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Genes within 1Mb (chr12:103154702:T:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 672958 sc-eQTL 1.75e-01 -0.0516 0.0379 0.34 B L1
ENSG00000111696 NT5DC3 -686532 sc-eQTL 9.55e-01 -0.00473 0.0835 0.34 B L1
ENSG00000111727 HCFC2 -909829 sc-eQTL 7.96e-01 -0.0201 0.0778 0.34 B L1
ENSG00000120837 NFYB -983539 sc-eQTL 6.16e-01 -0.0377 0.075 0.34 B L1
ENSG00000139372 TDG -811120 sc-eQTL 7.60e-01 -0.0229 0.0749 0.34 B L1
ENSG00000166598 HSP90B1 -775405 sc-eQTL 9.79e-02 -0.0777 0.0467 0.34 B L1
ENSG00000179088 C12orf42 -341308 sc-eQTL 6.02e-01 0.0366 0.0702 0.34 B L1
ENSG00000204954 C12orf73 -811006 sc-eQTL 4.40e-01 0.0625 0.0808 0.34 B L1
ENSG00000281344 HELLPAR 957117 sc-eQTL 1.08e-01 -0.118 0.0729 0.34 B L1
ENSG00000111696 NT5DC3 -686532 sc-eQTL 7.06e-01 0.0271 0.0718 0.34 CD4T L1
ENSG00000111727 HCFC2 -909829 sc-eQTL 3.67e-01 -0.0651 0.072 0.34 CD4T L1
ENSG00000120837 NFYB -983539 sc-eQTL 1.08e-01 0.0996 0.0617 0.34 CD4T L1
ENSG00000139372 TDG -811120 sc-eQTL 8.78e-01 -0.0098 0.0639 0.34 CD4T L1
ENSG00000166598 HSP90B1 -775405 sc-eQTL 8.84e-02 0.117 0.0686 0.34 CD4T L1
ENSG00000179088 C12orf42 -341308 sc-eQTL 7.69e-01 0.0234 0.0796 0.34 CD4T L1
ENSG00000204954 C12orf73 -811006 sc-eQTL 6.21e-01 0.0339 0.0686 0.34 CD4T L1
ENSG00000111696 NT5DC3 -686532 sc-eQTL 3.98e-01 0.0628 0.0741 0.34 CD8T L1
ENSG00000111727 HCFC2 -909829 sc-eQTL 1.93e-01 -0.104 0.0799 0.34 CD8T L1
ENSG00000120837 NFYB -983539 sc-eQTL 7.70e-01 -0.0221 0.0753 0.34 CD8T L1
ENSG00000139372 TDG -811120 sc-eQTL 8.42e-01 -0.0135 0.0678 0.34 CD8T L1
ENSG00000166598 HSP90B1 -775405 sc-eQTL 2.17e-01 0.0885 0.0715 0.34 CD8T L1
ENSG00000179088 C12orf42 -341308 sc-eQTL 2.99e-01 0.0901 0.0865 0.34 CD8T L1
ENSG00000204954 C12orf73 -811006 sc-eQTL 8.94e-01 -0.011 0.0826 0.34 CD8T L1
ENSG00000111696 NT5DC3 -686532 sc-eQTL 5.52e-01 0.0523 0.0879 0.349 DC L1
ENSG00000111727 HCFC2 -909829 sc-eQTL 6.21e-01 -0.0467 0.0942 0.349 DC L1
ENSG00000120837 NFYB -983539 sc-eQTL 5.98e-01 0.0446 0.0844 0.349 DC L1
ENSG00000139372 TDG -811120 sc-eQTL 4.20e-01 0.0697 0.0862 0.349 DC L1
ENSG00000166598 HSP90B1 -775405 sc-eQTL 5.25e-01 -0.0361 0.0567 0.349 DC L1
ENSG00000179088 C12orf42 -341308 sc-eQTL 5.75e-01 0.0416 0.0742 0.349 DC L1
ENSG00000204954 C12orf73 -811006 sc-eQTL 9.43e-01 -0.00641 0.0894 0.349 DC L1
ENSG00000111696 NT5DC3 -686532 sc-eQTL 2.43e-01 -0.107 0.0918 0.34 Mono L1
ENSG00000111727 HCFC2 -909829 sc-eQTL 2.94e-01 -0.0889 0.0846 0.34 Mono L1
ENSG00000120837 NFYB -983539 sc-eQTL 3.24e-01 -0.0782 0.0791 0.34 Mono L1
ENSG00000139372 TDG -811120 sc-eQTL 2.64e-01 0.0679 0.0607 0.34 Mono L1
ENSG00000166598 HSP90B1 -775405 sc-eQTL 2.25e-01 0.0739 0.0607 0.34 Mono L1
ENSG00000204954 C12orf73 -811006 sc-eQTL 1.57e-01 -0.111 0.0779 0.34 Mono L1
ENSG00000111727 HCFC2 -909829 sc-eQTL 9.80e-02 -0.136 0.082 0.341 NK L1
ENSG00000120837 NFYB -983539 sc-eQTL 4.53e-01 0.0571 0.076 0.341 NK L1
ENSG00000139372 TDG -811120 sc-eQTL 4.02e-01 -0.0593 0.0707 0.341 NK L1
ENSG00000166598 HSP90B1 -775405 sc-eQTL 5.33e-01 0.0489 0.0783 0.341 NK L1
ENSG00000204954 C12orf73 -811006 sc-eQTL 1.98e-01 0.101 0.0779 0.341 NK L1
ENSG00000017427 IGF1 672958 sc-eQTL 7.46e-01 0.00932 0.0287 0.34 Other_T L1
ENSG00000111696 NT5DC3 -686532 sc-eQTL 3.32e-01 -0.0798 0.0821 0.34 Other_T L1
ENSG00000111727 HCFC2 -909829 sc-eQTL 9.86e-01 -0.00147 0.0839 0.34 Other_T L1
ENSG00000120837 NFYB -983539 sc-eQTL 7.19e-01 -0.0274 0.0761 0.34 Other_T L1
ENSG00000139372 TDG -811120 sc-eQTL 9.46e-01 -0.00495 0.0731 0.34 Other_T L1
ENSG00000166598 HSP90B1 -775405 sc-eQTL 8.67e-01 -0.0111 0.0662 0.34 Other_T L1
ENSG00000179088 C12orf42 -341308 sc-eQTL 7.82e-01 -0.023 0.0831 0.34 Other_T L1
ENSG00000204954 C12orf73 -811006 sc-eQTL 1.24e-01 0.131 0.0851 0.34 Other_T L1
ENSG00000281344 HELLPAR 957117 sc-eQTL 3.34e-01 0.0656 0.0677 0.34 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 672958 sc-eQTL 3.35e-01 0.0175 0.0181 0.344 B_Activated L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 7.67e-01 -0.0251 0.0843 0.344 B_Activated L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 7.58e-01 -0.0287 0.0927 0.344 B_Activated L2
ENSG00000120837 NFYB -983539 sc-eQTL 6.14e-01 -0.0505 0.1 0.344 B_Activated L2
ENSG00000139372 TDG -811120 sc-eQTL 2.39e-01 -0.118 0.0996 0.344 B_Activated L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 4.89e-01 -0.0747 0.108 0.344 B_Activated L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 1.85e-02 -0.193 0.0811 0.344 B_Activated L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 1.94e-01 -0.118 0.0901 0.344 B_Activated L2
ENSG00000281344 HELLPAR 957117 sc-eQTL 6.46e-01 -0.0338 0.0734 0.344 B_Activated L2
ENSG00000017427 IGF1 672958 sc-eQTL 5.86e-01 0.021 0.0385 0.337 B_Intermediate L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 7.78e-01 0.0245 0.0868 0.337 B_Intermediate L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 5.93e-01 -0.0485 0.0906 0.337 B_Intermediate L2
ENSG00000120837 NFYB -983539 sc-eQTL 1.51e-01 0.138 0.096 0.337 B_Intermediate L2
ENSG00000139372 TDG -811120 sc-eQTL 3.60e-01 -0.0888 0.0968 0.337 B_Intermediate L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 2.99e-01 0.0901 0.0866 0.337 B_Intermediate L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 2.02e-01 0.108 0.0844 0.337 B_Intermediate L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 5.23e-01 -0.0587 0.0917 0.337 B_Intermediate L2
ENSG00000281344 HELLPAR 957117 sc-eQTL 2.28e-01 -0.108 0.089 0.337 B_Intermediate L2
ENSG00000017427 IGF1 672958 sc-eQTL 1.67e-01 0.0483 0.0349 0.343 B_Memory L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 8.22e-01 -0.0199 0.0883 0.343 B_Memory L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 3.50e-01 0.0889 0.095 0.343 B_Memory L2
ENSG00000120837 NFYB -983539 sc-eQTL 6.30e-01 0.0453 0.0939 0.343 B_Memory L2
ENSG00000139372 TDG -811120 sc-eQTL 5.49e-01 -0.0575 0.0958 0.343 B_Memory L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 3.24e-01 -0.0836 0.0846 0.343 B_Memory L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 5.85e-01 0.0478 0.0875 0.343 B_Memory L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 2.42e-01 -0.109 0.0931 0.343 B_Memory L2
ENSG00000281344 HELLPAR 957117 sc-eQTL 8.84e-01 0.0119 0.0811 0.343 B_Memory L2
ENSG00000017427 IGF1 672958 sc-eQTL 6.91e-01 -0.0191 0.0479 0.34 B_Naive1 L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 3.63e-01 0.0775 0.085 0.34 B_Naive1 L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 5.12e-01 -0.0613 0.0933 0.34 B_Naive1 L2
ENSG00000120837 NFYB -983539 sc-eQTL 9.44e-01 -0.00624 0.0887 0.34 B_Naive1 L2
ENSG00000139372 TDG -811120 sc-eQTL 7.20e-01 0.0296 0.0822 0.34 B_Naive1 L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 8.84e-02 -0.119 0.0697 0.34 B_Naive1 L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 4.77e-01 0.0646 0.0908 0.34 B_Naive1 L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 5.25e-01 0.0571 0.0897 0.34 B_Naive1 L2
ENSG00000281344 HELLPAR 957117 sc-eQTL 7.12e-01 0.0317 0.0858 0.34 B_Naive1 L2
ENSG00000017427 IGF1 672958 sc-eQTL 5.05e-01 -0.0287 0.0429 0.341 B_Naive2 L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 6.65e-01 -0.0399 0.0921 0.341 B_Naive2 L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 4.42e-01 0.0748 0.0971 0.341 B_Naive2 L2
ENSG00000120837 NFYB -983539 sc-eQTL 5.96e-02 -0.177 0.0936 0.341 B_Naive2 L2
ENSG00000139372 TDG -811120 sc-eQTL 5.19e-01 -0.0556 0.0862 0.341 B_Naive2 L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 5.60e-01 -0.0511 0.0875 0.341 B_Naive2 L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 7.76e-01 -0.0259 0.091 0.341 B_Naive2 L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 1.22e-01 0.148 0.0954 0.341 B_Naive2 L2
ENSG00000281344 HELLPAR 957117 sc-eQTL 5.79e-01 -0.0466 0.0839 0.341 B_Naive2 L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 7.17e-01 0.0297 0.082 0.336 CD4_CTL L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 3.10e-01 0.0946 0.0929 0.336 CD4_CTL L2
ENSG00000120837 NFYB -983539 sc-eQTL 9.95e-01 -0.000628 0.0927 0.336 CD4_CTL L2
ENSG00000139372 TDG -811120 sc-eQTL 8.89e-01 -0.0137 0.0975 0.336 CD4_CTL L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 1.04e-01 0.134 0.0822 0.336 CD4_CTL L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 6.18e-01 0.0422 0.0846 0.336 CD4_CTL L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 4.90e-01 -0.0632 0.0914 0.336 CD4_CTL L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 1.78e-01 0.0999 0.074 0.34 CD4_Naive L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 1.18e-01 -0.121 0.077 0.34 CD4_Naive L2
ENSG00000120837 NFYB -983539 sc-eQTL 1.43e-02 0.162 0.0655 0.34 CD4_Naive L2
ENSG00000139372 TDG -811120 sc-eQTL 5.42e-01 -0.0411 0.0672 0.34 CD4_Naive L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 1.00e-01 0.113 0.0681 0.34 CD4_Naive L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 8.17e-01 0.0191 0.0824 0.34 CD4_Naive L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 4.34e-01 0.0588 0.075 0.34 CD4_Naive L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 2.90e-01 -0.0919 0.0865 0.34 CD4_TCM L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 9.47e-01 0.00616 0.0923 0.34 CD4_TCM L2
ENSG00000120837 NFYB -983539 sc-eQTL 9.75e-01 0.00258 0.0829 0.34 CD4_TCM L2
ENSG00000139372 TDG -811120 sc-eQTL 5.82e-01 -0.0413 0.075 0.34 CD4_TCM L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 7.19e-01 0.0266 0.0739 0.34 CD4_TCM L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 4.62e-01 -0.0631 0.0856 0.34 CD4_TCM L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 4.82e-01 0.0597 0.0847 0.34 CD4_TCM L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 1.92e-01 -0.121 0.0923 0.34 CD4_TEM L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 5.59e-01 0.0553 0.0945 0.34 CD4_TEM L2
ENSG00000120837 NFYB -983539 sc-eQTL 7.52e-01 -0.0285 0.0901 0.34 CD4_TEM L2
ENSG00000139372 TDG -811120 sc-eQTL 4.55e-01 -0.0668 0.0892 0.34 CD4_TEM L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 4.24e-02 0.179 0.0879 0.34 CD4_TEM L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 8.80e-01 -0.014 0.0924 0.34 CD4_TEM L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 2.97e-01 0.0933 0.0893 0.34 CD4_TEM L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 4.61e-01 0.0606 0.0822 0.34 CD8_CTL L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 7.64e-01 -0.0279 0.0927 0.34 CD8_CTL L2
ENSG00000120837 NFYB -983539 sc-eQTL 9.70e-02 -0.145 0.0869 0.34 CD8_CTL L2
ENSG00000139372 TDG -811120 sc-eQTL 8.06e-01 -0.0214 0.087 0.34 CD8_CTL L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 3.01e-01 0.0791 0.0763 0.34 CD8_CTL L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 8.63e-01 -0.0155 0.0898 0.34 CD8_CTL L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 1.66e-01 0.115 0.0825 0.34 CD8_CTL L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 7.39e-01 0.0287 0.0862 0.34 CD8_Naive L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 1.52e-01 -0.135 0.0941 0.34 CD8_Naive L2
ENSG00000120837 NFYB -983539 sc-eQTL 9.81e-01 -0.0021 0.0875 0.34 CD8_Naive L2
ENSG00000139372 TDG -811120 sc-eQTL 6.08e-01 0.0404 0.0785 0.34 CD8_Naive L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 8.55e-01 0.0137 0.0748 0.34 CD8_Naive L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 2.49e-01 0.103 0.0892 0.34 CD8_Naive L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 7.16e-01 -0.0316 0.0868 0.34 CD8_Naive L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 7.27e-01 0.0294 0.0841 0.345 CD8_TCM L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 6.59e-01 0.0414 0.0936 0.345 CD8_TCM L2
ENSG00000120837 NFYB -983539 sc-eQTL 1.68e-01 0.13 0.0938 0.345 CD8_TCM L2
ENSG00000139372 TDG -811120 sc-eQTL 3.04e-01 -0.0955 0.0926 0.345 CD8_TCM L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 1.08e-01 0.142 0.0879 0.345 CD8_TCM L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 4.93e-01 -0.0596 0.0867 0.345 CD8_TCM L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 5.64e-01 0.0555 0.0961 0.345 CD8_TCM L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 7.41e-02 -0.159 0.0883 0.336 CD8_TEM L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 5.39e-01 0.0595 0.0967 0.336 CD8_TEM L2
ENSG00000120837 NFYB -983539 sc-eQTL 4.28e-02 -0.186 0.0915 0.336 CD8_TEM L2
ENSG00000139372 TDG -811120 sc-eQTL 1.15e-01 -0.156 0.0983 0.336 CD8_TEM L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 3.14e-01 0.093 0.092 0.336 CD8_TEM L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 2.89e-01 0.0981 0.0924 0.336 CD8_TEM L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 7.76e-01 0.027 0.0949 0.336 CD8_TEM L2
ENSG00000017427 IGF1 672958 sc-eQTL 9.21e-01 -0.0032 0.0321 0.338 MAIT L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 1.34e-01 0.134 0.0891 0.338 MAIT L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 9.86e-01 0.00161 0.0918 0.338 MAIT L2
ENSG00000120837 NFYB -983539 sc-eQTL 5.73e-01 0.0504 0.0892 0.338 MAIT L2
ENSG00000139372 TDG -811120 sc-eQTL 9.72e-01 -0.00338 0.0965 0.338 MAIT L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 5.05e-01 0.0624 0.0936 0.338 MAIT L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 8.37e-01 0.0173 0.084 0.338 MAIT L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 4.24e-01 0.0756 0.0943 0.338 MAIT L2
ENSG00000281344 HELLPAR 957117 sc-eQTL 9.34e-01 0.00643 0.0778 0.338 MAIT L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 1.32e-01 0.138 0.0911 0.347 NK_CD56bright L2
ENSG00000120837 NFYB -983539 sc-eQTL 9.49e-01 0.00591 0.0928 0.347 NK_CD56bright L2
ENSG00000139372 TDG -811120 sc-eQTL 9.53e-01 -0.00558 0.0944 0.347 NK_CD56bright L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 4.52e-01 0.0702 0.0931 0.347 NK_CD56bright L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 8.18e-01 -0.0228 0.0988 0.347 NK_CD56bright L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 5.79e-01 -0.0506 0.0912 0.343 NK_CD56dim L2
ENSG00000120837 NFYB -983539 sc-eQTL 4.72e-01 0.0587 0.0814 0.343 NK_CD56dim L2
ENSG00000139372 TDG -811120 sc-eQTL 4.87e-01 -0.0538 0.0773 0.343 NK_CD56dim L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 6.55e-01 0.0347 0.0774 0.343 NK_CD56dim L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 3.70e-01 0.0797 0.0887 0.343 NK_CD56dim L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 8.86e-01 -0.0143 0.0996 0.34 NK_HLA L2
ENSG00000120837 NFYB -983539 sc-eQTL 8.71e-01 0.0165 0.101 0.34 NK_HLA L2
ENSG00000139372 TDG -811120 sc-eQTL 9.35e-01 -0.00813 0.0999 0.34 NK_HLA L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 9.04e-01 -0.0118 0.0981 0.34 NK_HLA L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 1.69e-02 0.216 0.0895 0.34 NK_HLA L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 7.98e-03 -0.246 0.0919 0.343 NK_cytokine L2
ENSG00000120837 NFYB -983539 sc-eQTL 8.98e-01 -0.0104 0.0811 0.343 NK_cytokine L2
ENSG00000139372 TDG -811120 sc-eQTL 2.42e-01 -0.097 0.0825 0.343 NK_cytokine L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 8.47e-01 -0.0159 0.0823 0.343 NK_cytokine L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 8.48e-01 -0.0165 0.086 0.343 NK_cytokine L2
ENSG00000017427 IGF1 672958 sc-eQTL 2.52e-01 -0.0771 0.067 0.326 PB L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 6.84e-01 0.0431 0.106 0.326 PB L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 6.83e-01 -0.037 0.0904 0.326 PB L2
