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Genes within 1Mb (chr12:103171269:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 689525 sc-eQTL 9.96e-01 -0.000213 0.0383 0.538 B L1
ENSG00000111696 NT5DC3 -669965 sc-eQTL 3.81e-02 -0.174 0.0832 0.538 B L1
ENSG00000111727 HCFC2 -893262 sc-eQTL 3.52e-01 0.0729 0.0781 0.538 B L1
ENSG00000120837 NFYB -966972 sc-eQTL 6.16e-01 -0.0379 0.0755 0.538 B L1
ENSG00000139372 TDG -794553 sc-eQTL 4.47e-01 -0.0573 0.0753 0.538 B L1
ENSG00000166598 HSP90B1 -758838 sc-eQTL 9.54e-01 0.00275 0.0473 0.538 B L1
ENSG00000179088 C12orf42 -324741 sc-eQTL 4.93e-01 0.0485 0.0706 0.538 B L1
ENSG00000204954 C12orf73 -794439 sc-eQTL 5.18e-01 0.0526 0.0813 0.538 B L1
ENSG00000281344 HELLPAR 973684 sc-eQTL 1.09e-01 -0.118 0.0734 0.538 B L1
ENSG00000111696 NT5DC3 -669965 sc-eQTL 9.05e-01 0.00856 0.0715 0.538 CD4T L1
ENSG00000111727 HCFC2 -893262 sc-eQTL 4.50e-01 -0.0543 0.0717 0.538 CD4T L1
ENSG00000120837 NFYB -966972 sc-eQTL 6.23e-01 -0.0304 0.0617 0.538 CD4T L1
ENSG00000139372 TDG -794553 sc-eQTL 5.96e-01 -0.0337 0.0635 0.538 CD4T L1
ENSG00000166598 HSP90B1 -758838 sc-eQTL 6.58e-01 0.0305 0.0687 0.538 CD4T L1
ENSG00000179088 C12orf42 -324741 sc-eQTL 1.04e-01 0.128 0.0787 0.538 CD4T L1
ENSG00000204954 C12orf73 -794439 sc-eQTL 8.37e-01 0.014 0.0682 0.538 CD4T L1
ENSG00000111696 NT5DC3 -669965 sc-eQTL 5.34e-01 0.045 0.0722 0.538 CD8T L1
ENSG00000111727 HCFC2 -893262 sc-eQTL 7.99e-01 -0.0199 0.0781 0.538 CD8T L1
ENSG00000120837 NFYB -966972 sc-eQTL 5.98e-01 -0.0387 0.0732 0.538 CD8T L1
ENSG00000139372 TDG -794553 sc-eQTL 7.72e-01 -0.0191 0.0659 0.538 CD8T L1
ENSG00000166598 HSP90B1 -758838 sc-eQTL 4.97e-01 0.0475 0.0698 0.538 CD8T L1
ENSG00000179088 C12orf42 -324741 sc-eQTL 5.35e-01 -0.0524 0.0844 0.538 CD8T L1
ENSG00000204954 C12orf73 -794439 sc-eQTL 5.32e-01 0.0503 0.0804 0.538 CD8T L1
ENSG00000111696 NT5DC3 -669965 sc-eQTL 8.32e-01 0.0187 0.0882 0.545 DC L1
ENSG00000111727 HCFC2 -893262 sc-eQTL 6.64e-02 -0.173 0.0937 0.545 DC L1
ENSG00000120837 NFYB -966972 sc-eQTL 4.48e-01 -0.0644 0.0846 0.545 DC L1
ENSG00000139372 TDG -794553 sc-eQTL 4.34e-01 0.0678 0.0865 0.545 DC L1
ENSG00000166598 HSP90B1 -758838 sc-eQTL 3.47e-01 0.0535 0.0568 0.545 DC L1
ENSG00000179088 C12orf42 -324741 sc-eQTL 7.98e-01 0.0191 0.0745 0.545 DC L1
ENSG00000204954 C12orf73 -794439 sc-eQTL 7.93e-01 0.0235 0.0896 0.545 DC L1
ENSG00000111696 NT5DC3 -669965 sc-eQTL 4.71e-01 -0.0664 0.0919 0.538 Mono L1
ENSG00000111727 HCFC2 -893262 sc-eQTL 6.91e-01 -0.0337 0.0847 0.538 Mono L1
ENSG00000120837 NFYB -966972 sc-eQTL 5.59e-01 -0.0464 0.0792 0.538 Mono L1
ENSG00000139372 TDG -794553 sc-eQTL 8.38e-01 -0.0124 0.0608 0.538 Mono L1
ENSG00000166598 HSP90B1 -758838 sc-eQTL 6.19e-01 0.0303 0.0608 0.538 Mono L1
ENSG00000204954 C12orf73 -794439 sc-eQTL 4.89e-02 -0.153 0.0775 0.538 Mono L1
ENSG00000111727 HCFC2 -893262 sc-eQTL 3.60e-01 -0.074 0.0807 0.539 NK L1
ENSG00000120837 NFYB -966972 sc-eQTL 6.95e-01 -0.0292 0.0746 0.539 NK L1
ENSG00000139372 TDG -794553 sc-eQTL 8.13e-01 -0.0164 0.0694 0.539 NK L1
ENSG00000166598 HSP90B1 -758838 sc-eQTL 9.68e-01 0.00304 0.0768 0.539 NK L1
ENSG00000204954 C12orf73 -794439 sc-eQTL 9.47e-04 0.251 0.0747 0.539 NK L1
ENSG00000017427 IGF1 689525 sc-eQTL 4.37e-01 -0.0226 0.029 0.538 Other_T L1
ENSG00000111696 NT5DC3 -669965 sc-eQTL 4.01e-01 -0.0699 0.0831 0.538 Other_T L1
ENSG00000111727 HCFC2 -893262 sc-eQTL 8.99e-01 0.0108 0.0848 0.538 Other_T L1
ENSG00000120837 NFYB -966972 sc-eQTL 8.83e-01 0.0113 0.0769 0.538 Other_T L1
ENSG00000139372 TDG -794553 sc-eQTL 8.98e-01 0.00948 0.0739 0.538 Other_T L1
ENSG00000166598 HSP90B1 -758838 sc-eQTL 4.11e-02 -0.136 0.0663 0.538 Other_T L1
ENSG00000179088 C12orf42 -324741 sc-eQTL 5.31e-01 0.0527 0.084 0.538 Other_T L1
ENSG00000204954 C12orf73 -794439 sc-eQTL 2.97e-02 0.187 0.0856 0.538 Other_T L1
ENSG00000281344 HELLPAR 973684 sc-eQTL 1.92e-01 0.0894 0.0684 0.538 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 689525 sc-eQTL 7.05e-02 0.0337 0.0185 0.554 B_Activated L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 2.22e-01 0.106 0.0865 0.554 B_Activated L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 5.40e-01 0.0586 0.0954 0.554 B_Activated L2
ENSG00000120837 NFYB -966972 sc-eQTL 2.27e-01 -0.124 0.103 0.554 B_Activated L2
ENSG00000139372 TDG -794553 sc-eQTL 4.73e-02 -0.203 0.102 0.554 B_Activated L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 7.28e-01 0.0387 0.111 0.554 B_Activated L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 5.96e-01 -0.045 0.0848 0.554 B_Activated L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 1.85e-01 -0.123 0.0927 0.554 B_Activated L2
ENSG00000281344 HELLPAR 973684 sc-eQTL 3.11e-01 -0.0766 0.0754 0.554 B_Activated L2
ENSG00000017427 IGF1 689525 sc-eQTL 2.10e-01 0.0489 0.0389 0.536 B_Intermediate L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 5.24e-02 -0.17 0.0872 0.536 B_Intermediate L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 9.34e-01 0.00764 0.092 0.536 B_Intermediate L2
ENSG00000120837 NFYB -966972 sc-eQTL 1.10e-01 0.156 0.0972 0.536 B_Intermediate L2
ENSG00000139372 TDG -794553 sc-eQTL 3.26e-01 -0.0966 0.0982 0.536 B_Intermediate L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 1.52e-01 0.126 0.0876 0.536 B_Intermediate L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 8.97e-01 0.0112 0.086 0.536 B_Intermediate L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 9.45e-01 0.00645 0.0931 0.536 B_Intermediate L2
ENSG00000281344 HELLPAR 973684 sc-eQTL 5.06e-03 -0.252 0.0889 0.536 B_Intermediate L2
ENSG00000017427 IGF1 689525 sc-eQTL 8.03e-01 -0.00892 0.0357 0.543 B_Memory L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 2.23e-01 -0.11 0.0897 0.543 B_Memory L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 8.50e-01 0.0184 0.097 0.543 B_Memory L2
ENSG00000120837 NFYB -966972 sc-eQTL 3.54e-01 0.0888 0.0956 0.543 B_Memory L2
ENSG00000139372 TDG -794553 sc-eQTL 1.58e-01 -0.138 0.0973 0.543 B_Memory L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 6.47e-01 0.0396 0.0864 0.543 B_Memory L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 3.43e-01 0.0846 0.089 0.543 B_Memory L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 7.37e-01 -0.032 0.0952 0.543 B_Memory L2
