.112 0.097 0.636 intMono L2
ENSG00000120837 NFYB -947351 sc-eQTL 3.98e-01 0.0859 0.101 0.636 intMono L2
ENSG00000139372 TDG -774932 sc-eQTL 7.60e-01 -0.029 0.095 0.636 intMono L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 4.37e-01 0.066 0.0847 0.636 intMono L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 4.15e-01 -0.071 0.0868 0.636 intMono L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 9.13e-01 -0.0104 0.0949 0.636 ncMono L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 5.16e-01 0.0617 0.0949 0.636 ncMono L2
ENSG00000120837 NFYB -947351 sc-eQTL 9.60e-01 -0.00487 0.0958 0.636 ncMono L2
ENSG00000139372 TDG -774932 sc-eQTL 5.42e-01 -0.0568 0.0929 0.636 ncMono L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 4.91e-01 -0.057 0.0825 0.636 ncMono L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 8.17e-01 -0.0217 0.0934 0.636 ncMono L2
ENSG00000111696 NT5DC3 -650344 sc-eQTL 8.86e-02 -0.16 0.0937 0.63 pDC L2
ENSG00000111727 HCFC2 -873641 sc-eQTL 4.46e-01 -0.0817 0.107 0.63 pDC L2
ENSG00000120837 NFYB -947351 sc-eQTL 2.73e-02 0.245 0.11 0.63 pDC L2
ENSG00000139372 TDG -774932 sc-eQTL 4.40e-01 -0.0735 0.0949 0.63 pDC L2
ENSG00000166598 HSP90B1 -739217 sc-eQTL 4.09e-01 0.0614 0.0741 0.63 pDC L2
ENSG00000179088 C12orf42 -305120 sc-eQTL 9.87e-01 0.00154 0.0968 0.63 pDC L2
ENSG00000204954 C12orf73 -774818 sc-eQTL 2.27e-01 0.112 0.092 0.63 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 709146 sc-eQTL 1.62e-02 0.113 0.0465 0.637 B_Memory LOneK1K
ENSG00000111696 NT5DC3 -650344 sc-eQTL 1.93e-02 -0.215 0.0911 0.637 B_Memory LOneK1K
ENSG00000111727 HCFC2 -873641 sc-eQTL 9.72e-01 0.00349 0.0993 0.637 B_Memory LOneK1K
ENSG00000120837 NFYB -947351 sc-eQTL 8.21e-01 -0.0206 0.0909 0.637 B_Memory LOneK1K
ENSG00000139372 TDG -774932 sc-eQTL 2.99e-01 -0.0999 0.0959 0.637 B_Memory LOneK1K
ENSG00000166598 HSP90B1 -739217 sc-eQTL 7.28e-01 0.03 0.086 0.637 B_Memory LOneK1K
ENSG00000179088 C12orf42 -305120 sc-eQTL 3.86e-01 0.0639 0.0735 0.637 B_Memory LOneK1K
ENSG00000204954 C12orf73 -774818 sc-eQTL 4.44e-01 0.0765 0.0998 0.637 B_Memory LOneK1K
ENSG00000281344 HELLPAR 993305 sc-eQTL 4.25e-02 -0.197 0.0966 0.637 B_Memory LOneK1K
ENSG00000017427 IGF1 709146 sc-eQTL 9.83e-01 -0.00115 0.054 0.637 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -650344 sc-eQTL 6.82e-01 0.0373 0.0911 0.637 B_Naive LOneK1K
ENSG00000111727 HCFC2 -873641 sc-eQTL 2.60e-01 0.111 0.0981 0.637 B_Naive LOneK1K
ENSG00000120837 NFYB -947351 sc-eQTL 3.20e-01 -0.0892 0.0895 0.637 B_Naive LOneK1K
ENSG00000139372 TDG -774932 sc-eQTL 6.25e-01 0.041 0.0837 0.637 B_Naive LOneK1K
ENSG00000166598 HSP90B1 -739217 sc-eQTL 1.02e-01 -0.125 0.0761 0.637 B_Naive LOneK1K
ENSG00000179088 C12orf42 -305120 sc-eQTL 4.73e-02 0.186 0.0931 0.637 B_Naive LOneK1K
ENSG00000204954 C12orf73 -774818 sc-eQTL 3.55e-01 0.0903 0.0973 0.637 B_Naive LOneK1K
ENSG00000281344 HELLPAR 993305 sc-eQTL 7.33e-01 0.0313 0.0917 0.637 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -650344 sc-eQTL 2.33e-01 -0.114 0.0949 0.637 CD14_Mono LOneK1K
ENSG00000111727 HCFC2 -873641 sc-eQTL 4.07e-01 0.0809 0.0973 0.637 CD14_Mono LOneK1K
ENSG00000120837 NFYB -947351 sc-eQTL 4.34e-01 -0.0708 0.0902 0.637 CD14_Mono LOneK1K
ENSG00000139372 TDG -774932 sc-eQTL 5.04e-01 0.0452 0.0675 0.637 CD14_Mono LOneK1K
ENSG00000166598 HSP90B1 -739217 sc-eQTL 8.00e-01 0.0168 0.0663 0.637 CD14_Mono LOneK1K
ENSG00000204954 C12orf73 -774818 sc-eQTL 3.77e-01 -0.0744 0.0841 0.637 CD14_Mono LOneK1K
ENSG00000111696 NT5DC3 -650344 sc-eQTL 8.48e-01 0.0182 0.0949 0.636 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -873641 sc-eQTL 8.92e-01 0.0126 0.0929 0.636 CD16_Mono LOneK1K
ENSG00000120837 NFYB -947351 sc-eQTL 4.72e-01 -0.0657 0.0911 0.636 CD16_Mono LOneK1K
ENSG00000139372 TDG -774932 sc-eQTL 7.69e-01 -0.026 0.0883 0.636 CD16_Mono LOneK1K
ENSG00000166598 HSP90B1 -739217 sc-eQTL 9.20e-01 -0.00885 0.0882 0.636 CD16_Mono LOneK1K
ENSG00000204954 C12orf73 -774818 sc-eQTL 5.46e-01 -0.0549 0.0908 0.636 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -873641 sc-eQTL 4.18e-01 -0.0722 0.0889 0.638 NK_CD56dim LOneK1K
ENSG00000120837 NFYB -947351 sc-eQTL 6.79e-01 0.0325 0.0785 0.638 NK_CD56dim LOneK1K
ENSG00000139372 TDG -774932 sc-eQTL 9.37e-01 -0.00612 0.0774 0.638 NK_CD56dim LOneK1K
ENSG00000166598 HSP90B1 -739217 sc-eQTL 3.56e-01 -0.0752 0.0813 0.638 NK_CD56dim LOneK1K
ENSG00000204954 C12orf73 -774818 sc-eQTL 2.76e-01 0.0932 0.0853 0.638 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136011 STAB2 -396383 pQTL 0.00819 -0.0608 0.023 0.0 0.0 0.366
ENSG00000179088 C12orf42 -305120 eQTL 0.00704 0.0524 0.0194 0.0 0.0 0.365

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina