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Genes within 1Mb (chr12:103156153:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 674409 sc-eQTL 2.79e-01 -0.0408 0.0376 0.348 B L1
ENSG00000111696 NT5DC3 -685081 sc-eQTL 7.58e-01 0.0255 0.0827 0.348 B L1
ENSG00000111727 HCFC2 -908378 sc-eQTL 9.85e-01 -0.00149 0.0771 0.348 B L1
ENSG00000120837 NFYB -982088 sc-eQTL 3.52e-01 -0.0692 0.0742 0.348 B L1
ENSG00000139372 TDG -809669 sc-eQTL 6.39e-01 -0.0348 0.0742 0.348 B L1
ENSG00000166598 HSP90B1 -773954 sc-eQTL 7.75e-02 -0.082 0.0462 0.348 B L1
ENSG00000179088 C12orf42 -339857 sc-eQTL 5.80e-01 0.0385 0.0695 0.348 B L1
ENSG00000204954 C12orf73 -809555 sc-eQTL 4.20e-01 0.0646 0.08 0.348 B L1
ENSG00000281344 HELLPAR 958568 sc-eQTL 6.82e-02 -0.132 0.0721 0.348 B L1
ENSG00000111696 NT5DC3 -685081 sc-eQTL 7.36e-01 0.0239 0.0708 0.348 CD4T L1
ENSG00000111727 HCFC2 -908378 sc-eQTL 4.02e-01 -0.0596 0.071 0.348 CD4T L1
ENSG00000120837 NFYB -982088 sc-eQTL 1.27e-01 0.0931 0.0608 0.348 CD4T L1
ENSG00000139372 TDG -809669 sc-eQTL 9.01e-01 -0.0078 0.063 0.348 CD4T L1
ENSG00000166598 HSP90B1 -773954 sc-eQTL 6.65e-02 0.125 0.0675 0.348 CD4T L1
ENSG00000179088 C12orf42 -339857 sc-eQTL 6.21e-01 0.0388 0.0784 0.348 CD4T L1
ENSG00000204954 C12orf73 -809555 sc-eQTL 7.67e-01 0.02 0.0676 0.348 CD4T L1
ENSG00000111696 NT5DC3 -685081 sc-eQTL 2.69e-01 0.0806 0.0726 0.348 CD8T L1
ENSG00000111727 HCFC2 -908378 sc-eQTL 2.61e-01 -0.0884 0.0785 0.348 CD8T L1
ENSG00000120837 NFYB -982088 sc-eQTL 9.53e-01 -0.00433 0.0739 0.348 CD8T L1
ENSG00000139372 TDG -809669 sc-eQTL 7.78e-01 -0.0188 0.0665 0.348 CD8T L1
ENSG00000166598 HSP90B1 -773954 sc-eQTL 2.37e-01 0.0833 0.0702 0.348 CD8T L1
ENSG00000179088 C12orf42 -339857 sc-eQTL 1.60e-01 0.119 0.0847 0.348 CD8T L1
ENSG00000204954 C12orf73 -809555 sc-eQTL 8.60e-01 -0.0143 0.0811 0.348 CD8T L1
ENSG00000111696 NT5DC3 -685081 sc-eQTL 5.75e-01 0.0486 0.0866 0.358 DC L1
ENSG00000111727 HCFC2 -908378 sc-eQTL 6.27e-01 -0.0451 0.0929 0.358 DC L1
ENSG00000120837 NFYB -982088 sc-eQTL 6.83e-01 0.0341 0.0832 0.358 DC L1
ENSG00000139372 TDG -809669 sc-eQTL 5.85e-01 0.0465 0.085 0.358 DC L1
ENSG00000166598 HSP90B1 -773954 sc-eQTL 6.56e-01 -0.0249 0.0559 0.358 DC L1
ENSG00000179088 C12orf42 -339857 sc-eQTL 6.45e-01 0.0338 0.0732 0.358 DC L1
ENSG00000204954 C12orf73 -809555 sc-eQTL 8.46e-01 0.0172 0.0881 0.358 DC L1
ENSG00000111696 NT5DC3 -685081 sc-eQTL 3.28e-01 -0.0888 0.0905 0.348 Mono L1
ENSG00000111727 HCFC2 -908378 sc-eQTL 2.87e-01 -0.0889 0.0833 0.348 Mono L1
ENSG00000120837 NFYB -982088 sc-eQTL 2.71e-01 -0.086 0.0779 0.348 Mono L1
ENSG00000139372 TDG -809669 sc-eQTL 3.14e-01 0.0603 0.0598 0.348 Mono L1
ENSG00000166598 HSP90B1 -773954 sc-eQTL 1.88e-01 0.0788 0.0597 0.348 Mono L1
ENSG00000204954 C12orf73 -809555 sc-eQTL 9.56e-02 -0.128 0.0766 0.348 Mono L1
ENSG00000111727 HCFC2 -908378 sc-eQTL 9.86e-02 -0.134 0.0808 0.35 NK L1
ENSG00000120837 NFYB -982088 sc-eQTL 2.64e-01 0.0838 0.0748 0.35 NK L1
ENSG00000139372 TDG -809669 sc-eQTL 3.23e-01 -0.069 0.0696 0.35 NK L1
ENSG00000166598 HSP90B1 -773954 sc-eQTL 7.84e-01 0.0212 0.0772 0.35 NK L1
ENSG00000204954 C12orf73 -809555 sc-eQTL 2.64e-01 0.0861 0.0769 0.35 NK L1
ENSG00000017427 IGF1 674409 sc-eQTL 8.78e-01 0.00436 0.0283 0.348 Other_T L1
ENSG00000111696 NT5DC3 -685081 sc-eQTL 3.11e-01 -0.0822 0.0809 0.348 Other_T L1
ENSG00000111727 HCFC2 -908378 sc-eQTL 9.29e-01 0.0074 0.0827 0.348 Other_T L1
ENSG00000120837 NFYB -982088 sc-eQTL 9.32e-01 -0.00643 0.075 0.348 Other_T L1
ENSG00000139372 TDG -809669 sc-eQTL 8.73e-01 -0.0115 0.0721 0.348 Other_T L1
ENSG00000166598 HSP90B1 -773954 sc-eQTL 8.42e-01 -0.013 0.0653 0.348 Other_T L1
ENSG00000179088 C12orf42 -339857 sc-eQTL 6.96e-01 -0.0321 0.0819 0.348 Other_T L1
ENSG00000204954 C12orf73 -809555 sc-eQTL 1.23e-01 0.13 0.0839 0.348 Other_T L1
ENSG00000281344 HELLPAR 958568 sc-eQTL 5.10e-01 0.0441 0.0668 0.348 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 674409 sc-eQTL 1.98e-01 0.0231 0.0178 0.355 B_Activated L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 8.65e-01 0.0142 0.0833 0.355 B_Activated L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 9.12e-01 0.0102 0.0916 0.355 B_Activated L2
ENSG00000120837 NFYB -982088 sc-eQTL 5.24e-01 -0.063 0.0987 0.355 B_Activated L2
ENSG00000139372 TDG -809669 sc-eQTL 1.90e-01 -0.129 0.0982 0.355 B_Activated L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 5.11e-01 -0.0702 0.107 0.355 B_Activated L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 2.12e-02 -0.186 0.0802 0.355 B_Activated L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 1.55e-01 -0.127 0.0888 0.355 B_Activated L2
ENSG00000281344 HELLPAR 958568 sc-eQTL 4.72e-01 -0.0521 0.0724 0.355 B_Activated L2
ENSG00000017427 IGF1 674409 sc-eQTL 5.93e-01 0.0203 0.038 0.345 B_Intermediate L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 5.03e-01 0.0573 0.0855 0.345 B_Intermediate L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 7.85e-01 -0.0245 0.0895 0.345 B_Intermediate L2
ENSG00000120837 NFYB -982088 sc-eQTL 2.30e-01 0.114 0.0948 0.345 B_Intermediate L2
ENSG00000139372 TDG -809669 sc-eQTL 5.15e-01 -0.0624 0.0956 0.345 B_Intermediate L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 1.98e-01 0.11 0.0853 0.345 B_Intermediate L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 1.10e-01 0.134 0.0831 0.345 B_Intermediate L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 7.74e-01 -0.026 0.0905 0.345 B_Intermediate L2
ENSG00000281344 HELLPAR 958568 sc-eQTL 2.94e-01 -0.0925 0.0879 0.345 B_Intermediate L2
ENSG00000017427 IGF1 674409 sc-eQTL 7.25e-02 0.062 0.0343 0.351 B_Memory L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 8.28e-01 -0.019 0.0872 0.351 B_Memory L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 2.95e-01 0.0985 0.0938 0.351 B_Memory L2
ENSG00000120837 NFYB -982088 sc-eQTL 5.94e-01 0.0496 0.0928 0.351 B_Memory L2
ENSG00000139372 TDG -809669 sc-eQTL 4.05e-01 -0.079 0.0946 0.351 B_Memory L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 3.55e-01 -0.0776 0.0836 0.351 B_Memory L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 4.79e-01 0.0612 0.0864 0.351 B_Memory L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 2.83e-01 -0.099 0.0921 0.351 B_Memory L2
ENSG00000281344 HELLPAR 958568 sc-eQTL 9.60e-01 -0.004 0.0802 0.351 B_Memory L2
ENSG00000017427 IGF1 674409 sc-eQTL 7.21e-01 -0.0169 0.0472 0.348 B_Naive1 L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 1.77e-01 0.113 0.0836 0.348 B_Naive1 L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 5.74e-01 -0.0517 0.0919 0.348 B_Naive1 L2
ENSG00000120837 NFYB -982088 sc-eQTL 7.62e-01 -0.0266 0.0874 0.348 B_Naive1 L2
ENSG00000139372 TDG -809669 sc-eQTL 8.93e-01 0.0109 0.0811 0.348 B_Naive1 L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 5.79e-02 -0.131 0.0685 0.348 B_Naive1 L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 5.39e-01 0.055 0.0895 0.348 B_Naive1 L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 7.80e-01 0.0247 0.0885 0.348 B_Naive1 L2
ENSG00000281344 HELLPAR 958568 sc-eQTL 8.92e-01 0.0115 0.0846 0.348 B_Naive1 L2
ENSG00000017427 IGF1 674409 sc-eQTL 8.87e-01 -0.006 0.0422 0.35 B_Naive2 L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 7.66e-01 -0.027 0.0906 0.35 B_Naive2 L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 5.57e-01 0.0562 0.0956 0.35 B_Naive2 L2
ENSG00000120837 NFYB -982088 sc-eQTL 2.23e-02 -0.211 0.0917 0.35 B_Naive2 L2
ENSG00000139372 TDG -809669 sc-eQTL 4.80e-01 -0.06 0.0847 0.35 B_Naive2 L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 5.47e-01 -0.0519 0.086 0.35 B_Naive2 L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 7.62e-01 -0.0272 0.0895 0.35 B_Naive2 L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 1.43e-01 0.138 0.0939 0.35 B_Naive2 L2
ENSG00000281344 HELLPAR 958568 sc-eQTL 3.89e-01 -0.0711 0.0824 0.35 B_Naive2 L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 9.13e-01 0.00884 0.0807 0.345 CD4_CTL L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 4.07e-01 0.076 0.0914 0.345 CD4_CTL L2
ENSG00000120837 NFYB -982088 sc-eQTL 9.72e-01 -0.00324 0.0911 0.345 CD4_CTL L2
ENSG00000139372 TDG -809669 sc-eQTL 8.26e-01 -0.021 0.0958 0.345 CD4_CTL L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 1.80e-01 0.109 0.081 0.345 CD4_CTL L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 6.14e-01 0.042 0.0831 0.345 CD4_CTL L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 3.74e-01 -0.0799 0.0898 0.345 CD4_CTL L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 1.49e-01 0.106 0.0729 0.348 CD4_Naive L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 1.08e-01 -0.122 0.0758 0.348 CD4_Naive L2
ENSG00000120837 NFYB -982088 sc-eQTL 3.11e-02 0.141 0.0648 0.348 CD4_Naive L2
ENSG00000139372 TDG -809669 sc-eQTL 5.64e-01 -0.0382 0.0662 0.348 CD4_Naive L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 7.73e-02 0.119 0.0671 0.348 CD4_Naive L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 6.73e-01 0.0343 0.0812 0.348 CD4_Naive L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 4.71e-01 0.0533 0.0739 0.348 CD4_Naive L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 2.80e-01 -0.0922 0.0852 0.348 CD4_TCM L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 7.54e-01 0.0285 0.0908 0.348 CD4_TCM L2
ENSG00000120837 NFYB -982088 sc-eQTL 8.32e-01 0.0173 0.0816 0.348 CD4_TCM L2
ENSG00000139372 TDG -809669 sc-eQTL 5.24e-01 -0.0471 0.0738 0.348 CD4_TCM L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 6.84e-01 0.0296 0.0727 0.348 CD4_TCM L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 5.24e-01 -0.0538 0.0843 0.348 CD4_TCM L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 7.44e-01 0.0273 0.0835 0.348 CD4_TCM L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 2.27e-01 -0.11 0.0908 0.348 CD4_TEM L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 4.17e-01 0.0754 0.0928 0.348 CD4_TEM L2
ENSG00000120837 NFYB -982088 sc-eQTL 9.48e-01 0.0058 0.0885 0.348 CD4_TEM L2
ENSG00000139372 TDG -809669 sc-eQTL 5.29e-01 -0.0553 0.0877 0.348 CD4_TEM L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 5.54e-02 0.166 0.0864 0.348 CD4_TEM L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 9.02e-01 0.0112 0.0908 0.348 CD4_TEM L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 3.54e-01 0.0814 0.0877 0.348 CD4_TEM L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 4.34e-01 0.0634 0.0808 0.348 CD8_CTL L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 7.15e-01 -0.0333 0.0912 0.348 CD8_CTL L2
ENSG00000120837 NFYB -982088 sc-eQTL 1.28e-01 -0.131 0.0856 0.348 CD8_CTL L2
ENSG00000139372 TDG -809669 sc-eQTL 7.39e-01 -0.0286 0.0856 0.348 CD8_CTL L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 5.28e-01 0.0474 0.0751 0.348 CD8_CTL L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 8.22e-01 0.0198 0.0883 0.348 CD8_CTL L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 1.05e-01 0.132 0.081 0.348 CD8_CTL L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 4.81e-01 0.0597 0.0845 0.348 CD8_Naive L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 2.41e-01 -0.109 0.0925 0.348 CD8_Naive L2
ENSG00000120837 NFYB -982088 sc-eQTL 9.47e-01 0.00566 0.0859 0.348 CD8_Naive L2
ENSG00000139372 TDG -809669 sc-eQTL 6.93e-01 0.0305 0.0771 0.348 CD8_Naive L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 7.10e-01 0.0273 0.0734 0.348 CD8_Naive L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 1.80e-01 0.118 0.0874 0.348 CD8_Naive L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 5.58e-01 -0.0499 0.0851 0.348 CD8_Naive L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 7.22e-01 0.0295 0.0829 0.354 CD8_TCM L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 7.26e-01 0.0324 0.0923 0.354 CD8_TCM L2
ENSG00000120837 NFYB -982088 sc-eQTL 1.82e-01 0.124 0.0925 0.354 CD8_TCM L2
ENSG00000139372 TDG -809669 sc-eQTL 2.16e-01 -0.113 0.0912 0.354 CD8_TCM L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 9.93e-02 0.143 0.0866 0.354 CD8_TCM L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 5.69e-01 -0.0488 0.0855 0.354 CD8_TCM L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 6.75e-01 0.0398 0.0947 0.354 CD8_TCM L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 5.74e-02 -0.166 0.0867 0.345 CD8_TEM L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 4.64e-01 0.0697 0.095 0.345 CD8_TEM L2
ENSG00000120837 NFYB -982088 sc-eQTL 3.33e-02 -0.192 0.0898 0.345 CD8_TEM L2
ENSG00000139372 TDG -809669 sc-eQTL 2.17e-01 -0.12 0.0969 0.345 CD8_TEM L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 4.05e-01 0.0755 0.0905 0.345 CD8_TEM L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 1.75e-01 0.123 0.0906 0.345 CD8_TEM L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 7.09e-01 0.0349 0.0932 0.345 CD8_TEM L2
ENSG00000017427 IGF1 674409 sc-eQTL 9.28e-01 -0.00286 0.0315 0.346 MAIT L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 2.07e-01 0.111 0.0876 0.346 MAIT L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 9.05e-01 0.0108 0.0902 0.346 MAIT L2
ENSG00000120837 NFYB -982088 sc-eQTL 3.94e-01 0.0747 0.0875 0.346 MAIT L2
ENSG00000139372 TDG -809669 sc-eQTL 8.69e-01 -0.0157 0.0948 0.346 MAIT L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 5.76e-01 0.0514 0.092 0.346 MAIT L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 1.00e+00 4.51e-05 0.0826 0.346 MAIT L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 4.51e-01 0.07 0.0927 0.346 MAIT L2
ENSG00000281344 HELLPAR 958568 sc-eQTL 8.58e-01 -0.0137 0.0764 0.346 MAIT L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 9.42e-02 0.151 0.0897 0.356 NK_CD56bright L2
ENSG00000120837 NFYB -982088 sc-eQTL 8.01e-01 0.0231 0.0915 0.356 NK_CD56bright L2
ENSG00000139372 TDG -809669 sc-eQTL 8.65e-01 0.0158 0.0931 0.356 NK_CD56bright L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 5.18e-01 0.0595 0.0918 0.356 NK_CD56bright L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 8.99e-01 -0.0124 0.0974 0.356 NK_CD56bright L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 6.19e-01 -0.0447 0.0899 0.351 NK_CD56dim L2
ENSG00000120837 NFYB -982088 sc-eQTL 2.33e-01 0.0959 0.0801 0.351 NK_CD56dim L2
ENSG00000139372 TDG -809669 sc-eQTL 3.29e-01 -0.0744 0.0761 0.351 NK_CD56dim L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 9.74e-01 0.00249 0.0764 0.351 NK_CD56dim L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 5.52e-01 0.0521 0.0875 0.351 NK_CD56dim L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 6.93e-01 -0.0387 0.0978 0.349 NK_HLA L2
ENSG00000120837 NFYB -982088 sc-eQTL 7.74e-01 0.0285 0.0993 0.349 NK_HLA L2
ENSG00000139372 TDG -809669 sc-eQTL 7.85e-01 -0.0267 0.098 0.349 NK_HLA L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 9.46e-01 -0.00657 0.0963 0.349 NK_HLA L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 3.30e-02 0.189 0.0881 0.349 NK_HLA L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 8.65e-03 -0.241 0.0907 0.351 NK_cytokine L2
ENSG00000120837 NFYB -982088 sc-eQTL 9.36e-01 -0.00644 0.08 0.351 NK_cytokine L2
ENSG00000139372 TDG -809669 sc-eQTL 2.09e-01 -0.103 0.0814 0.351 NK_cytokine L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 6.49e-01 -0.0369 0.0812 0.351 NK_cytokine L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 8.97e-01 -0.011 0.0849 0.351 NK_cytokine L2
ENSG00000017427 IGF1 674409 sc-eQTL 2.23e-01 -0.0812 0.0663 0.333 PB L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 6.76e-01 0.0439 0.105 0.333 PB L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 8.21e-01 -0.0203 0.0896 0.333 PB L2
ENSG00000120837 NFYB -982088 sc-eQTL 9.59e-01 0.0054 0.104 0.333 PB L2
ENSG00000139372 TDG -809669 sc-eQTL 9.17e-01 0.0112 0.107 0.333 PB L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 1.18e-01 0.0764 0.0485 0.333 PB L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 2.80e-01 -0.0928 0.0854 0.333 PB L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 3.05e-01 0.11 0.107 0.333 PB L2
ENSG00000281344 HELLPAR 958568 sc-eQTL 7.77e-01 -0.0231 0.0815 0.333 PB L2
ENSG00000017427 IGF1 674409 sc-eQTL 4.74e-01 -0.022 0.0307 0.348 Pro_T L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 1.13e-02 -0.194 0.0758 0.348 Pro_T L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 9.72e-01 -0.00297 0.0836 0.348 Pro_T L2
ENSG00000120837 NFYB -982088 sc-eQTL 4.45e-01 0.0662 0.0864 0.348 Pro_T L2
ENSG00000139372 TDG -809669 sc-eQTL 4.14e-01 0.067 0.0818 0.348 Pro_T L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 9.60e-02 -0.0953 0.057 0.348 Pro_T L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 7.51e-01 0.025 0.0787 0.348 Pro_T L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 1.36e-01 0.121 0.0805 0.348 Pro_T L2
ENSG00000281344 HELLPAR 958568 sc-eQTL 9.22e-01 -0.0061 0.062 0.348 Pro_T L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 3.84e-01 -0.0722 0.0828 0.348 Treg L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 5.85e-01 -0.0519 0.095 0.348 Treg L2
ENSG00000120837 NFYB -982088 sc-eQTL 6.53e-01 -0.0379 0.0843 0.348 Treg L2
ENSG00000139372 TDG -809669 sc-eQTL 3.81e-01 0.0817 0.0931 0.348 Treg L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 5.23e-01 0.0552 0.0861 0.348 Treg L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 1.83e-01 -0.0984 0.0737 0.348 Treg L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 3.62e-02 -0.194 0.0921 0.348 Treg L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 2.70e-01 0.108 0.0972 0.363 cDC L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 6.91e-02 -0.154 0.0845 0.363 cDC L2
ENSG00000120837 NFYB -982088 sc-eQTL 6.56e-01 -0.0407 0.0912 0.363 cDC L2
ENSG00000139372 TDG -809669 sc-eQTL 2.05e-01 0.119 0.0934 0.363 cDC L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 8.81e-01 0.0125 0.0831 0.363 cDC L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 2.97e-01 -0.0647 0.0618 0.363 cDC L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 9.74e-01 0.0028 0.0865 0.363 cDC L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 1.50e-01 -0.123 0.0853 0.348 cMono_IL1B L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 7.90e-01 -0.0232 0.0874 0.348 cMono_IL1B L2
ENSG00000120837 NFYB -982088 sc-eQTL 9.16e-02 -0.15 0.0884 0.348 cMono_IL1B L2
ENSG00000139372 TDG -809669 sc-eQTL 3.70e-01 0.0612 0.0682 0.348 cMono_IL1B L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 5.71e-01 0.0375 0.0661 0.348 cMono_IL1B L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 7.45e-01 -0.0259 0.0793 0.348 cMono_IL1B L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 5.92e-01 -0.0469 0.0874 0.348 cMono_S100A L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 7.35e-01 0.0309 0.0912 0.348 cMono_S100A L2
ENSG00000120837 NFYB -982088 sc-eQTL 7.64e-01 0.0254 0.0848 0.348 cMono_S100A L2
ENSG00000139372 TDG -809669 sc-eQTL 2.77e-01 0.0847 0.0777 0.348 cMono_S100A L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 6.67e-01 0.0295 0.0685 0.348 cMono_S100A L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 1.34e-01 -0.13 0.0861 0.348 cMono_S100A L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 9.66e-01 0.00429 0.101 0.361 gdT L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 1.58e-01 0.147 0.104 0.361 gdT L2
ENSG00000120837 NFYB -982088 sc-eQTL 7.26e-01 -0.035 0.0996 0.361 gdT L2
ENSG00000139372 TDG -809669 sc-eQTL 9.50e-01 0.00626 0.101 0.361 gdT L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 5.08e-01 -0.0703 0.106 0.361 gdT L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 4.97e-01 -0.0676 0.0993 0.361 gdT L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 6.99e-01 0.0392 0.101 0.361 gdT L2
ENSG00000281344 HELLPAR 958568 sc-eQTL 1.34e-01 -0.136 0.0902 0.361 gdT L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 4.46e-01 -0.0644 0.0843 0.347 intMono L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 6.20e-02 -0.166 0.0886 0.347 intMono L2
ENSG00000120837 NFYB -982088 sc-eQTL 5.71e-02 0.177 0.0925 0.347 intMono L2
ENSG00000139372 TDG -809669 sc-eQTL 3.64e-01 -0.0793 0.0871 0.347 intMono L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 6.49e-01 0.0355 0.0779 0.347 intMono L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 3.45e-02 -0.168 0.079 0.347 intMono L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 5.58e-01 0.0524 0.0894 0.353 ncMono L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 2.11e-01 -0.112 0.0892 0.353 ncMono L2
ENSG00000120837 NFYB -982088 sc-eQTL 9.42e-01 -0.00664 0.0904 0.353 ncMono L2
ENSG00000139372 TDG -809669 sc-eQTL 7.62e-01 0.0266 0.0877 0.353 ncMono L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 4.62e-01 0.0574 0.0778 0.353 ncMono L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 2.82e-01 -0.0947 0.0878 0.353 ncMono L2
ENSG00000111696 NT5DC3 -685081 sc-eQTL 9.44e-01 0.00608 0.0865 0.37 pDC L2
ENSG00000111727 HCFC2 -908378 sc-eQTL 5.37e-01 0.0605 0.0978 0.37 pDC L2
ENSG00000120837 NFYB -982088 sc-eQTL 5.17e-02 0.198 0.101 0.37 pDC L2
ENSG00000139372 TDG -809669 sc-eQTL 1.47e-01 -0.126 0.0864 0.37 pDC L2
ENSG00000166598 HSP90B1 -773954 sc-eQTL 7.21e-01 0.0243 0.068 0.37 pDC L2
ENSG00000179088 C12orf42 -339857 sc-eQTL 2.84e-01 0.095 0.0883 0.37 pDC L2
ENSG00000204954 C12orf73 -809555 sc-eQTL 3.32e-01 0.082 0.0844 0.37 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 674409 sc-eQTL 9.49e-02 0.0731 0.0436 0.348 B_Memory LOneK1K
ENSG00000111696 NT5DC3 -685081 sc-eQTL 6.93e-01 0.0339 0.0858 0.348 B_Memory LOneK1K
ENSG00000111727 HCFC2 -908378 sc-eQTL 2.65e-01 0.103 0.092 0.348 B_Memory LOneK1K
ENSG00000120837 NFYB -982088 sc-eQTL 2.58e-01 0.0957 0.0843 0.348 B_Memory LOneK1K
ENSG00000139372 TDG -809669 sc-eQTL 3.78e-01 -0.0789 0.0893 0.348 B_Memory LOneK1K
ENSG00000166598 HSP90B1 -773954 sc-eQTL 9.79e-01 -0.00215 0.08 0.348 B_Memory LOneK1K
ENSG00000179088 C12orf42 -339857 sc-eQTL 4.67e-01 0.0498 0.0684 0.348 B_Memory LOneK1K
ENSG00000204954 C12orf73 -809555 sc-eQTL 3.78e-01 -0.0819 0.0928 0.348 B_Memory LOneK1K
ENSG00000281344 HELLPAR 958568 sc-eQTL 5.31e-01 -0.0569 0.0907 0.348 B_Memory LOneK1K
ENSG00000017427 IGF1 674409 sc-eQTL 9.65e-01 0.00223 0.0505 0.348 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -685081 sc-eQTL 4.64e-01 0.0624 0.085 0.348 B_Naive LOneK1K
ENSG00000111727 HCFC2 -908378 sc-eQTL 6.73e-01 -0.0388 0.0918 0.348 B_Naive LOneK1K
ENSG00000120837 NFYB -982088 sc-eQTL 1.15e-01 -0.132 0.0833 0.348 B_Naive LOneK1K
ENSG00000139372 TDG -809669 sc-eQTL 8.57e-01 -0.0141 0.0782 0.348 B_Naive LOneK1K
ENSG00000166598 HSP90B1 -773954 sc-eQTL 5.30e-02 -0.138 0.0709 0.348 B_Naive LOneK1K
ENSG00000179088 C12orf42 -339857 sc-eQTL 5.76e-01 0.0492 0.0877 0.348 B_Naive LOneK1K
ENSG00000204954 C12orf73 -809555 sc-eQTL 4.75e-01 0.0651 0.091 0.348 B_Naive LOneK1K
ENSG00000281344 HELLPAR 958568 sc-eQTL 5.70e-01 -0.0487 0.0856 0.348 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -685081 sc-eQTL 3.30e-01 -0.0857 0.0878 0.348 CD14_Mono LOneK1K
ENSG00000111727 HCFC2 -908378 sc-eQTL 8.88e-01 0.0126 0.0901 0.348 CD14_Mono LOneK1K
ENSG00000120837 NFYB -982088 sc-eQTL 1.04e-01 -0.135 0.083 0.348 CD14_Mono LOneK1K
ENSG00000139372 TDG -809669 sc-eQTL 2.37e-01 0.0738 0.0622 0.348 CD14_Mono LOneK1K
ENSG00000166598 HSP90B1 -773954 sc-eQTL 3.71e-01 0.0549 0.0611 0.348 CD14_Mono LOneK1K
ENSG00000204954 C12orf73 -809555 sc-eQTL 1.79e-01 -0.104 0.0776 0.348 CD14_Mono LOneK1K
ENSG00000111696 NT5DC3 -685081 sc-eQTL 7.95e-01 0.0232 0.0892 0.349 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -908378 sc-eQTL 8.66e-02 -0.149 0.0867 0.349 CD16_Mono LOneK1K
ENSG00000120837 NFYB -982088 sc-eQTL 3.53e-01 0.0797 0.0856 0.349 CD16_Mono LOneK1K
ENSG00000139372 TDG -809669 sc-eQTL 7.34e-01 -0.0283 0.083 0.349 CD16_Mono LOneK1K
ENSG00000166598 HSP90B1 -773954 sc-eQTL 5.18e-01 0.0536 0.0828 0.349 CD16_Mono LOneK1K
ENSG00000204954 C12orf73 -809555 sc-eQTL 2.42e-02 -0.192 0.0844 0.349 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -908378 sc-eQTL 1.97e-02 -0.195 0.0832 0.351 NK_CD56dim LOneK1K
ENSG00000120837 NFYB -982088 sc-eQTL 3.90e-01 0.0639 0.0742 0.351 NK_CD56dim LOneK1K
ENSG00000139372 TDG -809669 sc-eQTL 2.07e-01 -0.0924 0.073 0.351 NK_CD56dim LOneK1K
ENSG00000166598 HSP90B1 -773954 sc-eQTL 9.17e-01 0.008 0.0771 0.351 NK_CD56dim LOneK1K
ENSG00000204954 C12orf73 -809555 sc-eQTL 3.39e-01 0.0773 0.0808 0.351 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000120837 \N -982088 2.67e-07 1.3e-07 5.35e-08 1.81e-07 9.79e-08 9.9e-08 1.61e-07 5.53e-08 1.45e-07 5.67e-08 1.52e-07 1.01e-07 1.52e-07 7.13e-08 6.12e-08 7.5e-08 4.01e-08 1.4e-07 6.07e-08 4.31e-08 1.22e-07 1.24e-07 1.45e-07 2.93e-08 1.5e-07 1.26e-07 1.1e-07 9.74e-08 1.2e-07 1.07e-07 9.92e-08 3.66e-08 3.89e-08 8.11e-08 6.67e-08 3.2e-08 4.99e-08 9.36e-08 6.55e-08 3.86e-08 5.43e-08 1.36e-07 5.2e-08 1.45e-08 4.7e-08 1.84e-08 1.21e-07 3.79e-09 5.02e-08