ENSG00000120837 NFYB -983539 sc-eQTL 8.99e-01 0.0134 0.105 0.326 PB L2
ENSG00000139372 TDG -811120 sc-eQTL 8.52e-01 0.0202 0.108 0.326 PB L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 8.93e-02 0.0838 0.0489 0.326 PB L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 3.32e-01 -0.0841 0.0864 0.326 PB L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 2.48e-01 0.125 0.107 0.326 PB L2
ENSG00000281344 HELLPAR 957117 sc-eQTL 8.10e-01 -0.0198 0.0823 0.326 PB L2
ENSG00000017427 IGF1 672958 sc-eQTL 5.49e-01 -0.0187 0.0311 0.339 Pro_T L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 4.36e-03 -0.221 0.0766 0.339 Pro_T L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 9.75e-01 -0.00269 0.0849 0.339 Pro_T L2
ENSG00000120837 NFYB -983539 sc-eQTL 5.89e-01 0.0475 0.0877 0.339 Pro_T L2
ENSG00000139372 TDG -811120 sc-eQTL 3.05e-01 0.0853 0.083 0.339 Pro_T L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 5.71e-02 -0.11 0.0577 0.339 Pro_T L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 5.74e-01 0.0449 0.0798 0.339 Pro_T L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 8.83e-02 0.14 0.0816 0.339 Pro_T L2
ENSG00000281344 HELLPAR 957117 sc-eQTL 9.05e-01 0.00751 0.0629 0.339 Pro_T L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 3.74e-01 -0.0747 0.084 0.34 Treg L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 7.43e-01 -0.0317 0.0964 0.34 Treg L2
ENSG00000120837 NFYB -983539 sc-eQTL 7.29e-01 -0.0297 0.0855 0.34 Treg L2
ENSG00000139372 TDG -811120 sc-eQTL 4.86e-01 0.0659 0.0945 0.34 Treg L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 8.06e-01 0.0215 0.0875 0.34 Treg L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 1.72e-01 -0.102 0.0747 0.34 Treg L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 2.53e-02 -0.21 0.0933 0.34 Treg L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 3.12e-01 0.0999 0.0986 0.354 cDC L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 1.10e-01 -0.138 0.0859 0.354 cDC L2
ENSG00000120837 NFYB -983539 sc-eQTL 7.31e-01 -0.0318 0.0926 0.354 cDC L2
ENSG00000139372 TDG -811120 sc-eQTL 1.37e-01 0.141 0.0946 0.354 cDC L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 8.73e-01 -0.0135 0.0843 0.354 cDC L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 3.92e-01 -0.0539 0.0627 0.354 cDC L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 8.99e-01 0.0112 0.0878 0.354 cDC L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 1.44e-01 -0.127 0.0866 0.34 cMono_IL1B L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 9.25e-01 -0.00836 0.0887 0.34 cMono_IL1B L2
ENSG00000120837 NFYB -983539 sc-eQTL 9.91e-02 -0.149 0.0898 0.34 cMono_IL1B L2
ENSG00000139372 TDG -811120 sc-eQTL 3.69e-01 0.0624 0.0692 0.34 cMono_IL1B L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 5.22e-01 0.043 0.0671 0.34 cMono_IL1B L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 9.34e-01 -0.00673 0.0805 0.34 cMono_IL1B L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 4.92e-01 -0.061 0.0886 0.34 cMono_S100A L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 7.72e-01 0.0269 0.0925 0.34 cMono_S100A L2
ENSG00000120837 NFYB -983539 sc-eQTL 7.73e-01 0.0249 0.086 0.34 cMono_S100A L2
ENSG00000139372 TDG -811120 sc-eQTL 2.22e-01 0.0966 0.0788 0.34 cMono_S100A L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 6.88e-01 0.0279 0.0695 0.34 cMono_S100A L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 1.31e-01 -0.132 0.0873 0.34 cMono_S100A L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 8.47e-01 0.0199 0.103 0.352 gdT L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 1.62e-01 0.148 0.106 0.352 gdT L2
ENSG00000120837 NFYB -983539 sc-eQTL 7.26e-01 -0.0356 0.102 0.352 gdT L2
ENSG00000139372 TDG -811120 sc-eQTL 8.82e-01 -0.0152 0.102 0.352 gdT L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 6.06e-01 -0.0559 0.108 0.352 gdT L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 4.60e-01 -0.0749 0.101 0.352 gdT L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 8.00e-01 0.0261 0.103 0.352 gdT L2
ENSG00000281344 HELLPAR 957117 sc-eQTL 1.70e-01 -0.127 0.0921 0.352 gdT L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 6.10e-01 -0.0439 0.086 0.338 intMono L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 6.46e-02 -0.168 0.0903 0.338 intMono L2
ENSG00000120837 NFYB -983539 sc-eQTL 5.17e-02 0.185 0.0943 0.338 intMono L2
ENSG00000139372 TDG -811120 sc-eQTL 6.05e-01 -0.0461 0.0889 0.338 intMono L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 7.92e-01 0.021 0.0794 0.338 intMono L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 4.41e-02 -0.163 0.0806 0.338 intMono L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 9.00e-01 0.0114 0.0909 0.344 ncMono L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 2.02e-01 -0.116 0.0906 0.344 ncMono L2
ENSG00000120837 NFYB -983539 sc-eQTL 9.40e-01 0.00686 0.0918 0.344 ncMono L2
ENSG00000139372 TDG -811120 sc-eQTL 6.70e-01 0.038 0.0891 0.344 ncMono L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 6.70e-01 0.0337 0.0791 0.344 ncMono L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 3.99e-01 -0.0755 0.0893 0.344 ncMono L2
ENSG00000111696 NT5DC3 -686532 sc-eQTL 7.90e-01 0.0235 0.0879 0.362 pDC L2
ENSG00000111727 HCFC2 -909829 sc-eQTL 6.55e-01 0.0446 0.0995 0.362 pDC L2
ENSG00000120837 NFYB -983539 sc-eQTL 5.52e-02 0.198 0.103 0.362 pDC L2
ENSG00000139372 TDG -811120 sc-eQTL 1.91e-01 -0.116 0.088 0.362 pDC L2
ENSG00000166598 HSP90B1 -775405 sc-eQTL 8.23e-01 0.0155 0.0691 0.362 pDC L2
ENSG00000179088 C12orf42 -341308 sc-eQTL 2.68e-01 0.0997 0.0897 0.362 pDC L2
ENSG00000204954 C12orf73 -811006 sc-eQTL 4.77e-01 0.0612 0.0859 0.362 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 672958 sc-eQTL 1.63e-01 0.0621 0.0443 0.34 B_Memory LOneK1K
ENSG00000111696 NT5DC3 -686532 sc-eQTL 9.09e-01 0.00998 0.0871 0.34 B_Memory LOneK1K
ENSG00000111727 HCFC2 -909829 sc-eQTL 4.75e-01 0.0669 0.0936 0.34 B_Memory LOneK1K
ENSG00000120837 NFYB -983539 sc-eQTL 1.80e-01 0.115 0.0854 0.34 B_Memory LOneK1K
ENSG00000139372 TDG -811120 sc-eQTL 3.87e-01 -0.0785 0.0906 0.34 B_Memory LOneK1K
ENSG00000166598 HSP90B1 -775405 sc-eQTL 7.91e-01 -0.0215 0.0812 0.34 B_Memory LOneK1K
ENSG00000179088 C12orf42 -341308 sc-eQTL 7.12e-01 0.0257 0.0695 0.34 B_Memory LOneK1K
ENSG00000204954 C12orf73 -811006 sc-eQTL 2.45e-01 -0.11 0.094 0.34 B_Memory LOneK1K
ENSG00000281344 HELLPAR 957117 sc-eQTL 5.90e-01 -0.0497 0.0921 0.34 B_Memory LOneK1K
ENSG00000017427 IGF1 672958 sc-eQTL 7.89e-01 -0.0137 0.0512 0.34 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -686532 sc-eQTL 7.35e-01 0.0293 0.0863 0.34 B_Naive LOneK1K
ENSG00000111727 HCFC2 -909829 sc-eQTL 7.29e-01 -0.0323 0.0932 0.34 B_Naive LOneK1K
ENSG00000120837 NFYB -983539 sc-eQTL 2.97e-01 -0.0887 0.0848 0.34 B_Naive LOneK1K
ENSG00000139372 TDG -811120 sc-eQTL 9.01e-01 0.00993 0.0794 0.34 B_Naive LOneK1K
ENSG00000166598 HSP90B1 -775405 sc-eQTL 7.30e-02 -0.13 0.072 0.34 B_Naive LOneK1K
ENSG00000179088 C12orf42 -341308 sc-eQTL 4.92e-01 0.0612 0.089 0.34 B_Naive LOneK1K
ENSG00000204954 C12orf73 -811006 sc-eQTL 2.68e-01 0.102 0.0922 0.34 B_Naive LOneK1K
ENSG00000281344 HELLPAR 957117 sc-eQTL 8.18e-01 -0.02 0.0869 0.34 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -686532 sc-eQTL 2.71e-01 -0.0985 0.0892 0.34 CD14_Mono LOneK1K
ENSG00000111727 HCFC2 -909829 sc-eQTL 8.47e-01 0.0177 0.0915 0.34 CD14_Mono LOneK1K
ENSG00000120837 NFYB -983539 sc-eQTL 1.14e-01 -0.134 0.0843 0.34 CD14_Mono LOneK1K
ENSG00000139372 TDG -811120 sc-eQTL 1.94e-01 0.0823 0.0632 0.34 CD14_Mono LOneK1K
ENSG00000166598 HSP90B1 -775405 sc-eQTL 3.58e-01 0.0572 0.0621 0.34 CD14_Mono LOneK1K
ENSG00000204954 C12orf73 -811006 sc-eQTL 2.55e-01 -0.0901 0.0789 0.34 CD14_Mono LOneK1K
ENSG00000111696 NT5DC3 -686532 sc-eQTL 9.04e-01 0.0109 0.0907 0.341 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -909829 sc-eQTL 7.70e-02 -0.156 0.088 0.341 CD16_Mono LOneK1K
ENSG00000120837 NFYB -983539 sc-eQTL 2.67e-01 0.0966 0.0869 0.341 CD16_Mono LOneK1K
ENSG00000139372 TDG -811120 sc-eQTL 9.94e-01 -0.000656 0.0843 0.341 CD16_Mono LOneK1K
ENSG00000166598 HSP90B1 -775405 sc-eQTL 6.13e-01 0.0426 0.0841 0.341 CD16_Mono LOneK1K
ENSG00000204954 C12orf73 -811006 sc-eQTL 5.01e-02 -0.169 0.086 0.341 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -909829 sc-eQTL 1.94e-02 -0.199 0.0844 0.343 NK_CD56dim LOneK1K
ENSG00000120837 NFYB -983539 sc-eQTL 6.44e-01 0.0349 0.0753 0.343 NK_CD56dim LOneK1K
ENSG00000139372 TDG -811120 sc-eQTL 2.95e-01 -0.0778 0.0741 0.343 NK_CD56dim LOneK1K
ENSG00000166598 HSP90B1 -775405 sc-eQTL 6.50e-01 0.0355 0.0781 0.343 NK_CD56dim LOneK1K
ENSG00000204954 C12orf73 -811006 sc-eQTL 2.49e-01 0.0945 0.0818 0.343 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000120837 \N -983539 2.67e-07 1.3e-07 4.48e-08 2.05e-07 9.25e-08 9.8e-08 1.61e-07 5.37e-08 1.44e-07 4.94e-08 1.57e-07 8.59e-08 1.41e-07 6.76e-08 5.91e-08 7.3e-08 3.94e-08 1.26e-07 5.97e-08 4.21e-08 1.13e-07 1.28e-07 1.44e-07 2.79e-08 1.5e-07 1.14e-07 1.07e-07 9.61e-08 1.09e-07 1.1e-07 9.7e-08 3.68e-08 3.56e-08 8.25e-08 7.02e-08 3.62e-08 4.95e-08 9.26e-08 6.54e-08 4.02e-08 4.64e-08 1.33e-07 4.52e-08 7.39e-09 3.84e-08 1.84e-08 1.19e-07 3.86e-09 4.9e-08