ENSG00000281344 HELLPAR 973684 sc-eQTL 7.06e-02 -0.149 0.082 0.543 B_Memory L2
ENSG00000017427 IGF1 689525 sc-eQTL 3.43e-01 -0.046 0.0484 0.538 B_Naive1 L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 3.03e-01 -0.0888 0.086 0.538 B_Naive1 L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 2.83e-01 0.101 0.0942 0.538 B_Naive1 L2
ENSG00000120837 NFYB -966972 sc-eQTL 6.73e-01 -0.038 0.0898 0.538 B_Naive1 L2
ENSG00000139372 TDG -794553 sc-eQTL 9.52e-01 -0.005 0.0832 0.538 B_Naive1 L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 9.91e-01 -0.000786 0.071 0.538 B_Naive1 L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 9.62e-01 -0.0044 0.092 0.538 B_Naive1 L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 3.20e-01 -0.0903 0.0907 0.538 B_Naive1 L2
ENSG00000281344 HELLPAR 973684 sc-eQTL 3.58e-01 -0.0798 0.0867 0.538 B_Naive1 L2
ENSG00000017427 IGF1 689525 sc-eQTL 9.38e-01 -0.00326 0.0421 0.541 B_Naive2 L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 6.89e-01 -0.0362 0.0902 0.541 B_Naive2 L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 7.49e-01 0.0305 0.0953 0.541 B_Naive2 L2
ENSG00000120837 NFYB -966972 sc-eQTL 2.16e-01 -0.114 0.0922 0.541 B_Naive2 L2
ENSG00000139372 TDG -794553 sc-eQTL 6.52e-02 -0.155 0.0839 0.541 B_Naive2 L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 8.81e-01 0.0128 0.0858 0.541 B_Naive2 L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 3.67e-01 0.0805 0.089 0.541 B_Naive2 L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 1.92e-02 0.219 0.0928 0.541 B_Naive2 L2
ENSG00000281344 HELLPAR 973684 sc-eQTL 9.69e-01 0.00316 0.0822 0.541 B_Naive2 L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 5.08e-01 -0.0546 0.0823 0.545 CD4_CTL L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 5.11e-02 0.182 0.0926 0.545 CD4_CTL L2
ENSG00000120837 NFYB -966972 sc-eQTL 8.64e-01 -0.016 0.0931 0.545 CD4_CTL L2
ENSG00000139372 TDG -794553 sc-eQTL 5.74e-01 0.0551 0.0978 0.545 CD4_CTL L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 1.83e-01 0.111 0.0827 0.545 CD4_CTL L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 7.24e-01 -0.03 0.0849 0.545 CD4_CTL L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 9.40e-01 -0.00693 0.0919 0.545 CD4_CTL L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 2.66e-01 0.0823 0.0738 0.538 CD4_Naive L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 1.36e-01 -0.115 0.0767 0.538 CD4_Naive L2
ENSG00000120837 NFYB -966972 sc-eQTL 4.52e-01 0.0498 0.0661 0.538 CD4_Naive L2
ENSG00000139372 TDG -794553 sc-eQTL 5.20e-01 -0.0431 0.0669 0.538 CD4_Naive L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 3.99e-01 0.0576 0.0682 0.538 CD4_Naive L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 6.29e-02 0.152 0.0814 0.538 CD4_Naive L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 2.63e-01 0.0836 0.0745 0.538 CD4_Naive L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 2.02e-01 -0.108 0.0847 0.538 CD4_TCM L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 3.86e-01 0.0784 0.0902 0.538 CD4_TCM L2
ENSG00000120837 NFYB -966972 sc-eQTL 5.85e-01 -0.0444 0.0811 0.538 CD4_TCM L2
ENSG00000139372 TDG -794553 sc-eQTL 4.13e-01 -0.0603 0.0734 0.538 CD4_TCM L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 8.32e-01 0.0154 0.0724 0.538 CD4_TCM L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 4.59e-01 0.0622 0.0839 0.538 CD4_TCM L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 7.27e-01 0.0291 0.0831 0.538 CD4_TCM L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 6.75e-02 -0.165 0.0898 0.538 CD4_TEM L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 1.91e-01 0.121 0.0919 0.538 CD4_TEM L2
ENSG00000120837 NFYB -966972 sc-eQTL 4.87e-01 0.0612 0.0879 0.538 CD4_TEM L2
ENSG00000139372 TDG -794553 sc-eQTL 8.12e-01 -0.0208 0.0872 0.538 CD4_TEM L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 6.64e-01 -0.0376 0.0866 0.538 CD4_TEM L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 7.25e-01 0.0318 0.0902 0.538 CD4_TEM L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 5.71e-01 -0.0495 0.0873 0.538 CD4_TEM L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 2.88e-01 0.0855 0.0803 0.538 CD8_CTL L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 9.81e-01 0.00218 0.0908 0.538 CD8_CTL L2
ENSG00000120837 NFYB -966972 sc-eQTL 6.26e-01 -0.0417 0.0856 0.538 CD8_CTL L2
ENSG00000139372 TDG -794553 sc-eQTL 8.12e-01 0.0203 0.0852 0.538 CD8_CTL L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 8.26e-01 0.0165 0.0748 0.538 CD8_CTL L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 4.27e-01 -0.0698 0.0878 0.538 CD8_CTL L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 1.44e-01 0.118 0.0807 0.538 CD8_CTL L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 8.17e-01 0.0193 0.0837 0.538 CD8_Naive L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 6.10e-01 -0.0469 0.0918 0.538 CD8_Naive L2
ENSG00000120837 NFYB -966972 sc-eQTL 6.00e-01 -0.0446 0.0848 0.538 CD8_Naive L2
ENSG00000139372 TDG -794553 sc-eQTL 1.01e-01 -0.125 0.0758 0.538 CD8_Naive L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 5.63e-01 -0.042 0.0725 0.538 CD8_Naive L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 8.55e-01 -0.0159 0.0868 0.538 CD8_Naive L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 5.83e-01 -0.0463 0.0842 0.538 CD8_Naive L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 2.69e-01 0.0918 0.0828 0.544 CD8_TCM L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 5.49e-01 0.0555 0.0924 0.544 CD8_TCM L2
ENSG00000120837 NFYB -966972 sc-eQTL 6.36e-01 -0.0441 0.093 0.544 CD8_TCM L2
ENSG00000139372 TDG -794553 sc-eQTL 1.07e-01 -0.147 0.0911 0.544 CD8_TCM L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 4.69e-01 0.0632 0.0872 0.544 CD8_TCM L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 1.46e-01 -0.125 0.0853 0.544 CD8_TCM L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 7.83e-01 -0.0262 0.0949 0.544 CD8_TCM L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 9.35e-01 -0.007 0.0857 0.537 CD8_TEM L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 8.01e-01 0.0235 0.0932 0.537 CD8_TEM L2
ENSG00000120837 NFYB -966972 sc-eQTL 8.61e-02 -0.152 0.0883 0.537 CD8_TEM L2
ENSG00000139372 TDG -794553 sc-eQTL 1.89e-01 -0.125 0.0949 0.537 CD8_TEM L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 9.13e-02 0.15 0.0882 0.537 CD8_TEM L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 4.77e-01 0.0634 0.0891 0.537 CD8_TEM L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 7.10e-02 0.165 0.0906 0.537 CD8_TEM L2
ENSG00000017427 IGF1 689525 sc-eQTL 7.56e-02 -0.0556 0.0311 0.541 MAIT L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 9.77e-01 -0.00251 0.0875 0.541 MAIT L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 7.66e-01 -0.0267 0.0897 0.541 MAIT L2
ENSG00000120837 NFYB -966972 sc-eQTL 5.31e-01 0.0547 0.0871 0.541 MAIT L2
ENSG00000139372 TDG -794553 sc-eQTL 8.86e-01 -0.0136 0.0943 0.541 MAIT L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 6.62e-01 -0.0401 0.0915 0.541 MAIT L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 5.26e-01 0.0521 0.0821 0.541 MAIT L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 2.37e-03 0.278 0.0903 0.541 MAIT L2
ENSG00000281344 HELLPAR 973684 sc-eQTL 7.54e-01 -0.0239 0.076 0.541 MAIT L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 1.38e-01 0.133 0.0893 0.542 NK_CD56bright L2
ENSG00000120837 NFYB -966972 sc-eQTL 6.66e-01 -0.0393 0.091 0.542 NK_CD56bright L2
ENSG00000139372 TDG -794553 sc-eQTL 7.03e-01 -0.0353 0.0925 0.542 NK_CD56bright L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 9.35e-01 0.00751 0.0914 0.542 NK_CD56bright L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 5.11e-01 0.0637 0.0967 0.542 NK_CD56bright L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 5.04e-01 -0.0599 0.0896 0.539 NK_CD56dim L2
ENSG00000120837 NFYB -966972 sc-eQTL 6.96e-01 0.0314 0.0801 0.539 NK_CD56dim L2
ENSG00000139372 TDG -794553 sc-eQTL 9.66e-01 -0.00327 0.076 0.539 NK_CD56dim L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 6.12e-01 -0.0386 0.0761 0.539 NK_CD56dim L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 7.33e-02 0.156 0.0867 0.539 NK_CD56dim L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 7.55e-01 0.0298 0.0954 0.532 NK_HLA L2
ENSG00000120837 NFYB -966972 sc-eQTL 6.63e-01 -0.0423 0.0969 0.532 NK_HLA L2
ENSG00000139372 TDG -794553 sc-eQTL 1.67e-01 -0.132 0.0953 0.532 NK_HLA L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 6.42e-01 -0.0438 0.0939 0.532 NK_HLA L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 7.63e-02 0.154 0.0863 0.532 NK_HLA L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 4.17e-01 -0.0753 0.0926 0.539 NK_cytokine L2
ENSG00000120837 NFYB -966972 sc-eQTL 1.89e-01 -0.106 0.0801 0.539 NK_cytokine L2
ENSG00000139372 TDG -794553 sc-eQTL 1.33e-01 -0.123 0.0817 0.539 NK_cytokine L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 7.94e-01 -0.0214 0.0816 0.539 NK_cytokine L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 2.37e-02 0.192 0.0843 0.539 NK_cytokine L2
ENSG00000017427 IGF1 689525 sc-eQTL 3.44e-01 0.0646 0.068 0.537 PB L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 9.36e-01 -0.00858 0.107 0.537 PB L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 6.28e-01 -0.0445 0.0916 0.537 PB L2
ENSG00000120837 NFYB -966972 sc-eQTL 7.33e-01 0.0365 0.107 0.537 PB L2
ENSG00000139372 TDG -794553 sc-eQTL 1.10e-01 -0.174 0.108 0.537 PB L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 2.90e-02 0.109 0.0491 0.537 PB L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 6.68e-01 -0.0378 0.0877 0.537 PB L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 6.77e-01 -0.0456 0.109 0.537 PB L2
ENSG00000281344 HELLPAR 973684 sc-eQTL 6.51e-01 0.0378 0.0833 0.537 PB L2
ENSG00000017427 IGF1 689525 sc-eQTL 7.21e-01 -0.0112 0.0313 0.541 Pro_T L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 7.39e-02 -0.14 0.0779 0.541 Pro_T L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 8.68e-01 0.0142 0.0852 0.541 Pro_T L2
ENSG00000120837 NFYB -966972 sc-eQTL 9.30e-01 -0.00775 0.0882 0.541 Pro_T L2
ENSG00000139372 TDG -794553 sc-eQTL 7.24e-02 0.15 0.0829 0.541 Pro_T L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 2.11e-01 -0.0731 0.0582 0.541 Pro_T L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 9.80e-01 0.00199 0.0802 0.541 Pro_T L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 1.76e-02 0.195 0.0814 0.541 Pro_T L2
ENSG00000281344 HELLPAR 973684 sc-eQTL 9.95e-01 0.000418 0.0632 0.541 Pro_T L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 8.38e-01 -0.017 0.0831 0.538 Treg L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 8.06e-02 -0.166 0.0946 0.538 Treg L2
ENSG00000120837 NFYB -966972 sc-eQTL 8.03e-01 -0.0211 0.0845 0.538 Treg L2
ENSG00000139372 TDG -794553 sc-eQTL 4.10e-01 -0.0771 0.0934 0.538 Treg L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 4.52e-01 -0.065 0.0863 0.538 Treg L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 7.20e-01 0.0267 0.0742 0.538 Treg L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 1.00e-02 -0.239 0.0918 0.538 Treg L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 6.27e-01 0.0482 0.099 0.554 cDC L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 2.08e-01 -0.109 0.0863 0.554 cDC L2
ENSG00000120837 NFYB -966972 sc-eQTL 4.37e-01 -0.0722 0.0926 0.554 cDC L2
ENSG00000139372 TDG -794553 sc-eQTL 1.19e-01 0.148 0.0947 0.554 cDC L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 3.94e-01 0.0721 0.0843 0.554 cDC L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 7.63e-01 0.019 0.063 0.554 cDC L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 4.19e-01 0.0712 0.0878 0.554 cDC L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 2.84e-01 -0.092 0.0857 0.538 cMono_IL1B L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 9.21e-01 0.0087 0.0876 0.538 cMono_IL1B L2
ENSG00000120837 NFYB -966972 sc-eQTL 9.99e-01 0.000149 0.0892 0.538 cMono_IL1B L2
ENSG00000139372 TDG -794553 sc-eQTL 5.38e-01 -0.0422 0.0684 0.538 cMono_IL1B L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 8.24e-01 0.0147 0.0662 0.538 cMono_IL1B L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 5.55e-01 -0.047 0.0794 0.538 cMono_IL1B L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 5.82e-01 -0.0488 0.0886 0.538 cMono_S100A L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 4.47e-01 -0.0704 0.0923 0.538 cMono_S100A L2
ENSG00000120837 NFYB -966972 sc-eQTL 6.33e-01 0.0411 0.0859 0.538 cMono_S100A L2
ENSG00000139372 TDG -794553 sc-eQTL 3.16e-01 0.0792 0.0788 0.538 cMono_S100A L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 7.12e-01 0.0257 0.0695 0.538 cMono_S100A L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 1.22e-01 -0.135 0.0872 0.538 cMono_S100A L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 3.39e-01 0.0971 0.101 0.548 gdT L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 2.22e-01 0.128 0.104 0.548 gdT L2
ENSG00000120837 NFYB -966972 sc-eQTL 8.00e-01 -0.0255 0.1 0.548 gdT L2
ENSG00000139372 TDG -794553 sc-eQTL 6.43e-01 -0.047 0.101 0.548 gdT L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 4.24e-01 -0.0854 0.107 0.548 gdT L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 4.34e-01 -0.0784 0.0999 0.548 gdT L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 2.71e-01 -0.112 0.101 0.548 gdT L2
ENSG00000281344 HELLPAR 973684 sc-eQTL 6.32e-01 0.0439 0.0915 0.548 gdT L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 2.12e-01 -0.108 0.0862 0.538 intMono L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 8.70e-02 -0.156 0.0909 0.538 intMono L2
ENSG00000120837 NFYB -966972 sc-eQTL 2.81e-01 0.103 0.0954 0.538 intMono L2
ENSG00000139372 TDG -794553 sc-eQTL 1.25e-01 -0.137 0.0889 0.538 intMono L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 2.63e-01 0.0893 0.0796 0.538 intMono L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 4.68e-01 -0.0595 0.0818 0.538 intMono L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 9.21e-01 0.00891 0.0893 0.541 ncMono L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 4.53e-01 -0.0672 0.0893 0.541 ncMono L2
ENSG00000120837 NFYB -966972 sc-eQTL 4.13e-01 0.074 0.0901 0.541 ncMono L2
ENSG00000139372 TDG -794553 sc-eQTL 8.50e-01 -0.0166 0.0876 0.541 ncMono L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 3.63e-01 0.0708 0.0776 0.541 ncMono L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 4.94e-01 -0.0602 0.0878 0.541 ncMono L2
ENSG00000111696 NT5DC3 -669965 sc-eQTL 4.78e-01 -0.0624 0.0877 0.545 pDC L2
ENSG00000111727 HCFC2 -893262 sc-eQTL 3.54e-01 -0.0923 0.0992 0.545 pDC L2
ENSG00000120837 NFYB -966972 sc-eQTL 9.22e-01 -0.0101 0.104 0.545 pDC L2
ENSG00000139372 TDG -794553 sc-eQTL 8.71e-01 -0.0144 0.0884 0.545 pDC L2
ENSG00000166598 HSP90B1 -758838 sc-eQTL 1.89e-01 0.0906 0.0687 0.545 pDC L2
ENSG00000179088 C12orf42 -324741 sc-eQTL 3.60e-01 0.0823 0.0897 0.545 pDC L2
ENSG00000204954 C12orf73 -794439 sc-eQTL 6.49e-01 -0.0391 0.0859 0.545 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 689525 sc-eQTL 2.76e-01 0.0492 0.0451 0.538 B_Memory LOneK1K
ENSG00000111696 NT5DC3 -669965 sc-eQTL 4.26e-02 -0.179 0.0876 0.538 B_Memory LOneK1K
ENSG00000111727 HCFC2 -893262 sc-eQTL 6.17e-01 0.0476 0.095 0.538 B_Memory LOneK1K
ENSG00000120837 NFYB -966972 sc-eQTL 1.13e-01 0.138 0.0866 0.538 B_Memory LOneK1K
ENSG00000139372 TDG -794553 sc-eQTL 1.58e-01 -0.13 0.0917 0.538 B_Memory LOneK1K
ENSG00000166598 HSP90B1 -758838 sc-eQTL 1.94e-01 0.107 0.0821 0.538 B_Memory LOneK1K
ENSG00000179088 C12orf42 -324741 sc-eQTL 8.64e-01 0.0121 0.0706 0.538 B_Memory LOneK1K
ENSG00000204954 C12orf73 -794439 sc-eQTL 3.81e-01 -0.0839 0.0955 0.538 B_Memory LOneK1K
ENSG00000281344 HELLPAR 973684 sc-eQTL 2.05e-02 -0.215 0.0923 0.538 B_Memory LOneK1K
ENSG00000017427 IGF1 689525 sc-eQTL 6.11e-01 -0.0261 0.0513 0.538 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -669965 sc-eQTL 3.09e-01 -0.0881 0.0864 0.538 B_Naive LOneK1K
ENSG00000111727 HCFC2 -893262 sc-eQTL 2.64e-01 0.104 0.0932 0.538 B_Naive LOneK1K
ENSG00000120837 NFYB -966972 sc-eQTL 1.77e-01 -0.115 0.085 0.538 B_Naive LOneK1K
ENSG00000139372 TDG -794553 sc-eQTL 6.83e-01 -0.0326 0.0796 0.538 B_Naive LOneK1K
ENSG00000166598 HSP90B1 -758838 sc-eQTL 9.59e-01 -0.00377 0.0728 0.538 B_Naive LOneK1K
ENSG00000179088 C12orf42 -324741 sc-eQTL 4.11e-01 0.0736 0.0892 0.538 B_Naive LOneK1K
ENSG00000204954 C12orf73 -794439 sc-eQTL 3.08e-01 0.0945 0.0925 0.538 B_Naive LOneK1K
ENSG00000281344 HELLPAR 973684 sc-eQTL 9.17e-01 0.00909 0.0872 0.538 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -669965 sc-eQTL 4.34e-01 -0.0698 0.0889 0.538 CD14_Mono LOneK1K
ENSG00000111727 HCFC2 -893262 sc-eQTL 7.98e-01 -0.0233 0.0911 0.538 CD14_Mono LOneK1K
ENSG00000120837 NFYB -966972 sc-eQTL 4.96e-01 -0.0576 0.0844 0.538 CD14_Mono LOneK1K
ENSG00000139372 TDG -794553 sc-eQTL 6.55e-01 0.0282 0.0631 0.538 CD14_Mono LOneK1K
ENSG00000166598 HSP90B1 -758838 sc-eQTL 5.56e-01 0.0366 0.0619 0.538 CD14_Mono LOneK1K
ENSG00000204954 C12orf73 -794439 sc-eQTL 1.12e-01 -0.125 0.0783 0.538 CD14_Mono LOneK1K
ENSG00000111696 NT5DC3 -669965 sc-eQTL 8.87e-01 -0.0128 0.09 0.537 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -893262 sc-eQTL 2.83e-01 -0.0945 0.0878 0.537 CD16_Mono LOneK1K
ENSG00000120837 NFYB -966972 sc-eQTL 7.09e-01 0.0323 0.0865 0.537 CD16_Mono LOneK1K
ENSG00000139372 TDG -794553 sc-eQTL 4.18e-01 -0.0679 0.0836 0.537 CD16_Mono LOneK1K
ENSG00000166598 HSP90B1 -758838 sc-eQTL 2.95e-01 0.0876 0.0834 0.537 CD16_Mono LOneK1K
ENSG00000204954 C12orf73 -794439 sc-eQTL 4.60e-01 -0.0636 0.086 0.537 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -893262 sc-eQTL 1.95e-01 -0.11 0.0843 0.539 NK_CD56dim LOneK1K
ENSG00000120837 NFYB -966972 sc-eQTL 6.47e-01 -0.0342 0.0746 0.539 NK_CD56dim LOneK1K
ENSG00000139372 TDG -794553 sc-eQTL 5.42e-01 -0.045 0.0735 0.539 NK_CD56dim LOneK1K
ENSG00000166598 HSP90B1 -758838 sc-eQTL 8.42e-01 -0.0155 0.0774 0.539 NK_CD56dim LOneK1K
ENSG00000204954 C12orf73 -794439 sc-eQTL 3.23e-03 0.237 0.0796 0.539 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000017427 IGF1 689525 eQTL 0.0446 0.0417 0.0207 0.0 0.0 0.469
ENSG00000111727 HCFC2 -893262 eQTL 0.0447 0.0291 0.0145 0.0 0.0 0.469
ENSG00000136011 STAB2 -416004 pQTL 0.00762 -0.0592 0.0222 0.0 0.0 0.47

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina