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Genes within 1Mb (chr12:103182009:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 700265 sc-eQTL 7.02e-01 0.0154 0.0402 0.368 B L1
ENSG00000111696 NT5DC3 -659225 sc-eQTL 1.66e-01 -0.122 0.0877 0.368 B L1
ENSG00000111727 HCFC2 -882522 sc-eQTL 1.85e-01 0.109 0.0818 0.368 B L1
ENSG00000120837 NFYB -956232 sc-eQTL 6.44e-01 0.0366 0.0792 0.368 B L1
ENSG00000139372 TDG -783813 sc-eQTL 8.72e-01 -0.0128 0.0791 0.368 B L1
ENSG00000166598 HSP90B1 -748098 sc-eQTL 2.95e-01 0.052 0.0495 0.368 B L1
ENSG00000179088 C12orf42 -314001 sc-eQTL 2.55e-01 0.0843 0.0739 0.368 B L1
ENSG00000204954 C12orf73 -783699 sc-eQTL 2.01e-01 0.109 0.085 0.368 B L1
ENSG00000281344 HELLPAR 984424 sc-eQTL 4.93e-01 -0.0531 0.0774 0.368 B L1
ENSG00000111696 NT5DC3 -659225 sc-eQTL 7.30e-01 -0.026 0.0751 0.368 CD4T L1
ENSG00000111727 HCFC2 -882522 sc-eQTL 5.73e-01 -0.0426 0.0754 0.368 CD4T L1
ENSG00000120837 NFYB -956232 sc-eQTL 7.26e-01 -0.0228 0.0649 0.368 CD4T L1
ENSG00000139372 TDG -783813 sc-eQTL 5.01e-01 -0.045 0.0668 0.368 CD4T L1
ENSG00000166598 HSP90B1 -748098 sc-eQTL 5.22e-01 0.0463 0.0722 0.368 CD4T L1
ENSG00000179088 C12orf42 -314001 sc-eQTL 1.18e-01 0.13 0.0828 0.368 CD4T L1
ENSG00000204954 C12orf73 -783699 sc-eQTL 6.60e-01 -0.0316 0.0717 0.368 CD4T L1
ENSG00000111696 NT5DC3 -659225 sc-eQTL 4.95e-01 0.0525 0.0767 0.368 CD8T L1
ENSG00000111727 HCFC2 -882522 sc-eQTL 7.20e-01 -0.0298 0.083 0.368 CD8T L1
ENSG00000120837 NFYB -956232 sc-eQTL 5.25e-01 -0.0496 0.0779 0.368 CD8T L1
ENSG00000139372 TDG -783813 sc-eQTL 5.73e-01 0.0396 0.0701 0.368 CD8T L1
ENSG00000166598 HSP90B1 -748098 sc-eQTL 7.03e-01 0.0284 0.0743 0.368 CD8T L1
ENSG00000179088 C12orf42 -314001 sc-eQTL 8.90e-01 0.0124 0.0898 0.368 CD8T L1
ENSG00000204954 C12orf73 -783699 sc-eQTL 2.87e-01 0.0911 0.0853 0.368 CD8T L1
ENSG00000111696 NT5DC3 -659225 sc-eQTL 9.19e-01 0.00947 0.093 0.372 DC L1
ENSG00000111727 HCFC2 -882522 sc-eQTL 7.53e-02 -0.177 0.0989 0.372 DC L1
ENSG00000120837 NFYB -956232 sc-eQTL 2.00e-01 -0.114 0.089 0.372 DC L1
ENSG00000139372 TDG -783813 sc-eQTL 9.95e-01 -0.000553 0.0913 0.372 DC L1
ENSG00000166598 HSP90B1 -748098 sc-eQTL 5.84e-01 0.0328 0.0599 0.372 DC L1
ENSG00000179088 C12orf42 -314001 sc-eQTL 7.30e-01 0.0271 0.0785 0.372 DC L1
ENSG00000204954 C12orf73 -783699 sc-eQTL 5.02e-01 -0.0635 0.0944 0.372 DC L1
ENSG00000111696 NT5DC3 -659225 sc-eQTL 3.73e-01 0.0862 0.0966 0.368 Mono L1
ENSG00000111727 HCFC2 -882522 sc-eQTL 9.37e-01 -0.00706 0.0891 0.368 Mono L1
ENSG00000120837 NFYB -956232 sc-eQTL 2.62e-01 -0.0934 0.0831 0.368 Mono L1
ENSG00000139372 TDG -783813 sc-eQTL 8.35e-01 -0.0133 0.064 0.368 Mono L1
ENSG00000166598 HSP90B1 -748098 sc-eQTL 6.82e-01 -0.0262 0.064 0.368 Mono L1
ENSG00000204954 C12orf73 -783699 sc-eQTL 8.99e-01 -0.0105 0.0822 0.368 Mono L1
ENSG00000111727 HCFC2 -882522 sc-eQTL 2.00e-01 -0.11 0.0853 0.367 NK L1
ENSG00000120837 NFYB -956232 sc-eQTL 1.68e-01 -0.109 0.0786 0.367 NK L1
ENSG00000139372 TDG -783813 sc-eQTL 9.19e-01 0.00752 0.0735 0.367 NK L1
ENSG00000166598 HSP90B1 -748098 sc-eQTL 8.84e-01 -0.0118 0.0813 0.367 NK L1
ENSG00000204954 C12orf73 -783699 sc-eQTL 6.44e-02 0.15 0.0805 0.367 NK L1
ENSG00000017427 IGF1 700265 sc-eQTL 9.10e-01 -0.00344 0.0304 0.368 Other_T L1
ENSG00000111696 NT5DC3 -659225 sc-eQTL 3.14e-01 -0.0875 0.0868 0.368 Other_T L1
ENSG00000111727 HCFC2 -882522 sc-eQTL 2.37e-01 0.105 0.0884 0.368 Other_T L1
ENSG00000120837 NFYB -956232 sc-eQTL 8.18e-01 -0.0185 0.0804 0.368 Other_T L1
ENSG00000139372 TDG -783813 sc-eQTL 6.47e-01 0.0354 0.0772 0.368 Other_T L1
ENSG00000166598 HSP90B1 -748098 sc-eQTL 2.61e-01 -0.0786 0.0698 0.368 Other_T L1
ENSG00000179088 C12orf42 -314001 sc-eQTL 3.58e-01 0.0808 0.0877 0.368 Other_T L1
ENSG00000204954 C12orf73 -783699 sc-eQTL 8.29e-02 0.157 0.0898 0.368 Other_T L1
ENSG00000281344 HELLPAR 984424 sc-eQTL 8.41e-01 0.0144 0.0717 0.368 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 700265 sc-eQTL 2.94e-01 0.0205 0.0195 0.375 B_Activated L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 3.33e-01 0.0878 0.0904 0.375 B_Activated L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 8.01e-01 -0.0252 0.0997 0.375 B_Activated L2
ENSG00000120837 NFYB -956232 sc-eQTL 8.00e-01 0.0273 0.108 0.375 B_Activated L2
ENSG00000139372 TDG -783813 sc-eQTL 1.17e-01 -0.168 0.107 0.375 B_Activated L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 4.23e-01 0.0931 0.116 0.375 B_Activated L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 7.44e-01 -0.0289 0.0886 0.375 B_Activated L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 9.15e-01 -0.0104 0.0973 0.375 B_Activated L2
ENSG00000281344 HELLPAR 984424 sc-eQTL 4.48e-01 -0.0599 0.0788 0.375 B_Activated L2
ENSG00000017427 IGF1 700265 sc-eQTL 1.58e-01 0.0583 0.0411 0.365 B_Intermediate L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 2.93e-01 -0.0978 0.0928 0.365 B_Intermediate L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 8.57e-01 -0.0176 0.0973 0.365 B_Intermediate L2
ENSG00000120837 NFYB -956232 sc-eQTL 2.79e-01 0.112 0.103 0.365 B_Intermediate L2
ENSG00000139372 TDG -783813 sc-eQTL 9.33e-01 -0.00871 0.104 0.365 B_Intermediate L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 6.30e-02 0.173 0.0923 0.365 B_Intermediate L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 8.43e-01 -0.018 0.0909 0.365 B_Intermediate L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 2.75e-01 0.107 0.0981 0.365 B_Intermediate L2
ENSG00000281344 HELLPAR 984424 sc-eQTL 2.07e-02 -0.221 0.0946 0.365 B_Intermediate L2
ENSG00000017427 IGF1 700265 sc-eQTL 9.04e-01 -0.00447 0.0371 0.371 B_Memory L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 9.10e-01 -0.0107 0.0936 0.371 B_Memory L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 8.11e-01 -0.0242 0.101 0.371 B_Memory L2
ENSG00000120837 NFYB -956232 sc-eQTL 7.43e-01 0.0327 0.0996 0.371 B_Memory L2
ENSG00000139372 TDG -783813 sc-eQTL 9.89e-01 0.00143 0.102 0.371 B_Memory L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 1.62e-01 0.126 0.0895 0.371 B_Memory L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 7.43e-01 -0.0305 0.0928 0.371 B_Memory L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 7.06e-01 0.0374 0.099 0.371 B_Memory L2
ENSG00000281344 HELLPAR 984424 sc-eQTL 6.02e-01 -0.0449 0.086 0.371 B_Memory L2
ENSG00000017427 IGF1 700265 sc-eQTL 8.40e-01 0.0103 0.0508 0.368 B_Naive1 L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 4.35e-01 -0.0706 0.0902 0.368 B_Naive1 L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 1.54e-02 0.238 0.0977 0.368 B_Naive1 L2
ENSG00000120837 NFYB -956232 sc-eQTL 2.15e-01 -0.117 0.0938 0.368 B_Naive1 L2
ENSG00000139372 TDG -783813 sc-eQTL 5.07e-01 0.0579 0.0872 0.368 B_Naive1 L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 1.89e-01 0.0976 0.0741 0.368 B_Naive1 L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 6.11e-01 -0.0491 0.0964 0.368 B_Naive1 L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 4.09e-01 -0.0788 0.0951 0.368 B_Naive1 L2
ENSG00000281344 HELLPAR 984424 sc-eQTL 7.24e-01 -0.0322 0.091 0.368 B_Naive1 L2
ENSG00000017427 IGF1 700265 sc-eQTL 5.87e-01 0.0243 0.0446 0.369 B_Naive2 L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 7.74e-01 0.0275 0.0956 0.369 B_Naive2 L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 9.59e-01 -0.00521 0.101 0.369 B_Naive2 L2
ENSG00000120837 NFYB -956232 sc-eQTL 3.21e-01 0.0972 0.0978 0.369 B_Naive2 L2
ENSG00000139372 TDG -783813 sc-eQTL 1.43e-01 -0.131 0.0891 0.369 B_Naive2 L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 1.34e-01 0.136 0.0905 0.369 B_Naive2 L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 1.71e-01 0.129 0.0941 0.369 B_Naive2 L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 4.98e-03 0.277 0.0978 0.369 B_Naive2 L2
ENSG00000281344 HELLPAR 984424 sc-eQTL 3.19e-01 0.0869 0.0869 0.369 B_Naive2 L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 9.52e-03 -0.222 0.0849 0.377 CD4_CTL L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 1.21e-01 0.152 0.0974 0.377 CD4_CTL L2
ENSG00000120837 NFYB -956232 sc-eQTL 8.41e-01 -0.0196 0.0975 0.377 CD4_CTL L2
ENSG00000139372 TDG -783813 sc-eQTL 9.49e-02 0.171 0.102 0.377 CD4_CTL L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 6.22e-01 0.043 0.087 0.377 CD4_CTL L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 7.85e-01 0.0243 0.089 0.377 CD4_CTL L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 9.55e-01 0.0055 0.0963 0.377 CD4_CTL L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 9.03e-01 -0.00957 0.0782 0.368 CD4_Naive L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 9.78e-01 0.00224 0.0814 0.368 CD4_Naive L2
ENSG00000120837 NFYB -956232 sc-eQTL 7.45e-01 -0.0227 0.0699 0.368 CD4_Naive L2
ENSG00000139372 TDG -783813 sc-eQTL 5.03e-01 -0.0474 0.0706 0.368 CD4_Naive L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 6.74e-01 0.0304 0.0721 0.368 CD4_Naive L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 1.29e-01 0.131 0.0862 0.368 CD4_Naive L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 7.14e-01 0.029 0.0789 0.368 CD4_Naive L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 9.02e-01 -0.0112 0.0911 0.368 CD4_TCM L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 1.28e-01 -0.147 0.0964 0.368 CD4_TCM L2
ENSG00000120837 NFYB -956232 sc-eQTL 9.85e-01 -0.00162 0.087 0.368 CD4_TCM L2
ENSG00000139372 TDG -783813 sc-eQTL 4.90e-01 -0.0545 0.0787 0.368 CD4_TCM L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 3.17e-01 0.0777 0.0775 0.368 CD4_TCM L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 5.60e-01 0.0525 0.09 0.368 CD4_TCM L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 5.02e-01 0.0599 0.089 0.368 CD4_TCM L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 1.32e-01 -0.144 0.0953 0.368 CD4_TEM L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 6.25e-01 0.0478 0.0978 0.368 CD4_TEM L2
ENSG00000120837 NFYB -956232 sc-eQTL 1.38e-01 0.138 0.0927 0.368 CD4_TEM L2
ENSG00000139372 TDG -783813 sc-eQTL 1.00e+00 -4.74e-05 0.0924 0.368 CD4_TEM L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 6.38e-01 -0.0432 0.0917 0.368 CD4_TEM L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 3.39e-01 0.0913 0.0954 0.368 CD4_TEM L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 3.23e-01 -0.0915 0.0923 0.368 CD4_TEM L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 6.08e-01 0.0438 0.0853 0.368 CD8_CTL L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 9.64e-01 0.00435 0.0963 0.368 CD8_CTL L2
ENSG00000120837 NFYB -956232 sc-eQTL 3.30e-01 -0.0884 0.0906 0.368 CD8_CTL L2
ENSG00000139372 TDG -783813 sc-eQTL 4.29e-01 0.0715 0.0902 0.368 CD8_CTL L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 7.41e-01 -0.0262 0.0793 0.368 CD8_CTL L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 4.63e-01 -0.0685 0.0931 0.368 CD8_CTL L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 4.89e-02 0.169 0.0853 0.368 CD8_CTL L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 7.40e-01 -0.0296 0.089 0.368 CD8_Naive L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 5.16e-01 -0.0635 0.0976 0.368 CD8_Naive L2
ENSG00000120837 NFYB -956232 sc-eQTL 2.25e-01 -0.109 0.09 0.368 CD8_Naive L2
ENSG00000139372 TDG -783813 sc-eQTL 7.77e-01 0.023 0.0811 0.368 CD8_Naive L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 6.66e-01 -0.0333 0.0772 0.368 CD8_Naive L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 9.14e-01 -0.00999 0.0924 0.368 CD8_Naive L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 7.35e-01 -0.0303 0.0896 0.368 CD8_Naive L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 2.34e-01 0.104 0.0868 0.373 CD8_TCM L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 5.88e-01 0.0526 0.0969 0.373 CD8_TCM L2
ENSG00000120837 NFYB -956232 sc-eQTL 8.61e-01 0.0171 0.0976 0.373 CD8_TCM L2
ENSG00000139372 TDG -783813 sc-eQTL 5.90e-01 -0.0519 0.0961 0.373 CD8_TCM L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 4.73e-01 0.0657 0.0914 0.373 CD8_TCM L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 5.53e-01 0.0534 0.0898 0.373 CD8_TCM L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 5.87e-01 0.0542 0.0995 0.373 CD8_TCM L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 2.19e-01 0.112 0.0911 0.37 CD8_TEM L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 2.07e-01 -0.125 0.099 0.37 CD8_TEM L2
ENSG00000120837 NFYB -956232 sc-eQTL 8.35e-01 -0.0198 0.0949 0.37 CD8_TEM L2
ENSG00000139372 TDG -783813 sc-eQTL 2.08e-01 -0.128 0.101 0.37 CD8_TEM L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 4.58e-01 0.0704 0.0946 0.37 CD8_TEM L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 9.60e-01 0.0048 0.0951 0.37 CD8_TEM L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 1.87e-01 0.128 0.097 0.37 CD8_TEM L2
ENSG00000017427 IGF1 700265 sc-eQTL 9.58e-01 -0.00174 0.033 0.37 MAIT L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 2.77e-01 -0.1 0.092 0.37 MAIT L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 5.80e-01 0.0524 0.0944 0.37 MAIT L2
ENSG00000120837 NFYB -956232 sc-eQTL 8.40e-01 -0.0186 0.0919 0.37 MAIT L2
ENSG00000139372 TDG -783813 sc-eQTL 2.45e-01 0.115 0.0991 0.37 MAIT L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 2.39e-01 -0.114 0.0961 0.37 MAIT L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 2.53e-01 0.0989 0.0863 0.37 MAIT L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 1.03e-01 0.158 0.0967 0.37 MAIT L2
ENSG00000281344 HELLPAR 984424 sc-eQTL 7.85e-01 -0.0218 0.0801 0.37 MAIT L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 7.40e-01 0.031 0.0935 0.369 NK_CD56bright L2
ENSG00000120837 NFYB -956232 sc-eQTL 4.79e-01 -0.0671 0.0946 0.369 NK_CD56bright L2
ENSG00000139372 TDG -783813 sc-eQTL 4.44e-01 -0.0738 0.0962 0.369 NK_CD56bright L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 9.07e-01 0.0111 0.0952 0.369 NK_CD56bright L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 6.27e-01 -0.049 0.101 0.369 NK_CD56bright L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 3.00e-01 -0.099 0.0952 0.366 NK_CD56dim L2
ENSG00000120837 NFYB -956232 sc-eQTL 7.04e-01 -0.0324 0.0852 0.366 NK_CD56dim L2
ENSG00000139372 TDG -783813 sc-eQTL 8.41e-01 0.0163 0.0809 0.366 NK_CD56dim L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 4.55e-01 -0.0605 0.0809 0.366 NK_CD56dim L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 6.47e-02 0.171 0.0922 0.366 NK_CD56dim L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 4.74e-01 -0.0717 0.0998 0.37 NK_HLA L2
ENSG00000120837 NFYB -956232 sc-eQTL 6.01e-01 -0.0532 0.101 0.37 NK_HLA L2
ENSG00000139372 TDG -783813 sc-eQTL 7.81e-01 -0.0279 0.1 0.37 NK_HLA L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 3.57e-01 -0.0907 0.0982 0.37 NK_HLA L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 8.48e-01 -0.0175 0.091 0.37 NK_HLA L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 4.00e-01 -0.0818 0.0971 0.366 NK_cytokine L2
ENSG00000120837 NFYB -956232 sc-eQTL 6.93e-02 -0.153 0.0837 0.366 NK_cytokine L2
ENSG00000139372 TDG -783813 sc-eQTL 9.41e-01 -0.00643 0.0862 0.366 NK_cytokine L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 4.72e-01 0.0616 0.0855 0.366 NK_cytokine L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 1.03e-01 0.146 0.089 0.366 NK_cytokine L2
ENSG00000017427 IGF1 700265 sc-eQTL 1.90e-02 0.177 0.0742 0.337 PB L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 4.37e-01 -0.0928 0.119 0.337 PB L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 4.28e-01 -0.081 0.102 0.337 PB L2
ENSG00000120837 NFYB -956232 sc-eQTL 4.91e-01 0.0821 0.119 0.337 PB L2
ENSG00000139372 TDG -783813 sc-eQTL 2.93e-02 -0.262 0.119 0.337 PB L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 6.84e-02 0.101 0.0551 0.337 PB L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 7.28e-01 0.034 0.0978 0.337 PB L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 9.36e-01 0.00982 0.122 0.337 PB L2
ENSG00000281344 HELLPAR 984424 sc-eQTL 6.28e-02 0.172 0.0915 0.337 PB L2
ENSG00000017427 IGF1 700265 sc-eQTL 5.92e-01 0.0178 0.0331 0.37 Pro_T L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 5.29e-01 -0.0524 0.0831 0.37 Pro_T L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 6.42e-01 0.042 0.0903 0.37 Pro_T L2
ENSG00000120837 NFYB -956232 sc-eQTL 1.53e-01 -0.133 0.0929 0.37 Pro_T L2
ENSG00000139372 TDG -783813 sc-eQTL 2.47e-01 0.103 0.0882 0.37 Pro_T L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 8.91e-01 -0.00852 0.0619 0.37 Pro_T L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 6.39e-01 0.0399 0.0849 0.37 Pro_T L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 1.20e-01 0.136 0.0869 0.37 Pro_T L2
ENSG00000281344 HELLPAR 984424 sc-eQTL 5.43e-01 0.0407 0.0669 0.37 Pro_T L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 3.22e-01 0.0877 0.0884 0.368 Treg L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 2.01e-01 -0.13 0.101 0.368 Treg L2
ENSG00000120837 NFYB -956232 sc-eQTL 5.20e-01 -0.0581 0.0901 0.368 Treg L2
ENSG00000139372 TDG -783813 sc-eQTL 2.67e-01 -0.111 0.0994 0.368 Treg L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 9.46e-01 -0.00628 0.0922 0.368 Treg L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 6.65e-01 0.0342 0.0791 0.368 Treg L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 2.59e-02 -0.221 0.0983 0.368 Treg L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 9.97e-01 0.000402 0.105 0.373 cDC L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 2.84e-01 -0.098 0.0913 0.373 cDC L2
ENSG00000120837 NFYB -956232 sc-eQTL 2.42e-01 -0.115 0.0976 0.373 cDC L2
ENSG00000139372 TDG -783813 sc-eQTL 8.20e-01 0.023 0.101 0.373 cDC L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 4.73e-01 -0.0642 0.0892 0.373 cDC L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 6.05e-01 0.0345 0.0665 0.373 cDC L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 6.05e-01 0.0481 0.0929 0.373 cDC L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 2.56e-01 0.104 0.0909 0.368 cMono_IL1B L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 8.04e-01 0.0231 0.0929 0.368 cMono_IL1B L2
ENSG00000120837 NFYB -956232 sc-eQTL 4.08e-01 -0.0784 0.0946 0.368 cMono_IL1B L2
ENSG00000139372 TDG -783813 sc-eQTL 2.04e-01 -0.0922 0.0724 0.368 cMono_IL1B L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 3.26e-01 -0.0691 0.0702 0.368 cMono_IL1B L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 9.02e-01 0.0104 0.0844 0.368 cMono_IL1B L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 7.44e-01 0.0305 0.0931 0.368 cMono_S100A L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 5.27e-01 -0.0616 0.0971 0.368 cMono_S100A L2
ENSG00000120837 NFYB -956232 sc-eQTL 9.08e-01 -0.0105 0.0903 0.368 cMono_S100A L2
ENSG00000139372 TDG -783813 sc-eQTL 4.30e-01 0.0656 0.0829 0.368 cMono_S100A L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 2.47e-01 -0.0845 0.0728 0.368 cMono_S100A L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 9.01e-01 -0.0115 0.0922 0.368 cMono_S100A L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 8.50e-01 0.0199 0.105 0.397 gdT L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 2.60e-01 0.122 0.108 0.397 gdT L2
ENSG00000120837 NFYB -956232 sc-eQTL 3.30e-01 -0.101 0.103 0.397 gdT L2
ENSG00000139372 TDG -783813 sc-eQTL 8.79e-01 0.016 0.105 0.397 gdT L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 9.93e-02 -0.181 0.109 0.397 gdT L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 1.87e-01 -0.136 0.103 0.397 gdT L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 3.47e-01 0.0989 0.105 0.397 gdT L2
ENSG00000281344 HELLPAR 984424 sc-eQTL 2.31e-01 0.113 0.0941 0.397 gdT L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 8.23e-01 -0.0205 0.0917 0.367 intMono L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 6.08e-01 -0.0499 0.097 0.367 intMono L2
ENSG00000120837 NFYB -956232 sc-eQTL 5.80e-01 0.0562 0.101 0.367 intMono L2
ENSG00000139372 TDG -783813 sc-eQTL 9.24e-01 -0.009 0.0948 0.367 intMono L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 4.82e-01 0.0595 0.0845 0.367 intMono L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 6.29e-01 -0.0419 0.0867 0.367 intMono L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 6.98e-01 0.0363 0.0934 0.369 ncMono L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 1.96e-01 -0.121 0.0931 0.369 ncMono L2
ENSG00000120837 NFYB -956232 sc-eQTL 5.87e-01 -0.0513 0.0943 0.369 ncMono L2
ENSG00000139372 TDG -783813 sc-eQTL 2.35e-01 0.109 0.0912 0.369 ncMono L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 5.84e-01 0.0446 0.0813 0.369 ncMono L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 7.91e-01 0.0244 0.0919 0.369 ncMono L2
ENSG00000111696 NT5DC3 -659225 sc-eQTL 8.51e-01 -0.0172 0.0909 0.37 pDC L2
ENSG00000111727 HCFC2 -882522 sc-eQTL 4.79e-02 -0.203 0.102 0.37 pDC L2
ENSG00000120837 NFYB -956232 sc-eQTL 8.53e-01 -0.02 0.107 0.37 pDC L2
ENSG00000139372 TDG -783813 sc-eQTL 5.47e-01 0.0551 0.0913 0.37 pDC L2
ENSG00000166598 HSP90B1 -748098 sc-eQTL 5.15e-01 0.0466 0.0713 0.37 pDC L2
ENSG00000179088 C12orf42 -314001 sc-eQTL 2.88e-01 0.0988 0.0927 0.37 pDC L2
ENSG00000204954 C12orf73 -783699 sc-eQTL 1.82e-01 -0.118 0.0884 0.37 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 700265 sc-eQTL 2.51e-01 0.0543 0.0473 0.368 B_Memory LOneK1K
ENSG00000111696 NT5DC3 -659225 sc-eQTL 2.06e-01 -0.117 0.0924 0.368 B_Memory LOneK1K
ENSG00000111727 HCFC2 -882522 sc-eQTL 6.64e-01 -0.0434 0.0997 0.368 B_Memory LOneK1K
ENSG00000120837 NFYB -956232 sc-eQTL 1.36e-01 0.136 0.0909 0.368 B_Memory LOneK1K
ENSG00000139372 TDG -783813 sc-eQTL 6.58e-01 -0.0428 0.0966 0.368 B_Memory LOneK1K
ENSG00000166598 HSP90B1 -748098 sc-eQTL 2.94e-02 0.187 0.0855 0.368 B_Memory LOneK1K
ENSG00000179088 C12orf42 -314001 sc-eQTL 7.65e-01 -0.0221 0.074 0.368 B_Memory LOneK1K
ENSG00000204954 C12orf73 -783699 sc-eQTL 6.46e-01 0.0462 0.1 0.368 B_Memory LOneK1K
ENSG00000281344 HELLPAR 984424 sc-eQTL 1.04e-01 -0.159 0.0975 0.368 B_Memory LOneK1K
ENSG00000017427 IGF1 700265 sc-eQTL 7.09e-01 0.0201 0.0537 0.368 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -659225 sc-eQTL 5.19e-01 -0.0584 0.0904 0.368 B_Naive LOneK1K
ENSG00000111727 HCFC2 -882522 sc-eQTL 2.95e-02 0.212 0.0966 0.368 B_Naive LOneK1K
ENSG00000120837 NFYB -956232 sc-eQTL 6.14e-01 -0.045 0.0891 0.368 B_Naive LOneK1K
ENSG00000139372 TDG -783813 sc-eQTL 6.92e-01 0.033 0.0832 0.368 B_Naive LOneK1K
ENSG00000166598 HSP90B1 -748098 sc-eQTL 1.19e-01 0.119 0.0756 0.368 B_Naive LOneK1K
ENSG00000179088 C12orf42 -314001 sc-eQTL 4.89e-01 0.0646 0.0933 0.368 B_Naive LOneK1K
ENSG00000204954 C12orf73 -783699 sc-eQTL 3.04e-01 0.0997 0.0967 0.368 B_Naive LOneK1K
ENSG00000281344 HELLPAR 984424 sc-eQTL 6.80e-01 0.0376 0.0911 0.368 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -659225 sc-eQTL 2.53e-01 0.107 0.0936 0.368 CD14_Mono LOneK1K
ENSG00000111727 HCFC2 -882522 sc-eQTL 9.58e-01 0.00507 0.0961 0.368 CD14_Mono LOneK1K
ENSG00000120837 NFYB -956232 sc-eQTL 2.63e-01 -0.0996 0.0888 0.368 CD14_Mono LOneK1K
ENSG00000139372 TDG -783813 sc-eQTL 8.37e-01 -0.0138 0.0666 0.368 CD14_Mono LOneK1K
ENSG00000166598 HSP90B1 -748098 sc-eQTL 4.18e-01 -0.0529 0.0652 0.368 CD14_Mono LOneK1K
ENSG00000204954 C12orf73 -783699 sc-eQTL 9.57e-01 0.00445 0.0831 0.368 CD14_Mono LOneK1K
ENSG00000111696 NT5DC3 -659225 sc-eQTL 7.80e-01 0.0265 0.0945 0.364 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -882522 sc-eQTL 4.05e-01 -0.077 0.0923 0.364 CD16_Mono LOneK1K
ENSG00000120837 NFYB -956232 sc-eQTL 3.87e-01 -0.0786 0.0907 0.364 CD16_Mono LOneK1K
ENSG00000139372 TDG -783813 sc-eQTL 5.82e-01 0.0484 0.0879 0.364 CD16_Mono LOneK1K
ENSG00000166598 HSP90B1 -748098 sc-eQTL 4.20e-01 0.0709 0.0877 0.364 CD16_Mono LOneK1K
ENSG00000204954 C12orf73 -783699 sc-eQTL 8.76e-01 0.0141 0.0905 0.364 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -882522 sc-eQTL 1.41e-01 -0.131 0.0885 0.366 NK_CD56dim LOneK1K
ENSG00000120837 NFYB -956232 sc-eQTL 2.88e-01 -0.0834 0.0782 0.366 NK_CD56dim LOneK1K
ENSG00000139372 TDG -783813 sc-eQTL 6.47e-01 0.0354 0.0773 0.366 NK_CD56dim LOneK1K
ENSG00000166598 HSP90B1 -748098 sc-eQTL 7.50e-01 -0.0259 0.0814 0.366 NK_CD56dim LOneK1K
ENSG00000204954 C12orf73 -783699 sc-eQTL 6.32e-02 0.158 0.0848 0.366 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136011 STAB2 -405264 pQTL 0.0125 -0.0571 0.0229 0.0 0.0 0.383
ENSG00000214198 TTC41P -748202 eQTL 0.036 0.0824 0.0392 0.00105 0.0 0.385

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina